cluster # 13599

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Oryza sativa
cluster # 13599 cluster # 13599 Sequences # 13 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_13599#0 length = 1950 sequences # 9
consensus_13599#1 length = 381 sequences # 1

consensus_13599#2 length = 378 sequences # 1
consensus_13599#3 length = 134 sequences # 2

consensusID : consensus_13599#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1950
fasta sequence

                              [GAAAAAAAAACCAGCATAGCAAAGCAAGGGTTTAGGGCGGCGGCGGCGGATTCCGCGGCGGCCATGGCGACGGCGGTGCGGCTCCTGCGAAGGAGCCTGCGAGGGGGCGAGGCAGCACCTCGGTTCTTATCCGCTTCTCAAAATTTGGTACGACTAGTTGCAAACAACACCAGATCAGTTGATGTTGGCCAACCAACACCCCGATCTCATCCTGAGTTATTAGCTGAAGGAGAGATTACACCAGGTATCACTAGCGATGAGTACATCTTCAGAAGAAAAAAGCTTTTGGAGGTTCT-GCCAGAGAAGAGCTT-GGCCATTATTGCGTCCGCAGAGCAGCAGATGATGACTGATGTAGTGCCATACTCATTCAGACAGAATGGTGATTACCTGTATATTACAGGTTGTGCACAACCTGGTGGTGTGGCAGTTTTAAGTGAGGAAACTGGTCTGTGTATGTTCATGCCAGATACAAGTAAGGAGGATGTGGTCTGGCAAGGTCAGACAGCTGGAGTTGAGGCAGCTGAGAATTTCTTCAAAGCGGACAAAGCATTTCCACTTAGTGAGATGCAAAAGATCCTTCCTGAAATGATTGAGCGGTCAAAAGTGGTATATCACAATGTAAAGACACTTTCGCCATCTTATAAGAACTTGGATTCCTTTCGTAGGGCATCACTCAATAATAAAGTAAAAGATATTGCATACTACACTGATGAACTGCGGTGGATCAAGTCAAAATCAGAAATTGGGTTGATGCGAGAATCAGCATCTATTGTTTCTCAGTCTCTTTTACAAACGATGTTGCTATCTAGGACCCATAGGGAGG-AAAGCCAACTGGCAGCTAAGATCGAGTATGAGTGCAAAATGAGGGGTGCCCAAAGAATGGCGTTCCATCCTGTAGTTGGTGGTGGAGCAAATGGCAGTGTAATACACTACTCAAGAAATGACGGAAGGGTCAAAGCAGGTGAACTACTGCTCATGGATGTTGGCTGTGAGTATCATGGCTACCTTAGCGACCTGACTCGAACATGGCCACCCTGTGGCAGGTTTTCACCTGCTCAGGAAGAACTATACAGCCTGATACTGGAGACAAATAAGGAATGCATAAAGCTTTGTAAACCAGGCGCAAGCATTAACGAGATACATAATCATTCGGTCAAGATGTTGATAAAGGGTTTCCAAGAACTTGGAATTTTAGAGAAGGGGAAATCCATCCAATACAATTATTTGAAT-CCAACAGCAATAGGTCACTCGTTAGGAATGGATATTCATGATTCCGTCAAGCTTAGCAAGGACAAACCCTTGGAGCCAGGAGTTATAATAACGAT-CGAGCCC-GGGGTTTACATCCCACCGGTGCCAATACTGAAAGAGAACGCCCCAGATAGGTACCGGGGCATCGGAATTAGGATCGAGGACGAGGTCCTCATCACCGAGTCTGGT-CACGAGGTCCTG-ACGGCGTCGGTGCCGAAGGAGATCTCTCACATAACCACCCTTATGAACATGGGTAGTAACTCCATGATGGATGCCCATGAGCTGAGGGCTGCCTGCAGTTGAGAAGTTCAGACAATGCTGTCCTGATGCATCATCCCTCTTCCCTCCAGCGATCTTCGCATCCAAATTCCAATTGACATTCATTCTTCGTTAAAGCTGAGAGATGAATCGGGATTATGAAGGCTCAAGTGGGGTTATGGTTTTTGAGAAACCCGAACCACCCTGATCGTCTCAGGGCTGTACGGGTTTTTCGCTGGTTTTCACGAGAAAAACCAGCTGTTTTCAGTGTTTGCAATTTTTTTT-AGCTTTGTTAAGGACTGAAATTTGTAACATACTACCTCAGATTATGTACAAATTCAGATGGTGACAGAAACAAAAGCACGAAATTAGGGTCACAAGAAGCCCCTGAAAGAACATGTGAAAATTCAGACGACAGTAATCAAAGTTTCTGAAAAAAAAAGA]

