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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13627#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 3030 fasta sequence
[CACACGGGCTATTTGCTCGCACGCCTCAGTCCACCTCCCCTGAGCTGTGCTGCTGCGCTGCGCTCTCGGACTCCTCCCAGATCCCCAATCCCCCCACGCTCTCCGGCCATCGCGGGTGGAGCAGGGCCGCCGCCGAGGGCTGGGGGGGAGCGCGAGTCCCGGGGATCCGAGCCATCTGCCGGTGGGCGGCGGCGGCGGCGGCGGAGTTGGGGTTCGTCGTCTTGGTCTTGGGTCTTCTTCGTCCCTCGCTGCGGGTGGGTAGCGCAGCGTCGGGGCAGATCCGGCTAGCCACTGCGACGCTGAATTCTGGAGATCCCCGCACATGGAGTCGCAGCGAGGGCAATCTCCTGATCGTGGATCAGACGCATCAGGACCAAAACAGTCTAGTGTTTCATCACATGGTAGACAAAGGAATTCATCATCTTCTATCTGTAAAGATTTTCTCCGGAAGTTTGTGGACAATGAACTATTGACATCAAGCCTAGAGGACTGGTTCTCTGGGCACAGTGAAGACTGTGGTTTCAAGAAGCCAGCATTTGATGTTCCTTTTGACCTAAGTGAACTACAAAATTTTGACTATGCTATAGAAGGTGTTACTTTCCAACAGCTAGTACGGATGCCAAATGCTCTTCATGCCTCAACATCAGATATTTTTGAAGCTACTGCACATCTTGCTTTGGAAGATTTTCTTCATGCAAGTATTAAGGGTTTGTGGGAAACTTTCTGGGGCCCTGATGAATCGATGCCTTTCTCTGTTGCCTGTATACACAGCACAAGCTCCAAATTTTATCCTGCTGAGAAGGCTATTAGCAGTGGGAGACTTGATGGCGTTTGTGCAACGGCTGTATTGCTGAAGAGTTTAAAGCATTCACAAGGAAGGTGGGATCATATTGTTGTACTGGCTTTGTTGAGACCTGATATTGGAATGTTTTCGGGGCAGAATGACCAACAGCCATCTCCGGCTGTTTTGGGGGAGGCACTATTCTTTGCCTTGCGTGTTCTACTTTCTCGAAGCCTTAGTAGGTCTTCCACAGTTCTTCAAAATTCAGATTGTGTTTACGTCCTTCTTGTTGATTCACAGTTTGGAGGAGTGGTAAATGTCCAAGGTGATCTGAACAAGCTTGATTTTGATTTGAACAATGTTTATGACTCTGCTGCAGAGTGGATAAAAAAGCATGCACAAATCACAGTTTCTTCCATAGACCGCGTATGGAACAAACTTGGCAATGCTAACTGGGGCGACATTGGGACTCTTCAAGTTCTCCTTGCAATTTTCCATTCAATGATCCAGTTCTGTGGTGCACCAAAGTATTCTCTTGATGAACTAGCTACAGAGCATAGTTCCCGATTACAGAGCCGAAGATCAGAAAGACATTTGGTTGGCAGGCAAGCTAATACAAATGGTTTGTTTCGATTCCAGCAGCAAAGTCATTCTCCTGAAATTGTTGAAGTACAAGAGGAGGGAGCTGTTAATGTAAAACCAAAGGAAATTTTGAAGCTTGAGGTAGGATCTGTTGTATTGATGGAGGATGCTGATTGGCAGAAGGGTTTTCAAATCAATGATATTCTTACAGACAGCGAACCTCCTATCTATAGTGCTACTCCTGTAGAAGAACCTACCAAAACCCATCTGTTGTATGTAGGCTCCAGCCCTTCTCATTTGGAGCCAGCATGGGAAGATATGAATTCTTGGTATCAAGTTCAAAGGCAGACCAAAGTA-CTTACTTTGATGAAGCAAAGAGGCATTTCAAGTAGATATGTCCCACAGATGGTTGC-TTCTGGA-CGTGTCGTCCATCCAGGCCCTTGTAACAAGCCTAACTCTAGTGGGAGTTGTGGCCATCCATGGTGCAGTACTCCAATACTTGTCACCTCGCCAGTTGGTGAAACTATTTCAAATCTGATTCGTAATGGGCTGTTTGGTGTTGAGGACGCTCTGAGATGTTGTCATGACTGTTTGTCTGCGCTTGCTGCTGCATCATCTGCAGGAATCCGTCATGGTGATATCCGGCCAGAGAATGTGATCCGTGTGAGCAATGGTTCAAGGCATCCATATTTTGTACTTATTGGATGGGGCCATGCTATCTTAGAAGACAGGGATCGGCCTCTAATGAATTTATTCTTCTCATCTACATTTGCTCTACAGGAAGGCAAGTTATGTGCAGCATCTGATGCAGAAAGCTTAATTTATCTGTTATTCTTTTGTTGTGGTGGAGTTTGCCCAGAGCTTGACTCAGTTGAAGGTGCACTTCAATGGAGGGAGACATCCTGGTCAAGGAGAGTTATACAGCAGAAGTTGGGTGATGTCTCAGCAGTGCTGAAAGCTTTTGCAGACTATGTTGACAGCATTTGTGGAACCCCATATCCGATGGACTATGAGATATGGTTGAGAAGGTTACGAAGAACCA-TCAATGAAGATCATGGCAAGGAGATTGATACATCAAGTTAGTACTGCAGCTCATGTTAGTGCGGAAGTACGATATGGAAGATCAAGAATGGTCGTTCCATA-CCCTGTATTGTTGTTGTAGATAATTTATTCGCCTGTCTCGTAAAAGGTCCATAACTTAGTATCCCCCT-CCATCTTGCTCCATTTCATCTAAAGGGTATTTCCATAGTCACAATCTGCTGCTGATATCCTCAACTTGGATTTCTGAAAATGGTGTCGCCTTTGCACAAGACTGCAGTAGAGATCTTCTGAGGATATCTGCAACATG-ATTTATTTT-------GGCGAGTGCTCCTCTTAAGTCTTTGC-TTTTCTTCGGGTC-TCG-AGTGTGTGGTATAGTTGATCAATTTTTGGTCCTTTTGCTTTTTTGAAATTGTTCCAGAATGGATTTGTGATT----AG--AGG----TGGTGTGGCAGAGTAGCATTTTGTTCTGACTAAATTATTTTGCGGGTG-CTATGTT-CC-AAGTGCACCTAGTTCTTGTAAATGTTGTTCTTGTTCAGCTGTACAAACTTCAATCATGCTAGGCTGCAACTGCTGGGTGTTGATATGTTCGATGAAATGTCAAAAAAAAAAAAGTGTTCCCCTTAAAAAAAGGG]
