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Oryza sativa
cluster # 13692 cluster # 13692       Sequences # 13       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13692#0 length = 1548 sequences # 10  
consensus_13692#1 length = 1336 sequences # 3  

consensusID : consensus_13692#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1548
fasta sequence
                              [CCCCCGATCCCCTTCTCTCTCCCGCGGCCGGCGGCGCGAGCTTCGGCGGCGGCGGA-NGGCGTCTCTNCTGCTGGAGCTGCTCTNAGCTGCTTGCTTGCTTGCACATTGCTGGTTGTCGCCGATGAAGCTGCTTCAGCGCGTCAACCCCACGGCAGCGGCGTCGCTCACGGCGCTCGCCGT-CGTCGTGCTGCTCAC-GGCGTCGGCAAGCCGCCCTTCGTTCCTCCGGAGGTTCGAGCCCAGCATCGCGT-CGCTGCCGAGGGCCGCCCGGCGCGCCGCGC-CGGCGG-A-C-T-GCGACATCTTCCGCGGCGAGTGGGTGCCCGCCACCGNCGCCGACGACGG-GCGGCGCCGTACTACACGAACGCCACCTGCGGGGAGATCCAGGAGCACCAGAACTGCATGAAGTAC-GGCCGCCCCGACCTCGGCTTCCTCCGGTGGCGGTGGCGCCCGGAGCGCTGCG-AGC-TCCCGCGGTTCGACGCGGCGGCG-TTCCTGGACCT-CCTCAGGGGCAAGTCCATGGCGTTCGTCGGCGACTCGCTCTCCAGGAACCATATGCAGTCTCTCCTGTGCCTCCTCTCCAAGGTGGAGAATCCGAGAGAAGTCCCCAAGACGGCGGATCCAGAGTTCAGGGCGGTGCGGTACGAGTCCCACAACTTCACCGTCGCCGTCTTCCGGTCGCCGTACCTCGTGACGGCGAACCAGTCGGACCCCGCCGGCGGGATGTGGGACCTCTACCTCGACGAGCCGGACGCCGCCTGGGCGACCGCCGTGGCGGGCTTCGACTACGTCGTCGTCTCCACGGGGATCTGGTTCAACCGCCCGACCATGTTCTACGAGCGCGGCCGCCTCGTCGGCTGCTACAGCTGCCGCCTCCCGGGCGTCCCCGACCTCACCCTCCGCTACTCCCTGCCCCTGGCGTTCCGCACCGCGCTGCGCGCGCTCACCGCCGCAAGCGTGTTCAACGGCACGGTGATCGTGCGCACGCTGTCGCCGACGTCGCACTTCGAGGGCGGCGAGTGGGACAAGGGCGGCGACTGCCGGCGCACGCGGCCGACCGCGGCGAGCGAGGCGCGGATGTCCGGGCTGGACGTGGACTTCCACGCGGCGCAGGTGGAGGAGTTCAGGAGGGCGGAGGCGGCGGCGGCGGCGAGCGGGAGCGCGGTGAGGATGCTGCTGATGGACGCGACGGCGGCGATGGTGGCGCGGGCGGACGGGCACCCGAGCCGGTACGGGCACTGGGCGCACGAGAACGTGACGCTGTACAACGACTGCGTGCACTGGTGCCTCCCTGGACCCGTCGATGTGTGGAACGAGATGCTGCTCCAGATGCTGCTGCGTCATCAATCGTGAAGAGTTTTCTGGTTCATCTTTGTAATTTTTCTCTCTCAAAATTTTCATATAGAAATAAGTTTATTTAACCCCTCAAATTCTATATATGGTGTTTAACTATGACATAGAAGTACCCTCCAATATTCACAGACAAGTGCCCTGCCGGTGCACTAGGAATTTAGTACTTGTACTTGCTTTTTTCTATCCGTGAGTTTTGAGTGGGAGCAA]

