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Oryza sativa
cluster # 13642 cluster # 13642       Sequences # 13       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13642#0 length = 847 sequences # 7  
consensus_13642#1 length = 746 sequences # 3  
consensus_13642#2 length = 661 sequences # 3  

consensusID : consensus_13642#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 847
fasta sequence
                              [CTCGGCTCCTCCGCCTGAATCCTTCTCCCTCGCCGGGTTAGGGTTTCCTCGCCTCGCCATGGCCTCCTTCACCTCCCAGCTCGGCGCCATGGCGTGCGGCGCCGCCCCCTCCACCTCGCCCCTCGCGGCCCGGAGGAGCGGGCAGCTGTTCGTGGGGCGGAAGCCCGCGGCGGCGTCGGTGCAGATGCGGGTGCCGCGGGCGGGGCGGGCGCGGGGGGTGGCGATGCGGGTGGCGTGCGAGAAGGTGGTGGGGATCGACCTCGGGACGACCAAC-TCCGCGGTGGCGGCGATGGAGGGCGGGAAGCCGACGGTCATCACCAACGCCGAGGGCCAGCGGACGACGCCCTCCGTGGTGGCGTACACCAAGGGCGGGGAGCGG-CTGGTCGGGCAGATCGCCAAGCGGCAGGCCGTCGTCAACCCGGAGAACACCTTCTTCTCCGTCAAGCGCTTCATCGGCCGCAAGATGGCCGAGGTCGACGACGAGGCCAAGCAGGTCTCCTACCACGTCGTCCGCGACGACAACGGCAACGTCAAGCTCGACTGCCCCGCCATCGGCAAGCAGTTCGCCGCCGAGGAGATTTCCGCGCAGGTCTTGAGGAAGTTGGTGGACGATGCATCTAAGTTTTTGAATGACAAAATTACCAAAGCAGTGGTTACTGTTCCTGCATACTTCAATGACTCACAGAGGACAGCAACAAAAGATGCTGGACGTATTGCAGGATTGGAAGTTCTCCGCATTATAAATGAGCCGACTGCTGCATCCCTTGCTTATGGTTTTGAGAAGAAAAACAACGAAACGATTCTTGTGTTTGACTTGGGAGGCGGTACCTTTGATGTCTCTGTATTG]