[+] EMBL AK100315 [CACACGGGCTATTTGCTCGCACGCCTCAGTCCACCTCCCCTGAGCTGTGCTGCTGCGCTGCGCTCTCGGACTCCTCCCAGATCCCCAATCCCCCCACGCTCTCCGGCCATCGCGGGTGGAGCAGGGCCGCCGCCGAGGGCTGGGGGGGAGCGCGAGTCCCGGGGATCCGAGCCATCTGCCGGTGGGCGGCGGCGGCGGCGGCGGAGTTGGGGTTCGTCGTCTTGGTCTTGGGTCTTCTTCGTCCCTCGCTGCGGGTGGGTAGCGCAGCGTCGGGGCAGATCCGGCTAGCCACTGCGACGCTGAATTCTGGAGATCCCCGCACATGGAGTCGCAGCGAGGGCAATCTCCTGATCGTGGATCAGACGCATCAGGACCAAAACAGTCTAGTGTTTCATCACATGGTAGACAAAGGAATTCATCATCTTCTATCTGTAAAGATTTTCTCCGGAAGTTTGTGGACAATGAACTATTGACATCAAGCCTAGAGGACTGGTTCTCTGGGCACAGTGAAGACTGTGGTTTCAAGAAGCCAGCATTTGATGTTCCTTTTGACCTAAGTGAACTACAAAATTTTGACTATGCTATAGAAGGTGTTACTTTCCAACAGCTAGTACGGATGCCAAATGCTCTTCATGCCTCAACATCAGATATTTTTGAAGCTACTGCACATCTTGCTTTGGAAGATTTTCTTCATGCAAGTATTAAGGGTTTGTGGGAAACTTTCTGGGGCCCTGATGAATCGATGCCTTTCTCTGTTGCCTGTATACACAGCACAAGCTCCAAATTTTATCCTGCTGAGAAGGCTATTAGCAGTGGGAGACTTGATGGCGTTTGTGCAACGGCTGTATTGCTGAAGAGTTTAAAGCATTCACAAGGAAGGTGGGATCATATTGTTGTACTGGCTTTGTTGAGACCTGATATTGGAATGTTTTCGGGGCAGAATGACCAACAGCCATCTCCGGCTGTTTTGGGGGAGGCACTATTCTTTGCCTTGCGTGTTCTACTTTCTCGAAGCCTTAGTAGGTCTTCCACAGTTCTTCAAAATTCAGATTGTGTTTACGTCCTTCTTGTTGATTCACAGTTTGGAGGAGTGGTAAATGTCCAAGGTGATCTGAACAAGCTTGATTTTGATTTGAACAATGTTTATGACTCTGCTGCAGAGTGGATAAAAAAGCATGCACAAATCACAGTTTCTTCCATAGACCGCGTATGGAACAAACTTGGCAATGCTAACTGGGGCGACATTGGGACTCTTCAAGTTCTCCTTGCAATTTTCCATTCAATGATCCAGTTCTGTGGTGCACCAAAGTATTCTCTTGATGAACTAGCTACAGAGCATAGTTCCCGATTACAGAGCCGAAGATCAGAAAGACATTTGGTTGGCAGGCAAGCTAATACAAATGGTTTGTTTCGATTCCAGCAGCAAAGTCATTCTCCTGAAATTGTTGAAGTACAAGAGGAGGGAGCTGTTAATGTAAAACCAAAGGAAATTTTGAAGCTTGAGGTAGGATCTGTTGTATTGATGGAGGATGCTGATTGGCAGAAGGGTTTTCAAATCAATGATATTCTTACAGACAGCGAACCTCCTATCTATAGTGCTACTCCTGTAGAAGAACCTACCAAAACCCATCTGTTGTATGTAGGCTCCAGCCCTTCTCATTTGGAGCCAGCATGGGAAGATATGAATTCTTGGTATCAAGTTCAAAGGCAGACCAAAGTA CTTACTTTGATGAAGCAAAGAGGCATTTCAAGTAGATATGTCCCACAGATGGTTGC TTCTGGA CGTGTCGTCCATCCAGGCCCTTGTAACAAGCCTAACTCTAGTGGGAGTTGTGGCCATCCATGGTGCAGTACTCCAATACTTGTCACCTCGCCAGTTGGTGAAACTATTTCAAATCTGATTCGTAATGGGCTGTTTGGTGTTGAGGACGCTCTGAGATGTTGTCATGACTGTTTGTCTGCGCTTGCTGCTGCATCATCTGCAGGAATCCGTCATGGTGATATCCGGCCAGAGAATGTGATCCGTGTGAGCAATGGTTCAAGGCATCCATATTTTGTACTTATTGGATGGGGCCATGCTATCTTAGAAGACAGGGATCGGCCTCTAATGAATTTATTCTTCTCATCTACATTTGCTCTACAGGAAGGCAAGTTATGTGCAGCATCTGATGCAGAAAGCTTAATTTATCTGTTATTCTTTTGTTGTGGTGGAGTTTGCCCAGAGCTTGACTCAGTTGAAGGTGCACTTCAATGGAGGGAGACATCCTGGTCAAGGAGAGTTATACAGCAGAAGTTGGGTGATGTCTCAGCAGTGCTGAAAGCTTTTGCAGACTATGTTGACAGCATTTGTGGAACCCCATATCCGATGGACTATGAGATATGGTTGAGAAGGTTACGAAGAACCA TCAATGAAGATCATGGCAAGGAGATTGATACATCAAGTTAGTACTGCAGCTCATGTTAGTGCGGAAGTACGATATGGAAGATCAAGAATGGTCGTTCCATA CCCTGTATTGTTGTTGTAGATAATTTATTCGCCTGTCTCGTAAAAGGTCCATAACTTAGTATCCCCCT CCATCTTGCTCCATTTCATCTAAAGGGTATTTCCATAGTCACAATCTGCTGCTGATATCCTCAACTTGGATTTCTGAAAATGGTGTCGCCTTTGCACAAGACTGCAGTAGAGATCTTCTGAGGATATCTGCAACATG ATTTATTTT GGCGAGTGCTCCTCTTAAGTCTTTGC TTTTCTTCGGGTC TCG AGTGTGTGGTATAGTTGATCAATTTTTGGTCCTTTTGCTTTTTTGAAATTGTTCCAGAATGGATTTGTGATT AG AGG TGGTGTGGCAGAGTAGCATTTTGTTCTGACTAAATTATTTTGCGGGTG CTATGTT CC AAGTGCACCTAGTTCTTGTAAATGTTGTTCTTGTTCAGCTGTACAAACTTCAATCATGCTAGGCTGCAACTGCTGGGTGTTGATATGTTCGATGAAATGTCAAAAAAAAAAAAG ]
