These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13636#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 2165 fasta sequence [AAAAAAAGAACCATTTGCAAATTGCAAAAACGTCCTTTCTCCAGTTCTCCTCCCCTGAGCTTCTCCCAACAAGAACACCCACTTGCTCTCTTCCCCTCTCTCTCTCGCCCCTCGAATTCTGGCGGCGAAGCGTACATGGACAAAGCGGAGGAGGGCCAGTCTTCGGAGCCCGCCGATTCCGCGGCACCAGCCCAGGATGACAGTGTGCAAACTGCATCTGGGCATAATTCGCGAAGGCCAAACCTTTCTTTGCAAATACCAGCTAGGACCCTGGATAACCAAATAGGCACTTCAGCGAGAATTAATATATCCCCTAGCCCCAGCTCAACGAGAGCAGGATTGCCCCCGAGGCCTAATTCAACTAGAACAAAATCTTCTCTGAAGAGCATCATTCCGCAACAGAGTTTCAGGGCGAGAAGTTCAGCACAGGAAGGTGATCGGGCGATCCTTCTGGTTCCTGGGACACCATCAGAAGGGCAGCAGGATAATACATCAACGTTGAGATCATTTTCTTTTAGAAAAGTCATAAACTCATTATCCGCAAAACGTACACATTCTTTGCCAGTCACACCTATAGCAACTTCAGACAAAACTTCTTCTCCGGCAAATCAGATCAACAACCTACCAACCACAGATGATCAAGATGTTCAAGCAAGAATTAGGCGCTCACTTTCAGTACCAGGAAATCGTAAAAACAGGAGTTTGAGGAGGGCGGATTCATTAGGTGTCATCCGTGTGATTCCAACAACTCCCCGACCTATCCCAGTTAATACAACTGCATCAAGTGATGGGATTGAGGAGACAGTGGATGTTCCTGGAGATGGAGGCAAAGATATCCCTGAAGAAGAGGCAGTCTGCAGAATTTGTCTAGTTGAACTAAATGAAGGAGGGGAAACACTTAAAATGGAGTGCAGCTGCAAAGGGGAACTTGCTCTTGCACACCAAGACTGCGCTGTCAAATGGTTTAGCATCAAGGGAAACAAGATATGTGATGTTTGTAAGCAAGAAGTTCAAAATTTGCCTGTCACTTTGTTGAGAATACCAACTCAAACTGCTAATAGGCGAGTAACAAATGGTGCTCATCAAAGAGCCTCTCAACAATACAGATTTTGGCAGGACATTCCAATTTTGGTCATGGTTAGCATGCTTGCATACTTCTGCTTCTTGGAACAACTTCTGGTTACAGATTTGCTGTCACACGCACTGGCAATTTCGTTGCCTTTCTCATGCGTGTTGGGCCTCCTTTCTTCCATGATAGCATCCACCATGGTAACCAAGAGTTATCTATGGGCCTATGCTTCGTTCCAGTTTGCTATTGTGATACTGTTTGCTCATATCTTCTACAATGTGTTAAAAGTAAATCCAGTCCTTGCGGTCCTACTATCCTCATTCACTGGGTTTGGGATTGCTATCAGTGCGAACTCAATGCTAGTGGAATACTTGAGGTGGAGATCTAGGAGGAATCAACAGCTAGCTCAAACTGTCGATGATGGTCAGCGACAAGAACCTGGAAGTAATGCTGTAAATGAAAACAATGGTGATAGACAGCAAGCGCAGCATCGAGAATCTGGAGATAACATTGTATGACAATTCAGATTAAGAAGCGCAATGAATGTGAATAGCTAGCTTTGATATGTTCAGT-AGGTTTAGCTCGTCGAACTTCAGAATCACCTATGCAAGAATAGGAAACATGGAGCAAATTTCCAATGGCGACAGCATAAGATGATAAGAGGCT-AT-GTGACAAGT-GAGAACATGGAGAAT-G-CGGCGGATATAGTTAGGCAACA-CAGAGAGCTGAACCAAACTAT-CCA-TTGTACACGGTATTAATTTAGCAGTTTGACATCATAAGGTGTGGTTTGTTCAGTGTAAGTTTAGTAGTTCTGGTCGTCTGGTATTACAAAATTACATCACGAAAGTGAGTGCAGCTAGTGGCTAGCCATACAGATATATATACAGGTATAGGTATGTGAAATACAGTTATACCAGCTTTTACAGTTCTGTAGTCTGTGTGAGGAGAAATGTGAAGGCAGAGAATTTTAGATAATGACATATTTCAGAGTTCTGAACTTAGAAATTATTCGGGTAAAAAAATAGAGAAGAACTGTATGCAGTGCGTGGGGATTGAATTGAAATGAAATATGGAAATGATGTTCGCTTCAAAAAAAAAA] [+] EMBL AK100432 [AAAAAAAGAACCATTTGCAAATTGCAAAAACGTCCTTTCTCCAGTTCTCCTCCCCTGAGCTTCTCCCAACAAGAACACCCACTTGCTCTCTTCCCCTCTCTCTCTCGCCCCTCGAATTCTGGCGGCGAAGCGTACATGGACAAAGCGGAGGAGGGCCAGTCTTCGGAGCCCGCCGATTCCGCGGCACCAGCCCAGGATGACAGTGTGCAAACTGCATCTGGGCATAATTCGCGAAGGCCAAACCTTTCTTTGCAAATACCAGCTAGGACCCTGGATAACCAAATAGGCACTTCAGCGAGAATTAATATATCCCCTAGCCCCAGCTCAACGAGAGCAGGATTGCCCCCGAGGCCTAATTCAACTAGAACAAAATCTTCTCTGAAGAGCATCATTCCGCAACAGAGTTTCAGGGCGAGAAGTTCAGCACAGGAAGGTGATCGGGCGATCCTTCTGGTTCCTGGGACACCATCAGAAGGGCAGCAGGATAATACATCAACGTTGAGATCATTTTCTTTTAGAAAAGTCATAAACTCATTATCCGCAAAACGTACACATTCTTTGCCAGTCACACCTATAGCAACTTCAGACAAAACTTCTTCTCCGGCAAATCAGATCAACAACCTACCAACCACAGATGATCAAGATGTTCAAGCAAGAATTAGGCGCTCACTTTCAGTACCAGGAAATCGTAAAAACAGGAGTTTGAGGAGGGCGGATTCATTAGGTGTCATCCGTGTGATTCCAACAACTCCCCGACCTATCCCAGTTAATACAACTGCATCAAGTGATGGGATTGAGGAGACAGTGGATGTTCCTGGAGATGGAGGCAAAGATATCCCTGAAGAAGAGGCAGTCTGCAGAATTTGTCTAGTTGAACTAAATGAAGGAGGGGAAACACTTAAAATGGAGTGCAGCTGCAAAGGGGAACTTGCTCTTGCACACCAAGACTGCGCTGTCAAATGGTTTAGCATCAAGGGAAACAAGATATGTGATGTTTGTAAGCAAGAAGTTCAAAATTTGCCTGTCACTTTGTTGAGAATACCAACTCAAACTGCTAATAGGCGAGTAACAAATGGTGCTCATCAAAGAGCCTCTCAACAATACAGATTTTGGCAGGACATTCCAATTTTGGTCATGGTTAGCATGCTTGCATACTTCTGCTTCTTGGAACAACTTCTGGTTACAGATTTGCTGTCACACGCACTGGCAATTTCGTTGCCTTTCTCATGCGTGTTGGGCCTCCTTTCTTCCATGATAGCATCCACCATGGTAACCAAGAGTTATCTATGGGCCTATGCTTCGTTCCAGTTTGCTATTGTGATACTGTTTGCTCATATCTTCTACAATGTGTTAAAAGTAAATCCAGTCCTTGCGGTCCTACTATCCTCATTCACTGGGTTTGGGATTGCTATCAGTGCGAACTCAATGCTAGTGGAATACTTGAGGTGGAGATCTAGGAGGAATCAACAGCTAGCTCAAACTGTCGATGATGGTCAGCGACAAGAACCTGGAAGTAATGCTGTAAATGAAAACAATGGTGATAGACAGCAAGCGCAGCATCGAGAATCTGGAGATAACATTGTATGACAATTCAGATTAAGAAGCGCAATGAATGTGAATAGCTAGCTTTGATATGTTCAGT AGGTTTAGCTAGTCGAACTTCAGAATCACCTATGCAAGAATAGGAAACATGGAGCAAATTTCCAATGGCGACAGCATAAGATGATAAGAGGCT AT GTGACAAGT GAGAACATGGAGAAT G CGGCGGATATAGTTAGGCAACA CAGAGAGCTGAACCAAACTAT CCA TTGTACACGGTATTAATTTAGCAGTTTGACATCATAAGGTGTGGTTTGTTCAGTGTAAGTTTAGTAGTTCTGGTCGTCTGGTATTACAAAATTACATCACGAAAGTGAGTGCAGCTAGTGGCTAGCCATACAGATATATATACAGGTATAGGTATGTGAAATACAGTTATACCAGCTTTTACAGTTCTGTAGTCTGTGTGAGGAGAAATGTGAAGGCAGAGAATTTTAGATAATGACATATTTCAGAGTTCTGAACTTAGAAATTATTCGGGTAAAAAAATAGAGAAGAACTGTATGCAGTGCGTGGGGATTGAATTGAAATGAAATATGGAAATGA ] [+] EMBL CB624758 [ GCGCCTTAGCGTACATGGACAAAGCGGAGGAGGGCCAGTCTTCGGAGCCCGCCGATTCCGCGGCACCAGCCCAGGATGACAGTGTGCAAACTGCATCTGGGCATAATTCGCGAAGGCCAAACCTTTCTTTGCAAATACCAGCTAGGACCCTGGATAACCAAATAGGCACTTCAGCGAGAATTAATATATCCCCTAGCCCCAGCTCAACGAGAGCAGGATTGCCCCCGAGGCCTAATTCAACTAGAACAAAATCTTCTCTGAAGAGCATCATTCCGCAACAGAGTTTCAGGGCGAGAAGTTCAGCACAGGAAGGTGATCGGGCGATCCTTCTGGTTCCTGGGACACCATCTGAAGGGCAGCAGGATAATACATCAACGTTGAGATCATTTTCTTTTAGAAAAGTCATAAACTCGTTATCCGCAAAACGTACACATTCTTTGCCAGTCACACCTATAGCAACTTCAGACGAAACTTCTTCTCCGGCAAATCAGATCAACAACCTACCAACCACAGATGATCAAGATGTTCAAGCAAGAATTATGCGCTCACTTTCAGTACCAGGAAATCGTAAAAACAGGAGTTTGAGGAGGGCGGATTCATTATGTGTCATCCGTGTGATTCCAACAACTCCCCGACCTATCCCAGTTAATACAACTGCATCAAGTGATGGGATTGAGGAGACAGTGGATGTTCCTGGAGATGGAGGCGAAGATATCCCTGAAGAAGAGGCAGTCTGCATAATTTGTCTAGT ] [+] EMBL CB626869 [ CGTACATGGACAAAGCGGAGGAGGGCCAGTCTTCGGAGCCCGCCGATTCCGCGGCACCAGCCCAGGATGACAGTGTGCAAACTGCATCTGGGCATAATTCGCGAAGGCCAAACCTTTCTTTGCAAATACCAGCTAGGACCCTGGATAACCAAATAGGCACTTCAGCGAGAATTAATATATCCCCTAGCCCCAGCTCAACGAGAGCAGGATTGCCCCCGAGGCCTAATTCAACTAGAACAAAATCTTCTCTGAAGAGCATCATTCCGCAACAGAGTTTCAGGGCGAGAAGTTCAGCACAGGAAGGTGATCGGGCGATCCTTCTGGTTCCTGGGACACCATCAGAAGGGCAGCAGGATAATACATCAACGTTGAGATCATTTTCTTTTAGAAAAGTCATAAACTCGTTATCCGCAAAACGTACACATTCTTTGCCAGTCACACCTATAGCAACTTCAGACAAAACTTCTTCTCCGGCAAATCAGATCAACAACCTACCAACCACAGATGATCAAGATGTTCAAGCAAGAATTAGGCGCTCACTTTCAGTACCAGGAAATCGTAAAAACAGGAGTTTGAGGAGGGCGGATTCATTAGGTGTCATCCGTGTGATTCCAACAACTCCCCGACCTATCCCAGTTAATACAACTGCATCAAGTGATGGGATTGAGGAGACAGT ] [+] EMBL CB664853 [ ACATGGACAAAGCGGAGGAGGGCCAGTCTTCGGAGCCCGCCGATTCCGCGGCACCAGCCCAGGATGACAGTGTGCAAACTGCATCTGGGCATAATTCGCGAAGGCCAAACCTTTCTTTGCAAATACCAGCTAGGACCCTGGATAACCAAATAGGCACTTCAGCGAGAATTAATATATCCCCTAGCCCCAGCTCAACGAGAGCAGGATTGCCCCCGAGGCCTAATTCAACTAGAACAAAATCTTCTCTGAAGAGCATCATTCCGCAACAGAGTTTCAGGGCGAGAAGTTCAGCACAGGAAGGTGATCGGGCGATCCTTCTGGTTCCTGGGACACCATCAGAAGGGCAGCAGGATAATACATCAACGTTGAGATCATTTTCTTTTAGAAAAGTCATAAACTCATTATCCGCAAAACGTACACATTCTTTGCCAGTCACACCTATAGCAACTTCAGACAAAACTTCTTCTCCGGCAAATCAGATCAACAACCTACCAACCACAGATGATCAAGATGTTCAAGCAAGAATTAGGCGCTCACTTTCAGTACCAGGAAATCGTAAAAACAGGAGTTTGAGGAGGGCGGATTCATTAGGTGTCATCCGTGTGATTCCAACAACTCCCCGACCTATCCCAGTTAATACAACTGCATCAAGTGATGGGATTGAGGAGACAGTGGATGTTCCTGGAGATGGAGGCAAAGATATCCCTGAAGAAGAGGCAGTCTGCAGAATTTGTCTAGTTGAACTAAATGAACGAGGGGACACACTTAAAATGGAGTGCAGCTGCTAAGGGGAACTTGCTCTTGCACACCA ] [-] EMBL CB664854 [ ATCGTCATTCACTGGGTTTGGGATTGCTATCAGTGCGAACTCAATGCTAGTGGAATACTTGAGGTGGAGATCTAGGAGGAATCAACAGCTAGCTCAAACTGTCGATGATGGTCAGCGACACGAACCTGGAAGTAATGCTGTAAATGAAAACAATGGTGATAGACAGCAAGCGCAGCATCGAGAATCTGGAGATAACATTGTATGACAATTCAGATTAAGAAGCGCAATGAATGTGAATAGCTAGCTTTGATATGTTCAGT AGGTTTAGCTCGTCGAACTTCAGAATCACCTATGCAAGAATAGGAAACATGGAGCAAATTTCCAATGGCGACAGCATAAGATGATAAGAGGCT AT GTGACAAGT GAGAACATGGAGAAT G CGGCGGATATAGTTAGGCAACA CAGAGAGCTGAACCAAACTAT CCA TTGTACACGGTATTAATTTAGCAGTTTGACATCATAAGGTGTGGTTTGTTCAGTGTAAGTTTAGTAGTTCTGGTCGTCTGGTATTACAAAATTACATCACGAAAGTGAGTGCAGCTAGTGGCTAGCCATACAGATATATATACAGGTATAGGTATGTGAAATACAGTTATACCAGCTTTTACAGTTCTGTAGTCTGTGTGAGGAGAAATGTGAAGGCAGAGAATTTTAGATAATGACATATTTCAGAGTTCTGAACTTAGAAATTATTCGGGTAAAAAAATAGAGAAGAACTGTATGCAGTGCGTGGGGATTGAATTGAAATGAAATATGGAAATGATGTTCGCTTCAAA ] [+] EMBL CA766557 [ TGGTGATAGACAGCAAGCGCAGCATCGAGAATCTGGAGATAACATTGTATGACAATTCAGATTAAGAAGCGCAATGAATGTGAATAGCTAGCTTTGATATGTTCAGT AGGTTTAGCTCGTCGAACTTCAGAATCACCTATGCAAGAATAGGAAACATGGAGCAAATTTCCAATGGCGACAGCATAAGATGATAAGAGGCT AT GTGACAAGT GAGAACATGGAGAAT G CGGCGGATATAGTTAGGCAACA CAGAGAGCTGAACCAAACTAT CCA TTGTACGCGGTATTAATTTAGCAGTTTGACATCATAAGGTGTGGTTTGTTCAGTGTAAGTTTAGTAGTTCTGGTCGTCTGGTATTACAAAATTACATCACGAAAGTGAGTGCAGCTAGTGGCTAGCCATACAGATATATATACAGGTATAGGTATGTGAAATACAGTTATACCAGCTTTTACAGTTCTGTAGTCTGTGTGAGGAGAAATGTGAAGGCAGAGAATTTTAGATAATGACATATTTCAGAGTTCTGAAC ] [+] EMBL BQ906087 [ TAGACAGCAAGCGCAGCATCGAGAATCTGGAGATAACCTTGTATGACNATTCAGATTAAGAAGCGCAATGAATGTGAATAGCTAGCTTTGATATGTTCAGTGAGGTTTAGCTCGTCGAACTTCAGAATCACCTATGCAAGAATAGGAAACATGGAGCAAATTTCCAATGGCGACAGCATAAGATGATAAGAGGCTGATGGTGACAAGTGGAGAACATGGAGAATGG CGGCGGATATAGTTAGGCAACA CAGAGAGCTGAACC AACTATGCCA TTGTACACGGTATTAATTTAGCAGTTTGACATCATAAGGTGTGGTTTGTTCAGTGTAAGTTTAGTAGTTCTGGTCGTCTGGTATTACAAAATTACATCACGAAAGTGAGTGCAGCTAGTGGCTAGCCATACAGATATATATACAGGTATAGGTATGTGAAATACAGTTATACCAGCTTTTACAGTTCTGTAGTCTGTGTGAGGAGAAANCTGAAGGCAGAGAATTTTAGATAAT ] [-] EMBL CF278708 [ AGGAAACATGGAGCAAATTTCCAATGGCGACAGCATAAGATGATAAGAGGCT AT GTGACAAGT GAGAACATGGAGAAT