[+] EMBL AU069990             [CTCGGCTCCTCCGCCTGAATCCTTCTCCCTCGCCGGGTTAGGGTTTCCTCGCCTCGCCATGGCCTCCTTCACCTCCCAGCTCGGCGCCATGGCGTGCGGCGCCGCCCCCTCCACCTCGNCCCTCGCGGCCCGGAGGAGCGGGCAGCTGTTCGTGGGGCGGAAG  CGCGGCGGCGTCGGTGCAGATGCGGGTGCCGCGGGCGGGGCGGGCGCGGGGGGTGGCGATGCGGGTGGCGTGCGAGAAGGTGGTGGGGATCGACCTCGGGACGACCAACTTCCGCGGTGGCGGCGATGGAGGGCGGGAAGCCGACGGTCATCANCAACGGCGAGGGCCAGCGGACGACGGCCTTCGTGGTTGCGTANA CAAGGGCGGGGAGCGGTTTGTTCGGGAAGATCGCAAAGCGGAAGGCC TTGTAAACCC GAGANAACTTTTTTTTCntaa                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CB642281             [  CGGCTCCTCCGCCTGAATCCTTCTCCCTCGCCGGGTTAGGGTTTCCTCGCCTCGCCATGGCCTCCTTCACCTCCCAGCTCGGCGCCATGGCGTGCGGCGCCGCCCCCTCCACCTCGCCCCTCGCGGCCCGGAGGAGCGGGCAGCTGTTCGTGGGGCGGAAGCCCGCGGCGGCGTCGGTGCAGATGCGGGTGCCGCGGGCGGGGCGGGCGCGGGGGGTGGCGATGCGGGTGGCGTGCGAGAAGGTGGTGGGGATCGACCTCGGGACGACCAAC TCCGCGGTGGCGGCGATGGAGGGCGGGAAGCCGACGGTCATCACCAACGCCGAGGGCCAGCGGACGACGCCCTCCGTGGTGGCGTACACCAAGGGCGGGGAGCGG CTGGTCGGGCAGATCGCCAAGCGGCAGGCCGTCGTCAACCCGGAGAACACCTTCTTCTCCGTCAAGCGCTTCATCGGCCGCAAGATGGCCGAGGTCGACGACGAGGCCAAGCAGGTCTCCTACCACGTCGTCCGCGACGACAACGGCAACGTCAAGCTCGACTGCCCCGCCATCGGCAAGCAGTTCGCCGCCGAGGAGATTTCCGCGCAGGTCTTGAGGAAGTTGGTGGACGATGCATCTAAGTTTTTGAATGACAAAATTACCAAAGCAGTGGTTACTGTTCCTGCATACTTCAATGACTCACAGAGGACAGCAACAAAAGATGCTGGACGTATTGCAGGATTGGAAGTTCTCCGCATTATAAATGAGCCGACTGCTGCATC                                                                                     ]
[+] EMBL CB632695             [                                 CGGGTTCCGGTTTCCTCGCCTCGCCATGGCCTCCTTCACCTCCCAGCTCGGCGCCATGGCGTGCGGCGCCGCCCCCTCCACCTCGCCCCTCGCGGCCCGGAGGAGCGGGCAGCTGTTCGTGGGGCGGAAGCCCGCGGCGGCGTCGGTGCAGATGCGGGTGCCGCGGGCGGGGCGGGCGCGGGGGGTGGCGATGCGGGTGGCGTGCGAGAAGGTGGTGGGGATCGACCTCGGGACGACCAAC TCCGCGGTGGCGGCGATGGAGGGCGGGAAGCCGACGGTCATCACCAACGCCGAGGGCCAGCGGACGACGCCCTCCGTGGTGGCGTACACCAAGGGCGGGGAGCGG CTGGTCGGGCAGATCGCCAAGCGGCAGGCCGTCGTCAACCCGGAGAACACCTTCTTCTCCGTCAAGCGCTTCATCGGCCGCAAGATGGCCGAGGTCGACGACGAGGCCAAGCAGGTCTCCTACCACGTCGTCCGCGACGACAACGGCAACGTCAAGCTCGACTGCCCCGCCATCGGCAAGCAGTTCGCCGCCGAGGAGATTTCCGCGCAGGTCTTGAGGAAGTTGGTGGACGATGCATCTAAGTTTTTGAATGACAAAATTACCAAAGCAGTGGTTACTGTTCCTGCATACTTCAATGACTCACAGAGGACAGCAACAAAAGATGCTGGACGTATTGCAGGATTGGAAGTTCTCCGCATTATAAATGAGCCGACTGCTGCATCCCTTGCTTATGGTTTTGAGAAGATAAACAACGAAACGATTCTTGTGTTTGACTTGGGAGGCGGTACCTTTGATG           ]
[+] EMBL CB641289             [                                                                                                                                                                                                                                    GGTGGCGTGCGAGAAGGTGGTGGGGATCGACCTCGGGACGACCAAC TCCGCGGTGGCGGCGATGGAGGGCGGGAAGCCGACGGTCATCACCAACGCCGAGGGCCAGCGGACGACGCCCTCCGTGGTGGCGTACACCAAGGGCGGGGAGCGG CTGGTCGGGCAGATCGCCAAGCGGCAGGCCGTCGTCAACCCGGAGAACACCTTCTTCTCCGTCAAGCGCTTCATCGGCCGCAAGATGGCCGAGGTCGACGACGAGGCCAAGCAGGTCTCCTACCACGTCGTCCGCGACGACAACGGCAACGTCAAGCTCGACTGCCCCGCCATCGGCAAGCAGTTCGCCGCCGAGGAGATTTCCGCGCAGGTCTTGAGGAAGTTGGTGGACGATGCATCTAAGTTTTTGAATGACAAAATTACCAAAGCAGTGGTTACTGTTCCTGCATACTTCAATGACTCACAGAGGACAGCAACAAAAGATGCTGGACGTATTGCAGGATTGGAAGTTCTCCGCATTATAAATGAGCCGACTGCTGCATCCCTTGCTT                                                                             ]
[+] EMBL CB618328             [                                                                                                                                                                                                                                                     TGGTGGGGATCGACCTCGGGACGACCAAC TCCGCGGTGGCGGCGATGGAGGGCGGGAAGCCGACGGTCATCACCAACGCCGAGGGCCAGCGGACGACGCCCTCCGTGGTGGCGTACACCAAGGGCGGGGAGCGG CTGGTCGGGCAGATCGCCAAGCGGCAGGCCGTCGTCAACCCGGAGAACACCTTCTTCTCCGTCAAGCGCTTCATCGGCCGCAAGATGGCCGAGGTCGACGACGAGGCCAAGCAGGTCTCCTACCACGTCGTCCGCGACGACAACGGCAACGTCAAGCTCGACTGCCCCGCCATCGGCAAGCAGTTCGCCGCCGAGGAGATTTCCGCGCAGGTCTTGAGGAAGTTGGTGGACGATGCATCTAAGTTTTTGAATGACAAAATTACCAAAGCAGTGGTTACTGTTCCTGCATACTTCAATGACTCACAGAGGACAGCAACAAAAGATGCTGGACGTATTGCAGGATTGGAAGTTCTCCGCATTATAAATGAGCCGACTGCTGCATCCCTTGCTTATGGTTTTGAGAAGAAAAACAACGAAACGATTCTTGTGTTTGACTTGGGAGGCGGTACCTTTGATGTCTCTGTATTG]
[+] EMBL CB619016             [                                                                                                                                                                                                                                                                                      GCGGTGGCGGCGATGGAGGGCGGGAAGCCGACGGTCATCACCAACGCCGAGGGCCAGCGGACGACGCCCTCCGTGGTGGCGTACACCAAGGGCGGGGAGCGG CTGGTCGGGCAGATCGCCAAGCGGCAGGCCGTCGTCAACCCGGAGAACACCTTCTTCTCCGTCAAGCGCTTCATCGGCCGCAAGATGGCCGAGGTCGACGACGAGGCCAAGCAGGTCTCCTACCACGTCGTCCGCGACGACAACGGCAACGTCAAGCTCGACTGCCCCGCCATCGGCAAGCAGTTCGCCGCCGAGGAGATTTCCGCGCAGGTCTTGAGGAAGTTGGTGGACGATGCATCTAAGTTTTTGAATGACAAAATTACCAAAGCAGTGGTTACTGTTCCTGCATACTTCAATGACTCACAGAGGACAGCAACAAAAGATGCTGGACGTATTGCAGGATTGGAAGTTCTCCGCATTATAAATGAGCCGACTGCTGCATCCCTTGCTTATGGTTTTGAGAAGAAAAACAACGAAACGATTCTTGTGTTTGACTTGGGAGGCGGTACCTTTGATGTCTCTGTATTG]
[+] EMBL CF325781             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CGAGGCCAAGCAGGTCTCCTACCACGTCGTCCGCGACGACAACGGCAACGTCAAGCTCGACTGCCCCGCCATCGGCAAGCAGTTCGCCGCCGAGGAGATTTCCGCGCAGGTCTTGAGGAAGTTGGTGGACGATGCATCTAAGTTTTTGAATGACAAAATTACCAAAGCAGTGGTTACTGTTCCTGCATACTTCAATGACTCACAGAGGACAGCAACAAAAGATGCTGGACGTATTGCAGGATTGGAAGTTCTCCGCATTATAAATGAGCCGACTGCTGCATCCCTTGCTTATGGTTTTGAGAAGAAAAACAACGAAACGATTCTTGTGTTTGACTTGGGAGGCGGTACCTTTGATGTCTCTGTATTG]