[+] EMBL C27781               [CCCCCGATCCCCTTCTCTCTCCCGCGGCCGGCGGCGCGAGCTTCGGCGGCGGCGGA NGGCGTCTCTNCTGCTGGAGCTGCTCTNAGCTGCTTGCTTGCTTGCACATTGCTGGTTGTCGCCGATGAAGCTGCTTCA NGCGTCAACCCCACGGCAGCGGCGTCGCTCACGGCGCTCGCNTC CGTCGTGCTGCTCAC GGCGTCGGCAAGCCGCCCTTCGTTCCTCCGGAGGTTCGAGCCCAGCATCGCGT CGCTGCCGAGGGCCGCCCGGAGCGCCGCNC TG  GT A CTT GCAACATCTTCCGCGGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AK106309             [       TCCCCTTCTCTCTCCCGCGGCCGGCGGCGCGAGCGTCGGCGGCGGCGGAGCGGCGTCTCTGCTGCTGGAGCTGCTCTGAGCTGCTTGCTTGCTTGCACATTGCTGGTTGTCGCCGATGAAGCTGCTTCAGCGCGTCAACCCCACGGCAGCGGCGTCGCTCACGGCGCTCGCCGT CGTCGTGCTGCTCAC GGCGTCGGCAAGCCGCCCTTCGTTCCTCCGGAGGTTCGAGCCCAGCATCGCGT CGCTGCCGAGGGCCGCCCGGCGCGCCGCGC CGGCGG A C T GCGACATCTTCCGCGGCGAGTGGGTGCCCGCCACCGCCGCCGACGACGGCGCGGCGCCGTACTACACGAACGCCACCTGCGGGGAGATCCAGGAGCACCAGAACTGCATGAAGTAC GGCCGCCCCGACCTCGGCTTCCTCCGGTGGCGGTGGCGCCCGGAGCGCTGCG AGC TCCCGCGGTTCGACGCGGCGGCG TTCCTGGACCT CCTCAGGGGCAAGTCCATGGCGTTCGTCGGCGACTCGCTCTCCAGGAACCATATGCAGTCTCTCCTGTGCCTCCTCTCCAAGGTGGAGAATCCGAGAGAAGTCCCCAAGACGGCGGATCCAGAGTTCAGGGCGGTGCGGTACGAGTCCCACAACTTCACCGTCGCCGTCTTCCGGTCGCCGTACCTCGTGACGGCGAACCAGTCGGACCCCGCCGGCGGGATGTGGGACCTCTACCTCGACGAGCCGGACGCCGCCTGGGCGACCGCCGTGGCGGGCTTCGACTACGTCGTCGTCTCCACGGGGATCTGGTTCAACCGCCCGACCATGTTCTACGAGCGCGGCCGCCTCGTCGGCTGCTACAGCTGCCGCCTCCCGGGCGTCCCCGACCTCACCCTCCGCTACTCCCTGCCCCTGGCGTTCCGCACCGCGCTGCGCGCGCTCACCGCCGCAAGCGTGTTCAACGGCACGGTGATCGTGCGCACGCTGTCGCCGACGTCGCACTTCGAGGGCGGCGAGTGGGACAAGGGCGGCGACTGCCGGCGCACGCGGCCGACCGCGGCGAGCGAGGCGCGGATGTCCGGGCTGGACGTGGACTTCCACGCGGCGCAGGTGGAGGAGTTCAGGAGGGCGGAGGCGGCGGCGGCGGCGAGCGGGAGCGCGGTGAGGATGCTGCTGATGGACGCGACGGCGGCGATGGTGGCGCGGGCGGACGGGCACCCGAGCCGGTACGGGCACTGGGCGCACGAGAACGTGACGCTGTACAACGACTGCGTGCACTGGTGCCTCCCTGGACCCGTCGATGTGTGGAACGAGATGCTGCTCCAGATGCTGCTGCGTCATCAATCGTGAAGAGTTTTCTGGTTCATCTTTGTAATTTTTCTCTCTCAAAATTTTCATATAGAAATAAGTTTATTTAACCCCTCAAATTCTATATATGGTGTTTAACTATGACATAGAAGTACCCTCCAATATTCACAGACAAGTGCCCTGCCGGTGCACTAGGAATTTAGTACTTGTACTTGCTTTTTTCTATCCGTGAGTTTTGAGTGGGAGCAA]
[+] EMBL AU089710             [                                                                                                                              AGCTGCTTCAGCGCGTCAACCCCACGGCAGCGGCGTCGCTCACGGCGCTCGCCGT CGTCGTGCTGCTCAC GGCGTCGGCAAGCCGCCCTTCGTTCCTCCGGAGGTTCGAGCCCAGCATCGCGT CGCTGCCGAGGGNCGCCCGGNGCGCCGCGC   GCGGAA C T GCGACATCTTCCGCGGCGAGTGGGTGCCCGCCACCGNCGCCGACGACGG GCGGCGCCGTACTACACGAACGNCACCTGCGGGGAGATCCAGGAGCACCAGAACTTCATGAAGTAC GGCCGCCCCGACCTNGGTTTCCTTCGGTGGCGGTGGCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AU089699             [                                                                                                                              AGCTGCTTNAGCGCGTCAACCCCACGGCAGCGGCGTCGCTCACGGCGCTCGCCGT CGTCGTGCTGCTCAC GGCGTCGGCAAGCCGCCCTTCGTTCCTCCGGAGGTTCGAGCCCAGCATCGCGT CGCTGCCGAGGGCCGCCCGGCGCGCCGCGC CGGCGG A C T GCGACATCTTCCGCGGCGAGTGGGTGCCCGCCACCGCCGCCGACGACGGCGCGGCGCCGTACTACACGAACGCCACCTGCGGGGAGATCCAGGAGCACCAGAACTGCATGAAGTAC GGCCGCCCCGACCTCGGCTTCCTCCGGTGGCGGTGGCGCCCGGAGCGCTGCG AGC TCCCGCGGTTCGACGCGGCGGCG TTCCTGGACCT CCTCAGGGGCAAGTCCATGGCGTTCGTCGGCGACTCGCTCTCCAGGAACCATATGCAGTCTCTCCTGTGCCTCCTCTCCAAGGTGGAGAATCCGAGAGAAGT CCCAAGACGGCGGATCCAGAGTTCAGGGCGGTGCGGTACGAGTCCCACAACTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AU029823             [                                                                                                                              AGCTGCTTCAGCGCGTCAACCCCACGGCAGCGGCGTCGCTCACGGCGCTCGCCGTANGTCGTGCTGCTCAC GGCGTCGGCAAGCCGCCCTTCGTTCCTCCGGAGGTTCGAGCCCAGCATCGCGTACGCTGCCGAGGGCCGCCCGGCGCGCCGCGCGCGG GA A C TNGCGACATCTTCCGCGGCGAGTGGGTGCCCGCCACCGNCGCCGACGACGG GCGGCGCCGTACTACACGAACGCCACCTGCGGGGAGATCCAGGAGCACCAGAACTGCATGAAGTAC GGNCGCCCCGACCTCGGCTTNCTCCGGTGGCGGTGGCGCCCGGAGCGNTGCGAAGCTTCCCGCGGTTCGACGGGGCGGCGTTTNCTGGACCTNCTTAAGGGGAAAGTCCATTGCGTTCGTCGGCGAATTGGTTTTCAGGAACCATATGAAGTTTTTCCTGTtg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AU089707             [                                                                                                                              AGCTGCTTCAGCGCGTCAACCCCACGGCAGCGGCGTCGCTCACGGCGCTCGCCGT CGTCGTGCTGCTCAC GGCGTCGGCAAGCCGCCCTTCGTTCCTCCGGAGGTTCGAGCCCAGCATCGCGT CGCTGCCGAGGGCCGCCCGGCGCGCCGCGN TCG GN A CTT GCGACATCTTCCGCGGCGAGTGGGTGCCCGCCACCGNCGCCGACGACGG GCGGCGCCGTACTACACGAACGNCACCTGCGGGGAGATCCAGGAGCACCAGAACTNCATGAAGTACGGGCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AU029811             [                                                                                                                               GCTGCTTCAGCGCGTCAACCCCACGGCAGCGGCGTCGCTCACGGCGCTCGCC T CGTCGTGCTGCTCAC GGCGTCGGCAAGCCGCCCTTCGTTCCTCCGGAGGTTCGAGCCCAGCATCGCGT CGCTGCCGAGGGCCGCCCGGCGCGCCGCG   NGCGGNANCTT GCGACATCTTCCGCGGCGAGTGGGTGCCCGCCACCGNCGCCGACGACGG GCGGCGCCGTACTACACGAACGCCACCTGCGGGGAGATCCAGGAGCACCAGAACTTCATGAAGTAC GGCCGNCCCGACCTCGGNTTCCTCCGGTGGCGGTGGCGCCCGGAGCGTTNCG AGC TCCCGCGGTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AU089709             [                                                                                                                               GCTGCTTCAGCGCGTCAACCCCACGGCAGCGGCGTCGCTCACGGCGCTCGCCGT CGTCGTGCTGCTCAC GGCGTCGGCAAGCCGCCCTTCGTTCCTCCGGAGGTTCGAGCCCAGCATCGCGT CGCTGCCGAGGGCCGCCCGGNGCGCCGCG  CGNCGGAA CTT GCGACATCTTCCGCGGCGAGTGGGTGCCCGCCACCGNCGCCGACGACGG GCGGCGCCGTACTACACGAACGCCACCTNCGGGGAGATCCAGGAGCACCAGAACTGCATGAAGTAC GGCCGNCCCGACCTCGGCTTCCTNCGGTGGCGGTNGCGCCCGGAGCGnt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AU089700             [                                                                                                                                                                    CTCACGGCGCTCGCCGT CGTCGTGCTGCTCACGGGCGTCGGCAAGCCGCCCTTCGTTCNTCCGAAGGTTCGAGCCCAGCATCGCGT CGCTGCCGAGGNCCGCCCGGCGCGCCGCGC CGGCGG A C T GCGACATCTTCCGCGGCGAGTGGGTGCCCGCCACCGCCGCCGACGACGGCGCGGCGCCGTACTACACGAACGCCACCTGCGGGGAGATCCAGGAGCACCAGAACTGCATGAAGTAC GGCCGCCCCGACCTCGGCTTCCTCCGGTGGCGGTGGCGCCCGGAGCGCTGCG AGC TCCCGCGGTTCGACGCGGCGGCG TTCCTGGACCT CCTCAGGGGCAAGTCCATGGCGTTCGTCGGCGACTCGCTCTCCAGGAACCATATGCAGTCTCTCCTGTGCCTCCTCTCCAAGGTGGAGAATCCGAGAGAAGTCCCCAAGACGGCGGATCCAGAGTTCAGGGCGGTGCGGTACGAGTCCCACAACTTCACCGTCGCCGTCTTCCGGTCGCCGTACCTCGTGACGGCGAACCAGTCGGACCCCGCCGGCGGGATGTGGGACCTCTACCTCGACGAGCCGGACGCCGCCTGGGCGACCGCCGTGGCGGGCTTCGACTACGTCGTCGTCTCCACGGGGATCTGGTTCAACCGCCCGACCATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AU089688             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CTCCAGGAACCATATGCAGTCTCTCCTGTGCCTCCTCTCCAAGGTGGAGAATCCGAGAGAAGTCCCCAAGACGGCGGATCCAGAGTTCAGGNCGGTNCGGTACGAGTCCCACAACTTCACCGTCGCCGTCTTCCGGTCGCCGTACCTCGTGACGGCGAACCAGTCGGACCCCGCCGGCGGGATGTGGGACCTCTACCTCGACGAGCCGGACGCCGCCTGGGCGACCGCCGTGGCGGGCTTCGACTACGTCGTCGTCTCCACGGGGATCTGGTTCAACCGCCCGACCATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]