[+] EMBL AK102247             [GAAAAAAAAACCAGCATAGCAAAGCAAGGGTTTAGGGCGGCGGCGGCGGATTCCGCGGCGGCCATGGCGACGGCGGTGCGGCTCCTGCGAAGGAGCCTGCGAGGGGGCGAGGCAGCACCTCGGTTCTTATCCGCTTCTCAAAATTTGGTACGACTAGTTGCAAACAACACCAGATCAGTTGATGTTGGCCAACCAACACCCCGATCTCATCCTGAGTTATTAGCTGAAGGAGAGATTACACCAGGTATCACTAGCGATGAGTACATCTTCAGAAGAAAAAAGCTTTTGGAGGTTCT GCCAGAGAAGAGCTT GGCCATTATTGCGTCCGCAGAGCAGCAGATGATGACTGATGTAGTGCCATACTCATTCAGACAGAATGGTGATTACCTGTATATTACAGGTTGTGCACAACCTGGTGGTGTGGCAGTTTTAAGTGAGGAAACTGGTCTGTGTATGTTCATGCCAGATACAAGTAAGGAGGATGTGGTCTGGCAAGGTCAGACAGCTGGAGTTGAGGCAGCTGAGAATTTCTTCAAAGCGGACAAAGCATTTCCACTTAGTGAGATGCAAAAGATCCTTCCTGAAATGATTGAGCGGTCAAAAGTGGTATATCACAATGTAAAGACACTTTCGCCATCTTATAAGAACTTGGATTCCTTTCGTAGGGCATCACTCAATAATAAAGTAAAAGATATTGCATACTACACTGATGAACTGCGGTGGATCAAGTCAAAATCAGAAATTGGGTTGATGCGAGAATCAGCATCTATTGTTTCTCAGTCTCTTTTACAAACGATGTTGCTATCTAGGACCCATAGGGAGG AAAGCCAACTGGCAGCTAAGATCGAGTATGAGTGCAAAATGAGGGGTGCCCAAAGAATGGCGTTCCATCCTGTAGTTGGTGGTGGAGCAAATGGCAGTGTAATACACTACTCAAGAAATGACGGAAGGGTCAAAGCAGGTGAACTACTGCTCATGGATGTTGGCTGTGAGTATCATGGCTACCTTAGCGACCTGACTCGAACATGGCCACCCTGTGGCAGGTTTTCACCTGCTCAGGAAGAACTATACAGCCTGATACTGGAGACAAATAAGGAATGCATAAAGCTTTGTAAACCAGGCGCAAGCATTAACGAGATACATAATCATTCGGTCAAGATGTTGATAAAGGGTTTCCAAGAACTTGGAATTTTAGAGAAGGGGAAATCCATCCAATACAATTATTTGAAT CCAACAGCAATAGGTCACTCGTTAGGAATGGATATTCATGATTCCGTCAAGCTTAGCAAGGACAAACCCTTGGAGCCAGGAGTTATAATAACGAT CGAGCCC GGGGTTTACATCCCACCGGTGCCAATACTGAAAGAGAACGCCCCAGATAGGTACCGGGGCATCGGAATTAGGATCGAGGACGAGGTCCTCATCACCGAGTCTGGT CACGAGGTCCTG ACGGCGTCGGTGCCGAAGGAGATCTCTCACATAACCACCCTTATGAACATGGGTAGTAACTCCATGATGGATGCCCATGAGCTGAGGGCTGCCTGCAGTTGAGAAGTTCAGACAATGCTGTCCTGATGCATCATCCCTCTTCCCTCCAGCGATCTTCGCATCCAAATTCCAATTGACATTCATTCTTCGTTAAAGCTGAGAGATGAATCGGGATTATGAAGGCTCAAGTGGGGTTATGGTTTTTGAGAAACCCGAACCACCCTGATCGTCTCAGGGCTGTACGGGTTTTTCGCTGGTTTTCACGAGAAAAACCAGCTGTTTTCAGTGTTTGCAATTTTTTTT AGCTTTGTTAAGGACTGAAATTTGTAACATACTACCTCAGATTATGTACAAATTCAGATGGTGACAGAAACAAAAGCACGAAATTAGGGTCACAAGAAGC                                                           ]
[+] EMBL CB667152             [            AGCATAGCAAAGCAAGGGTTTAGGGCGGCGGCGGCGGATTCCGCGGCGGCCATGGCGACGGCGGTGCGGCTCCTGCGAAGGAGCCTGCGAGGGGGCGAGGCAGCACCTCGGTTCTTATCCGCTTCTCAAAATTTGGTACGACTAGTTGCAAACAACACCAGATCAGTTGATGTTGGCCAACCAACACCCCGATCTCATCCTGAGTTATTAGCTGAAGGAGAGATTACACCAGGTATCACTAGCGATGAGTACATCTTCAGAAGAAAAAAGCTTTTGGAGGTTCT GCCAGAGAAGAGCTT GGCCATTATTGCGTCCGCAGAGCAGCAGATGATGACTGATGTAGTGCCATACTCATTCAGACAGAATGGTGATTACCTGTATATTACAGGTTGTGCACAACCTGGTGGTGTGGCAGTTTTAAGTGAGGAAACTGGTCTGTGTATGTTCATGCCAGATACAAGTAAGGAGGATGTGGTCTGGCAAGGTCAGACAGCTGGAGTTGAGGCAGCTGAGAATTTCTTCAAAGCGGACAAAGCATTTCCACTTAGTGAGATGCAAAAGATCCTTCCTGAAATGATTGAGCGGTCAAAAGTGGTATATCACAATGTAAAGACACTTTCGCCATCTTATAAGAACTTGGATTCCTTTCGTAGGGCATCACTCAATAATAAAGTAAAAGATATTGCATACTACACTGATGAACTGCGGTGGATCAAGTCAAAATCAGAAATTGGGTTGATGCGAGAATCAGCATCTATTGTTTCTCAGTCTCTTTTACAAACGATGTTGCTATCTAGGACCCATAGGGAGGAAAAGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AU068181             [              CATAGCAAAGCAAGGGTTTAGGGCGGCGGCGGCGGATTCCGCGGCGGCCATGGCGACGGCGGTGCGGCTCCTGCGAAGGAGCCTGCGAGGGGGCGAGGCAGCACCTCGGTTCTTATCCGCTTCTCAAAATTTGGTACGACTAGTTGCAAACAACACCAGATCAGTTGATGTTGGCCAACCAACACCCCGATCTCATCCTGAGTTATTAGCTGAAGGAGAGATTACACCAGGTATCACTAGCGATGAGTACATCTTCAGAAGAAAAAAGCTTTTGGAGGTTCT GCCAGAGAAGAGCTT GGCCATTATTGCGTCCGCAGAGCAGCAGATGATGACTGATGTAGTGCCATACTCATTCAGACAGAATGGTGATTACCTGTATATTACAGGTTGTGCACAACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL OSC318               [                     AAGCAAGGGTTTAGGGCGGCGGCGGCGGNTTNCGCGGCGGCCATGGCGACGGCGGTGCGGCTCCTNCGAAGGAG CTGCNTGGGGGCGNNGCAGCACCTNGGTTCTNATCCGCTTCTCAAAATTTGGTACGACTAGTTGCAAACAACACCAGATCAGTTNATGTTGGCCAACCAACACCCCGATCTCATCCTGAGTTATTAGCTGAAGGAGAGTTTACACCAGGTATCACTAGCGATGAGTACATCTTCAGAAGAAAAAAGCTNTTGGAGGTTCTNCCCAGAGAAGANCTTGGGCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CB667153             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CATAAAGCTTT