>consensus_13642#0 CTCGGCTCCTCCGCCTGAATCCTTCTCCCTCGCCGGGTTAGGGTTTCCTCGCCTCGCCAT GGCCTCCTTCACCTCCCAGCTCGGCGCCATGGCGTGCGGCGCCGCCCCCTCCACCTCGCC CCTCGCGGCCCGGAGGAGCGGGCAGCTGTTCGTGGGGCGGAAGCCCGCGGCGGCGTCGGT GCAGATGCGGGTGCCGCGGGCGGGGCGGGCGCGGGGGGTGGCGATGCGGGTGGCGTGCGA GAAGGTGGTGGGGATCGACCTCGGGACGACCAACTCCGCGGTGGCGGCGATGGAGGGCGG GAAGCCGACGGTCATCACCAACGCCGAGGGCCAGCGGACGACGCCCTCCGTGGTGGCGTA CACCAAGGGCGGGGAGCGGCTGGTCGGGCAGATCGCCAAGCGGCAGGCCGTCGTCAACCC GGAGAACACCTTCTTCTCCGTCAAGCGCTTCATCGGCCGCAAGATGGCCGAGGTCGACGA CGAGGCCAAGCAGGTCTCCTACCACGTCGTCCGCGACGACAACGGCAACGTCAAGCTCGA CTGCCCCGCCATCGGCAAGCAGTTCGCCGCCGAGGAGATTTCCGCGCAGGTCTTGAGGAA GTTGGTGGACGATGCATCTAAGTTTTTGAATGACAAAATTACCAAAGCAGTGGTTACTGT TCCTGCATACTTCAATGACTCACAGAGGACAGCAACAAAAGATGCTGGACGTATTGCAGG ATTGGAAGTTCTCCGCATTATAAATGAGCCGACTGCTGCATCCCTTGCTTATGGTTTTGA GAAGAAAAACAACGAAACGATTCTTGTGTTTGACTTGGGAGGCGGTACCTTTGATGTCTC TGTATTG



