These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13722#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1350 fasta sequence [TCCCGGTCTACCCCGACGCCGCGGCGCGGCTGCTTCCTCTCATCGATTCCGCCTCAGATCGGGGAGGAATCGCGGCGAGATCGGCCGCTCCGAATCCGATCCGCGCACGTGGTCTCGCCGGCGGGGTCAGGTTGGTTCGCGGGAGCCGCCGCCGCCGCCGCCGACGACGACGATTGGCCATGGAGACGCCGCCGCCGTTCCAGGAGTCCGCCCACTGCGACGTCTGCCGCTGCACCTTCACCACCTTCCGCCGCCGCCATCACTGCCGCAACTGCGGGAGGACGCTCTGCCACGAGCACTCGTCGTACCATATGGCTCTCCCACAGTACGGGATATACACGGACGTCAGAGTCTGCTATGATTGCTTCAACAAATCCTCCAGTCGTGGTGGTGTTGGCAATGCCGGTTCACCTGGGAGTGTATCTAGTGCAGCTGACTCCTTTTCAGGGTTAAACTTGGGGGAAGATGATGCTTCATCACCTATGAAAAATTCAGCGTTTCACAGTGCACCTGCTGTTATTGAGTGCAAATGTGGAATGCCTTTGTGTATATGCGAGGCTCCGAAACCAGAACCTGTGCCTGTAAAGCAGAGTATCAGCACAACTTCCTCAAGTGCACAGTCGAATCCTAGGCCAAAAAAATCTTCTACCAATCAACAATCTGCTGAATCAAGTGTCAAGAAGGCTTCGGCCACTTCAAGCAGCAACTCAAGCTCATTCTTAAATCTTGGCCTGATGAGCAATGATACTAATGATAAGGGTCCTTCTGAATATGATGTTACTGGGGAGGGACTGAGGGAAGCAATTAAGAGTGGGGATATTAAAGCTGTCAAGAAACTTCTCAGCCA-GGGAGTGGATTCTAATTACTGCGATAAG-CAAGGATTTGCTTTGCTACATTTGGCTGCACTATTTAACCAGACAGAGATTGCTCTTATTCTCATGGATAATGGAGCAAATATTCAGAG-CAAAAATGGACAAGGGGAAACTCCTTTGGATTGTGCTCCAGCCATGCTGCAATACAAGATGCGCCAGAGGATGGAAGAACTTGCGGCATCACAACGACCCTAGTGATATTTTTCTCCTCTTGTTCATGTGCCAAAGATGGTGCCCCCCCTTGCATGGCCCAGAATAAAACCATTTTTACCAACCGAGGGGCCTCTTTGCTGTGGGTATAGTAGTATTTCTGTTGGCACCATCGCCTACAAAATGTCAAAACAACACCAGCTCATAAACTGCATGTTTCGCCAGCTAAAAAAATAATTCATTGTGCTTAATCTTGCCATGTCATCGTGCATACATATGTTCATGTATATGTAATCATATGTCCTGGTTTATTATTAGCATTGGTCTG] [+] EMBL AK121137 [TCCCGGTCTACCCCGACGCCGCGGCGCGGCTGCTTCCTCTCATCGATTCCGCCTCAGATCGGGGAGGAATCGCGGCGAGATCGGCCGCTCCGAATCCGATCCGCGCACGTGGTCTCGCCGGCGGGGTCAGGTTGGTTCGCGGGAGCCGCCGCCGCCGCCGCCGACGACGACGATTGGCCATGGAGACGCCGCCGCCGTTCCAGGAGTCCGCCCACTGCGACGTCTGCCGCTGCACCTTCACCACCTTCCGCCGCCGCCATCACTGCCGCAACTGCGGGAGGACGCTCTGCCACGAGCACTCGTCGTACCATATGGCTCTCCCACAGTACGGGATATACACGGACGTCAGAGTCTGCTATGATTGCTTCAACAAATCCTCCAGTCGTGGTGGTGTTGGCAATGCCGGTTCACCTGGGAGTGTATCTAGTGCAGCTGACTCCTTTTCAGGGTTAAACTTGGGGGAAGATGATGCTTCATCACCTATGAAAAATTCAGCGTTTCACAGTGCACCTGCTGTTATTGAGTGCAAATGTGGAATGCCTTTGTGTATATGCGAGGCTCCGAAACCAGAACCTGTGCCTGTAAAGCAGAGTATCAGCACAACTTCCTCAAGTGCACAGTCGAATCCTAGGCCAAAAAAATCTTCTACCAATCAACAATCTGCTGAATCAAGTGTCAAGAAGGCTTCGGCCACTTCAAGCAGCAACTCAAGCTCATTCTTAAATCTTGGCCTGATGAGCAATGATACTAATGATAAGGGTCCTTCTGAATATGATGTTACTGGGGAGGGACTGAGGGAAGCAATTAAGAGTGGGGATATTAAAGCTGTCAAGAAACTTCTCAGCCA