G CGGCGGATATAGTTAGGCAACA CAGAGAGCTGAACCAAACTAT CCA TTGTACACGGTATTAATTTAGCAGTTTGACATCATAAGGTGTGGTTTGTTCAGTGTAAGTTTAGTAGTTCTGGTCGTCTGGTATTACAAAATTACATCACGAAAGTGAGTGCAGCTAGTGGCTAGCCATACAGATATATATACAGGTATAGGTATGTGAAATACAGTTATACCAGCTTTTACAGTTCTGTAGTCTGTGTGAGGAGAAATGTGAAGGCAGAGAATTTTAGATAATGACATATTTCAGAGTTCTGAACTTAGAAATTATTCGGGTAAAAAAA ] [+] EMBL BI812810 [ atGCCACCCCATAAGATGATAAGAGGCT AT GTGACAAGT GAGAACATGGAGAAT CGGCGGATATAGTTAGGCAACA CAGAGAGCTGAACCCAACTAT CCACTTGTACCCGGTATTAATTTA CAGTTTGACATCATAAGGTGTGGTTTGTTCAGTGTAAGTTTAGTAGTTCTGGTCGTCTGGTATTAC AAATTACATCACGAAAGTGAGTGCAGCTAGTGGCTAGCCATACAGATATATATACAGGTATAGGTATGTGAAATACAGTTATACCAGCTTTTACAGTTCTGTAGTCTGTGTGAGGAGAAATGTGAAGGCAGAGAATTTTAGATAATGACATATTTCAGAGTTCTGAACTTAGAAATTATTCGGGTAAAAAGATAGAGAAGAACTGTATGCCGTGCGTGGGGATTGAATTGAAATGAAATATGGAAATGATGTTCGCTTCAAAAAAAAAA] [+] EMBL BQ908719 [ ccgGGAGAAT GTCGGCGGATATAGTTAGGCAACACCAGAGAGCTGAACCCAACTAT CCA TTGTACACGGTATTAATTTAGCAGTTTGACATCATAAGGTGTGGTTTGTTCAGTGTAAGTTTAGTAGTTCTGGTCGTCTGGTATTACAAAATTACATCACGAAAGTGAGTGCAGCTAGTGGCTAGCCATACAGATATATATACAGGTATAGGTATGTGAAATACAGTTATACCAGCTTTTACAGTTCTGTAGTCTGTGTGAGGAGAAATGTGAAGGCAGAGAATTTTAGATAATGACATATTTCAGAGTTCTGAACTTAGAAATTATTCGGGTAAAAAGATAGAGAAGAACTGTATGCAGTGCGTGGGGATTGAATTGAAATGAAATATGGAAATGATGTTCGCTTCAAAAAAAAA ] consensusID : consensus_13636#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 877 fasta sequence [AGGCCATAAGGTACATGTCTGCTGGTGCTACTCCATGTATGCTCGGTAGCTCAGATGAGTGCCATGAGCTTCATTAAATTGTATCGGCTCAAGAATCACTATTTATCCCTGATGATTGATGCCTTTACCTTGTTCATATTCCATTAGTCTTGCAAGTTTAATTTAATGGAATTTATGTAGCATAGCTTGCTGATAATACTGTTTGCTGACTTTGTAGGCACCAGCCCAGGATGACAGTGTGCAAACTGCATCTGGGCATAATTCGCGAAGGCCAAACCTTTCTTTGCAAATACCAGCTAGGACCCTGGATAACCAAATAGGCGCTTCAGCGAGAATTAATATATCCCCTAGCCCCAGCTCAACGAGAGCAGGATTGCCCCCGAGGCCTAATTCAACTAGAACAAAATCTTCTCTGAAGAGCATCATTCCGCAACAGAGTTTCAGGGCGAGAAGTTCAGCACAGGAAGGTGATCGGGCGATCCTTCTGGTTCCTGGGACACCATCAGAAGGGCAGCAGGATAATACATCAACGTTGAGATCATTTTCTTTTAGAAAAGTCATAAACTCGTTATCCGCAAAACGTACACATTCTTTGCCAGTCACACCTATAGCAACTTCAGACAAAACTTCTTCTCCGGCAAATCAGATCAACAACCTACCAACCACAGATGATCAAGATGNTCAAGCAAGAATTAGGCGCTCACTTTCAGTACCAGGGAAATCGTAAAAACAGGAGTTTGAGGAGGGCGGGATTCATTANGTGTCATTCCGNGGGGATTNCAACAACTNCCCGACCCTATNCCAGTTAATACAACTGCATCAAGNGATGGGATTGAGGANACAGNGGGATGTTNCTGGAGATGGGAGGCGAAANATT] [+] EMBL CA765522 [AGGCCATAAGGTACATGTCTGCTGGTGCTACTCCATGTATGCTCGGTAGCTCAGATGAGTGCCATGAGCTTCATTAAATTGTATCGGCTCAAGAATCACTATTTATCCCTGATGATTGATGCCTTTACCTTGTTCATATTCCATTAGTCTTGCAAGTTTAATTTAATGGAATTTATGTAGCATAGCTTGCTGATAATACTGTTTGCTGACTTTGTAGGCACCAGCCCAGGATGACAGTGTGCAAACTGCATCTGGGCATAATTCGCGAAGGCCAAACCTTTCTTTGCAAATACCAGCTAGGACCCTGGATAACCAAATAGGCGCTTCAGCGAGAATTAATATATCCCCTAGCCCCAGCTCAACGAGAGCAGGATTGCCCCCGAGGCCTAATTCAACTAGAACAAAATCTTCTCTGAAGAGCATCATTCCGCAACAGAGTTTCAGGGCGAGAAGTTCAGCACAGGAAGGTGATCGGGCGATCCTTCTGGTTCCTGGGACACCATCAGAAGGGCAGCAGGATAATACATCAACGTTGAGATCATTTTCTTTTAGAAAAGTCATAAACTCGTTATCCGCAAAACGTACACATTCTTTGCCAGTCACACCTATAGCAACTTCAGACAAAACTTCTTCTCCGGCAAATCAGATCAACAACCTACCAACCACAGATGATCAAGATGNTCAAGCAAGAATTAGGCGCTCACTTTCAGTACCAGGGAAATCGTAAAAACAGGAGTTTGAGGAGGGCGGGATTCATTANGTGTCATTCCGNGGGGATTNCAACAACTNCCCGACCCTATNCCAGTTAATACAACTGCATCAAGNGATGGGATTGAGGANACAGNGGGATGTTNCTGGAGATGGGAGGCGAAANATT] consensusID : consensus_13636#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 641 fasta sequence [TGACTGGACTGAAGGAGTAGAAAAACACCCACTTGCTCTCTTCCCCTCTCTCTCTCGCCCCTCGAATTCTGGCGGCGAAGCGTACATGGACAAAGCGGAGGAGGGCCAGTCTTCGGAGCCCGCCGATTCCGCGGCACCAGCCCAGGATGACAGTGTGCAAACTGCATCTGGGCATAATTCGCGAAGGCCAAACCTTTCTTTGCAAATACCAGCTAGGACCCTGGATAACCAAATAGGCACTTCAGCGAGAATTAATATATCCCCTAGCCCCAGCTCAACGAGAGCAGGATTGCCCCCGAGGCCTAATTCAACTAGAACAAAATCTTCTCTGAAGAGCATCATTCCGCAACAGAGTTTCAGGGCGAGAAGTTCAGCACAGGAAGGTGATCGGGCGATCCTTCTGGTTCCTGGGACACCATCAGAAGGGCAGCAGGATAATACATCAACGTTGAGATCATTTTCTTTTAGAAAAGTCATAAACTCATTATCCGCAAAACGTACACATTCTTTGCCAGTCACACCTATAGCAACTTCAGACAAAACTTCTTCTCCGGCAAATCAGATCAACAACCTACCAACCACAGATGATCAAGATGTTCAAGCAAGAATTAGGCGCTCACTTTCAGTACCAGGAAATCGTA] [+] EMBL CF278707 [TGACTGGACTGAAGGAGTAGAAAAACACCCACTTGCTCTCTTCCCCTCTCTCTCTCGCCCCTCGAATTCTGGCGGCGAAGCGTACATGGACAAAGCGGAGGAGGGCCAGTCTTCGGAGCCCGCCGATTCCGCGGCACCAGCCCAGGATGACAGTGTGCAAACTGCATCTGGGCATAATTCGCGAAGGCCAAACCTTTCTTTGCAAATACCAGCTAGGACCCTGGATAACCAAATAGGCACTTCAGCGAGAATTAATATATCCCCTAGCCCCAGCTCAACGAGAGCAGGATTGCCCCCGAGGCCTAATTCAACTAGAACAAAATCTTCTCTGAAGAGCATCATTCCGCAACAGAGTTTCAGGGCGAGAAGTTCAGCACAGGAAGGTGATCGGGCGATCCTTCTGGTTCCTGGGACACCATCAGAAGGGCAGCAGGATAATACATCAACGTTGAGATCATTTTCTTTTAGAAAAGTCATAAACTCATTATCCGCAAAACGTACACATTCTTTGCCAGTCACACCTATAGCAACTTCAGACAAAACTTCTTCTCCGGCAAATCAGATCAACAACCTACCAACCACAGATGATCAAGATGTTCAAGCAAGAATTAGGCGCTCACTTTCAGTACCAGGAAATCGTA] [+] EMBL CF306097 [ TGGCGGTGAAGCGTACATGGACAAAGCGGAGGAGGGCCAGTCTTCGGAGCCCGCCGATTCCGCGGCACCAACCCAGGATGACAGTGTGCAAACTGCATCTGGGCATAATTCGCGAAGGCCAAACCTTTCTTTGTTAGT CATTTAGGACCCTGGATAACCAAATAGGCACTTCAGCGAGATTTAATATATCCCCTAGCCCCAGCTCAACGAGAGCAGGATTGCCCCCGAGGCCTAATTCAACTAGAACAAAATCTTCTCTGAAGAGCATCATTCCGCAACAGAGTTTCAGGGCGAGAAGTTCAGCACAGGAAGGTGATCGGGCGATCCTTCTGGTTCCTGGGACACCATCAGAAGGGCAGCAGGATAATACATCAACGTTGAGATCATTATCTTTTAGAAAAGTCATAAACTCATTATCCGCAAAAC ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13636#0 --------------------AAAAAAAGAACCATTTGCAAATTGCAAAAACGTCCTTTCT 40 consensus_13636#2 ------------------------------------------------------------ consensus_13636#1 AGGCCATAAGGTACATGTCTGCTGGTGCTACTCCATGTATGCT-CGGTAGCTCAGATGAG 59 consensus_13636#0 CCAGTTCTCCTCCCCTGAGCTTCTCCCA-ACAAGAACACCCACTTGCTCTCTTCCCCTCT 99 consensus_13636#2 -----------TGACTGGACTGAAGGAGTAGAAAAACACCCACTTGCTCTCTTCCCCTCT 49 consensus_13636#1 TGCCATGAGCTTCATTAAATTGTATCGGCTCAAGAATCACTATTTATCCCTGATGATTGA 119 * * ** ** * * ** * * consensus_13636#0 CTCTCTCGCCCC--TCGAATTCTGGCGGCG----AAGCGTACATGGACAAAGCGGAGGAG 153 consensus_13636#2 CTCTCTCGCCCC--TCGAATTCTGGCGGCG----AAGCGTACATGGACAAAGCGGAGGAG 103 consensus_13636#1 TGCCTTTACCTTGTTCATATTCCATTAGTCTTGCAAGTTTAATTTAATGGAATTTATGTA 179 * * ** ** **** * *** ** * * * * * consensus_13636#0 