consensusID : consensus_13642#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 746
fasta sequence
                              [GCCTGCTTTAAAAGGCCTCGCCGGGTTAGGGTTTCCTCGCCTCGCCATGGCCTCCTTCACCTCCCAGCTCGGCGCCATGGCGTGCGGCGCCGCCCCCTCCACCTCGCCCCTCGCGGCCCGGAGGAGCGGGCAGCTGTTCGTGGGGCGGAAGCCCGCGGCGGCGTCGGTGCAGATGCGGGTGCCGCGGGCGGGGCGGGCGCGGGGGGTGGCGATGCGGGTGGCGTGCGAGAAGGTGGTGGGGATCGACCTCGGGACGACCAACTCCGCGGTGGCGGCGATGGAGGGCGGGAAGCCGACGGTCATCACCAACGCCGAGGGCCAGCGGACGACGCCCTCCGTGGTGGCGTACACCAAGGGC-GGGGAGC-GGCTGGTC-GGGCAGATCGCCAAGC-GGCAGGCCGTCGTCAACCCGGAGAACACCTTCTTCTCCGTCAAGCGCTTCATC-GGCCGCAAGATGGCCGAGGTCGACGACGAGGCCAAGCAGGTCTCCTACCACGTCGTCCGCGACGACAACGGCAACGTCAAGCTCGACTGCCCCGCCATCGGCAAGCAGTTCGCCGCCGAGGAGATTTCCGCGCAGGTCTTGAGGAAGTTGGTGGACGATGCATCTAAGTTTTTGAATGACAAAATTACCAAAGCAGTGGTTACTGTTCCTGCATACTTCAATGACTCACAGAGGACAGCAACAAAAGATGCTGGACGTATTGCAGGATTGGAAGTTCTCCGCATTATAAATGAGGCGACTGCTG]

