cluster # 1361

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Oryza sativa
cluster # 1361 cluster # 1361 Sequences # 2 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1361#0 length = 1569 sequences # 2
consensusID : consensus_1361#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1569
fasta sequence
                              [CTCAACTGTTCGTCGCTGCAACAATGTTGAGTAAGATTGCAACAAGAGAAAGAACAAGAACCACTGGCACAAAATTCTCTAGACCACCGCCTCCACCCTTGGCCCGTGGAGCTCCTCTTGTAGGGGTTTTACCATCGCTTCTCGCCAATGGCCCGGTGGAATTCATCCGCCACCATTATGAGAAGATGGGAAGCGTTTTCACTGTTAGCTTGCTCCAACAGAAGGTGACTTTCTTGGTTGGGTCAGAGGCGTCAAGCCATTTTTACAAAGGGTTAGATTCAGAGATCAGCCAGGATGAGGTCTCGCAATTCACCATACCAACCTTTGGTCCCGGGGTCGCTTTTGATGTGGATTATGCCACTCGACACGAGCAGTTCCGGTTCTTTGGTGATATCATGAAGCCGGCGAAGCTGAGGACTTACGTTGATCTCATGGTTGCTGAAGTGGAGGGTTACTTTGCAAGATGGGGACAGTCCGGCACTGTGAACATGAAGCAAGAGTTTGAACAACTCGTCACCCTCATCGCTAGCCGTTGTCTACTAGGGGAGGAGGTCAGGGACAAGATGTTCGACGAGGTCTCGACGCTCCTCCGCGAGCTCAACGACGGCATGCGCCTCGTCACCATCCTGTTCCCGCGCCTCCCCATCCCGGCGCACCGCCGGCGAGACAGGGCGCGCGCCAGGCTCGGCGAGATATTCTCCGACATCGTGAGGTCCCGCAGGGGCAGCTCCGGCGGCGGCGGCGGCGGCGGCGGAGCCCGGCACGACGACATGCTGCAGTGCCTGATCGACGCGAGGTACAAGGACGGCCGCGCCACGACGGAGACGGAGGTCGCCGGGATGCTCGTCGCGGCGCTCTTCGCCGGGCAGCACACGAGCTCCAGCACCAGCACCTGGGCCGGCGCGCGCCTCCTCACCAACCCCGACCACCTCCGCGCCGCCGTGGAGGAGCAGGCGCGGCTACTCCGTCGGCACGGCGGCGACCGCGTCGACCACGCCGCCCTAGCGGCGATGGACACCCTGCAGCGCTGCGTGAAGGAGACCCTGCGGCTCCACCCGCCGGCCCTGATGCTGCTGCGCCACGCGCGGCGGAGCTTCGTCGTGCGCGGCGGCAGCGGCGAGCGCGAGTACGAGGTGCCCGAGGGCCACACGGTGGCGAGCCCGCTGCTGCTCCACAACGCGCTGCCGCGGGTGTACCGGGACCCCGGCGAGTTCGACCCGGGCAGGTTCGGCGCCGGGAGGGAGGAGGGTGCAGGTGGGCTGGCGTACACGGCGTTCGGCGGCGGGCGGCACGCGTGCGTGGGCGAGGCGTTCGCGTACATGCAGATCAAGGTGATATGGAGCCACCTGCTGCGCAACTTCGAGCTGCAGCTGGTGTCGCCGTTCCCGGAGACGGACTGGACCGTCGTCATGCCGGGGCCCAAGGGGAAGGTCATGGTCACTTACAACAGGAGGAAACTTACCTAGTTATTATCAGTTAAAACTGGAGGTATAATCATCGTATGTGTTTAAGCATGTGTAAAACATCTCATCATGTATTCTCAACTAGTACATAACTCATATCTATCTC]