>consensus_13692#0 CCCCCGATCCCCTTCTCTCTCCCGCGGCCGGCGGCGCGAGCTTCGGCGGCGGCGGANGGC GTCTCTNCTGCTGGAGCTGCTCTNAGCTGCTTGCTTGCTTGCACATTGCTGGTTGTCGCC GATGAAGCTGCTTCAGCGCGTCAACCCCACGGCAGCGGCGTCGCTCACGGCGCTCGCCGT CGTCGTGCTGCTCACGGCGTCGGCAAGCCGCCCTTCGTTCCTCCGGAGGTTCGAGCCCAG CATCGCGTCGCTGCCGAGGGCCGCCCGGCGCGCCGCGCCGGCGGACTGCGACATCTTCCG CGGCGAGTGGGTGCCCGCCACCGNCGCCGACGACGGGCGGCGCCGTACTACACGAACGCC ACCTGCGGGGAGATCCAGGAGCACCAGAACTGCATGAAGTACGGCCGCCCCGACCTCGGC TTCCTCCGGTGGCGGTGGCGCCCGGAGCGCTGCGAGCTCCCGCGGTTCGACGCGGCGGCG TTCCTGGACCTCCTCAGGGGCAAGTCCATGGCGTTCGTCGGCGACTCGCTCTCCAGGAAC CATATGCAGTCTCTCCTGTGCCTCCTCTCCAAGGTGGAGAATCCGAGAGAAGTCCCCAAG ACGGCGGATCCAGAGTTCAGGGCGGTGCGGTACGAGTCCCACAACTTCACCGTCGCCGTC TTCCGGTCGCCGTACCTCGTGACGGCGAACCAGTCGGACCCCGCCGGCGGGATGTGGGAC CTCTACCTCGACGAGCCGGACGCCGCCTGGGCGACCGCCGTGGCGGGCTTCGACTACGTC GTCGTCTCCACGGGGATCTGGTTCAACCGCCCGACCATGTTCTACGAGCGCGGCCGCCTC GTCGGCTGCTACAGCTGCCGCCTCCCGGGCGTCCCCGACCTCACCCTCCGCTACTCCCTG CCCCTGGCGTTCCGCACCGCGCTGCGCGCGCTCACCGCCGCAAGCGTGTTCAACGGCACG GTGATCGTGCGCACGCTGTCGCCGACGTCGCACTTCGAGGGCGGCGAGTGGGACAAGGGC GGCGACTGCCGGCGCACGCGGCCGACCGCGGCGAGCGAGGCGCGGATGTCCGGGCTGGAC GTGGACTTCCACGCGGCGCAGGTGGAGGAGTTCAGGAGGGCGGAGGCGGCGGCGGCGGCG AGCGGGAGCGCGGTGAGGATGCTGCTGATGGACGCGACGGCGGCGATGGTGGCGCGGGCG GACGGGCACCCGAGCCGGTACGGGCACTGGGCGCACGAGAACGTGACGCTGTACAACGAC TGCGTGCACTGGTGCCTCCCTGGACCCGTCGATGTGTGGAACGAGATGCTGCTCCAGATG CTGCTGCGTCATCAATCGTGAAGAGTTTTCTGGTTCATCTTTGTAATTTTTCTCTCTCAA AATTTTCATATAGAAATAAGTTTATTTAACCCCTCAAATTCTATATATGGTGTTTAACTA TGACATAGAAGTACCCTCCAATATTCACAGACAAGTGCCCTGCCGGTGCACTAGGAATTT AGTACTTGTACTTGCTTTTTTCTATCCGTGAGTTTTGAGTGGGAGCAA