[+] EMBL CB618558             [GCCTGCTTTAAAAGGCCTCGCCGGGTTAGGGTTTCCTCGCCTCGCCATGGCCTCCTTCACCTCCCAGCTCGGCGCCATGGCGTGCGGCGCCGCCCCCTCCACCTCGCCCCTCGCGGCCCGGAGGAGCGGGCAGCTGTTCGTGGGGCGGAAGCCCGCGGCGGCGTCGGTGCAGATGCGGGTGCCGCGGGCGGGGCGGGCGCGGGGGGTGGCGATGCGGGTGGCGTGCGAGAAGGTGGTGGGGATCGACCTCGGGACGACCAACTCCGCGGTGGCGGCGATGGAGGGCGGGAAGCCGACGGTCATCACCAACGCCGAGGGCCAGCGGACGACGCCCTCCGTGGTGGCGTACACCAAGGGC GGGGAGC GGCTGGTC GGGCAGATCGCCAAGC GGCAGGCCGTCGTCAACCCGGAGAACACCTTCTTCTCCGTCAAGCGCTTCATC GGCCGCAAGATGGCCGAGGTCGACGACGAGGCCAAGCAGGTCTCCTACCACGTCGTCCGCGACGACAACGGCAACGTCAAGCTCGACTGCCCCGCCATCGGCAAGCAGTTCGCCGCCGAGGAGATTTCCGCGCAGGTCTTGAGGAAGTTGGTGGACGATGCATCTAAGTTTTTGAATGACAAAATTACCAAAGCAGTGGTTACTGTTCCTGCATACTTCAATGACTCACAGAGGACAGCAACAAAAGATGCTGGACGTATTGCAGGATTGGAAGTTCTCCGCATTATAAATGAGGCGACTGCTG]
[+] EMBL CB636742             [                                                                                                                                                                                                                              GTGCGAGAAGGTGGTGGGGATCGACCTCGGGACGACCAACTCCGCGGTGGCGGCGATGGAGGGCGGGAAGCCGACGGTCATCACCAACGCCGAGGGCCAGCGGACGACGCCCTCCGTGGTGGCGTACACCAAGGGC GGGGAGC GGCTGGTC GGGCAGATCGCCAAGC GGCAGGCCGTCGTCAACCCGGAGAACACCTTCTTCTCCGTCAAGCGCTTCATC GGCCGCAAGATGGCCGAGGTCGACGACGAGGCCAAGCAGGTCTCCTACCACGTCGTCCGCGACGACAACGGCAACGTCAAGCTCGACTGCCCCGCCATCGGCAAGCAGTTCGCCGCCGAGGAGATTTCCGCGCAGGTCTTGAGGAAGTTGGTGGACGATGCATCTAATTTTTTGAATGACA                                                                                                                           ]
[+] EMBL AU175026             [                                                                                                                                                                                                                                                                                                              TCACCAACGCCGAGGGCCAGCGGACGACGCCCTCCGTGGTGGCGTACACCAAGGGCGGGGGAGCGGGNTGGTCGGGGCAGATCGCCAAGCGGGCAGGCCGTCGTCAACCCGGAGAACACCTTCTTCTCCGTCAAGCGCTTCATCGGGCCGCAAGATGGCCGAGGTCGACGACGAGGCCAAGCAGGTCTCCTACCACGTCGTCCGCGACGACAACGGCAACGTCAAGCTCGACTGCCCCGCCATCGGCAAGCAGTTCGCCGCCGAGGAGATTTCCGCGCAGGTCTTGAGGAAGTTGGTGGACGATGCATCTAAGTTTTTGAATGACAAAATTACCAAAGCAGTGGTTACTGTTCCTGCATACTTCAATGACTCACAGAGGACAGCAACAAAAGATGCTGGA                                                 ]


>consensus_13642#1 GCCTGCTTTAAAAGGCCTCGCCGGGTTAGGGTTTCCTCGCCTCGCCATGGCCTCCTTCAC CTCCCAGCTCGGCGCCATGGCGTGCGGCGCCGCCCCCTCCACCTCGCCCCTCGCGGCCCG GAGGAGCGGGCAGCTGTTCGTGGGGCGGAAGCCCGCGGCGGCGTCGGTGCAGATGCGGGT GCCGCGGGCGGGGCGGGCGCGGGGGGTGGCGATGCGGGTGGCGTGCGAGAAGGTGGTGGG GATCGACCTCGGGACGACCAACTCCGCGGTGGCGGCGATGGAGGGCGGGAAGCCGACGGT CATCACCAACGCCGAGGGCCAGCGGACGACGCCCTCCGTGGTGGCGTACACCAAGGGCGG GGAGCGGCTGGTCGGGCAGATCGCCAAGCGGCAGGCCGTCGTCAACCCGGAGAACACCTT CTTCTCCGTCAAGCGCTTCATCGGCCGCAAGATGGCCGAGGTCGACGACGAGGCCAAGCA GGTCTCCTACCACGTCGTCCGCGACGACAACGGCAACGTCAAGCTCGACTGCCCCGCCAT CGGCAAGCAGTTCGCCGCCGAGGAGATTTCCGCGCAGGTCTTGAGGAAGTTGGTGGACGA TGCATCTAAGTTTTTGAATGACAAAATTACCAAAGCAGTGGTTACTGTTCCTGCATACTT CAATGACTCACAGAGGACAGCAACAAAAGATGCTGGACGTATTGCAGGATTGGAAGTTCT CCGCATTATAAATGAGGCGACTGCTG