GGCCAGTCTTCGGA-------GCCCGCCGATTCCGC-GGCACCAGCCCAGGATGACAGTG 205 consensus_13636#2 GGCCAGTCTTCGGA-------GCCCGCCGATTCCGC-GGCACCAGCCCAGGATGACAGTG 155 consensus_13636#1 GCATAGCTTGCTGATAATACTGTTTGCTGACTTTGTAGGCACCAGCCCAGGATGACAGTG 239 * ** * * ** * ** ** * * *********************** consensus_13636#0 TGCAAACTGCATCTGGGCATAATTCGCGAAGGCCAAACCTTTCTTTGCAAATACCAGCTA 265 consensus_13636#2 TGCAAACTGCATCTGGGCATAATTCGCGAAGGCCAAACCTTTCTTTGCAAATACCAGCTA 215 consensus_13636#1 TGCAAACTGCATCTGGGCATAATTCGCGAAGGCCAAACCTTTCTTTGCAAATACCAGCTA 299 ************************************************************ consensus_13636#0 GGACCCTGGATAACCAAATAGGCACTTCAGCGAGAATTAATATATCCCCTAGCCCCAGCT 325 consensus_13636#2 GGACCCTGGATAACCAAATAGGCACTTCAGCGAGAATTAATATATCCCCTAGCCCCAGCT 275 consensus_13636#1 GGACCCTGGATAACCAAATAGGCGCTTCAGCGAGAATTAATATATCCCCTAGCCCCAGCT 359 *********************** ************************************ consensus_13636#0 CAACGAGAGCAGGATTGCCCCCGAGGCCTAATTCAACTAGAACAAAATCTTCTCTGAAGA 385 consensus_13636#2 CAACGAGAGCAGGATTGCCCCCGAGGCCTAATTCAACTAGAACAAAATCTTCTCTGAAGA 335 consensus_13636#1 CAACGAGAGCAGGATTGCCCCCGAGGCCTAATTCAACTAGAACAAAATCTTCTCTGAAGA 419 ************************************************************ consensus_13636#0 GCATCATTCCGCAACAGAGTTTCAGGGCGAGAAGTTCAGCACAGGAAGGTGATCGGGCGA 445 consensus_13636#2 GCATCATTCCGCAACAGAGTTTCAGGGCGAGAAGTTCAGCACAGGAAGGTGATCGGGCGA 395 consensus_13636#1 GCATCATTCCGCAACAGAGTTTCAGGGCGAGAAGTTCAGCACAGGAAGGTGATCGGGCGA 479 ************************************************************ consensus_13636#0 TCCTTCTGGTTCCTGGGACACCATCAGAAGGGCAGCAGGATAATACATCAACGTTGAGAT 505 consensus_13636#2 TCCTTCTGGTTCCTGGGACACCATCAGAAGGGCAGCAGGATAATACATCAACGTTGAGAT 455 consensus_13636#1 TCCTTCTGGTTCCTGGGACACCATCAGAAGGGCAGCAGGATAATACATCAACGTTGAGAT 539 ************************************************************ consensus_13636#0 CATTTTCTTTTAGAAAAGTCATAAACTCATTATCCGCAAAACGTACACATTCTTTGCCAG 565 consensus_13636#2 CATTTTCTTTTAGAAAAGTCATAAACTCATTATCCGCAAAACGTACACATTCTTTGCCAG 515 consensus_13636#1 CATTTTCTTTTAGAAAAGTCATAAACTCGTTATCCGCAAAACGTACACATTCTTTGCCAG 599 **************************** ******************************* consensus_13636#0 TCACACCTATAGCAACTTCAGACAAAACTTCTTCTCCGGCAAATCAGATCAACAACCTAC 625 consensus_13636#2 TCACACCTATAGCAACTTCAGACAAAACTTCTTCTCCGGCAAATCAGATCAACAACCTAC 575 consensus_13636#1 TCACACCTATAGCAACTTCAGACAAAACTTCTTCTCCGGCAAATCAGATCAACAACCTAC 659 ************************************************************ consensus_13636#0 CAACCACAGATGATCAAGATGTTCAAGCAAGAATTAGGCGCTCACTTTCAGTACCAGG-A 684 consensus_13636#2 CAACCACAGATGATCAAGATGTTCAAGCAAGAATTAGGCGCTCACTTTCAGTACCAGG-A 634 consensus_13636#1 CAACCACAGATGATCAAGATGNTCAAGCAAGAATTAGGCGCTCACTTTCAGTACCAGGGA 719 ********************* ************************************ * consensus_13636#0 AATCGTAAAAACAGGAGTTTGAGGAGGGCGG-ATTCATTAGGTGTCATCC--GTGTGATT 741 consensus_13636#2 AATCGTA----------------------------------------------------- 641 consensus_13636#1 