consensusID : consensus_13692#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1336
fasta sequence
                              [CCCCTTCTCTCTCCCGCGGCCGGCGGCGCGAGCGTCGGCGGCGGCGGAGCGGCGTCTCTGCTGCTGGAGCTGCTCTGAGCTGCTTGCTTGCTTGCACATTGCTGGTTGTCGCCGATGAAGCTGCTTCAGCGCGTCAACCCCACGGCAGCGGCGTCGCTCACGGCGCTCGCCGTCGTCGTGCTGCTCACGGCGTCGGCAAGCCGCCCTTCGTTCCTCCGGAGGTTCGAGCCCAGCATCGCGTCGCTGCCGAGGGCCGCCCGGCGCGCCGCGCCGGCGGACTGCGACATCTTCCGCGGTGAGTGGGTGCCCGCCACCGCCGCCGACGACGGCGCGGCGCCGTACTACACGAACGCCACCTGCGGGGAGATCCAGGAGCACCAGAACTGCATGAAGTACGGCCGCCCCGACCTCGGCTTCCTCCGGTGGCGGTGGCGCCCGGAGCGCTGCGAGCTCCCGCGGTTCGACGCGGCGGCGTTCCTGGACCTCCTCAGGGGCAAGTCCATGGCGTTCGTCGGCGACTCGCTCTCCAGGAACCATATGCAGTCTCTCCTGTGCCTCCTCTCCAAGGTAACAACAAAAACATTTTCGCACATTTCAGGATAAATTCGCGTCGAAATGTCATTTGTTTTTTTTCTTCTTTTGAAGGTGGAGAATCCGAGAGAAGTCCCCAAGACGGCGGATCCAGAGTTCAGGGCGGTGCGGTACGAGTCCCACAACTTCACCGTCGCCGTCTTCCGGTCGCCGTACCTCGTGACGGCGAACCAGTCGGACCCCGCCGGCGGGATGTGGGACCTCTACCTCGACGAGCCGGACGCCGCCTGGGCGACCGCCGTGGCGGGC-TTCGACTACGTCGTCGTCTCCACGGGGATCTGGTTCAACCGCCCGACCATGTTCTACGAGCGCGGCCGCCTCGTCGGCTGCTACAGCTGCCGCCTCCCGGGCGTCCCCGACCTCACCCTCCGCTACTCCCTGCCCCTGGCGTTCCGCACCGCGCTGCGCGCGCTCACCGCCGCAAGCGTGTTCAACGGCACGGTGATCGTGCGCACGCTGTCGCCGACGTCGCACTTCGAGGGCGGCGAGTGGGACAAGGGCGGCGACTGCCGGCGCACGCGGCCGACCGCGGCGAGCGAGGCGCGGATGTCCGGGCTGGACGTGGACTTCCACGCGGCGCAGGTGGAGGAGTTCAGGAGGGCGGAGGCGGCGGCGGCGGCGAGCGGGAGCGCGGTGAGGATGCTGCTGATGGACGCGACGGCGGCGATGGTGGCGCGGGCGGACGGGCACCCGAGCCGGTACGGGCACTGGGCGCACGAGAACGTGACGCTGTACAACGACTGCG]