consensusID : consensus_13642#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 661
fasta sequence
                              [CGGGGTACGGGCGCGGCGGGGGCCGGAGGTGGCGGCCGCTGCGGGAGGCGTGCGAGAAGGTGGTCGGGATCGACCTCGGGACCACCAACTCCGCGGTGGCGGCCATGGAGGGCGGCAAGCCGACGATCGTCACCAACGCCGAGGGCGCCCGCACCACGCCGTCGGTCGTCGCCTACACCAAGTCCGGTGACCGGCTGGTGGGGCAGATCGCCAAGCGACAGGCGGTCGTCAACCCGGAGAACACCTTCTTCTCCGTCAAGCGCTTCATCGGCCGCAAGATGAACGAAGTCGACGAGGAGTCCAAGCAGGTCTCCTACCGCGTCATCAGGGACGACAACGGCAACGTCAAGCTCGACTGTCCCGCCATTGGCAAGCAGTTCGCCGCCGAGGAGATCTCCGCCCAGGTGCTTAGAAAGCTGGTGGATGATGCATCAAAGTTCTTGAACGATAAAGTCACAAAGGCAGTGATCACAGTCCCAGCATATTTCAATGACTCACAAAGGACAGCAACAAAAGATGCTGGCCGGATTGCTGGGTTGGAAGTTCTCCGCATCATAAACGAGCCTACTGCAGCATCTTTGGCATATGGGTTTGAAAAGAAGAACAATGAGACCATTCTTGTTTTTGACCTGGGAGGAGGCACATTTGATGTTTCAGTTCT]

[+] EMBL CB633650             [CGGGGTACGGGCGCGGCGGGGGCCGGAGGTGGCGGCCGCTGCGGGAGGCGTCCCATAAGGTGGTCGGGATCGACCTCTGGACCACCAACTCCGCGGTGGCGGCCATGGAGGGCGGCAAGCCGACGATCGTCACCAACGCCGAGGGCGCCCGCACCACGCCGTCGGTCGTCGCCTACACCAAGTCCGGTGACCGGCTGGTGGGGCAGATCGCCAAGCGACAGGCGGCCGTCAAACCGGAGAACACCTTCTTCTCCGT                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CB672065             [                                CGGCCCCTTTGGGTGGCGTGCGAGAAGGTGGTCGGGATCGACCTCGGGACCACCAACTCCGCGGTGGCGGCCATGGAGGGCGGCAAGCCGACGATCGTCACCAACGCCGAGGGCGCCCGCACCACGCCGTCGGTCGTCGCCTACACCAAGTCCGGTGACCGGCTGGTGGGGCAGATCGCCAAGCGACAGGCGGTCGTCAACCCGGAGAACACCTTCTTCTCCGTCAAGCGCTTCATCGGCCGCAAGATGAACGAAGTCGACGAGGAGTCCAAGCAGGTCTCCTACCGCGTCATCAGGGACGACAACGGCAACGTCAAGCTCGACTGTCCCGCCATTGGCAAGCAGTTCGCCGCCGAGGAGATCTCCGCCCAGGTGCTTAGAAAGCTGGTGGATGATGCATCAAAGTTCTTGAACGATAAAGTCACAAAGGCAGTGATCACAGTCCCAGCATATTTCAATGACTCACAAAGGACAGCAACAAAAGATGCTGGCCGGATTGCTGGGTTGGAAGTTCTCCGCATCATAAACGAGCCTACTGCAGCATCTTTGGCATATGGGTTTGAAAAGAAGAACAATGAGACCATTCTTGTTTTTGACCTGGGAGGAGGCACATTTGATGTTTCAGTTCT]
[+] EMBL AU070324             [                                                CGTGCGAGAAGGTGGTCGGGATCGACCTCGGGACCACCAACTCCGCGGTGGCGGCCATGGAGGGCGGCAAGCCGACGATCGTCACCAACGCCGAGGGCGCCCGCACCACGCCGTCGGTCGTCGCCTACACCAAGTCCGGTGACCGGCTGGTGGGGCAGATCGCCAAGCGACAGGCGGTCGTCAACCCGGAGAACACCTTCTTCTCCGTCAAGCGCTTCATCGGCCGCAAGATGAACGAA TCGACGAGGAGTCCAAGCAGGTCTCCTACCGCGTCATCAGGGACGACAACGGCAACGTCAAGCTCGACTG                                                                                                                                                                                                                                                                                                               ]