[+] EMBL AK100111 [ GCGCTGCGCTCTCGGACTCCTCCCAGATCCCCAATCCCCCCACGCTCTCCGGCCATCGCGGGTGGAGCAGGGCCGCCGCCGAGGGCTGGGGGGGAGCGCGAGTCCCGGGGATCCGAGCCATCTGCCGGTGGGCGGCGGCGGCGGCGGCGGAGTTGGGGTTCGTCGTCTTGGTCTTGGGTCTTCTTCGTCCCTCGCTGCGGGTGGGTAGCGCAGCGTCGGGGCAGATCCGGCTAGCCACTGCGACGCTGAATTCTGGAGATCCCCGCACATGGAGTCGCAGCGAGGGCAATCTCCTGATCGTGGATCAGACGCATCAGGACCAAAACAGTCTAGTGTTTCATCACATGGTAGACAAAGGAATTCATCATCTTCTATCTGTAAAGATTTTCTCCGGAAGTTTGTGGACAATGAACTATTGACATCAAGCCTAGAGGACTGGTTCTCTGGGCACAGTGAAGACTGTGGTTTCAAGAAGCCAGCATTTGATGTTCCTTTTGACCTAAGTGAACTACAAAATTTTGACTATGCTATAGAAGGTGTTACTTTCCAACAGCTAGTACGGATGCCAAATGCTCTTCATGCCTCAACATCAGATATTTTTGAAGCTACTGCACATCTTGCTTTGGAAGATTTTCTTCATGCAAGTATTAAGGGTTTGTGGGAAACTTTCTGGGGCCCTGATGAATCGATGCCTTTCTCTGTTGCCTGTATACACAGCACAAGCTCCAAATTTTATCCTGCTGAGAAGGCTATTAGCAGTGGGAGACTTGATGGCGTTTGTGCAACGGCTGTATTGCTGAAGAGTTTAAAGCATTCACAAGGAAGGTGGGATCATATTGTTGTACTGGCTTTGTTGAGACCTGATATTGGAATGTTTTCGGGGCAGAATGACCAACAGCCATCTCCGGCTGTTTTGGGGGAGGCACTATTCTTTGCCTTGCGTGTTCTACTTTCTCGAAGCCTTAGTAGGTCTTCCACAGTTCTTCAAAATTCAGATTGTGTTTACGTCCTTCTTGTTGATTCACAGTTTGGAGGAGTGGTAAATGTCCAAGGTGATCTGAACAAGCTTGATTTTGATTTGAACAATGTTTATGACTCTGCTGCAGAGTGGATAAAAAAGCATGCACAAATCACAGTTTCTTCCATAGACCGCGTATGGAACAAACTTGGCAATGCTAACTGGGGCGACATTGGGACTCTTCAAGTTCTCCTTGCAATTTTCCATTCAATGATCCAGTTCTGTGGTGCACCAAAGTATTCTCTTGATGAACTAGCTACAGAGCATAGTTCCCGATTACAGAGCCGAAGATCAGAAAGACATTTGGTTGGCAGGCAAGCTAATACAAATGGTTTGTTTCGATTCCAGCAGCAAAGTCATTCTCCTGAAATTGTTGAAGTACAAGAGGAGGGAGCTGTTAATGTAAAACCAAAGGAAATTTTGAAGCTTGAGGTAGGATCTGTTGTATTGATGGAGGATGCTGATTGGCAGAAGGGTTTTCAAATCAATGATATTCTTACAGACAGCGAACCTCCTATCTATAGTGCTACTCCTGTAGAAGAACCTACCAAAACCCATCTGTTGTATGTAGGCTCCAGCCCTTCTCATTTGGAGCCAGCATGGGAAGATATGAATTCTTGGTATCAAGTTCAAAGGCAGACCAAAGTA CTTACTTTGATGAAGCAAAGAGGCATTTCAAGTAGATATGTCCCACAGATGGTTGC TTCTGGA CGTGTCGTCCATCCAGGCCCTTGTAACAAGCCTAACTCTAGTGGGAGTTGTGGCCATCCATGGTGCAGTACTCCAATACTTGTCACCTCGCCAGTTGGTGAAACTATTTCAAATCTGATTCGTAATGGGCTGTTTGGTGTTGAGGACGCTCTGAGATGTTGTCATGACTGTTTGTCTGCGCTTGCTGCTGCATCATCTGCAGGAATCCGTCATGGTGATATCCGGCCAGAGAATGTGATCCGTGTGAGCAATGGTTCAAGGCATCCATATTTTGTACTTATTGGATGGGGCCATGCTATCTTAGAAGACAGGGATCGGCCTCTAATGAATTTATTCTTCTCATCTACATTTGCTCTACAGGAAGGCAAGTTATGTGCAGCATCTGATGCAGAAAGCTTAATTTATCTGTTATTCTTTTGTTGTGGTGGAGTTTGCCCAGAGCTTGACTCAGTTGAAGGTGCACTTCAATGGAGGGAGACATCCTGGTCAAGGAGAGTTATACAGCAGAAGTTGGGTGATGTCTCAGCAGTGCTGAAAGCTTTTGCAGACTATGTTGACAGCATTTGTGGAACCCCATATCCGATGGACTATGAGATATGGTTGAGAAGGTTACGAAGAACCA TCAATGAAGATCATGGCAAGGAGATTGATACATCAAGTTAGTACTGCAGCTCATGTTAGTGCGGAAGTACGATATGGAAGATCAAGAATGGTCGTTCCATA CCCTGTATTGTTGTTGTAGATAATTTATTCGCCTGTCTCGTAAAAGGTCCATAACTTAGTATCCCCCT CCATCTTGCTCCATTTCATCTAAAGGGTATTTCCATAGTCACAATCTGCTGCTGATATCCTCAACTTGGATTTCTGAAAATGGTGTCGCCTTTGCACAAGACTGCAGTAGAGATCTTCTGAGGATATCTGCAACATG ATTTATTTT GGCGAGTGCTCCTCTTAAGTCTTTGC TTTTCTTCGGGTC TCG AGTGTGTGGTATAGTTGATCAATTTTTGGTCCTTTTGCTTTTTTGAAATTGTTCCAGAATGGATTTGTGATT AG AGG TGGTGTGGCAGAGTAGCATTTTGTTCTGACTAAATTATTTTGCGGGTG CTATGTT CC AAGTGCACCTAGTTCTTGTAAATGTTGTTCTTGTTCAGCTGTACAAACTTCAATCATGCTAGGCTGCAACTGCTGGGTGTTGATATGTTCGATGAAATGTCAAAAAAAAAAAAG ]
