These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13564#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 2395 fasta sequence [GTGACCCTGACGAACAATTTGCTGCAGGGGCCGACGCCCAAATTTGCCGATAAGGTGAAAGCAGATGTGGTGCCGACTACGGAGCGGTTCTGCTTGAGCACCCCTGGACAACCTTGTGATCCCCGTGTAAACCTGCTGCTGGAGGTGGCGGCTGAGTTCCAGTACCCGGCGAAGCTCGCAGATAATTGGAAAGGGAATGATCCGTGTGATGGTTACATTGGTGTTGGATGCGATGCAGGGAACATTACAGTGCTGAATTTTGCCAGGATGGGGTTCAGTGGGAGCATCTCCCCAGCTATCGGGAAGATTACAACACTTCAGAAGCTTATTCTTGCAGACAACAATATTACTGGCACGGTGCCGAAGGAGGTTGCTGCTTTGCCTGCTCTGACGGAGGTTGATCTGTCGAATAACAATCTTTATGGGAAACTCCCTACCTTTGCAGCGAAGAATGTGCTGGTGAAAGCTAATGGCAACCCGAACATTGGCAAGGATGCTCCTGCACCGTCTGGATCAGGTGGTAGTGGCGGCAGCAATGCGCCAGATGGTGGGAATGGCGGTGATGGAAGCAAT-GGGAGTCCCTCTTCGTCTTCT-GCTGGAATCATTGCT-GGCTCAGTGGTTGGTGCTATTGCTGGAGTAGGCCTTCTTGCTGCATTAGGTTTCTATTGCTATAAAAGAAAACAGAAGCCTTTTGGAAGGGTTCAAAGTCCACACGCTATGGTTGTTCATCCTCGGCACTCAGGGTCAGATCCTGATATGGTTAAAATCACAGTTGCTGGTGGCAATGTCAATGGCGGTGCAGCTGCAAGTGAGACATACAGTCAAGCGAGCAGTGGTCCAAGGGATATTCATGTTGTTGAAACTGGAAATATGGTAATTTCAATTCAAGTCCTCCGCAATGTGACCAACAACTTCAGTGATGAGAATGTCCTTGGCCGTGGTGGCTTTGGCACTGTGTACAAGGGTGAGCTTCATGATGGCACAAAAATTGCTGTGAAGCGAATGGAGGCTGGTGTGATGGGTAACAAGGGGCTAAATGAGTTTAAATCAGAGATTGCTGTGCTGACCAAGGTTCGCCATCGGAACCTGGTGTCACTGCTTGGCTACTGTCTCGATGGCAATGAGAGGATTCTAGTGTATGAGTACATGCCACAGGGGACACTGAGTCAACACCTGTTTGAGTGGAAAGAACACAATCTGCGGCCGTTGGAATGGAAGAAGAGACTTAGCATTGCGCTTGATGTTGCAAGGGGTGTTGAGTATCTTCACAGCCTTGCACAGCAGACCTTCATCCACAGAGACTTGAAACCATCAAACATACTCCTCGGTGATGACATGAAGGCAAAGGTGGCAGACTTTGGATTGGTCCGGCTTGCACCGGCTGATGGGAAGTGCGTGTCAGTAGAGACAAGGCTTGCTGGCACTTTTGGATACCTTGCTCCGGAATATGCAGTTACTGGACGAGTAACAACAAAAGCAGATGTCTTCAGCTTTGGTGTCATCTTGATGGAGCTGATCACTGGACGCAAGGCGCTTGATGAGACTCAGCCTGAAGACAGCATGCACCTGGTAACATGGTTCCGAAGAATGCAACTTAGCAAAGACACATTCCAGAAAGCAATTGACCCAACAATTGACCTCACCGAGGAGACACTTGCAAGCGTTAGCACTGTCGCTGAGCTTGCTGGTCACTGCTGTGCTAGGGAACCACACCAGAGGCCTGATATGGGTCATGCTGTCAATGTGCTCTCTACTCTTTCGGATGTTTGGAAACCGTCTGATCCAGATTCAGATGACAGCTATGGTATCGATCTAGACATGACACTGCCGCAAGCATTGAAGAAATGGCAGGCCTTTGAGGATAGCAGCCATTTTGATGGCGCGACGTCTTCATTCCTTGCTAGCTTGGATAATACTCAGACAAGCATACCGACGAGGCCTCCAGGATTTGCAGAATCATTCACCTCTGCTGATGGAAGATAGGGTAG-CTTGTGTGAAATCTCAAGCTTGACGGAAGCAGAACATCCAAGTGATCCTTTTTGTTCATTCCTTTAGTCTCCTCACTCCCCTGCTTTTTAATGTTTCTTGGTTTGGCTATGTGCTGCCTTGTAGCTGTCCTTTGATCATGTATCTTGTGATCTTGACTCAAAGAATTGCCTGGAAGTTTGCAAATTTGCTAAC-GTTCTGTTCTGCCATATTTCTGAGCTTAAAACAGGAGCGGTGAAGGGCTGCTGGGCTGTATCAACACTACTCCCTGCTCCTTAACATCATCTCAGTTGTAGTCATTGTTGCTACTGTATTCTTTTAGTTCTATGATGATCATGATTGTACCAGAACCATCTCAATTATTGGAGACCGTGGTCAGGGCGTCAGGCCGTCTCCTAACTGTCAAAAT] [+] EMBL AK066295 [GTGACCCTGACGAACAATTTGCTGCAGGGGCCGACGCCCAAATTTGCCGATAAGGTGAAAGCAGATGTGGTGCCGACTACGGAGCGGTTCTGCTTGAGCACCCCTGGACAACCTTGTGATCCCCGTGTAAACCTGCTGCTGGAGGTGGCGGCTGAGTTCCAGTACCCGGCGAAGCTCGCAGATAATTGGAAAGGGAATGATCCGTGTGATGGTTACATTGGTGTTGGATGCGATGCAGGGAACATTACAGTGCTGAATTTTGCCAGGATGGGGTTCAGTGGGAGCATCTCCCCAGCTATCGGGAAGATTACAACACTTCAGAAGCTTATTCTTGCAGACAACAATATTACTGGCACGGTGCCGAAGGAGGTTGCTGCTTTGCCTGCTCTGACGGAGGTTGATCTGTCGAATAACAATCTTTATGGGAAACTCCCTACCTTTGCAGCGAAGAATGTGCTGGTGAAAGCTAATGGCAACCCGAACATTGGCAAGGATGCTCCTGCACCGTCTGGATCAGGTGGTAGTGGCGGCAGCAATGCGCCAGATGGTGGGAATGGCGGTGATGGAAGCAAT GGGAGTCCCTCTTCGTCTTCT GCTGGAATCATTGCT GGCTCAGTGGTTGGTGCTATTGCTGGAGTAGGCCTTCTTGCTGCATTAGGTTTCTATTGCTATAAAAGAAAACAGAAGCCTTTTGGAAGGGTTCAAAGTCCACACGCTATGGTTGTTCATCCTCGGCACTCAGGGTCAGATCCTGATATGGTTAAAATCACAGTTGCTGGTGGCAATGTCAATGGCGGTGCAGCTGCAAGTGAGACATACAGTCAAGCGAGCAGTGGTCCAAGGGATATTCATGTTGTTGAAACTGGAAATATGGTAATTTCAATTCAAGTCCTCCGCAATGTGACCAACAACTTCAGTGACGAGAATGTCCTTGGCCGTGGTGGCTTTGGCACTGTGTACAAGGGTGAGCTTCATGATGGCACAAAAATTGCTGTGAAGCGAATGGAGGCTGGTGTGATGGGTAACAAGGGGCTAAATGAGTTTAAATCAGAGATTGCTGTGCTGACCAAGGTTCGCCATCGGAACCTGGTGTCACTGCTTGGCTACTGTCTCGATGGCAATGAGAGGATTCTAGTGTATGAGTACATGCCACAGGGGACACTGAGTCAACACCTGTTTGAGTGGAAAGAACACAATCTGCGGCCGTTGGAATGGAAGAAGAGACTTAGCATTGCGCTTGATGTTGCAAGGGGTGTTGAGTATCTTCACAGCCTTGCACAGCAGACCTTCATCCACAGAGACTTGAAACCATCAAACATACTCCTCGGTGATGACATGAAGGCAAAGGTGGCAGACTTTGGATTGGTCCGGCTTGCACCGGCTGATGGGAAGTGCGTGTCAGTAGAGACAAGGCTTGCTGGCACTTTTGGATACCTTGCTCCGGAATATGCAGTTACTGGACGAGTAACAACAAAAGCAGATGTCTTCAGCTTTGGTGTCATCTTGATGGAGCTGATCACTGGACGCAAGGCGCTTGATGAGACTCAGCCTGAAGACAGCATGCACCTGGTAACATGGTTCCGAAGAATGCAACTTAGCAAAGACACATTCCAGAAAGCAATTGACCCAACAATTGACCTCACCGAGGAGACACTTGCAAGCGTTAGCACTGTCGCTGAGCTTGCTGGTCACTGCTGTGCTAGGGAACCACACCAGAGGCCTGATATGGGTCATGCTGTCAATGTGCTCTCTACTCTTTCGGATGTTTGGAAACCGTCTGATCCAGATTCAGATGACAGCTATGGTATCGATCTAGACATGACACTGCCGCAAGCATTGAAGAAATGGCAGGCCTTTGAGGATAGCAGCCATTTTGATGGCGCGACGTCTTCATTCCTTGCTAGCTTGGATAATACTCAGACAAGCATACCGACGAGGCCTCCAGGATTTGCAGAATCATTCACCTCTGCTGATGGAAGATAGGGTAG CTTGTGTGAAATCTCAAGCTTGACGGAAGCAGAACATCCAAGTGATCCTTTTTGTTCATTCCTTTAGTCTCCTCACTCCCCTGCTTTTTAATGTTTCTTGGTTTGGCTATGTGCTGCCTTGTAGCTGTCCTTTGATCATGTATCTTGTGATCTTGACTCAAAGAATTGCCTGGAAGTTTGCAAATTTGCTAACTGTTCTGTTCTGCCATAATTCTGAGCTTAAAACAGGAGCGGTGAAGGGCTGCTGGGCTGTATCAACACTACTCCCTGCTCCTTAACATCATCTCAGTTGTAGTCATTGTTGCTACTGTATTCTTTTAGTTCTATGATGATCATGATTGTACCAGAACCATCTCAATTATTGGAGACCGTGGTCAGGGCGTCAGGCCGTCTCCTAACTGTCAAAAT] [+] EMBL OSTMK [GTGACCCTGACGAACAATTTGCTGCAGGGGCCGACGCCCAAATTTGCCGATAAGGTGAAAGCAGATGTGGTGCCGACTACGGAGCGGTTCTGCTTGAGCACCCCTGGACAACCTTGTGATCCCCGTGTAAGCCTGCTGCTGGAGGTGGCGGCTGGGTTCCAGTACCCGGCGAAGCTCGCAGATAATTGGAAAGGGAATGATCCGTGTGATGGTTACATTGGTGTTGGATGCGATGCAGGGAACATTACAGTGCTGAATTTTGCCAGGATGGGGTTCAGTGGGAGCATCTCCCCAGCTATCGGGAAGATTACAACACTTCAGAAGCTTATTCTTGCAGACAACAATATTACTGGCACGGTGCCGAAGGAGGTTGCTGCTTTGCCTGCTCTGACGGAGGTTGATCTGTCGAATAACAATCTTTATGGGAAACTCCCTACCTTTGCAGCGAAGAATGTGCTGGTGAAAGCTAATGGCAACCCGAACATTGGCAAGGATGCTCCTGCACCGTCTGGATCAGGTGGTAGTGGCGGCAGCAATGCGCCAGATGGTGGGAATGGTGGTGATGGAAGCAAT