[+] EMBL AK107185             [CTCAACTGTTCGTCGCTGCAACAATGTTGAGTAAGATTGCAACAAGAGAAAGAACAAGAACCACTGGCACAAAATTCTCTAGACCACCGCCTCCACCCTTGGCCCGTGGAGCTCCTCTTGTAGGGGTTTTACCATCGCTTCTCGCCAATGGCCCGGTGGAATTCATCCGCCACCATTATGAGAAGATGGGAAGCGTTTTCACTGTTAGCTTGCTCCAACAGAAGGTGACTTTCTTGGTTGGGTCAGAGGCGTCAAGCCATTTTTACAAAGGGTTAGATTCAGAGATCAGCCAGGATGAGGTCTCGCAATTCACCATACCAACCTTTGGTCCCGGGGTCGCTTTTGATGTGGATTATGCCACTCGACACGAGCAGTTCCGGTTCTTTGGTGATATCATGAAGCCGGCGAAGCTGAGGACTTACGTTGATCTCATGGTTGCTGAAGTGGAGGGTTACTTTGCAAGATGGGGACAGTCCGGCACTGTGAACATGAAGCAAGAGTTTGAACAACTCGTCACCCTCATCGCTAGCCGTTGTCTACTAGGGGAGGAGGTCAGGGACAAGATGTTCGACGAGGTCTCGACGCTCCTCCGCGAGCTCAACGACGGCATGCGCCTCGTCACCATCCTGTTCCCGCGCCTCCCCATCCCGGCGCACCGCCGGCGAGACAGGGCGCGCGCCAGGCTCGGCGAGATATTCTCCGACATCGTGAGGTCCCGCAGGGGCAGCTCCGGCGGCGGCGGCGGCGGCGGCGGAGCCCGGCACGACGACATGCTGCAGTGCCTGATCGACGCGAGGTACAAGGACGGCCGCGCCACGACGGAGACGGAGGTCGCCGGGATGCTCGTCGCGGCGCTCTTCGCCGGGCAGCACACGAGCTCCAGCACCAGCACCTGGGCCGGCGCGCGCCTCCTCACCAACCCCGACCACCTCCGCGCCGCCGTGGAGGAGCAGGCGCGGCTACTCCGTCGGCACGGCGGCGACCGCGTCGACCACGCCGCCCTAGCGGCGATGGACACCCTGCAGCGCTGCGTGAAGGAGACCCTGCGGCTCCACCCGCCGGCCCTGATGCTGCTGCGCCACGCGCGGCGGAGCTTCGTCGTGCGCGGCGGCAGCGGCGAGCGCGAGTACGAGGTGCCCGAGGGCCACACGGTGGCGAGCCCGCTGCTGCTCCACAACGCGCTGCCGCGGGTGTACCGGGACCCCGGCGAGTTCGACCCGGGCAGGTTCGGCGCCGGGAGGGAGGAGGGTGCAGGTGGGCTGGCGTACACGGCGTTCGGCGGCGGGCGGCACGCGTGCGTGGGCGAGGCGTTCGCGTACATGCAGATCAAGGTGATATGGAGCCACCTGCTGCGCAACTTCGAGCTGCAGCTGGTGTCGCCGTTCCCGGAGACGGACTGGACCGTCGTCATGCCGGGGCCCAAGGGGAAGGTCATGGTCACTTACAACAGGAGGAAACTTACCTAGTTATTATCAGTTAAAACTGGAGGTATAATCATCGTATGTGTTTAAGCATGTGTAAAACATCTCATCATGTATTCTCAACTAGTACATAACTCATATCTATCTC]
[+] EMBL CA754059             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CGGCGAGTTCGACCCGGGCAGGTTCGGCGCCGGGAGGGAGGAGGGTGCAGGTGGGCTGGCGTACACGGCGTTCGGCGGCGGGCGGCACGCGTGCGTGGGCGAGGCGTTCGCGTACATGCAGATCAAGGTGATATGGAGCCACCTGCTGCGCAACTTCGAGCTGCAGCTGGTGTCGCCGTTCCCGGAGACGGACTGGACCGTCGTCATGCCGGGGCCCAAGGGGAAGGTCATGGTCACTTACAACAGGAGGAAACTTACCTAGTTATTATCAGTTAAAACTGGAGGTATAATCATCGTATGTGTTTAAGCATGTGTAAAACATCTCATCATGTATTCTCAACTAGTACATAACTCATATCTATCTC]