TAAACCAGGCGCAAGCATTAACGAGATACATAATCATTCGGTCAAGATGTTGATAAAGGGTTTCCAAGAACTTGGAATTTTAGAGAAGGGGAAATCCATCCAATACAATTATTTGAAT CCAACAGCAATAGGTCACTCGTTAGGAATGGATATTCATGATTCCGTCAAGCTTAGCAAGGACAAACCCTTGGAGCCAGGAGTTATAATAACGAT CGAGCCC GGGGTTTACATCCCACCGGTGCCAATACTGAAAGAGAACGCCCCAGATAGGTACCGGGGCATCGGAATTAGGATCGAGGACGAGGTCCTCATCACCGAGTCTGGT CACGAGGTCCTG ACGGCGTCGGTGCCGAAGGAGATCTCTCACATAACCACCCTTATGAACATGGGTAGTAACTCCATGATGGATGCCCATGAGCTGAGGGCTGCCTGCAGTTGAGAAGTTCAGACAATGCTGTCCTGATGCATCATCCCTCTTCCCTCCAGCGATTTTCGCATCCAAATTCCAATTGACATTCATTTTTCGTTAAAGCTGAGAGATGAATCGGGATTATGAAGGCTCAAGTGGGGTTATGGTTTTTGAGAAACCCGAACCACCCTGATCGTCTCAGGGCTGTACGGGTTTTTCGCTGGTTTTCACGAGAAAAACCAGCTGTTTTCAGTGTTTGCAATTTTTTTT AGCTTTGTTAAGGACTGAAATTTGTAACATACTACCTCAGATTATGTACAAATTCAGATGGTGACAGAAACAAAAGCACGAAATTAGGGTCACAAGAAGCCCCTGAAAGAACATGTGAAAATTCAGACGACAGTAATCAAAGTTTCTGAAAAAAAAAGA]
[+] EMBL AU068182             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TCCATCCAATACAATTATTTGAATCCCAACAGCAATAGGTCACTCGTTAGG ATGGATATTCATGATTCCGTCAAGCTTAGCAAGGACAAACCCTTGGAGCCAGGAGTTATAATAACGAT CGAGCCC GGGGTTTACATCCCACCGGTGCCAATACTGAAAGAGAACGCCCCAGATAGGTACCGGGGCATCGGAATTAGGATCGAGGACGAGGTCCTCATCACCGAGTCTGGT CACGAGGTCCTG ACGGCGTCGGTGCCGAAGGAGATCTCTCACATAACCACCCTTATGAACATGGGTAGTAACTCCATGATGGATGCCCATGAGCTGAGGGCTGCCTGCAGTTGAGAAGTTCAGACAATGCTGTCCTGATGCATCATCCCTCTTCCCTCCAGCGATCTTCGCATCCAAATTCCAATTGACATTCATTCTTCGTTAAAGCTGAGAGATGAATCGGGATTATGAAGGCTCAAGTGGGGTTATGGTTTTTGAGAAACCCGAACCACCCTGATCGTCTCAGGGCTGTACGGGTTTTTCGCTGGTTTTCACGAGAAAAACCAGCTGTTTTCAGTGTTTGCAATTTTTTTT AGCTTTGTTAAGGACTGAAATTTGTAACATACTACCTCAGATTATGTACAAATTCAGATGGTGACAGAAACAAAAGCACGAAATTAGGGTCACAAGAAGCCCCTGAAAaa                                                 ]
[+] EMBL BE607395             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TAATAACGAT CGAGCCT GGGGTTTACATCCCACCGGTGCCAATACTGAAAGAGAACGCCCCAGATAGGTACCGAGGCATCGGAATTAGGATCGAGGACGAGGTCCTCATCACTGAGTCCGGT CACGAGGTCCTG ACGGCGTCGGTGCCGAAGGAGATCTCTCACATAACCACCCTTATGAACATGGGTAGTAACTCCATGATGGATGCCCATGAGCTGAGGGCTGCCTGCAGTTGAGAAGTTCAGACAATGCTGTCCTGATGCATCATCCCTCTTCCCTCCAGCGATCGTCGCATCCAAATTCCAATTCACATTCATTCTTCGTTAAAGCTGAGAGATGAATCGGGATTATGAAGGCTCAAATGGGGTTATGATTTTTGAGAAACCCGAACCACCCTGATCGTGTCAGGGCGGTGCGGGTTTTTCACTGGTTTTCACGAGAAAAACCAGCTGTTTTCAGTGTTTGCAATTTTTTTTGAGCTTTGTTAAGGACTGAAATTTGTAACATACTACCCCAGATTA                                                                                                                   ]
[+] EMBL BE607443             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TAATAACGAT CGAGCCT GGGGTTTACATCCCACCGGTGCCAATACTGAAAGAGAACGCCCCAGATAGGTACCGAGGCATCGGAATTAGGATCGAGGACGAGGTCCTCATCACTGAGTCCGGT CACGAGGTCCTG ACGGCGTCGGTGCCGAAGGAGATCTCTCACATAACCACCCTTATGAACATGGGTAGTAACTCCATGATGGATGCCCATGAGCTGAGGGCTGCCTGCAGTTGAGAAGTTCAGACAATGCTGTCCTGATGCATCATCCCTCTTCCCTCCAGCGATCGTCGCATCCAAATTCCAATTCACATTCATTCTTCGTTAAAGCTGAGAGATGAATCGGGATTATGAAGGCTCAAATGGGGTTATGATTTTTGAGAAACCCGAACCACCCTGATCGTGTCAGGGCGGTGCGGGTTTTTCACTGGTTTTCACGAGAAAAACCAGCTGTTTTCAGTGTTTGCAATTTTTTTTGAGCTTTGTTAAGGACTGAAATTTGTAACATACTACCCCAGATTA                                                                                                                   ]
[+] EMBL AU094401             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AATNACGATCCGAGCCCNGGGGTTTACATCCCACCGTTGCCAATACTNAAAGAGAACGCCCCAGATAGGTACCGGGNCNTCGGAATTAGGATCGAGGACGAGGTCCTCATCACCGAGTCTGGTCCACGAGGTCCTGAACGGCGTCGGTGCCGAAGGAGATCTCTCACATAACCACCCTTATGAACATGGGTAGTAACTCCATGATGGATGCCCATGAGCTGAGGGCTGCCTGCAGTTGAGAAGTTCAGACAATGCTGTCCTGATGCATCATCCCTCTTCCCTCCAGCGATCTTCGCATCCAAATTCCAATTGACATTCATTCTTCGTTAAAGCTGAGAGATGAATCGGGATTATGAAGGCTCAAGTGGGGTTATGGTTTTTGAGAAACCCGAACCACCCTGATCGTCTCAGGGCTGTACGGGTTTTTCGCTGGTTTTCACGAGAAAAACCAGCTGTTTTCAGTGTTTGCAATTTTTTTT AGCTTTGTTAAGGACTGAAATTTGTAACATACTACCTCAGATTATGTACAAATTCAGATGGTGACAGAAACAAAAGCACGAAATTAGGGTCACAAGAAGCCCCTGAAAGAACATGTGAAAATTCAGACGACAGTAATCAAAGTTTCTGAAATCAAAA  ]