GGGAGTCCCTCTCCGTCTTCT GCTGGAATCATTGCT GGCTCAGTGGTTGGTGCTATTGCTGGAGTAGGCCTTCTTGCTGCATTAGGTTTCTATTGCTATAAAAGAAAACAGAAGCCTTTTGGAAGGGTTCAAAGTCCACACGCTATGGTCGTTCATCCTCGGCACTCAGGGTCAGATCCTGATATGGTTAAAATCACAGTTGCTGGTGGCAATGTCAATGGCGGTGCAGCTGCAAGTGAGACATACAGTCAAGCGAGCAGTGGTCCAAGGGATATTCATGTTGTTGAAACTGGAAATATGGTAATTTCAATTCAAGTCCTCCGCAATGTGACCAACAACTTCAGTGATGAGAATGTCCTTGGCCGTGGTGGCTTTGGCACTGTGTACAAGGGTGAGCTTCATGATGGCACAAAAATTGCTGTGAAGCGAATGGAGGCTGGTGTGATGGGTAACAAGGGGCTAAATGAGTTTAAATCAGAGATTGCTGTGCTGACCAAGGTTCGCCATCGGAACCTGGTGTCACTGCTTGGCTACTGTCTCGATGGCAATGAGAGGATTCTAGTGTATGAGTACATGCCACAGGGGACACTGAGTCAACACCTGTTTGAGTGGAAAGAACACAATCTGCGGCCGTTGGAATGGAAGAAGAGACTTAGCATTGCGCTTGATGTTGCAAGGGGTGTTGAGTATCTTCACAGCCTTGCACAGCAGACCTTCATCCACAGAGACTTGAAACCATCAAACATACTCCTCGGTGATGACATGAAGGCAAAGGTGGCAGACTTTGGATTGGTCCGGCTTGCACCGGCTGATGGGAAGTGCGTGTCAGTAGAGACAAGGCTTGCTGGCACTTTTGGATACCTTGCTCCGGAATATGCAGTTACTGGACGAGTAACAACAAAAGCAGATGTCTTCAGCTTTGGTGTCATCTTGATGGAGCTGATCACTGGACGCAAGGCGCTTGATGAGACTCAGCCTGAAGACAGCATGCACCTGGTAACATGGTTCCGAAGAATGCAACTTAGCAAAGACACATTCCAGAAAGCAATTGACCCAACAATTGACCTCACCGAGGAGACACTTGCAAGCGTTAGCACTGTCGCTGAGCTTGCTGGTCACTGCTGTGCTAGGGAACCACACCAGAGGCCCGATATGGGTCATGCTGTCAATGTGCTCTCTACTCTTTCGGATGTTTGGAAACCGTCTGATCCAGATTCAGATGACAGCTATGGTATCGATCTAGACATGACACTGCCGCAAGCATTGAAGAAATGGCAGGCCTTTGAGGATAGCAGCCATTTTGATGGCGCGACGTCTTCATTCCTTGCTAGCTTGGATAATACTCAGACAAGCATACCGACGAGGCCTCCAGGATTTGCAGAATCATTCACCTCTGCTGATGGAAGATAGGGTAG CTTGTGTGAAATCTCAAGCTTGACGGAAGCAGAACATCCAAGTGATCCTTTTTGTTCATTCCTTTAGTCTCCTCACTCCCCTGCTTTTTAATGTTTCTTGGTTTGGCTATGTGCTGCCTTGTAGCTGTCCTTTGATCATGTATCTTGTGATCTTGACTC AAGAATTGCCT ] [+] EMBL C22449 [ ATGGTTACATTGGTGTTGGATGCGATGCAGGGAACATTACAGTGCTGAATTTTGCCAGGATGGGGTTCAGTGGGAGCATCTCCCCAGCTATCGGGAAGATTACAACACTTCAGAAGCTTATTCTTGCAGACAACAATATTACTGGCACGGTGCCGAANGAGGTTGCTGCTTTGCCTGCTCTGACGGAGGTTGATCTGTCGAATAACAATCTTTATGGGAAACTCCCTACCTTTGCAGCGAAGAATGTGCTGGTGAAAGCTAATGGCAACCCGAACATTGGCAAGGATGCTCCTGCACCGTCTGGATCAGGTGGTAGTGGCGGCAGCAATGCGCCAGATGGTGGGAATGGCGGTGATGGAAGCAATGGGGAGTCCCTCTTCGTCTTCTGGCTGGAATCATTGCTGGGCTCAGTGGTTGGTGCTATTGCTGGAGTAGGCCTTCTT ] [+] EMBL AK062249 [ CTTGCAGACAACAATATTACTGGCACGGTGCCGAAGGAGGTTGCTGCTTTGCCTGCTCTGACGGAGGTTGATCTGTCGAATAACAATCTTTATGGGAAACTCCCTACCTTTGCAGCGAAGAATGTGCTGGTGAAAGCTAATGGCAACCCGAACATTGGCAAGGATGCTCCTGCACCGTCTGGATCAGGTGGTAGTGGCGGCAGCAATGCGCCAGATGGTGGGAATGGCGGTGATGGAAGCAAT GGGAGTCCCTCTTCGTCTTCT GCTGGAATCATTGCT