>consensus_13642#2 CGGGGTACGGGCGCGGCGGGGGCCGGAGGTGGCGGCCGCTGCGGGAGGCGTGCGAGAAGG TGGTCGGGATCGACCTCGGGACCACCAACTCCGCGGTGGCGGCCATGGAGGGCGGCAAGC CGACGATCGTCACCAACGCCGAGGGCGCCCGCACCACGCCGTCGGTCGTCGCCTACACCA AGTCCGGTGACCGGCTGGTGGGGCAGATCGCCAAGCGACAGGCGGTCGTCAACCCGGAGA ACACCTTCTTCTCCGTCAAGCGCTTCATCGGCCGCAAGATGAACGAAGTCGACGAGGAGT CCAAGCAGGTCTCCTACCGCGTCATCAGGGACGACAACGGCAACGTCAAGCTCGACTGTC CCGCCATTGGCAAGCAGTTCGCCGCCGAGGAGATCTCCGCCCAGGTGCTTAGAAAGCTGG TGGATGATGCATCAAAGTTCTTGAACGATAAAGTCACAAAGGCAGTGATCACAGTCCCAG CATATTTCAATGACTCACAAAGGACAGCAACAAAAGATGCTGGCCGGATTGCTGGGTTGG AAGTTCTCCGCATCATAAACGAGCCTACTGCAGCATCTTTGGCATATGGGTTTGAAAAGA AGAACAATGAGACCATTCTTGTTTTTGACCTGGGAGGAGGCACATTTGATGTTTCAGTTC T



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13642#0      CTCGGCTCCTCCGCCTGAATCCTTCTCCCTCGCCGGGTTAGGGTTTCCTCGCCTCGCCAT 60
consensus_13642#1      ------------GCCTGCTTTAAAAGGCCTCGCCGGGTTAGGGTTTCCTCGCCTCGCCAT 48
consensus_13642#2      ------------------------------------------------------------
                                                                                   

consensus_13642#0      GGCCTCCTTCACCTCCCAGCTCGGCGCCATGGCGTGCGGCGCCGCCCCCTCCACCTCGCC 120
consensus_13642#1      GGCCTCCTTCACCTCCCAGCTCGGCGCCATGGCGTGCGGCGCCGCCCCCTCCACCTCGCC 108
consensus_13642#2      ------------------------------------------------------------
                                                                                   

consensus_13642#0      CCTCGCGGCCCGGAGGAGCGGGCAGCTGTTCGTGGGGCGGAAGCCCGCGGCGGCGTCGGT 180
consensus_13642#1      CCTCGCGGCCCGGAGGAGCGGGCAGCTGTTCGTGGGGCGGAAGCCCGCGGCGGCGTCGGT 168
consensus_13642#2      ------------------------------------------------------------
                                                                                   

consensus_13642#0      GCAGATGCGGGTGCCGCGGGCGGGGCGGGCGCGGGGGGTGGCGA----TGCGGGTGGCGT 236
consensus_13642#1      GCAGATGCGGGTGCCGCGGGCGGGGCGGGCGCGGGGGGTGGCGA----TGCGGGTGGCGT 224
consensus_13642#2      ---------CGGGGTACGGGCGCGGCGGGGGCCGGAGGTGGCGGCCGCTGCGGGAGGCGT 51
                                 * *   ****** ****** ** ** *******     ****** *****

consensus_13642#0      GCGAGAAGGTGGTGGGGATCGACCTCGGGACGACCAACTCCGCGGTGGCGGCGATGGAGG 296
consensus_13642#1      GCGAGAAGGTGGTGGGGATCGACCTCGGGACGACCAACTCCGCGGTGGCGGCGATGGAGG 284
consensus_13642#2      GCGAGAAGGTGGTCGGGATCGACCTCGGGACCACCAACTCCGCGGTGGCGGCCATGGAGG 111
                       ************* ***************** ******************** *******

consensus_13642#0      GCGGGAAGCCGACGGTCATCACCAACGCCGAGGGCCAGCGGACGACGCCCTCCGTGGTGG 356
consensus_13642#1      GCGGGAAGCCGACGGTCATCACCAACGCCGAGGGCCAGCGGACGACGCCCTCCGTGGTGG 344
consensus_13642#2      GCGGCAAGCCGACGATCGTCACCAACGCCGAGGGCGCCCGCACCACGCCGTCGGTCGTCG 171
                       **** ********* ** *****************   ** ** ***** ** ** ** *