>consensus_13599#0
GAAAAAAAAACCAGCATAGCAAAGCAAGGGTTTAGGGCGGCGGCGGCGGATTCCGCGGCG
GCCATGGCGACGGCGGTGCGGCTCCTGCGAAGGAGCCTGCGAGGGGGCGAGGCAGCACCT
CGGTTCTTATCCGCTTCTCAAAATTTGGTACGACTAGTTGCAAACAACACCAGATCAGTT
GATGTTGGCCAACCAACACCCCGATCTCATCCTGAGTTATTAGCTGAAGGAGAGATTACA
CCAGGTATCACTAGCGATGAGTACATCTTCAGAAGAAAAAAGCTTTTGGAGGTTCTGCCA
GAGAAGAGCTTGGCCATTATTGCGTCCGCAGAGCAGCAGATGATGACTGATGTAGTGCCA
TACTCATTCAGACAGAATGGTGATTACCTGTATATTACAGGTTGTGCACAACCTGGTGGT
GTGGCAGTTTTAAGTGAGGAAACTGGTCTGTGTATGTTCATGCCAGATACAAGTAAGGAG
GATGTGGTCTGGCAAGGTCAGACAGCTGGAGTTGAGGCAGCTGAGAATTTCTTCAAAGCG
GACAAAGCATTTCCACTTAGTGAGATGCAAAAGATCCTTCCTGAAATGATTGAGCGGTCA
AAAGTGGTATATCACAATGTAAAGACACTTTCGCCATCTTATAAGAACTTGGATTCCTTT
CGTAGGGCATCACTCAATAATAAAGTAAAAGATATTGCATACTACACTGATGAACTGCGG
TGGATCAAGTCAAAATCAGAAATTGGGTTGATGCGAGAATCAGCATCTATTGTTTCTCAG
TCTCTTTTACAAACGATGTTGCTATCTAGGACCCATAGGGAGGAAAGCCAACTGGCAGCT
AAGATCGAGTATGAGTGCAAAATGAGGGGTGCCCAAAGAATGGCGTTCCATCCTGTAGTT
GGTGGTGGAGCAAATGGCAGTGTAATACACTACTCAAGAAATGACGGAAGGGTCAAAGCA
GGTGAACTACTGCTCATGGATGTTGGCTGTGAGTATCATGGCTACCTTAGCGACCTGACT
CGAACATGGCCACCCTGTGGCAGGTTTTCACCTGCTCAGGAAGAACTATACAGCCTGATA
CTGGAGACAAATAAGGAATGCATAAAGCTTTGTAAACCAGGCGCAAGCATTAACGAGATA
CATAATCATTCGGTCAAGATGTTGATAAAGGGTTTCCAAGAACTTGGAATTTTAGAGAAG
GGGAAATCCATCCAATACAATTATTTGAATCCAACAGCAATAGGTCACTCGTTAGGAATG
GATATTCATGATTCCGTCAAGCTTAGCAAGGACAAACCCTTGGAGCCAGGAGTTATAATA
ACGATCGAGCCCGGGGTTTACATCCCACCGGTGCCAATACTGAAAGAGAACGCCCCAGAT
AGGTACCGGGGCATCGGAATTAGGATCGAGGACGAGGTCCTCATCACCGAGTCTGGTCAC
GAGGTCCTGACGGCGTCGGTGCCGAAGGAGATCTCTCACATAACCACCCTTATGAACATG
GGTAGTAACTCCATGATGGATGCCCATGAGCTGAGGGCTGCCTGCAGTTGAGAAGTTCAG
ACAATGCTGTCCTGATGCATCATCCCTCTTCCCTCCAGCGATCTTCGCATCCAAATTCCA
ATTGACATTCATTCTTCGTTAAAGCTGAGAGATGAATCGGGATTATGAAGGCTCAAGTGG
GGTTATGGTTTTTGAGAAACCCGAACCACCCTGATCGTCTCAGGGCTGTACGGGTTTTTC
GCTGGTTTTCACGAGAAAAACCAGCTGTTTTCAGTGTTTGCAATTTTTTTTAGCTTTGTT
AAGGACTGAAATTTGTAACATACTACCTCAGATTATGTACAAATTCAGATGGTGACAGAA
ACAAAAGCACGAAATTAGGGTCACAAGAAGCCCCTGAAAGAACATGTGAAAATTCAGACG
ACAGTAATCAAAGTTTCTGAAAAAAAAAGA