GGGAGTGGATTCTAATTACTGCGATAAG CAAGGATTTGCTTTGCTACATTTGGCTGCACTATTTAACCAGACAGAGATTGCTCTTATTCTCATGGATAATGGAGCAAATATTCAGAG CAAAAATGGACAAGGGGAAACTCCTTTGGATTGTGCTCCAGCCATGCTGCAATACAAGATGCGCCAGAGGATGGAAGAACTTGCGGCATCACAACGACCCTAGTGATATTTTTCTCCTCTTGTTCATGTGCCAAAGATGGTGCCCCCCCTTGCATGGCCCAGAATAAAACCATTTTTACCAACCGAGGGGCCTCTTTGCTGTGGGTATAGTAGTATTTCTGTTGGCACCATCGCCTACAAAATGTCAAAACAACACCAGCTCATAAACTGCATGTTTCGCCAGCTAAAAAAATAATTCATTGTGCTTAATCTTGCCATGTCATCGTGCATACATATGTTCATGTATATGTAATCATATGTCCTGGTTTATTATTAGCATTGGTCTG] [+] EMBL CF325921 [ GCTGCTTCCTCTCATCGATTCCGCCTCAGATCGGGGAGGAATCGCGGCGAGATCGGCCGCTCCGAATCCGATCCGCGCACGTGGTCTCGCCGGCGGGGTCAGGTTGGTTCGCGGGAGCCGCCGCCGCCGCCGCCGACGACGACGA TGGCCATGGAGACGCCGCCGCCGTTCCAGGAGTCCGCCCACTGCGACGTCTGCCGCTGCACCTTCACCACCTTCCGCCGCCGCCATCACTGCCGCAACTGCGGGAGGACGCTCTGCCACGAGCACTCGTCGTACCATATGGCTCTCCCACAGTACGGGATATACACGGACGTCAGAGTCTGCTATGATTGCTTCAACAAATCCTCCAGTCGTGGTGGTGTTGGCAATGCCGGTTCACCTGGGAGTGTATCTAGTGCAGCTGACTCCTTTTCAGGGTTAAACTTGGGGGAAGATGATGCTTCATCACCTATGAAAAATTCAGCGTTTCACAGTGCACCTGCTGTTATTGAGTGCAAATGTGGAATGCCTTTG ] [+] EMBL AK062041 [ CTTCCGCCGCCGCCATCACTGCCGCAACTGCGGGAGGACGCTCTGCCACGAGCACTCGTCGTACCATATGGCTCTCCCACAGTACGGGATATACACGGACGTCAGAGTCTGCTATGATTGCTTCAACAAATCCTCCAGTCGTGGTGGTGTTGGCAATGCCGGTTCACCTGGGAGTGTATCTAGTGCAGCTGACTCCTTTTCAGGGTTAAACTTGGGGGAAGATGATGCTTCATCACCTATGAAAAATTCAGCGTTTCACAGTGCACCTGCTGTTATTGAGTGCAAATGTGGAATGCCTTTGTGTATATGCGAGGCTCCGAAACCAGAACCTGTGCCTGTAA AGAGTATCAGCACAACTTCCTCAAGTGCACAGTCGAATCCTAGGCCAAAAAAATCTTCTACCAATCAACAATCTGCTGAATCAAGTGTCAAGAAGGCTTCGGCCACTTCAAGCAGCAACTCAAGCTCATTCTTAAATCTTGGCCTGATGAGCAATGATACTAATGATAAGGGTCCTTCTGAATATGATGTTACTGGGGAGGGACTGAGGGAAGCAATTAAGAGTGGGGATATTAAAGCTGTCAAGAAACTTCTCAGCCA GGGAGTGGATTCTAATTACTGCGATAAG CAAGGATTTGCTTTGCTACATTTGGCTGCACTATTTAACCAGACAGAGATTGCTCTTATTCTCATGGATAATGGAGCAAATATTCAGAG