[-] EMBL AK108774             [CCCCTTCTCTCTCCCGCGGCCGGCGGCGCGAGCGTCGGCGGCGGCGGAGCGGCGTCTCTGCTGCTGGAGCTGCTCTGAGCTGCTTGCTTGCTTGCACATTGCTGGTTGTCGCCGATGAAGCTGCTTCAGCGCGTCAACCCCACGGCAGCGGCGTCGCTCACGGCGCTCGCCGTCGTCGTGCTGCTCACGGCGTCGGCAAGCCGCCCTTCGTTCCTCCGGAGGTTCGAGCCCAGCATCGCGTCGCTGCCGAGGGCCGCCCGGCGCGCCGCGCCGGCGGACTGCGACATCTTCCGCGGTGAGTGGGTGCCCGCCACCGCCGCCGACGACGGCGCGGCGCCGTACTACACGAACGCCACCTGCGGGGAGATCCAGGAGCACCAGAACTGCATGAAGTACGGCCGCCCCGACCTCGGCTTCCTCCGGTGGCGGTGGCGCCCGGAGCGCTGCGAGCTCCCGCGGTTCGACGCGGCGGCGTTCCTGGACCTCCTCAGGGGCAAGTCCATGGCGTTCGTCGGCGACTCGCTCTCCAGGAACCATATGCAGTCTCTCCTGTGCCTCCTCTCCAAGGTAACAACAAAAACATTTTCGCACATTTCAGGATAAATTCGCGTCGAAATGTCATTTGTTTTTTTTCTTCTTTTGAAGGTGGAGAATCCGAGAGAAGTCCCCAAGACGGCGGATCCAGAGTTCAGGGCGGTGCGGTACGAGTCCCACAACTTCACCGTCGCCGTCTTCCGGTCGCCGTACCTCGTGACGGCGAACCAGTCGGACCCCGCCGGCGGGATGTGGGACCTCTACCTCGACGAGCCGGACGCCGCCTGGGCGACCGCCGTGGCGGGC TTCGACTACGTCGTCGTCTCCACGGGGATCTGGTTCAACCGCCCGACCATGTTCTACGAGCGCGGCCGCCTCGTCGGCTGCTACAGCTGCCGCCTCCCGGGCGTCCCCGACCTCACCCTCCGCTACTCCCTGCCCCTGGCGTTCCGCACCGCGCTGCGCGCGCTCACCGCCGCAAGCGTGTTCAACGGCACGGTGATCGTGCGCACGCTGTCGCCGACGTCGCACTTCGAGGGCGGCGAGTGGGACAAGGGCGGCGACTGCCGGCGCACGCGGCCGACCGCGGCGAGCGAGGCGCGGATGTCCGGGCTGGACGTGGACTTCCACGCGGCGCAGGTGGAGGAGTTCAGGAGGGCGGAGGCGGCGGCGGCGGCGAGCGGGAGCGCGGTGAGGATGCTGCTGATGGACGCGACGGCGGCGATGGTGGCGCGGGCGGACGGGCACCCGAGCCGGTACGGGCACTGGGCGCACGAGAACGTGACGCTGTACAACGACTGCG]
[+] EMBL AU182960             [                                                                                                                       GCTGCTTCAGCGCGTCAACCCCACGGCAGCGGCGTCGCTCACGGCGCTCGCCGTCGTCGTGCTGCTCACGGCGTCGGCAAGCCGCCCTTCGTTCCTCCGGAGGTTCGAGCCCAGCATCGCGTCGCTGCCGAGGGCCGCCCGGCGCGCCGCGCCGGCGGACTGCGACATCTTCCGCGGCGAGTGGGTGCCCGCCACCGCCGCCGACGACGGCGCGGCGCCGTACTACACGAACGCCACCTGCGGGGAGATCCAGGAGCACCAGAACTGCATGAAGTACGGCCGNCCCGACCTCGGNTTCCTCCGGTGGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL C73536               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         AGAATCCGAGAGAAGTCCCCAAGACGGCGGATCCAGAGTTCAGGGCGGTGCGGTACGAGTCCCACAACTTCACCGTCGCCGTCTTCCGGTCGCCGTACCTCGTGACGGCGAACCAGTCGGACCCCGCCGGCGGGATGTGGGACCTCTACCTCGACGAGCCGGACGCCGCCTGGGCGACCGCCGTGGCGGGCNTTC NCTACGTCGTCGTCTCCACGGGGATCTGGTTCAACCGCCCGACCATGTTCTACG                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]