[+] EMBL CB668409 [ TGGGGCCCTGATGAATCGATGCCTTTCTCTGTTGCCTGTATACACAGCACAAGCTCCAAATTTTATCCTGCTGAGAAGGCTATTAGCAGTGGGAGACTTGATGGCGTTTGTGCAACGGCTGTATTGCTGAAGAGTTTAAAGCATTCACAAGGAAGGTGGGATCATATTGTTGTACTGGCTTTGTTGAGACCTGATATTGGAATGTTTTCGGGGCAGAATGACCAACAGCCATCTCCGGCTGTTTTGGGGGAGGCACTATTCTTTGCCTTGCGTGTTCTACTTTCTCGAAGCCTTAGTAGGTCTTCCACAGTTCTTCAAAATTCAGATTGTGTTTACGTCCTTCTTGTTGATTCACAGTTTGGAGGAGTGGTAAATGTCCAAGGTGATCTGAACAAGCTTGATTTTGATTTGAACAATGTTTATGACTCTGCTGCAGAGTGGATAAAAAAGCATGCACAAATCACAGTTTCTTCCATAGACCGCGTATGGAACAAACTTGGCAATGCTAACTGGGGCGACATTGGGACTCTTCAAGTTCTCCTTGCAATTTTCCATTCAATGATCCAGTTCTGTGGTGCACCAAAGTATTCTCTTGATGAACTAGCTACAGAGCATAGTTCCCGATTACAGAGCCGAAGATCAGAAAGACATTTGGTTGGCAGGCAAGCTAATACAAATGGTTTGTTTCGATTCCAGCAGCAAAGTCATTCTCCTGAAATTGTTGAAGTACAAGAGGAGGGAGCTGTTAATGTAAAACCAAAGGAAA ]
[+] EMBL CA765513 [ GCCATCTCCGGCTGTTTTGGGGGAGGCACTATTCTTTGCCTTGCGTGTTCTACTTTCTCGAAGCCTTAGTAGGTCTTCTACAGTTCTTCAAAATTCAGATTGTGTATACGTCCTTCTTGTCGATTCACAGTTTGGAGGAGTGGTAAATGTCCAAGGTGATCTGAACAAGCTTGATTTTGATTTGAACAATGTTTATGACTCTGCTGCTGAGTGGATAAAAAAGCATGCACAAATCACAGTTTCTTCCATAGATCGTGTATGGAACAAACTTGGGAATGCTAACTGGGGCGACATTGGGACTCTTCAAGTTCTCCTTGCAATTTTCCATTCAATGATCCAGTTCTGTGGTGCACCAAAGTATTCTCTTGATGAACTAGCTACAGAGCATAGTTCCCGATTACAGAGTCGAAGATCAGAAAGACATTTGGTTGGCAGGCAAGCTAATACAAATGGTTTGTTTCGATTCCAGCAGCAAAGCCATTCTCCTGAAATCGTTGAAGTACAAGAGGAGGGAGCTGTTAATGTAAAACCAAAGGAAATTTTGAAGCTTGAGGTAGGATCTGTTGTATTGATGGAGGATGCTGATTGGCAGAAGGGTTTTCAAATCAATGATATTCTTACAGACAGTGAGCCTCCTATCTATAGTGCTACTCCTGTAGAAGAACCCACCAAAACCCATCTGTTATATGTAGGCTNCAGCCCTTCTCATTTGGAGCCAGCATGGGAAGATATGAATTCTTGGTATCAAGNTCAAAGGCAGACCAAAGTACCTTACTCTGATGAAGCAAAGAGGCATTTCAAGTAGATNTGTCCC CANATGGNTGCTTTTTGGACCGNGTCGTCCATNCAGGCCCTTGgna ]
[+] EMBL CF326693 [ CTAACTGGGGCGACATTGGGACTCTTCAAGTTCTCCTTGCAATTTTCCATTCAATGATCCAGTTCTGTGGTGCACCAAAGTATTCTCTTGATGAACTAGCTACAGAGCATAGTTCCCGATTACAGAGCCGAAGATCAGAAAGACATTTGGTTGGCAGGCAAGCTAATACAAATGGTTTGTTTCGATTCCAGCAGCAAAGTCATTCTCCTGAAATTGTTGAAGTACAAGAGGAGGGAGCTGTTAATGTAAAACCAAAGGAAATTTTGAAGCTTGAGGTAGGATCTGTTGTATTGATGGAGGATGCTGATTGGCAGAAGGGTTTTCAAATCAATGATATTCTTACAGACAGCGAACCTCCTATCTATAGTGCTACTCCTGTAGAAGAACCTACCAAAACCCATCTGTTGTATGTAGGCTCCAGCCCTTCTCATTTGGAGCCAGCATGGGAAGATATGAATTCTTGGTATCAAGTTCAAAGGCAGACCAAAGTA CTTACTTTGATGAAGCAAAGAGGCATTTCAAGTAGATATGTCCCACAGATGGTTGC TTCTGGA CGTGTCGTCCATCCAGGCCCTTGTAACAAGCCTAACT ]
[+] EMBL BI801212 [ tcCAGAAA CTTAA TTATCTGTTATACTTTT TTGT GTGGAGTTTGCCCAGAGCTTGACTCAGTTGAAGGTGCACTTCAATGGAGGGAGACATCCTGGTCAAGGAGAGTTATACA CAGAAATTGGGTGATGTCTCA CAGTGCTGAAAGCTTTTGCAGACTATGTTGACAGCATTTGTGGAACCCCATATCCGATGGACTATGAGATATGGTTGAGAAGGTTACGAAGAACCACTCAATGAAGATCATGGCAAGGAGATTGATACATCAAGTTAGTACTGCAGCGCATGTTAGTGTGGAAGTAC ATATGGAAGATCAAGAATGGTCGTTCCATACCCCTGTATTGTTGTTGTAGATAATTTATTCGCC TCTCATAAAAGGTCCATAACTTAGTATCCCCCTCCCTTCTTGCTCCATGTCATCTAAAGGGTATTTCCATAGTCAC ATCTGCTGCTGATATCCTC ACTTGGATTTCTGAAAATGGTGTCGCCTTTGCACAAGACTGCAGTAGAGATCTTCTGAGGATATCTGC ACATG ATTTATTTT GGCGAGTGCTGCTCTTAAGTCaaaaa ]