CAAAAATGGACAAGGGGAAACTCCTTTGGATTGTGCTCCAGCCATGTTGCAATACAAGATGCGCCAGAGGATGGAAGAACTTGCGGCATCACAACGACCCTAGTGATATTTTTCTCCTCTTGTTCATGTGCCAAAGATGGTGCCCCCCCTTGCATGGCCCAGAATAAAACCATTTTTACCAACCGAGGGGCCTCTTTGCTGTGGGTATAGTAGTATTTCTGTTGGCACCATCGCCTACAAAATGTCAAAACAACACCAGCTCATAAACTGCATGTTTCGCCAGCTAAAAAAATAATT ] [+] EMBL AU056949 [ AGGGTTAAACTTGGGGGAAGATGATGCTTCATCACCTATGAAAAATTCAGCGTTTCACAGTGCACCTGCTGTTATTGAGTGCAAATGTGGAATGCCTTTGTGTATATGCGAGGCTCCGAAACCAGAACCTGTGCCTGTAAAGCAGAGTATCAGCACAACTTCCTCAAGTGCACAGTCGAATCCTAGGCCAAAAAAATCTTCTACCAATCAACAATCTGCTGAATCAAGTGTCAAGAAGGCTTCGGCCACTTCAAGCAGCAACTCAAGCTCATTCTTAAATCTTGGCCTGATGAGCAATGATACTAATGATAAGGGTCCTTCTGAATATGATGTTACTGGGGAGGGACTGAGGGAAGCAATTAAGAGTGGGGATATTAAAGCTGTCAAGAAACTTCTCAGCCAGGGGAGTGGATTCTAATTACTGCGATAAG CAAGGATTTGCTTTGCTANATTTGGCTGCACTATTTAACCAGACAGAGATTGCTCTTATTCTCATGGATAATGGAGCAAATATT ] [-] EMBL CB668474 [ CTTGGGGGAAGATGATGCTTCATCACCTATGAAAAATTCAGCGTTTCACAGTGCACCTGCTGTTATTGAGTGCAAATGTGGAATGCCTTTGTGTATATGCGAGGCTCCGAAACCAGAACCTGTGCCTGTAA AGAGTATCAGCACAACTTCCTCAAGTGCACAGTCGAATCCTAGGCCAAAAAAATCTTCTACCAATCAACAATCTGCTGAATCAAGTGTCAAGAAGGCTTCGGCCACTTCAAGCAGCAACTCAAGCTCATTCTTAAATCTTGGCCTGATGAGCAATGATACTAATGATAAGGGTCCTTCTGAATATGATGTTACTGGGGAGGGACTGAGGGAAGCAATTAAGAGTGGGGATATTAAAGCTGTCAAGAAACTTCTCAGCCA GGGAGTGGATTCTAATTACTGCGATAAG CAAGGATTTGCTTTGCTACATTTGGCTGCACTATTTAACCAGACAGAGATTGCTCTTATTCTCATGGATAATGGAGCAAATATTCAGAG CAAAAATGGACAAGGGGAAACTCCTTTGGATTGTGCTCCAGCCATGCTGCAATACAAGATGCGCCAGAGGATGGAAGAACTTGCGGCATCACAACGACCCTAGTGATATTTTTCTCCTCTTGTTCATGTGCCAAAGATGGTGCCCCCCCTTGCATGGCCCAGAATAAAACCATTTTTACCAACCGAGGGGCCTCTTTGCTGTGGGTATAGTAGTATTTCTGTTGGCACCATCGCCTACAAAATGTCAAAACAACACCAGGTCATAAACTGCATGTTTCGCCAGCTAAAAAAA ] [+] EMBL CB675205 [ AATGATAAGGGTCCTTCTGAATATGATGTTACTGGGGAGGGACTGAGGGAAGCAATTAAGAGTGGGGATATTAAAGCTGTCAAGAAACTTCTCAGCCA GGGAGTGGATTCTAATTACTGCGATAAG CAAGGATTTGCTTTGCTACATTTGGCTGCACTATTTAACCAGACAGAGATTGCTCTTATTCTCATGGATAATGGAGCAAATATTCAGAG CAAAAATGGACAAGGGGAAACTCCTTTGGATTGTGCTCCAGCCATGCTGCAATACAAGATGCGCCAGAGGATGGAAGAACTTGCGGCATCACAACGACCCTAGTGATATTTTTCTCCTCTTGTTCATGTGCCAAAGATGGTGCCCCCCCTTGCATGGCCCAGAATAAAACCATTTTTACCAACCGAGGGGCCTCTTTGCTGTGGGTATAGTAGTATTTCTGTTGGCACCATCGCCTACAAAATGTCAAAACAACACCAGCTCATAAACTGCATGTTTCGCCAGCTAAAAAAATAATTCATTGTGCT ] [+] EMBL BI810035 [ GAGGGACTGAGGGAA C ATTAAGAGTGGGGATATTAAA CTGTCAAGAAACTTCTCAGCCA GGGAGTGGATTCTAATTACTGTGATAAGCCAAGGATTTACTTTGCTACATTT GCTGCACTATTTAACCAGACAGAGATTGCTCTTATTCTCATGGATAATGGA CAAATATTCAGAG CCAAAATGGACAAGGGGAAACTCCTTGGGATTGTGCTCCAGCCATGCTGCAATACAAGATGCGCCAGAGGATGGAAGAACTTGCGGCATCACAACGACCCTAGTGATATTTTTCTCCTCTTGTTCATGTGCCAAAGATGGTGCCCCCCCTTGCATGGCCCAGAATAAAACCATTTTTACCAACCGA GGGCCTCTTTGCTGTGGGTATAGTAGTATTTCTGTTGGCACCATCGCCTGC AAATGTCAAAAC ACACCAGCTCATAAACTGCATGTTTCGCCAGCTAAAAAAATAATTCATTGTGCTTAAaaaaaaaa ] [+] EMBL BI795169 [ GATTCTAATTACTGTGATAAG CAAGGATTTACTTTGCTACATTTGGCTGCACTATTTAACCAGACAGAGATTGCTCTTATTCTCATGGATAATGGAGCAAATATTCAGAGCCATAAATGGACAAGGGGAAACTCCTTGGGATTGTGCTCCAGCCATGCTGCAATACAAGATGCGCCAGAGGATGGAAGAACTTGCGGCATCACAACGACCCTAGTGATATTTTTCTCCTCTTGTTCATGTGCCAAAGATGGTGCCCCCCCTTGCATGGCCCAGAATAAAACCATTTTTACCAACCGAGGGGCCTCTTTGCTGTGGGTATAGTAGTATTTCTGTTGGCACCATCGCCTGCAAAATGTCAAAACAACACCAGCTCATAAACTGCATGTTTCGCCAGCTAAAAAAATAATTCATTGTGCTTAATCTTGCCATGTCATCGTGCATACATATGTTCATGTATATGTAATCATATGTCCTGGTTTAaaaa ] consensusID : consensus_13722#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1072 fasta sequence [TCGGCCCCGACGACGGACAGGCCGCTGTGGTTCCCCGGCGCGGTGGCGCCGGACTACCTGGACGGGTCGCTCGTCGGCGACTACGGCTTCGACCCGTTCGGCCTCGGGAAGCCGACGACGACGATGGCCATGGAGACGCCGCCGCCGTTCCAGGAGTCCGCCCACTGCGACGTCTGCCGCTGCACCTTCACCACCTTCCGCCGCCGCCATCACTGCCGCAACTGCGGGAGGACGCTCTGCCACGAGCACTCGTCGTACCATATGGCTCTCCCACAGTACGGGATATACACGGACGTCAGAGTCTGCTATGATTGCTTCAACAAATCCTCCAGTCGTGGTGGTGTTGGCAATGCCGGTTCACCTGGGAGTGTATCTAGTGCAGCTGACTCCTTTTCAGGGTTAAACTTGGGGGAAGATGATGCTTCATCACCTATGAAAAATTCAGCGTTTCACAGTGCACCTGCTGTTATTGAGTGCAAATGTGGAATGCCTTTGTGTATATGCGAGGCTCCGAAACCAGAACCTGTGCCTGTAAAGAGTATCAGCACAACTTCCTCAAGTGCACAGTCGAATCCTAGGCCAAAAAAATCTTCTACCAATCAACAATCTGCTGAATCAAGTGTCAAGAAGGCTTCGGCCACTTCAAGCAGCAACTCAAGCTCATTCTTAAATCTTGGCCTGATGAGCAATGATACTAATGATAAGGGTCCTTCTGAATATGATGTTACTGGGGAGGGACTGTATGGAAGC-ATTAAGAGTGGGGATATTAAAGCTGTCAAGAAACTTCTCAGCCAGGGAGTGGATTCTAATTACTGCGATAAGCAAGGATTTGCTTTGCTACATTTGGCTGCACTATTTAACCAGACAGAGATTGCTCTTATTCTCATGGNTAATGGAGCAAATATTCAGNGCAAAAAATGGACAAGGGGAAACTCCTTTGGATTGTGCTCCAGCCATGCTGCAATACAAGCTGCGCCAGAGGATTGGGAGGACCTTNCGGGCATTCACAACGGNCCCTTGGTGACTAATTTTTCCTCCCTCTTTGTTCAANGGTTNCCNAAANNTGGTTTCC] [+] EMBL