>consensus_13692#1 CCCCTTCTCTCTCCCGCGGCCGGCGGCGCGAGCGTCGGCGGCGGCGGAGCGGCGTCTCTG CTGCTGGAGCTGCTCTGAGCTGCTTGCTTGCTTGCACATTGCTGGTTGTCGCCGATGAAG CTGCTTCAGCGCGTCAACCCCACGGCAGCGGCGTCGCTCACGGCGCTCGCCGTCGTCGTG CTGCTCACGGCGTCGGCAAGCCGCCCTTCGTTCCTCCGGAGGTTCGAGCCCAGCATCGCG TCGCTGCCGAGGGCCGCCCGGCGCGCCGCGCCGGCGGACTGCGACATCTTCCGCGGTGAG TGGGTGCCCGCCACCGCCGCCGACGACGGCGCGGCGCCGTACTACACGAACGCCACCTGC GGGGAGATCCAGGAGCACCAGAACTGCATGAAGTACGGCCGCCCCGACCTCGGCTTCCTC CGGTGGCGGTGGCGCCCGGAGCGCTGCGAGCTCCCGCGGTTCGACGCGGCGGCGTTCCTG GACCTCCTCAGGGGCAAGTCCATGGCGTTCGTCGGCGACTCGCTCTCCAGGAACCATATG CAGTCTCTCCTGTGCCTCCTCTCCAAGGTAACAACAAAAACATTTTCGCACATTTCAGGA TAAATTCGCGTCGAAATGTCATTTGTTTTTTTTCTTCTTTTGAAGGTGGAGAATCCGAGA GAAGTCCCCAAGACGGCGGATCCAGAGTTCAGGGCGGTGCGGTACGAGTCCCACAACTTC ACCGTCGCCGTCTTCCGGTCGCCGTACCTCGTGACGGCGAACCAGTCGGACCCCGCCGGC GGGATGTGGGACCTCTACCTCGACGAGCCGGACGCCGCCTGGGCGACCGCCGTGGCGGGC TTCGACTACGTCGTCGTCTCCACGGGGATCTGGTTCAACCGCCCGACCATGTTCTACGAG CGCGGCCGCCTCGTCGGCTGCTACAGCTGCCGCCTCCCGGGCGTCCCCGACCTCACCCTC CGCTACTCCCTGCCCCTGGCGTTCCGCACCGCGCTGCGCGCGCTCACCGCCGCAAGCGTG TTCAACGGCACGGTGATCGTGCGCACGCTGTCGCCGACGTCGCACTTCGAGGGCGGCGAG TGGGACAAGGGCGGCGACTGCCGGCGCACGCGGCCGACCGCGGCGAGCGAGGCGCGGATG TCCGGGCTGGACGTGGACTTCCACGCGGCGCAGGTGGAGGAGTTCAGGAGGGCGGAGGCG GCGGCGGCGGCGAGCGGGAGCGCGGTGAGGATGCTGCTGATGGACGCGACGGCGGCGATG GTGGCGCGGGCGGACGGGCACCCGAGCCGGTACGGGCACTGGGCGCACGAGAACGTGACG CTGTACAACGACTGCG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13692#0      CCCCCGATCCCCTTCTCTCTCCCGCGGCCGGCGGCGCGAGCTTCGGCGGCGGCGGAN-GG 59
consensus_13692#1      --------CCCCTTCTCTCTCCCGCGGCCGGCGGCGCGAGCGTCGGCGGCGGCGGAGCGG 52
                               ********************************* **************  **