GGCTCAGTGGTTGGTGCTATTGCTGGAGTAGGCCTTCTTGCTGCATTAGGTTTCTATTGCTATAAAAGAAAACAGAAGCCTTTTGGAAGGGTTCAAAGTCCACACGCTATGGTTGTTCATCCTCGGCACTCAGGGTCAGATCCTGATATGGTTAAAATCACAGTTGCTGGTGGCAATGTCAATGGCGGTGCAGCTGCAAGTGAGACATACAGTCAAGCGAGCAGTGGTCCAAGGGATATTCATGTTGTTGAAACTGGAAATATGGTAATTTCAATTCAAGTCCTCCGCAATGTGACCAACAACTTCAGTGATGAGAATGTCCTTGGCCGTGGTGGCTTTGGCACTGTGTACAAGGGTGAGCTTCATGATGGCACAAAAATTGCTGTGAAGCGAATGGAGGCTGGTGTGATGGGTAACAAGGGGCTAAATGAGTTTAAATCAGAGATTGCTGTGCTGACCAAGGTTCGCCATCGGAACCTGGTGTCACTGCTTGGCTACTGTCTCGATGGCAATGAGAGGATTCTAGTGTACGAGTACATGCCACAGGGGACACTGAGTCAACACCTGTTTGAGTGGAAAGAACACAATCTGCGGCCGTTGGAATGGAAGAAGAGACTTAGCATTGCGCTTGATGTTGCAAGGGGTGTTGAGTATCTTCACAGCCTTGCACAGCAGACCTTCATCCACAGAGACTTGAAACCATCAAACATACTCCTCGGTGATGACATGAAGGCAAAGGTGGCAGACTTTGGATTGGTCCGGCTTGCACCGGCTGATGGGAAGTGCGTGTCAGTAGAGACAAGGCTTGCTGGCACTTTTGGATACCTTGCTCCGGAATATGCAGTTACTGGACGAGTAACAACAAAAGCAGATGTCTTCAGCTTTGGTGTCATCTTGATGGAGCTGATCACTGGACGCAAGGCGCTTGATGAGACTCAGCCTGAAGACAGCATGCACCTGGTAACATGGTTCCGAAGAATGCAACTTAGCAAAGACACATTCCAGAAAGCAATTGACCCAACAATTGACCTCACCGAGGAGACACTTGCAAGCGTTAGCACTGTCGCTGAGCTTGCTGGTCACTGCTGTGCTAGGGAACCACACCAGAGGCCTGATATGGGTCATGCTGTCAATGTGCTCTCTACTCTTTCGGATGTTTGGAAACCGTCTGATCCAGATTCAGATGACAGCTATGGTATCGATCTAGACATGACACTGCCGCAAGCATTGAAGAAATGGCAGGCCTTTGAGGATAGCAGCCATTTTGATGGCGCGACGTCTTCATTCCTTGCTAGCTTGGATAATACTCAGACAAGCATACCGACGAGGCCTCCAGGATTTGCAGAATCATTCACCTCTGCTGATGGAAGATAGGGTAG CTTGTGTGAAATCTCAAGCTTGACGGAAGCAGAACATCCAAGTGATCCTTTTTGTTCATTCCTTTAGTCTCCTCACTCCCCTGCTTTTTAATGTTTCTTGGTTTGGCTATGTGCTGCCTTGTAGCTGTCCTTTGATCATGTATCTTGTGATCTTGACTCAAAGAATTGCCTGGAAGTTTG ] [+] EMBL OSC102202 [ GCAACCCGAACATTGGCAAGGATGCTCCTGCACCGTCTGGATCAGGTGGTAGTGGCGGCA NAATGCGCCAGATGGTGGGAATGGCGGTGATGGAAGCAAT GGGAGTCCCTCTTCGTCTTCT GCTGGAATCATTGCT GGCTCAGTGGTTGGTGCTATTGCTGGAGTAGGCCTTCTTGCTGCATTAGGTTTCTATTGCTATAAAAGAAAACAGAAGCCTTTTGGAAGGGTTCAAAGTCCACACGCTATGGTTGTTCATCCTCGGCACTCAGGGTCAGATCCTGATATGGTTAAAATCACAGTTGCTGGTGGCAATG ] [+] EMBL OSC107691 [ cncngnCAATGTGACCAACAACTTCAGTGATGAGAATGTCCTTGGCCGTGGTGGCTTTGGCACTGTGTACAAGGGTGAGCTTCATGATGGCACAAAAATTGCTGTGAAGCGAATGGAGGCTGGTGTGATGGGTAACAAGGGGCTAAATGAGTTTAAATCAGAGATTGCTGTNCTGACCAAGGTTCGCCATCGGAACCTGGTGTCACTGCTTGGCTACTGTCTCGATGGCAATGAGAGGATTCTAGTGTATGAGTACATGCCACAGGGGACACTGAGTCAACACCTGTTTGAGTTGNAAGACCACA ] [+] EMBL BE040330 [ GCGTTAGCACTGTCGCTGAGCTTGCTGGTCACTGCTGTGCTAGGGAACCACACCAGAGGCCTGATATGGGTCATGCTGTCAATGTGCTCTCTACTCTTTCGGATGTTTGGAAACCGTCTGATCCAGATTCAGATGACAGCTATGGTATCGATCTAGACATGACACTGCCGCAAGCATTGAAGAAATGGCAGGCCTTTGAGGATAGCAGCCATTTTGATGGCGCGACGTCTTCATTCCTTGCTAGCTTGGATAATACTCAGACAAGCATACCGACGAGGCCTCCAGGATTTGCAGAATCATTCACCTCTGCTGATGGAAGATAGGGTAGAGTTGTGTGAAATCTCAAGCTTGACGGAAGCAGAACATCCAAGTGATCCTTTTTGTTCATTCCTTTAGTCTCCTCACTCCCCTGCTTTTTAATGTTTCTTGGTTTGGCTATGTGCTGCCTTGTAGCTGTCCTTTGATCATGTATCTTGTGATCTTGACTCAAAGAATTGCCTGGAAGTTTGCAAAaaaa ] [+] EMBL C22450 [ TGCTGTCAATGTGCTCTCTACTCTTTCGGATGTTTGGAAACCGTCTGATCCAGATTCAGATGACAGCTATGGTATCGATCTAGACATGACACTGCCGCAAGCATTGAAGAAATGGCAGGCCTTTGAGGATAGCAGCCATTTTGATGGCGCGACGTCTTCATTCCTTGCTAGCTTGGATAATACTCAGACAAGCATACCGACGAGGCCTCCAGGATTTGCAGAATCATTCACCTCTGCTGATGGAAGATAGGGTAG CTTGTGTGAAATCTCAAGCTTGACGGAAGCAGAACATCCAAGTGATCCTTTTTGTTCATTCCTTTAGTCTCCTCACTCCCCTGCTTTTTAATGTTTCTTGGTTTGGCTATGTGCTGCCTTGTAGCTGTCCTTTGATCATGTATCTTGTGATCTTGACTCAAAGAATTGCCTGGAAGTTTGCAAAaa ] [-] EMBL CB966792 [ tcgaacgagGCTCTCTACTC TTCGGATGTTTGG AACCTTC GATCCAGATTCAGA GACAGCTAT GTATCGATCTAGACA GACACTGCCGCAAGCATTGAAGAAATGGCAGGCCCTTGAGGATACCCACCATTTTGATGGCGCGACGTCTTCATTCCCTGCTAGCTTGGATAATACTCAGACAAGCATACCGACGAGGCCTCCAGGATTTGCAGAATCATTCACCTCTGCTGATGGAAGATAGGGTAG CTTGTGTGAAATCTCAAGCTTGACGGAAGCAGAACATCCAAGTGATCCTTTTTGTTCATTCCTTTAGTCTCCTCACTCCCCTGCTTTTTAATGTTTCTTGGTTTGGCTATGTGCTGCCTTGTAGCTGTCCTTTGATCATGTATCTTGTGATCTTGACTC AAGAATTGCCTGGAAGTTTGCCAATTTGCTAAC GTTCTGTTCTGCCATATTTCTGAGCTTAAAACCGGAGCGGTGAAGGGCTGCTGGGCTGTATCAACACTACTCCCTGCTCCTTAACATCATCTCAGTTGTAGTCATTGTTGCTACTGTATTCTTTTAGTTCTATGATGAT ] [-] EMBL CB965769 [ ATCTAGACATGACACTTCCGCAATCATTGAAGAAATGTCAGCCCTTTGAGGATACCAGCCATTTTGATGGCGCGACGTCTTCATTCCTTGCTAGCTTGGATAATACTCAGACAAGCATACCGACGAGGCCTCCAGGATTTGCAGAATCATTCACCTCTGCTGATGGAAGATAGGGTAG CTTGTGTGAAATCTCAAGCTTGACGGAAGCAGAACATCCAAGTGATCCTTTTTGTTCATTCCTTTAGTCTCCTCACTCCCCTGCTTTTTAATGTTTCTTGGTTTGGCTATGTGCTGCCTTGTAGCTGTCCTTTGATCATGTATCTTGTGATCTTGACTC AAGAATTGCCTGGAAGTTTGCAAATTTGCTAAC GTTCTGTTCTGCCATATTTCTGAGCTTAAAACAGGAGCGGTGAAGGGCTGCTGGGCTGTATCAACACTACTCCCTGCTCCTTAACATCATCTCAGTTGTAGTCATTGTTGCTACTGTATTCTTTTAGTTCTATGATGAT ] consensusID : consensus_13564#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 452 fasta sequence [GCTCTCTACTCTTTCGGATGTTTGGAAACCGTCTGATCCAGATTCAGATGACAGCTATGGTATCGATCTAGACATGACACTGCCGCAAGCATTGAAGAAATGGCAGGCCTTTGAGGATAGCAGCCATTTTGATGGCGCGACGTCTTCATTCCTTGCTAGCTTGGATAATACTCAGACAAGCATACCGACGAGGCCTCCAGGATTTGCAGAATCATTCACCTCTGCTGATGGAAGATAGGGTAGCTTGTGTGAAATCTCAAGCTTGACGGAAGCAGAACATCCAAGTGATCCTTTTTGTTCATTCCTTTAGTCTCCTCACTCCCCTGCTTTTTAATGTTTCTTGGTTTGGCTATGTGCTGCCTTGTAGCTGTCCTTTGATCATGTATCTTGTGATCTTGACTCAAAGAATTGCCTGGANGTTTGCAAA------AAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL C22343 [GCTCTCTACTCTTTCGGATGTTTGGAAACCGTCTGATCCAGATTCAGATGACAGCTATGGTATCGATCTAGACATGACACTGCCGCAAGCATTGAAGAAATGGCAGGCCTTTGAGGATAGCAGCCATTTTGATGGCGCGACGTCTTCATTCCTTGCTAGCTTGGATAATACTCAGACAAGCATACCGACGAGGCCTCCAGGATTTGCAGAATCATTCACCTCTGCTGATGGAAGATAGGGTAGCTTGTGTGAAATCTCAAGCTTGACGGAAGCAGAACATCCAAGTGATCCTTTTTGTTCATTCCTTTAGTCTCCTCACTCCCCTGCTTTTTAATGTTTCTTGGTTTGGCTATGTGCTGCCTTGTAGCTGTCCTTTGATCATGTATCTTGTGATCTTGACTCAAAGAATTGCCTGGANGTTTGCAAA