>consensus_1361#0
CTCAACTGTTCGTCGCTGCAACAATGTTGAGTAAGATTGCAACAAGAGAAAGAACAAGAA
CCACTGGCACAAAATTCTCTAGACCACCGCCTCCACCCTTGGCCCGTGGAGCTCCTCTTG
TAGGGGTTTTACCATCGCTTCTCGCCAATGGCCCGGTGGAATTCATCCGCCACCATTATG
AGAAGATGGGAAGCGTTTTCACTGTTAGCTTGCTCCAACAGAAGGTGACTTTCTTGGTTG
GGTCAGAGGCGTCAAGCCATTTTTACAAAGGGTTAGATTCAGAGATCAGCCAGGATGAGG
TCTCGCAATTCACCATACCAACCTTTGGTCCCGGGGTCGCTTTTGATGTGGATTATGCCA
CTCGACACGAGCAGTTCCGGTTCTTTGGTGATATCATGAAGCCGGCGAAGCTGAGGACTT
ACGTTGATCTCATGGTTGCTGAAGTGGAGGGTTACTTTGCAAGATGGGGACAGTCCGGCA
CTGTGAACATGAAGCAAGAGTTTGAACAACTCGTCACCCTCATCGCTAGCCGTTGTCTAC
TAGGGGAGGAGGTCAGGGACAAGATGTTCGACGAGGTCTCGACGCTCCTCCGCGAGCTCA
ACGACGGCATGCGCCTCGTCACCATCCTGTTCCCGCGCCTCCCCATCCCGGCGCACCGCC
GGCGAGACAGGGCGCGCGCCAGGCTCGGCGAGATATTCTCCGACATCGTGAGGTCCCGCA
GGGGCAGCTCCGGCGGCGGCGGCGGCGGCGGCGGAGCCCGGCACGACGACATGCTGCAGT
GCCTGATCGACGCGAGGTACAAGGACGGCCGCGCCACGACGGAGACGGAGGTCGCCGGGA
TGCTCGTCGCGGCGCTCTTCGCCGGGCAGCACACGAGCTCCAGCACCAGCACCTGGGCCG
GCGCGCGCCTCCTCACCAACCCCGACCACCTCCGCGCCGCCGTGGAGGAGCAGGCGCGGC
TACTCCGTCGGCACGGCGGCGACCGCGTCGACCACGCCGCCCTAGCGGCGATGGACACCC
TGCAGCGCTGCGTGAAGGAGACCCTGCGGCTCCACCCGCCGGCCCTGATGCTGCTGCGCC
ACGCGCGGCGGAGCTTCGTCGTGCGCGGCGGCAGCGGCGAGCGCGAGTACGAGGTGCCCG
AGGGCCACACGGTGGCGAGCCCGCTGCTGCTCCACAACGCGCTGCCGCGGGTGTACCGGG
ACCCCGGCGAGTTCGACCCGGGCAGGTTCGGCGCCGGGAGGGAGGAGGGTGCAGGTGGGC
TGGCGTACACGGCGTTCGGCGGCGGGCGGCACGCGTGCGTGGGCGAGGCGTTCGCGTACA
TGCAGATCAAGGTGATATGGAGCCACCTGCTGCGCAACTTCGAGCTGCAGCTGGTGTCGC
CGTTCCCGGAGACGGACTGGACCGTCGTCATGCCGGGGCCCAAGGGGAAGGTCATGGTCA
CTTACAACAGGAGGAAACTTACCTAGTTATTATCAGTTAAAACTGGAGGTATAATCATCG
TATGTGTTTAAGCATGTGTAAAACATCTCATCATGTATTCTCAACTAGTACATAACTCAT
ATCTATCTC
clustalw multiple alignements is not computed in this case