consensus_13692#0      CGTCTCTNCTGCTGGAGCTGCTCTNAGCTGCTTGCTTGCTTGCACATTGCTGGTTGTCGC 119
consensus_13692#1      CGTCTCTGCTGCTGGAGCTGCTCTGAGCTGCTTGCTTGCTTGCACATTGCTGGTTGTCGC 112
                       ******* **************** ***********************************

consensus_13692#0      CGATGAAGCTGCTTCAGCGCGTCAACCCCACGGCAGCGGCGTCGCTCACGGCGCTCGCCG 179
consensus_13692#1      CGATGAAGCTGCTTCAGCGCGTCAACCCCACGGCAGCGGCGTCGCTCACGGCGCTCGCCG 172
                       ************************************************************

consensus_13692#0      TCGTCGTGCTGCTCACGGCGTCGGCAAGCCGCCCTTCGTTCCTCCGGAGGTTCGAGCCCA 239
consensus_13692#1      TCGTCGTGCTGCTCACGGCGTCGGCAAGCCGCCCTTCGTTCCTCCGGAGGTTCGAGCCCA 232
                       ************************************************************

consensus_13692#0      GCATCGCGTCGCTGCCGAGGGCCGCCCGGCGCGCCGCGCCGGCGGACTGCGACATCTTCC 299
consensus_13692#1      GCATCGCGTCGCTGCCGAGGGCCGCCCGGCGCGCCGCGCCGGCGGACTGCGACATCTTCC 292
                       ************************************************************

consensus_13692#0      GCGGCGAGTGGGTGCCCGCCACCGNCGCCGACGACGG-GCGGCGCCGTACTACACGAACG 358
consensus_13692#1      GCGGTGAGTGGGTGCCCGCCACCGCCGCCGACGACGGCGCGGCGCCGTACTACACGAACG 352
                       **** ******************* ************ **********************

consensus_13692#0      CCACCTGCGGGGAGATCCAGGAGCACCAGAACTGCATGAAGTACGGCCGCCCCGACCTCG 418
consensus_13692#1      CCACCTGCGGGGAGATCCAGGAGCACCAGAACTGCATGAAGTACGGCCGCCCCGACCTCG 412
                       ************************************************************

consensus_13692#0      GCTTCCTCCGGTGGCGGTGGCGCCCGGAGCGCTGCGAGCTCCCGCGGTTCGACGCGGCGG 478
consensus_13692#1      GCTTCCTCCGGTGGCGGTGGCGCCCGGAGCGCTGCGAGCTCCCGCGGTTCGACGCGGCGG 472
                       ************************************************************

consensus_13692#0      CGTTCCTGGACCTCCTCAGGGGCAAGTCCATGGCGTTCGTCGGCGACTCGCTCTCCAGGA 538
consensus_13692#1      CGTTCCTGGACCTCCTCAGGGGCAAGTCCATGGCGTTCGTCGGCGACTCGCTCTCCAGGA 532
                       ************************************************************

consensus_13692#0      ACCATATGCAGTCTCTCCTGTGCCTCCTCTCCAAGGT----------------------- 575
consensus_13692#1      ACCATATGCAGTCTCTCCTGTGCCTCCTCTCCAAGGTAACAACAAAAACATTTTCGCACA 592
                       *************************************                       

consensus_13692#0      -------------------------------------------------------GGAGA 580
consensus_13692#1      TTTCAGGATAAATTCGCGTCGAAATGTCATTTGTTTTTTTTCTTCTTTTGAAGGTGGAGA 652
                                                                              *****

consensus_13692#0      ATCCGAGAGAAGTCCCCAAGACGGCGGATCCAGAGTTCAGGGCGGTGCGGTACGAGTCCC 640
consensus_13692#1      ATCCGAGAGAAGTCCCCAAGACGGCGGATCCAGAGTTCAGGGCGGTGCGGTACGAGTCCC 712
                       ************************************************************