AAAAAAAAAAAAAAAAA ] [+] EMBL CF315041 [ CGGATGTTTGGAAACCGTCTGATCCAGATTCAGATGACAGCTATGGTATCGATCTAGACATGACACTGCCGCAAGCATTGAAGAAATGGCAGGCCTTTGAGGATAGCAGCCATTTTGATGGCGCGACGTCTTCATTCCTTGCTAGCTTGGATAATACTCAGACAAGCATACCGACGAGGCCTCCAGGATTTGCAGAATCATTCACCTCTGCTGATGGAAGATAGGGTAGCTTGTGTGAAATCTCAAGCTTGACGGAAGCAGAACATCCAAGTGATCCTTTTTGTTCATTCCTTTAGTCTCCTCACTCCCCTGCTTTTTAATGTTTCTTGGTTTGGCTATGTGCTGCCTTGTAGCTGTCCTTTGATCATGTATCTTGTGATCTTGACTCAAAGAATTGCCT ] [+] EMBL C22346 [ GGATGTTTGGAAACCGTCTGATCCAGATTCAGATGACAGCTATGGTATCGATCTAGACATGACACTGCCGCAAGCATTGAAGAAATGGCAGGCCTTTGAGGATAGCAGCCATTTTGATGGCGCGACGTCTTCATTCCTTGCTAGCTTGGATAATACTCAGACAAGCATACCGACGAGGCCTCCAGGATTTGCAGAATCATTCACCTCTGCTGATGGAAGATAGGGTAGCTTGTGTGAAATCTCAAGCTTGACGGAAGCAGAACATCCAAGTGATCCTTTTTGTTCATTCCTTTAGTCTCCTCACTCCCCTGCTTTTTAATGTTTCTTGGTTTGGCTATGTGCTGCCTTGTAGCTGTCCTTTGATCATGTATCTTGTGATCTTGACTCAAAGAATTGCCTGGATGTTTGCAAATTTGCTAAAAAAAAAAAAAAAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13564#0 GTGACCCTGACGAACAATTTGCTGCAGGGGCCGACGCCCAAATTTGCCGATAAGGTGAAA 60 consensus_13564#1 ------------------------------------------------------------ consensus_13564#0 GCAGATGTGGTGCCGACTACGGAGCGGTTCTGCTTGAGCACCCCTGGACAACCTTGTGAT 120 consensus_13564#1 ------------------------------------------------------------ consensus_13564#0 CCCCGTGTAAACCTGCTGCTGGAGGTGGCGGCTGAGTTCCAGTACCCGGCGAAGCTCGCA 180 consensus_13564#1 ------------------------------------------------------------ consensus_13564#0 GATAATTGGAAAGGGAATGATCCGTGTGATGGTTACATTGGTGTTGGATGCGATGCAGGG 240 consensus_13564#1 ------------------------------------------------------------ consensus_13564#0 AACATTACAGTGCTGAATTTTGCCAGGATGGGGTTCAGTGGGAGCATCTCCCCAGCTATC 300 consensus_13564#1 ------------------------------------------------------------ consensus_13564#0 GGGAAGATTACAACACTTCAGAAGCTTATTCTTGCAGACAACAATATTACTGGCACGGTG 360 consensus_13564#1 ------------------------------------------------------------ consensus_13564#0 CCGAAGGAGGTTGCTGCTTTGCCTGCTCTGACGGAGGTTGATCTGTCGAATAACAATCTT 420 consensus_13564#1 ------------------------------------------------------------ consensus_13564#0 TATGGGAAACTCCCTACCTTTGCAGCGAAGAATGTGCTGGTGAAAGCTAATGGCAACCCG 480 consensus_13564#1 ------------------------------------------------------------ consensus_13564#0 AACATTGGCAAGGATGCTCCTGCACCGTCTGGATCAGGTGGTAGTGGCGGCAGCAATGCG 540 consensus_13564#1 ------------------------------------------------------------ consensus_13564#0 CCAGATGGTGGGAATGGCGGTGATGGAAGCAATGGGAGTCCCTCTTCGTCTTCTGCTGGA 600 consensus_13564#1 ------------------------------------------------------------ consensus_13564#0 ATCATTGCTGGCTCAGTGGTTGGTGCTATTGCTGGAGTAGGCCTTCTTGCTGCATTAGGT 