consensusID : consensus_13599#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 381
fasta sequence

                              [GACAAATAAGGAATGCATAAAGCTTTGTAAACCAGGCGCAANATTAACGAGATACATAATCATTCGGTCAAGATGTTGATAAAGGGTTTCCAAGAACTTGGAATTTTAGAGAAGGGGAAATCCATCCAATACAATTATTTGAATCCAACAGCAATAGGTCACTCGTTAGGAATGGATATTCATGATTCCGTCAAGCTTAGCAAGGACAAACCCTTGGAGCCAGGAGTTGTGAGTAGATGATTCATTCATTTCTGTCTAGTTATTTAATTATTTTTAAGCTTCTTAATGATCGTTGTATGCATGCATCTGGGNTAAAACACCCAACTAACCTCCACCAACAATTTTCATANGACCTGTATTTTTNCCAAATATATTTCATGG]

[+] EMBL C26907               [GACAAATAAGGAATGCATAAAGCTTTGTAAACCAGGCGCAANATTAACGAGATACATAATCATTCGGTCAAGATGTTGATAAAGGGTTTCCAAGAACTTGGAATTTTAGAGAAGGGGAAATCCATCCAATACAATTATTTGAATCCAACAGCAATAGGTCACTCGTTAGGAATGGATATTCATGATTCCGTCAAGCTTAGCAAGGACAAACCCTTGGAGCCAGGAGTTGTGAGTAGATGATTCATTCATTTCTGTCTAGTTATTTAATTATTTTTAAGCTTCTTAATGATCGTTGTATGCATGCATCTGGGNTAAAACACCCAACTAACCTCCACCAACAATTTTCATANGACCTGTATTTTTNCCAAATATATTTCATGG]




>consensus_13599#1
GACAAATAAGGAATGCATAAAGCTTTGTAAACCAGGCGCAANATTAACGAGATACATAAT
CATTCGGTCAAGATGTTGATAAAGGGTTTCCAAGAACTTGGAATTTTAGAGAAGGGGAAA
TCCATCCAATACAATTATTTGAATCCAACAGCAATAGGTCACTCGTTAGGAATGGATATT
CATGATTCCGTCAAGCTTAGCAAGGACAAACCCTTGGAGCCAGGAGTTGTGAGTAGATGA
TTCATTCATTTCTGTCTAGTTATTTAATTATTTTTAAGCTTCTTAATGATCGTTGTATGC
ATGCATCTGGGNTAAAACACCCAACTAACCTCCACCAACAATTTTCATANGACCTGTATT
TTTNCCAAATATATTTCATGG

consensusID : consensus_13599#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 378
fasta sequence