consensus_13692#0      ACAACTTCACCGTCGCCGTCTTCCGGTCGCCGTACCTCGTGACGGCGAACCAGTCGGACC 700
consensus_13692#1      ACAACTTCACCGTCGCCGTCTTCCGGTCGCCGTACCTCGTGACGGCGAACCAGTCGGACC 772
                       ************************************************************

consensus_13692#0      CCGCCGGCGGGATGTGGGACCTCTACCTCGACGAGCCGGACGCCGCCTGGGCGACCGCCG 760
consensus_13692#1      CCGCCGGCGGGATGTGGGACCTCTACCTCGACGAGCCGGACGCCGCCTGGGCGACCGCCG 832
                       ************************************************************

consensus_13692#0      TGGCGGGCTTCGACTACGTCGTCGTCTCCACGGGGATCTGGTTCAACCGCCCGACCATGT 820
consensus_13692#1      TGGCGGGCTTCGACTACGTCGTCGTCTCCACGGGGATCTGGTTCAACCGCCCGACCATGT 892
                       ************************************************************

consensus_13692#0      TCTACGAGCGCGGCCGCCTCGTCGGCTGCTACAGCTGCCGCCTCCCGGGCGTCCCCGACC 880
consensus_13692#1      TCTACGAGCGCGGCCGCCTCGTCGGCTGCTACAGCTGCCGCCTCCCGGGCGTCCCCGACC 952
                       ************************************************************

consensus_13692#0      TCACCCTCCGCTACTCCCTGCCCCTGGCGTTCCGCACCGCGCTGCGCGCGCTCACCGCCG 940
consensus_13692#1      TCACCCTCCGCTACTCCCTGCCCCTGGCGTTCCGCACCGCGCTGCGCGCGCTCACCGCCG 1012
                       ************************************************************

consensus_13692#0      CAAGCGTGTTCAACGGCACGGTGATCGTGCGCACGCTGTCGCCGACGTCGCACTTCGAGG 1000
consensus_13692#1      CAAGCGTGTTCAACGGCACGGTGATCGTGCGCACGCTGTCGCCGACGTCGCACTTCGAGG 1072
                       ************************************************************

consensus_13692#0      GCGGCGAGTGGGACAAGGGCGGCGACTGCCGGCGCACGCGGCCGACCGCGGCGAGCGAGG 1060
consensus_13692#1      GCGGCGAGTGGGACAAGGGCGGCGACTGCCGGCGCACGCGGCCGACCGCGGCGAGCGAGG 1132
                       ************************************************************

consensus_13692#0      CGCGGATGTCCGGGCTGGACGTGGACTTCCACGCGGCGCAGGTGGAGGAGTTCAGGAGGG 1120
consensus_13692#1      CGCGGATGTCCGGGCTGGACGTGGACTTCCACGCGGCGCAGGTGGAGGAGTTCAGGAGGG 1192
                       ************************************************************

consensus_13692#0      CGGAGGCGGCGGCGGCGGCGAGCGGGAGCGCGGTGAGGATGCTGCTGATGGACGCGACGG 1180
consensus_13692#1      CGGAGGCGGCGGCGGCGGCGAGCGGGAGCGCGGTGAGGATGCTGCTGATGGACGCGACGG 1252
                       ************************************************************

consensus_13692#0      CGGCGATGGTGGCGCGGGCGGACGGGCACCCGAGCCGGTACGGGCACTGGGCGCACGAGA 1240
consensus_13692#1      CGGCGATGGTGGCGCGGGCGGACGGGCACCCGAGCCGGTACGGGCACTGGGCGCACGAGA 1312
                       ************************************************************

consensus_13692#0      ACGTGACGCTGTACAACGACTGCGTGCACTGGTGCCTCCCTGGACCCGTCGATGTGTGGA 1300
consensus_13692#1      ACGTGACGCTGTACAACGACTGCG------------------------------------ 1336
                       ************************                                    

consensus_13692#0      ACGAGATGCTGCTCCAGATGCTGCTGCGTCATCAATCGTGAAGAGTTTTCTGGTTCATCT 1360
consensus_13692#1      ------------------------------------------------------------
                                                                                   

consensus_13692#0      TTGTAATTTTTCTCTCTCAAAATTTTCATATAGAAATAAGTTTATTTAACCCCTCAAATT 1420
consensus_13692#1      ------------------------------------------------------------
                                                                                   

consensus_13692#0      CTATATATGGTGTTTAACTATGACATAGAAGTACCCTCCAATATTCACAGACAAGTGCCC 1480
consensus_13692#1      ------------------------------------------------------------
                                                                                   

consensus_13692#0      TGCCGGTGCACTAGGAATTTAGTACTTGTACTTGCTTTTTTCTATCCGTGAGTTTTGAGT 1540
consensus_13692#1      ------------------------------------------------------------
                                                                                   

consensus_13692#0      GGGAGCAA 1548
consensus_13692#1      --------
                               




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)