consensus_13642#0      CGTACACCAAGGGCGGGGAGCGGCTGGTCGGGCAGATCGCCAAGCGGCAGGCCGTCGTCA 416
consensus_13642#1      CGTACACCAAGGGCGGGGAGCGGCTGGTCGGGCAGATCGCCAAGCGGCAGGCCGTCGTCA 404
consensus_13642#2      CCTACACCAAGTCCGGTGACCGGCTGGTGGGGCAGATCGCCAAGCGACAGGCGGTCGTCA 231
                       * *********  *** ** ******** ***************** ***** *******

consensus_13642#0      ACCCGGAGAACACCTTCTTCTCCGTCAAGCGCTTCATCGGCCGCAAGATGGCCGAGGTCG 476
consensus_13642#1      ACCCGGAGAACACCTTCTTCTCCGTCAAGCGCTTCATCGGCCGCAAGATGGCCGAGGTCG 464
consensus_13642#2      ACCCGGAGAACACCTTCTTCTCCGTCAAGCGCTTCATCGGCCGCAAGATGAACGAAGTCG 291
                       **************************************************  *** ****

consensus_13642#0      ACGACGAGGCCAAGCAGGTCTCCTACCACGTCGTCCGCGACGACAACGGCAACGTCAAGC 536
consensus_13642#1      ACGACGAGGCCAAGCAGGTCTCCTACCACGTCGTCCGCGACGACAACGGCAACGTCAAGC 524
consensus_13642#2      ACGAGGAGTCCAAGCAGGTCTCCTACCGCGTCATCAGGGACGACAACGGCAACGTCAAGC 351
                       **** *** ****************** **** ** * **********************

consensus_13642#0      TCGACTGCCCCGCCATCGGCAAGCAGTTCGCCGCCGAGGAGATTTCCGCGCAGGTCTTGA 596
consensus_13642#1      TCGACTGCCCCGCCATCGGCAAGCAGTTCGCCGCCGAGGAGATTTCCGCGCAGGTCTTGA 584
consensus_13642#2      TCGACTGTCCCGCCATTGGCAAGCAGTTCGCCGCCGAGGAGATCTCCGCCCAGGTGCTTA 411
                       ******* ******** ************************** ***** *****  * *

consensus_13642#0      GGAAGTTGGTGGACGATGCATCTAAGTTTTTGAATGACAAAATTACCAAAGCAGTGGTTA 656
consensus_13642#1      GGAAGTTGGTGGACGATGCATCTAAGTTTTTGAATGACAAAATTACCAAAGCAGTGGTTA 644
consensus_13642#2      GAAAGCTGGTGGATGATGCATCAAAGTTCTTGAACGATAAAGTCACAAAGGCAGTGATCA 471
                       * *** ******* ******** ***** ***** ** *** * ** ** ****** * *

consensus_13642#0      CTGTTCCTGCATACTTCAATGACTCACAGAGGACAGCAACAAAAGATGCTGGACGTATTG 716
consensus_13642#1      CTGTTCCTGCATACTTCAATGACTCACAGAGGACAGCAACAAAAGATGCTGGACGTATTG 704
consensus_13642#2      CAGTCCCAGCATATTTCAATGACTCACAAAGGACAGCAACAAAAGATGCTGGCCGGATTG 531
                       * ** ** ***** ************** *********************** ** ****

consensus_13642#0      CAGGATTGGAAGTTCTCCGCATTATAAATGAGCCGACTGCTGCATCCCTTGCTTATGGTT 776
consensus_13642#1      CAGGATTGGAAGTTCTCCGCATTATAAATGAGGCGACTGCTG------------------ 746
consensus_13642#2      CTGGGTTGGAAGTTCTCCGCATCATAAACGAGCCTACTGCAGCATCTTTGGCATATGGGT 591
                       * ** ***************** ***** *** * ***** *                  

consensus_13642#0      TTGAGAAGAAAAACAACGAAACGATTCTTGTGTTTGACTTGGGAGGCGGTACCTTTGATG 836
consensus_13642#1      ------------------------------------------------------------
consensus_13642#2      TTGAAAAGAAGAACAATGAGACCATTCTTGTTTTTGACCTGGGAGGAGGCACATTTGATG 651
                                                                                   

consensus_13642#0      TCTCTGTATTG 847
consensus_13642#1      -----------
consensus_13642#2      TTTCAGTTCT- 661
                                  




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)