[-] EMBL AU174966 [ ACTTCAATTGAGGGAGACATCCTGGTCAAGGAGAGTTATACAGCAGAAGTTGGGTGATGTCTCAGCAGTGCTGAAAGCTTTTGCAGACTATGTTGACAGCATTTGTGGAACCCCATATCCGATGGACTATGAGATATGGTTGANAAGGTTACGAAGAACCA TCAATGAAGATCATGGCAAGGAGATTGATACATCAAGTTAGTACTGCAGCTCATGTTAGTGCGGAAGTACGATATGGAAGATCAAGAATGGTCGTTCCATA CCCTGTATTGTTGTTGTAGATAATTTATTCGCCTGTCTCGTAAAAGGTCCATAACTTAGTATCCCCCT CCATCTTGCTCCATTTCATCTAAAGGGTATTTCCATAGTCACAATCTG ]
[-] EMBL CB668410 [ GTCAAGGAGAGTTATACAGCAGAAGTTGGGTGATGTCTCAGCAGTGCTGAAAGCTTTTGCAGACTATGTTGACAGCATTTGTGGAACCCCATATCCGATGGACTATGAGATATGGTTGAGAAGGTTACGAAGAACCA TCAATGAAGATCATGGCAAGGAGATTGATACATCAAGTTAGTACTGCAGCTCATGTTAGTGCGGAAGTACGATATGGAAGATCAAGAATGGTCGTTCCATA CCCTGTATTGTTGTTGTAGATAATTTATTCGCCTGTCTCGTAAAAGGTCCATAACTTAGTATCCCCCT CCATCTTGCTCCATTTCATCTAAAGGGTATTTCCATAGTCACAATCTGCTGTTGATATCCTCAACTTGGATTTCTGAAAATGGTGTCGCCTTTGCACAAGACTGCAGTAGAGATCTTCTGAGGATATCTGCAACATG ATTTATTTT GGCGAGTGCTCCTCTTAAGTCTTTGC TTTTCTTCGGGTC TGG AGTGTGTGGTATAGTTGATCAATTTTTGGTCCCTTTGCTTTTTTGAAATTGTTCCAGAATGGATTTGTGATT AG AGG TGGTGTGGCAGAGTAGCATTTTGTTCTGACTAAATTATTTTGCGGGTG CTATGTT CC AAGTGCACCTAGTTCTTGTAAATGTTGTTCTTGTTCAGCTGTACAAACTTCAATCATGTTAGGCTGCAACTGCTGGGTGTTGATATGTTCGAGGAAATGTCAAAAAAAAAAAGTTGTTCCCCTTAAAAAAAGGG]
[-] EMBL AU174967 [ TTGGGTGATGTCTCAGCAGTGCTGAAAGCTTTTGCAGACTATGTTGACAGCATTTGTGGAACCCCATATCCGATGGACTATGAGATATGGTTGAGAAGGTTACGAAGAACCA TCAATGAAGATCATGGCAAGGAGATTGATACATCAAGTTAGTACTGCAGCTCATGTTAGTGCGGAAGTACGATATGGAAGATCAAGAATGGTCGTTCCATA CCCTGTATTGTTGTTGTAGATAATTTATTCGCCTGTCTCGTAAAAGGTCCATAACTTAGTATCCCCCT CCATCTTGCTCCATTTCATCTAAAGGGTATTTCCATAGTCACAATCTGCTGCTGATATCCTCAACTTGGATTTCTGAAAATGGTGTCGCCTTTGCACAAGACTGCAGTAGAGATCTTCTGAGGATATCTGCAACATG ATTTATTTT GGCGAGTGCTCCTCTTAAGTCTT ]
[+] EMBL BQ907821 [ GCCTTTGCACAAGACTGCAGTAGAGATCTTCTGAGGATATCTGCAACATG ATTTATTTTTTTTTGGGGCGAGTGCTGCTCTTAAGTCATTGC TTTTCTTTGGGTC TCG AGTGTGTGGTATAGTTGATCAATTTTTGGTCCTTTTGCTTTTTTGAAATTGTTCCAGAATGGATTTGTGATTTTTAAGGAAGGGGGTTGGTGTGGCAGAGTAGCATTTTGTTCTGACTAAATTATTTTGCGGGTG CTATGTT CC AGTGCACCTAGTTCTTGTAAATGTTGTTCTTGTTCAGCTGTACAAACTTCAATCATGCTAGGCTGCAACTGCTGGGTGTTGATATGTTCGATGAAATGGCAAAAA ]
[+] EMBL AU181492 [ aAACATGAATTTATTTT GGCGAGTGCTCCTCTTAAGTCTTTGCTTTTTCTTCGGGTCTTCGNAGTGTGTGGTATAGTTGATCAATTTTTGGTCCTTTTGCTTTTTTGAAATTGTTCCAGAATGGATTTGTGATT AA AGG TGGTGTGGCANAGTAGCATTTTGTTCTGANTAAATTATTTTGCGGGTG CTATGTT CCAAAGTGCACCTAGTTCTTGTAAATGTTGTTCTTGTTCAGCTGTACAAACTTCAATCATGCTAGGCTGCAAaaaaaaaa ]
[+] EMBL BI813404 [ GCAGAGTAGCATTTTGTTCTGACTAAATTATTTTGCGGGTGCCTATGTTCCC AAGTGCACCTAGTTCTTGTAAATGTTGTTCTTGTTCAGCTGTAC AACTTCAATCATGCTAGGCTGC ACTGCTGGGTGTTGATATGTTCGATGAAATGGCAAAAA ]
consensusID : consensus_13627#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 348 fasta sequence
[ATAAGGCGGTTTTGAAAATTGGCCTTNGATTCAAAAATGCNTCTGTATGCAATTGTTNTCGAACANATTCGGNAGTTGAGTTACTGACACGACGACATGTTAGTGTGGAAGTACAATATGGAAGATCAAGAATGGTCGTTGCCATACCCTGTATTGTTGTTGTAGATAATTTATTCGCCTCTCATAAAAGGGTCCATAACTTAGTATCCCCTCATCTGCTCATGTCATCTAAGGTATTCATAGTCACAATCTGCTGCTGATATCTCACTGGATTCTGAAATGTGTCGCTTGCACAGACTGCAGTAAATCTCTGAGATATCTGCACATGATTATTGCCGATGCTGCTCT]