                              [GATGTTGATAAAGGGTTTCCAAGAACTTGGAATTTTAGAGAAGGGGAAATCCATCCAATACAATTATTTGAATCCAACAGCAATAGGTCACTCGTTAGGAATGGATATTCATGATTCCGTCAAGCTTAGCAAGGACAAACCCTTGGAGCCAGGAGTTATAATAACGATCGAGCCTGGGGTTTACATCCCACCGGTGCCAATACTGAAAGAGAACGCCCCAGATAGGTACCGAGGCATCGGAATTANNATCGANNANNNNNTCCTCATCACTGAGTCCGGTCANNNNNTNCTGACGGCGTNNNTGCCGNNNNNNNTCTCTCACATAACNNNNNNNATGAACATGGGTAGTNACTCCATGATNNNATGNNATGNNNNNAN]

[+] EMBL CF196000             [GATGTTGATAAAGGGTTTCCAAGAACTTGGAATTTTAGAGAAGGGGAAATCCATCCAATACAATTATTTGAATCCAACAGCAATAGGTCACTCGTTAGGAATGGATATTCATGATTCCGTCAAGCTTAGCAAGGACAAACCCTTGGAGCCAGGAGTTATAATAACGATCGAGCCTGGGGTTTACATCCCACCGGTGCCAATACTGAAAGAGAACGCCCCAGATAGGTACCGAGGCATCGGAATTANNATCGANNANNNNNTCCTCATCACTGAGTCCGGTCANNNNNTNCTGACGGCGTNNNTGCCGNNNNNNNTCTCTCACATAACNNNNNNNATGAACATGGGTAGTNACTCCATGATNNNATGNNATGNNNNNAN]




>consensus_13599#2
GATGTTGATAAAGGGTTTCCAAGAACTTGGAATTTTAGAGAAGGGGAAATCCATCCAATA
CAATTATTTGAATCCAACAGCAATAGGTCACTCGTTAGGAATGGATATTCATGATTCCGT
CAAGCTTAGCAAGGACAAACCCTTGGAGCCAGGAGTTATAATAACGATCGAGCCTGGGGT
TTACATCCCACCGGTGCCAATACTGAAAGAGAACGCCCCAGATAGGTACCGAGGCATCGG
AATTANNATCGANNANNNNNTCCTCATCACTGAGTCCGGTCANNNNNTNCTGACGGCGTN
NNTGCCGNNNNNNNTCTCTCACATAACNNNNNNNATGAACATGGGTAGTNACTCCATGAT
NNNATGNNATGNNNNNAN

consensusID : consensus_13599#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 134
fasta sequence

                              [ATGGATTGAAGGAGTAGAAAGTACAAATTCAGATGGTGACAGAAATAAAAGCACGAAATTAGGGTCACAAGAAACCCCTGAAAGAACATGTGAAAATTCGGAGGACAGTAATCAAAGTTTCTGAAATCAAAAAA]

[-] EMBL CF330541             [ATGGATTGAAGGAGTAGAAAGTACAAATTCAGATGGTGACAGAAATAAAAGCACGAAATTAGGGTCACAAGAAACCCCTGAAAGAACATGTGAAAATTCGGAGGACAGTAATCAAAGTTTCTGAAATCAAAAAA]
[+] EMBL CF330542             [                            TCAGATGGTGACAGAAATAAAAGCACGAAATTAGGGTCACAAGAAACCCCTGAAAGAACATGTGAAAATTCGGACGACAGTAATCAAAGTTTCTGAAATCAAAAA ]




>consensus_13599#3
ATGGATTGAAGGAGTAGAAAGTACAAATTCAGATGGTGACAGAAATAAAAGCACGAAATT
AGGGTCACAAGAAACCCCTGAAAGAACATGTGAAAATTCGGAGGACAGTAATCAAAGTTT
CTGAAATCAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13599#0      GAAAAAAAAACCAGCATAGCAAAGCAAGGGTTTAGGGCGGCGGCGGCGGATTCCGCGGCG 60
consensus_13599#3      ------------------------------------------------------------
consensus_13599#2      ------------------------------------------------------------
consensus_13599#1      ------------------------------------------------------------
                                                                                   

consensus_13599#0      GCCATGGCGACGGCGGTGCGGCTCCTGCGAAGGAGCCTGCGAGGGGGCGAGGCAGCACCT 120
consensus_13599#3      ------------------------------------------------------------
consensus_13599#2      ------------------------------------------------------------
consensus_13599#1      ------------------------------------------------------------
                                                                                   

consensus_13599#0      CGGTTCTTATCCGCTTCTCAAAATTTGGTACGACTAGTTGCAAACAACACCAGATCAGTT 180
consensus_13599#3      ------------------------------------------------------------
consensus_13599#2      ------------------------------------------------------------
consensus_13599#1      ------------------------------------------------------------
                                                                                   

consensus_13599#0      GATGTTGGCCAACCAACACCCCGATCTCATCCTGAGTTATTAGCTGAAGGAGAGATTACA 240
consensus_13599#3      ------------------------------------------------------------
consensus_13599#2      ------------------------------------------------------------
consensus_13599#1      ------------------------------------------------------------
                                                                                   

consensus_13599#0      CCAGGTATCACTAGCGATGAGTACATCTTCAGAAGAAAAAAGCTTTTGGAGGTTCTGCCA 300
consensus_13599#3      ------------------------------------------------------------
consensus_13599#2      ------------------------------------------------------------
consensus_13599#1      ------------------------------------------------------------
                                                                                   

consensus_13599#0      GAGAAGAGCTTGGCCATTATTGCGTCCGCAGAGCAGCAGATGATGACTGATGTAGTGCCA 360
consensus_13599#3      ------------------------------------------------------------
consensus_13599#2      ------------------------------------------------------------
consensus_13599#1      ------------------------------------------------------------
                                                                                   