AATCGTAAAAACAGGAGTTTGAGGAGGGCGGGATTCATTANGTGTCATTCCGNGGGGATT 779 ******* consensus_13636#0 CCAACAACTCCCCGACC-TATCCCAGTTAATACAACTGCATCAAGTGATGGGATTGAGGA 800 consensus_13636#2 ------------------------------------------------------------ consensus_13636#1 NCAACAACTNCCCGACCCTATNCCAGTTAATACAACTGCATCAAGNGATGGGATTGAGGA 839 consensus_13636#0 GACAGTGG-ATGTTCCTGGAGATGGAGGCAAAGATATCCCTGAAGAAGAGGCAGTCTGCA 859 consensus_13636#2 ------------------------------------------------------------ consensus_13636#1 NACAGNGGGATGTTNCTGGAGATGGGAGGCGAAANATT---------------------- 877 consensus_13636#0 GAATTTGTCTAGTTGAACTAAATGAAGGAGGGGAAACACTTAAAATGGAGTGCAGCTGCA 919 consensus_13636#2 ------------------------------------------------------------ consensus_13636#1 ------------------------------------------------------------ consensus_13636#0 AAGGGGAACTTGCTCTTGCACACCAAGACTGCGCTGTCAAATGGTTTAGCATCAAGGGAA 979 consensus_13636#2 ------------------------------------------------------------ consensus_13636#1 ------------------------------------------------------------ consensus_13636#0 ACAAGATATGTGATGTTTGTAAGCAAGAAGTTCAAAATTTGCCTGTCACTTTGTTGAGAA 1039 consensus_13636#2 ------------------------------------------------------------ consensus_13636#1 ------------------------------------------------------------ consensus_13636#0 TACCAACTCAAACTGCTAATAGGCGAGTAACAAATGGTGCTCATCAAAGAGCCTCTCAAC 1099 consensus_13636#2 ------------------------------------------------------------ consensus_13636#1 ------------------------------------------------------------ consensus_13636#0 AATACAGATTTTGGCAGGACATTCCAATTTTGGTCATGGTTAGCATGCTTGCATACTTCT 1159 consensus_13636#2 ------------------------------------------------------------ consensus_13636#1 ------------------------------------------------------------ consensus_13636#0 GCTTCTTGGAACAACTTCTGGTTACAGATTTGCTGTCACACGCACTGGCAATTTCGTTGC 1219 consensus_13636#2 ------------------------------------------------------------ consensus_13636#1 ------------------------------------------------------------ consensus_13636#0 CTTTCTCATGCGTGTTGGGCCTCCTTTCTTCCATGATAGCATCCACCATGGTAACCAAGA 1279 consensus_13636#2 ------------------------------------------------------------ consensus_13636#1 ------------------------------------------------------------ consensus_13636#0 GTTATCTATGGGCCTATGCTTCGTTCCAGTTTGCTATTGTGATACTGTTTGCTCATATCT 1339 consensus_13636#2 ------------------------------------------------------------ consensus_13636#1 ------------------------------------------------------------ consensus_13636#0 TCTACAATGTGTTAAAAGTAAATCCAGTCCTTGCGGTCCTACTATCCTCATTCACTGGGT 1399 consensus_13636#2 ------------------------------------------------------------ consensus_13636#1 ------------------------------------------------------------ consensus_13636#0 TTGGGATTGCTATCAGTGCGAACTCAATGCTAGTGGAATACTTGAGGTGGAGATCTAGGA 1459 consensus_13636#2 ------------------------------------------------------------ consensus_13636#1 ------------------------------------------------------------ consensus_13636#0 GGAATCAACAGCTAGCTCAAACTGTCGATGATGGTCAGCGACAAGAACCTGGAAGTAATG 1519 consensus_13636#2 ------------------------------------------------------------ consensus_13636#1 ------------------------------------------------------------ consensus_13636#0 CTGTAAATGAAAACAATGGTGATAGACAGCAAGCGCAGCATCGAGAATCTGGAGATAACA 1579 consensus_13636#2 ------------------------------------------------------------ consensus_13636#1 ------------------------------------------------------------ consensus_13636#0 TTGTATGACAATTCAGATTAAGAAGCGCAATGAATGTGAATAGCTAGCTTTGATATGTTC 1639 consensus_13636#2 ------------------------------------------------------------ consensus_13636#1 ------------------------------------------------------------ consensus_13636#0 AGTAGGTTTAGCTCGTCGAACTTCAGAATCACCTATGCAAGAATAGGAAACATGGAGCAA 1699 consensus_13636#2 ------------------------------------------------------------ consensus_13636#1 ------------------------------------------------------------ consensus_13636#0 ATTTCCAATGGCGACAGCATAAGATGATAAGAGGCTATGTGACAAGTGAGAACATGGAGA 1759 consensus_13636#2 ------------------------------------------------------------ consensus_13636#1 ------------------------------------------------------------ consensus_13636#0 ATGCGGCGGATATAGTTAGGCAACACAGAGAGCTGAACCAAACTATCCATTGTACACGGT 1819 consensus_13636#2 ------------------------------------------------------------ consensus_13636#1 ------------------------------------------------------------ consensus_13636#0 ATTAATTTAGCAGTTTGACATCATAAGGTGTGGTTTGTTCAGTGTAAGTTTAGTAGTTCT 1879 consensus_13636#2 ------------------------------------------------------------ consensus_13636#1 ------------------------------------------------------------ consensus_13636#0 GGTCGTCTGGTATTACAAAATTACATCACGAAAGTGAGTGCAGCTAGTGGCTAGCCATAC 1939 consensus_13636#2 ------------------------------------------------------------ consensus_13636#1 ------------------------------------------------------------ consensus_13636#0 AGATATATATACAGGTATAGGTATGTGAAATACAGTTATACCAGCTTTTACAGTTCTGTA 1999 consensus_13636#2 ------------------------------------------------------------ consensus_13636#1 ------------------------------------------------------------ consensus_13636#0 GTCTGTGTGAGGAGAAATGTGAAGGCAGAGAATTTTAGATAATGACATATTTCAGAGTTC 2059 consensus_13636#2 ------------------------------------------------------------ consensus_13636#1 ------------------------------------------------------------ consensus_13636#0 TGAACTTAGAAATTATTCGGGTAAAAAAATAGAGAAGAACTGTATGCAGTGCGTGGGGAT 2119 consensus_13636#2 ------------------------------------------------------------ consensus_13636#1 ------------------------------------------------------------ consensus_13636#0 TGAATTGAAATGAAATATGGAAATGATGTTCGCTTCAAAAAAAAAA 2165 consensus_13636#2 ---------------------------------------------- consensus_13636#1 ---------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||