[+] EMBL AA751797 [ATAAGGCGGTTTTGAAAATTGGCCTTNGATTCAAAAATGCNTCTGTATGCAATTGTTNTCGAACANATTCGGNAGTTGAGTTACTGACACGACGACATGTTAGTGTGGAAGTACAATATGGAAGATCAAGAATGGTCGTTGCCATACCCTGTATTGTTGTTGTAGATAATTTATTCGCCTCTCATAAAAGGGTCCATAACTTAGTATCCCCTCATCTGCTCATGTCATCTAAGGTATTCATAGTCACAATCTGCTGCTGATATCTCACTGGATTCTGAAATGTGTCGCTTGCACAGACTGCAGTAAATCTCTGAGATATCTGCACATGATTATTGCCGATGCTGCTCT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13627#0 CACACGGGCTATTTGCTCGCACGCCTCAGTCCACCTCCCCTGAGCTGTGCTGCTGCGCTG 60
consensus_13627#1 ------------------------------------------------------------
consensus_13627#0 CGCTCTCGGACTCCTCCCAGATCCCCAATCCCCCCACGCTCTCCGGCCATCGCGGGTGGA 120
consensus_13627#1 ------------------------------------------------------------
consensus_13627#0 GCAGGGCCGCCGCCGAGGGCTGGGGGGGAGCGCGAGTCCCGGGGATCCGAGCCATCTGCC 180
consensus_13627#1 ------------------------------------------------------------
consensus_13627#0 GGTGGGCGGCGGCGGCGGCGGCGGAGTTGGGGTTCGTCGTCTTGGTCTTGGGTCTTCTTC 240
consensus_13627#1 ------------------------------------------------------------
consensus_13627#0 GTCCCTCGCTGCGGGTGGGTAGCGCAGCGTCGGGGCAGATCCGGCTAGCCACTGCGACGC 300
consensus_13627#1 ------------------------------------------------------------
consensus_13627#0 TGAATTCTGGAGATCCCCGCACATGGAGTCGCAGCGAGGGCAATCTCCTGATCGTGGATC 360
consensus_13627#1 ------------------------------------------------------------
consensus_13627#0 AGACGCATCAGGACCAAAACAGTCTAGTGTTTCATCACATGGTAGACAAAGGAATTCATC 420
consensus_13627#1 ------------------------------------------------------------
consensus_13627#0 ATCTTCTATCTGTAAAGATTTTCTCCGGAAGTTTGTGGACAATGAACTATTGACATCAAG 480
consensus_13627#1 ------------------------------------------------------------
consensus_13627#0 CCTAGAGGACTGGTTCTCTGGGCACAGTGAAGACTGTGGTTTCAAGAAGCCAGCATTTGA 540
consensus_13627#1 ------------------------------------------------------------
consensus_13627#0 TGTTCCTTTTGACCTAAGTGAACTACAAAATTTTGACTATGCTATAGAAGGTGTTACTTT 600
consensus_13627#1 ------------------------------------------------------------
consensus_13627#0 CCAACAGCTAGTACGGATGCCAAATGCTCTTCATGCCTCAACATCAGATATTTTTGAAGC 660
consensus_13627#1 ------------------------------------------------------------
consensus_13627#0 TACTGCACATCTTGCTTTGGAAGATTTTCTTCATGCAAGTATTAAGGGTTTGTGGGAAAC 720
consensus_13627#1 ------------------------------------------------------------
consensus_13627#0 TTTCTGGGGCCCTGATGAATCGATGCCTTTCTCTGTTGCCTGTATACACAGCACAAGCTC 780
consensus_13627#1 ------------------------------------------------------------
consensus_13627#0 CAAATTTTATCCTGCTGAGAAGGCTATTAGCAGTGGGAGACTTGATGGCGTTTGTGCAAC 840
consensus_13627#1 ------------------------------------------------------------
consensus_13627#0 GGCTGTATTGCTGAAGAGTTTAAAGCATTCACAAGGAAGGTGGGATCATATTGTTGTACT 900
consensus_13627#1 ------------------------------------------------------------
consensus_13627#0 GGCTTTGTTGAGACCTGATATTGGAATGTTTTCGGGGCAGAATGACCAACAGCCATCTCC 960
consensus_13627#1 ------------------------------------------------------------