consensus_13599#0      TACTCATTCAGACAGAATGGTGATTACCTGTATATTACAGGTTGTGCACAACCTGGTGGT 420
consensus_13599#3      ------------------------------------------------------------
consensus_13599#2      ------------------------------------------------------------
consensus_13599#1      ------------------------------------------------------------
                                                                                   

consensus_13599#0      GTGGCAGTTTTAAGTGAGGAAACTGGTCTGTGTATGTTCATGCCAGATACAAGTAAGGAG 480
consensus_13599#3      ------------------------------------------------------------
consensus_13599#2      ------------------------------------------------------------
consensus_13599#1      ------------------------------------------------------------
                                                                                   

consensus_13599#0      GATGTGGTCTGGCAAGGTCAGACAGCTGGAGTTGAGGCAGCTGAGAATTTCTTCAAAGCG 540
consensus_13599#3      ------------------------------------------------------------
consensus_13599#2      ------------------------------------------------------------
consensus_13599#1      ------------------------------------------------------------
                                                                                   

consensus_13599#0      GACAAAGCATTTCCACTTAGTGAGATGCAAAAGATCCTTCCTGAAATGATTGAGCGGTCA 600
consensus_13599#3      ------------------------------------------------------------
consensus_13599#2      ------------------------------------------------------------
consensus_13599#1      ------------------------------------------------------------
                                                                                   

consensus_13599#0      AAAGTGGTATATCACAATGTAAAGACACTTTCGCCATCTTATAAGAACTTGGATTCCTTT 660
consensus_13599#3      ------------------------------------------------------------
consensus_13599#2      ------------------------------------------------------------
consensus_13599#1      ------------------------------------------------------------
                                                                                   

consensus_13599#0      CGTAGGGCATCACTCAATAATAAAGTAAAAGATATTGCATACTACACTGATGAACTGCGG 720
consensus_13599#3      ------------------------------------------------------------
consensus_13599#2      ------------------------------------------------------------
consensus_13599#1      ------------------------------------------------------------
                                                                                   

consensus_13599#0      TGGATCAAGTCAAAATCAGAAATTGGGTTGATGCGAGAATCAGCATCTATTGTTTCTCAG 780
consensus_13599#3      ------------------------------------------------------------
consensus_13599#2      ------------------------------------------------------------
consensus_13599#1      ------------------------------------------------------------
                                                                                   

consensus_13599#0      TCTCTTTTACAAACGATGTTGCTATCTAGGACCCATAGGGAGGAAAGCCAACTGGCAGCT 840
consensus_13599#3      ------------------------------------------------------------
consensus_13599#2      ------------------------------------------------------------
consensus_13599#1      ------------------------------------------------------------
                                                                                   

consensus_13599#0      AAGATCGAGTATGAGTGCAAAATGAGGGGTGCCCAAAGAATGGCGTTCCATCCTGTAGTT 900
consensus_13599#3      ------------------------------------------------------------
consensus_13599#2      ------------------------------------------------------------
consensus_13599#1      ------------------------------------------------------------
                                                                                   

consensus_13599#0      GGTGGTGGAGCAAATGGCAGTGTAATACACTACTCAAGAAATGACGGAAGGGTCAAAGCA 960
consensus_13599#3      ------------------------------------------------------------
consensus_13599#2      ------------------------------------------------------------
consensus_13599#1      ------------------------------------------------------------
                                                                                   

consensus_13599#0      GGTGAACTACTGCTCATGGATGTTGGCTGTGAGTATCATGGCTACCTTAGCGACCTGACT 1020
consensus_13599#3      ------------------------------------------------------------
consensus_13599#2      ------------------------------------------------------------
consensus_13599#1      ------------------------------------------------------------
                                                                                   

consensus_13599#0      CGAACATGGCCACCCTGTGGCAGGTTTTCACCTGCTCAGGAAGAACTATACAGCCTGATA 1080
consensus_13599#3      ------------------------------------------------------------
consensus_13599#2      ------------------------------------------------------------
consensus_13599#1      ------------------------------------------------------------
                                                                                   

consensus_13599#0      CTGGAGACAAATAAGGAATGCATAAAGCTTTGTAAACCAGGCGCAAGCATTAACGAGATA 1140
consensus_13599#3      ------------------------------------------------------------
consensus_13599#2      ------------------------------------------------------------
consensus_13599#1      ------------------------------------------------------------
                                                                                   

consensus_13599#0      CATAATCATTCGGTCAAGATGTTGATAAAGGGTTTCCAAGAACTTGGAATTTTAGAGAAG 1200
consensus_13599#3      ------------------------------------------------------------
consensus_13599#2      ------------------------------------------------------------
consensus_13599#1      ------------------------------------------------------------
                                                                                   

consensus_13599#0      GGGAAATCCATCCAATACAATTATTTGAATCCAACAGCAATAGGTCACTCGTTAGGAATG 1260
consensus_13599#3      ------------------------------------------------------------
consensus_13599#2      ------------------------------------------------------------
consensus_13599#1      ------------------------------------------------------------
                                                                                   

consensus_13599#0      GATATTCATGATTCCGTCAAGCTTAGCAAGGACAAACCCTTGGAGCCAGGAGTTATAATA 1320
consensus_13599#3      ------------------------------------------------------------
consensus_13599#2      ------------------------------------------------------------
consensus_13599#1      ------------------------------------------------------------
                                                                                   