660 consensus_13564#1 ------------------------------------------------------------ consensus_13564#0 TTCTATTGCTATAAAAGAAAACAGAAGCCTTTTGGAAGGGTTCAAAGTCCACACGCTATG 720 consensus_13564#1 ------------------------------------------------------------ consensus_13564#0 GTTGTTCATCCTCGGCACTCAGGGTCAGATCCTGATATGGTTAAAATCACAGTTGCTGGT 780 consensus_13564#1 ------------------------------------------------------------ consensus_13564#0 GGCAATGTCAATGGCGGTGCAGCTGCAAGTGAGACATACAGTCAAGCGAGCAGTGGTCCA 840 consensus_13564#1 ------------------------------------------------------------ consensus_13564#0 AGGGATATTCATGTTGTTGAAACTGGAAATATGGTAATTTCAATTCAAGTCCTCCGCAAT 900 consensus_13564#1 ------------------------------------------------------------ consensus_13564#0 GTGACCAACAACTTCAGTGATGAGAATGTCCTTGGCCGTGGTGGCTTTGGCACTGTGTAC 960 consensus_13564#1 ------------------------------------------------------------ consensus_13564#0 AAGGGTGAGCTTCATGATGGCACAAAAATTGCTGTGAAGCGAATGGAGGCTGGTGTGATG 1020 consensus_13564#1 ------------------------------------------------------------ consensus_13564#0 GGTAACAAGGGGCTAAATGAGTTTAAATCAGAGATTGCTGTGCTGACCAAGGTTCGCCAT 1080 consensus_13564#1 ------------------------------------------------------------ consensus_13564#0 CGGAACCTGGTGTCACTGCTTGGCTACTGTCTCGATGGCAATGAGAGGATTCTAGTGTAT 1140 consensus_13564#1 ------------------------------------------------------------ consensus_13564#0 GAGTACATGCCACAGGGGACACTGAGTCAACACCTGTTTGAGTGGAAAGAACACAATCTG 1200 consensus_13564#1 ------------------------------------------------------------ consensus_13564#0 CGGCCGTTGGAATGGAAGAAGAGACTTAGCATTGCGCTTGATGTTGCAAGGGGTGTTGAG 1260 consensus_13564#1 ------------------------------------------------------------ consensus_13564#0 TATCTTCACAGCCTTGCACAGCAGACCTTCATCCACAGAGACTTGAAACCATCAAACATA 1320 consensus_13564#1 ------------------------------------------------------------ consensus_13564#0 CTCCTCGGTGATGACATGAAGGCAAAGGTGGCAGACTTTGGATTGGTCCGGCTTGCACCG 1380 consensus_13564#1 ------------------------------------------------------------ consensus_13564#0 GCTGATGGGAAGTGCGTGTCAGTAGAGACAAGGCTTGCTGGCACTTTTGGATACCTTGCT 1440 consensus_13564#1 ------------------------------------------------------------ consensus_13564#0 CCGGAATATGCAGTTACTGGACGAGTAACAACAAAAGCAGATGTCTTCAGCTTTGGTGTC 1500 consensus_13564#1 ------------------------------------------------------------ consensus_13564#0 ATCTTGATGGAGCTGATCACTGGACGCAAGGCGCTTGATGAGACTCAGCCTGAAGACAGC 1560 consensus_13564#1 ------------------------------------------------------------ consensus_13564#0 ATGCACCTGGTAACATGGTTCCGAAGAATGCAACTTAGCAAAGACACATTCCAGAAAGCA 1620 consensus_13564#1 ------------------------------------------------------------ consensus_13564#0 ATTGACCCAACAATTGACCTCACCGAGGAGACACTTGCAAGCGTTAGCACTGTCGCTGAG 1680 consensus_13564#1 ------------------------------------------------------------ consensus_13564#0 CTTGCTGGTCACTGCTGTGCTAGGGAACCACACCAGAGGCCTGATATGGGTCATGCTGTC 1740 consensus_13564#1 ------------------------------------------------------------ consensus_13564#0 AATGTGCTCTCTACTCTTTCGGATGTTTGGAAACCGTCTGATCCAGATTCAGATGACAGC 1800 consensus_13564#1 -----GCTCTCTACTCTTTCGGATGTTTGGAAACCGTCTGATCCAGATTCAGATGACAGC 55 ******************************************************* consensus_13564#0 TATGGTATCGATCTAGACATGACACTGCCGCAAGCATTGAAGAAATGGCAGGCCTTTGAG 1860 consensus_13564#1 TATGGTATCGATCTAGACATGACACTGCCGCAAGCATTGAAGAAATGGCAGGCCTTTGAG 115 ************************************************************ consensus_13564#0 GATAGCAGCCATTTTGATGGCGCGACGTCTTCATTCCTTGCTAGCTTGGATAATACTCAG 1920 consensus_13564#1 GATAGCAGCCATTTTGATGGCGCGACGTCTTCATTCCTTGCTAGCTTGGATAATACTCAG 175 ************************************************************ consensus_13564#0 ACAAGCATACCGACGAGGCCTCCAGGATTTGCAGAATCATTCACCTCTGCTGATGGAAGA 1980 consensus_13564#1 ACAAGCATACCGACGAGGCCTCCAGGATTTGCAGAATCATTCACCTCTGCTGATGGAAGA 235 ************************************************************ consensus_13564#0 TAGGGTAGCTTGTGTGAAATCTCAAGCTTGACGGAAGCAGAACATCCAAGTGATCCTTTT 2040 consensus_13564#1 TAGGGTAGCTTGTGTGAAATCTCAAGCTTGACGGAAGCAGAACATCCAAGTGATCCTTTT 295 ************************************************************ consensus_13564#0 TGTTCATTCCTTTAGTCTCCTCACTCCCCTGCTTTTTAATGTTTCTTGGTTTGGCTATGT 2100 consensus_13564#1 TGTTCATTCCTTTAGTCTCCTCACTCCCCTGCTTTTTAATGTTTCTTGGTTTGGCTATGT 355 ************************************************************ consensus_13564#0 GCTGCCTTGTAGCTGTCCTTTGATCATGTATCTTGTGATCTTGACTCAAAGAATTGCCTG 2160 consensus_13564#1 GCTGCCTTGTAGCTGTCCTTTGATCATGTATCTTGTGATCTTGACTCAAAGAATTGCCTG 415 ************************************************************ consensus_13564#0 GAAGTTTGCAAATTTGCTAACGTTCTGTTCTGCCATATTTCTGAGCTTAAAACAGGAGCG 2220 consensus_13564#1 GANGTTTGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA----------------------- 452 ** ********* ** * * consensus_13564#0 GTGAAGGGCTGCTGGGCTGTATCAACACTACTCCCTGCTCCTTAACATCATCTCAGTTGT 2280 consensus_13564#1 ------------------------------------------------------------ consensus_13564#0 AGTCATTGTTGCTACTGTATTCTTTTAGTTCTATGATGATCATGATTGTACCAGAACCAT 2340 consensus_13564#1 ------------------------------------------------------------ consensus_13564#0 CTCAATTATTGGAGACCGTGGTCAGGGCGTCAGGCCGTCTCCTAACTGTCAAAAT 2395 consensus_13564#1 ------------------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||