consensus_13627#0 GGCTGTTTTGGGGGAGGCACTATTCTTTGCCTTGCGTGTTCTACTTTCTCGAAGCCTTAG 1020
consensus_13627#1 ------------------------------------------------------------
consensus_13627#0 TAGGTCTTCCACAGTTCTTCAAAATTCAGATTGTGTTTACGTCCTTCTTGTTGATTCACA 1080
consensus_13627#1 ------------------------------------------------------------
consensus_13627#0 GTTTGGAGGAGTGGTAAATGTCCAAGGTGATCTGAACAAGCTTGATTTTGATTTGAACAA 1140
consensus_13627#1 ------------------------------------------------------------
consensus_13627#0 TGTTTATGACTCTGCTGCAGAGTGGATAAAAAAGCATGCACAAATCACAGTTTCTTCCAT 1200
consensus_13627#1 ------------------------------------------------------------
consensus_13627#0 AGACCGCGTATGGAACAAACTTGGCAATGCTAACTGGGGCGACATTGGGACTCTTCAAGT 1260
consensus_13627#1 ------------------------------------------------------------
consensus_13627#0 TCTCCTTGCAATTTTCCATTCAATGATCCAGTTCTGTGGTGCACCAAAGTATTCTCTTGA 1320
consensus_13627#1 ------------------------------------------------------------
consensus_13627#0 TGAACTAGCTACAGAGCATAGTTCCCGATTACAGAGCCGAAGATCAGAAAGACATTTGGT 1380
consensus_13627#1 ------------------------------------------------------------
consensus_13627#0 TGGCAGGCAAGCTAATACAAATGGTTTGTTTCGATTCCAGCAGCAAAGTCATTCTCCTGA 1440
consensus_13627#1 ------------------------------------------------------------
consensus_13627#0 AATTGTTGAAGTACAAGAGGAGGGAGCTGTTAATGTAAAACCAAAGGAAATTTTGAAGCT 1500
consensus_13627#1 ------------------------------------------------------------
consensus_13627#0 TGAGGTAGGATCTGTTGTATTGATGGAGGATGCTGATTGGCAGAAGGGTTTTCAAATCAA 1560
consensus_13627#1 ------------------------------------------------------------
consensus_13627#0 TGATATTCTTACAGACAGCGAACCTCCTATCTATAGTGCTACTCCTGTAGAAGAACCTAC 1620
consensus_13627#1 ------------------------------------------------------------
consensus_13627#0 CAAAACCCATCTGTTGTATGTAGGCTCCAGCCCTTCTCATTTGGAGCCAGCATGGGAAGA 1680
consensus_13627#1 ------------------------------------------------------------
consensus_13627#0 TATGAATTCTTGGTATCAAGTTCAAAGGCAGACCAAAGTACTTACTTTGATGAAGCAAAG 1740
consensus_13627#1 ------------------------------------------------------------
consensus_13627#0 AGGCATTTCAAGTAGATATGTCCCACAGATGGTTGCTTCTGGACGTGTCGTCCATCCAGG 1800
consensus_13627#1 ------------------------------------------------------------
consensus_13627#0 CCCTTGTAACAAGCCTAACTCTAGTGGGAGTTGTGGCCATCCATGGTGCAGTACTCCAAT 1860
consensus_13627#1 ------------------------------------------------------------
consensus_13627#0 ACTTGTCACCTCGCCAGTTGGTGAAACTATTTCAAATCTGATTCGTAATGGGCTGTTTGG 1920
consensus_13627#1 ------------------------------------------------------------
consensus_13627#0 TGTTGAGGACGCTCTGAGATGTTGTCATGACTGTTTGTCTGCGCTTGCTGCTGCATCATC 1980
consensus_13627#1 ------------------------------------------------------------
consensus_13627#0 TGCAGGAATCCGTCATGGTGATATCCGGCCAGAGAATGTGATCCGTGTGAGCAATGGTTC 2040
consensus_13627#1 ------------------------------------------------------------
consensus_13627#0 AAGGCATCCATATTTTGTACTTATTGGATGGGGCCATGCTATCTTAGAAGACAGGGATCG 2100