consensus_13599#0      ACGATCGAGCCCGGGGTTTACATCCCACCGGTGCCAATACTGAAAGAGAACGCCCCAGAT 1380
consensus_13599#3      ------------------------------------------------------------
consensus_13599#2      ------------------------------------------------------------
consensus_13599#1      ------------------------------------------------------------
                                                                                   

consensus_13599#0      AGGTACCGGGGCATCGGAATTAGGATCGAGGACGAGGTCCTCATCACCGAGTCTGGTCAC 1440
consensus_13599#3      ------------------------------------------------------------
consensus_13599#2      ------------------------------------------------------------
consensus_13599#1      ------------------------------------------------------------
                                                                                   

consensus_13599#0      GAGGTCCTGACGGCGTCGGTGCCGAAGGAGATCTCTCACATAACCACCCTTATGAACATG 1500
consensus_13599#3      ------------------------------------------------------------
consensus_13599#2      ------------------------------------------------------------
consensus_13599#1      ------------------------------------------------------------
                                                                                   

consensus_13599#0      GGTAGTAACTCCATGATGGATGCCCATGAGCTGAGGGCTGCCTGCAGTTGAGAAGTTCAG 1560
consensus_13599#3      ------------------------------------------------------------
consensus_13599#2      ------------------------------------------------------------
consensus_13599#1      ------------------------------------------------------------
                                                                                   

consensus_13599#0      ACAATGCTGTCCTGATGCATCATCCCTCTTCCCTCCAGCGATCTTCGCATCCAAATTCCA 1620
consensus_13599#3      ------------------------------------------------------------
consensus_13599#2      --------------------GATGTTGATAAAGGGTTTCCAAGAACTTGGAATTTTAGAG 40
consensus_13599#1      -----------------------GACAAATAAGGAATGCATAAAGCTTTGTAAACCAGGC 37
                                                                                   

consensus_13599#0      ATTGACATTCATTCTTCGTTAAAGCTGAGAGATGAATCGGGATTATGAAGGCTCAAGTGG 1680
consensus_13599#3      ------------------------------------------------------------
consensus_13599#2      AAGGGGAAATCCATCCAATACAATTATTTGAATCCAACAGCAATAGGTCACTCGTTAGGA 100
consensus_13599#1      GCAANATTAACGAGAT-ACATAATCATTCGGTCAAGATGTTGATAAAGGGTTTCCAAGAA 96
                                                                                   

consensus_13599#0      GGTTATGGTTTTTGAGAAACCCGAACCACCCTGATCGTCTCAGGGCTGTACGGGTTTTTC 1740
consensus_13599#3      ------------------------------------------------------------
consensus_13599#2      ATGGATATTCATGATTCCGTCAAGCTTAGCAAGGACAAACCCTTGGAGCCAGGAGTTATA 160
consensus_13599#1      CTTGGAATTTTAGAGAAGGGGAAATCCATCCAATACAATTATTTGAATCCAACAGCAATA 156
                                                                                   

consensus_13599#0      GCTGGTTTTCACGAGAAAAACCAGCTGTTTTCAGTGTTTGCAATTTTTTTTAGCTTTGTT 1800
consensus_13599#3      ------------------------------------------------------------
consensus_13599#2      ATAACGATCGAGCCTGGGGTTTACATCCCACCGGTGCCAATACTGAAAGAGAACGCCCCA 220
consensus_13599#1      -----GGTCACTCGTTAGGAATGGATATTCATGATTCCGTCAAGCTTAGCAAGGACAAAC 211
                                                                                   

consensus_13599#0      AAGGACTGAAATTTGTAACATACTACCT--CAG-ATTATGTACAAATT-CAGATGGTGAC 1856
consensus_13599#3      -----------------ATGGATTGAAG--GAGTAGAAAGTACAAATT-CAGATGGTGAC 40
consensus_13599#2      GATAGGTACCGAGGCATCGGAATTANNATCGANNANNNNNTCCTCATCACTGAGTCCGGT 280
consensus_13599#1      CCTTGGAGCCAGGAGTTGTGAGTAGATG--ATTCATTCATTTCTGTCTAGTTATT-TAAT 268
                                                         *     * *         *       

consensus_13599#0      AGAAACAAAAGCACGAAATTAGGGTCACAAGAA---GCCCCTGAAAGAACATGTGA--AA 1911
consensus_13599#3      AGAAATAAAAGCACGAAATTAGGGTCACAAGAA---ACCCCTGAAAGAACATGTGA--AA 95
consensus_13599#2      CANNNNNTNCTGACGGCGTNNNTGCCGNNNNNN---NTCTCTCACATAACNNNNNN--NA 335
consensus_13599#1      TATTTTTAAGCTTCTTAATGATCGTTGTATGCATGCATCTGGGNTAAAACACCCAACTAA 328
                                    *    *    *              *      * ***         *

consensus_13599#0      ATTCAGACGACAGTAAT--CAAAGTTTC-TGAAAAAAAAAGA------------ 1950
consensus_13599#3      ATTCGGAGGACAGTAAT--CAAAGTTTC-TGAAATCAAAAAA------------ 134
consensus_13599#2      TGAACATGGGTAGTNACTCCATGATNNNATGNNATGNNNNNAN----------- 378
consensus_13599#1      CCTCCACCAACAATTTTCATANGACCTG-TATTTTTNCCAAATATATTTCATGG 381
                                  * *      *        *           *