consensus_13627#1 ------------------------------------------------------------
consensus_13627#0 GCCTCTAATGAATTTATTCTTCTCATCTACATTTGCTCTACAGGAAGGCAAGTTATGTGC 2160
consensus_13627#1 ------------------------------------------------------------
consensus_13627#0 AGCATCTGATGCAGAAAGCTTAATTTATCTGTTATTCTTTTGTTGTGGTGGAGTTTGCCC 2220
consensus_13627#1 ------------------------------------------------------------
consensus_13627#0 AGAGCTTGACTCAGTTGAAGGTGCACTTCAATGGAGGGAGACATCCTGGTCAAGGAGAGT 2280
consensus_13627#1 ------------------------------------------------------------
consensus_13627#0 TATACAGCAGAAGTTGGGTGATGTCTCAGCAGTGCTGAAAGCTTTTGCAGACTATGTTGA 2340
consensus_13627#1 ------------------------------------------------------------
consensus_13627#0 CAGCATTTGTGGAACCCCATATCCGATGGACTATGAGATATGGTTGAGAAGGTTACGAAG 2400
consensus_13627#1 --------------------ATAAGGCGGTTTTGAAAATTGGCCTTNGAT--TCAAAAAT 38
** * ** * * ** * * ** * * **
consensus_13627#0 AACCATCAATGAAGATCATGGCAAGGAGATTGATACATCAAGTTAGTACTGCAGCT-CAT 2459
consensus_13627#1 GCNTCTGTATGCAATTGTTNTCGAACANATTCGGNAGTTGAGTTACTGACACGACGACAT 98
* *** * * * * * * *** * ***** * * * ***
consensus_13627#0 GTTAGTGCGGAAGTACGATATGGAAGATCAAGAATGGTCGTT-CCATACCCTGTATTGTT 2518
consensus_13627#1 GTTAGTGTGGAAGTACAATATGGAAGATCAAGAATGGTCGTTGCCATACCCTGTATTGTT 158
******* ******** ************************* *****************
consensus_13627#0 GTTGTAGATAATTTATTCGCCTGTCTCGTAAAAGGTCCATAACTTAGTATCCCCCTCCAT 2578
consensus_13627#1 GTTGTAGATAATTTATTCGCCTCTCATA-AAAGGGTCCATAACTTAGTATCCCCT--CAT 215
********************** ** *** ********************* ***
consensus_13627#0 CTTGCTCCATTTCATCTAAAGGGTATTTCCATAGTCACAATCTGCTGCTGATATCCTCAA 2638
consensus_13627#1 CT-GCTC-ATGTCATCTAA--GGTATT--CATAGTCACAATCTGCTGCTGATATC-TCA- 267
** **** ** ******** ****** ************************** ***
consensus_13627#0 CTTGGATTTCTGAAAATGGTGTCGCCTTTGCACAAGACTGCAGTAGAGATCTTCTGAGGA 2698
consensus_13627#1 -CTGGATT-CTGAAAT--GTGTCGC--TTGCACA-GACTGCAGTAAA---TCTCTGAG-A 316
****** ****** ******* ******* ********** * ****** *
consensus_13627#0 TATCTGCAACATGATTTATTTTGGCGAGTGCTCCTCTTAAGTCTTTGCTTTTCTTCGGGT 2758
consensus_13627#1 TATCTGCA-CATGATT-ATT---GCCGATGCTGCTCT----------------------- 348
******** ******* *** ** **** ****
consensus_13627#0 CTCGAGTGTGTGGTATAGTTGATCAATTTTTGGTCCTTTTGCTTTTTTGAAATTGTTCCA 2818
consensus_13627#1 ------------------------------------------------------------
consensus_13627#0 GAATGGATTTGTGATTAGAGGTGGTGTGGCAGAGTAGCATTTTGTTCTGACTAAATTATT 2878
consensus_13627#1 ------------------------------------------------------------
consensus_13627#0 TTGCGGGTGCTATGTTCCAAGTGCACCTAGTTCTTGTAAATGTTGTTCTTGTTCAGCTGT 2938
consensus_13627#1 ------------------------------------------------------------
consensus_13627#0 ACAAACTTCAATCATGCTAGGCTGCAACTGCTGGGTGTTGATATGTTCGATGAAATGTCA 2998
consensus_13627#1 ------------------------------------------------------------
consensus_13627#0 AAAAAAAAAAAGTGTTCCCCTTAAAAAAAGGG 3030
consensus_13627#1 --------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||