CB668473 [TCGGCCCCGACGACGGACAGGCCGCTGTGGTTCCCCGGCGCGGTGGCGCCGGACTACCTGGACGGGTCGCTCGTCGGCGACTACGGCTTCGACCCGTTCGGCCTCGGGAAGCCGACGACGACGATGGCCATGGAGACGCCGCCGCCGTTCCAGGAGTCCGCCCACTGCGACGTCTGCCGCTGCACCTTCACCACCTTCCGCCGCCGCCATCACTGCCGCAACTGCGGGAGGACGCTCTGCCACGAGCACTCGTCGTACCATATGGCTCTCCCACAGTACGGGATATACACGGACGTCAGAGTCTGCTATGATTGCTTCAACAAATCCTCCAGTCGTGGTGGTGTTGGCAATGCCGGTTCACCTGGGAGTGTATCTAGTGCAGCTGACTCCTTTTCAGGGTTAAACTTGGGGGAAGATGATGCTTCATCACCTATGAAAAATTCAGCGTTTCACAGTGCACCTGCTGTTATTGAGTGCAAATGTGGAATGCCTTTGTGTATATGCGAGGCTCCGAAACCAGAACCTGTGCCTGTAAAGAGTATCAGCACAACTTCCTCAAGTGCACAGTCGAATCCTAGGCCAAAAAAATCTTCTACCAATCAACAATCTGCTGAATCAAGTGTCAAGAAGGCTTCGGCCACTTCAAGCAGCAACTCAAGCTCATTCTTAAATCTTGGCCTGATGAGCAATGATACTAATGATAAGGGTCCTTCTGAATATGATGTTACTGGGGAGGGACTGTATGGAAGC ATTAAG ] [+] EMBL D43190 [ GGGTCCTTCTGAATATGATGTTACTGGGGAGGGACTG AGGGAAGCAATTAAGAGTGGGGATATTAAAGCTGTCAAGAAACTTCTCAGCCAGGGAGTGGATTCTAATTACTGCGATAAGCAAGGATTTGCTTTGCTACATTTGGCTGCACTATTTAACCAGACAGAGATTGCTCTTATTCTCATGGNTAATGGAGCAAATATTCAGNGCAAAAAATGGACAAGGGGAAACTCCTTTGGATTGTGCTCCAGCCATGCTGCAATACAAGCTGCGCCAGAGGATTGGGAGGACCTTNCGGGCATTCACAACGGNCCCTTGGTGACTAATTTTTCCTCCCTCTTTGTTCAANGGTTNCCNAAANNTGGTTTCC] consensusID : consensus_13722#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 673 fasta sequence [CAATCTGCTGAATCAGTGTTCAAGAAGGCTTCGGCCACTTNAAGCGCAACTCAAGCTCTTCTTAATCTTGGCCTGATGNGCAATGATCCTATGATAAGGGTCCTTCTGAANATGATGTTACTGGGGAGGGACTGAGGGAAGCCAATTAAGAGTGGGGATATTAAAGCTGTCAAGAAACTTNTCAGCCCAGGGAGTGGATTCTAATTACTGCGNTAAGCAAGGATTTGCTTTGCTACATTTGGCTGCACTATTTAACCAGACAGAGATTGCTCTTATTCTCATGGATAATGGNGCAAATATTCAGNGCAAAATGGACAAGGGGAAACTCCTTTGGATTGTGCTCCAGCCATGCTGCAATACAAGATGCGCCAGAGGATGGAAGAACTTGCGGCATCACAACGACCCTAGTGATATTTTTCTCCTCTTGTTCATGTGCCAAAGATGGTGCCCCCCCTTGCATGGCCCAGAATAAAACCATTTTTACCAACCGAGGGGCCTCTTTGCTGTGGGTATAGTAGTATTTCTGTTGGCACCATCGCCTACAAAATGTCAAAACAACACCAGCTCATAAACTGCATGTTTCGCCAGCTAAAAAAATAATTCATTGTGCTTAATCTTGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AU056950 [CAATCTGCTGAATCAGTGTTCAAGAAGGCTTCGGCCACTTNAAGCGCAACTCAAGCTCTTCTTAATCTTGGCCTGATGNGCAATGATCCTATGATAAGGGTCCTTCTGAANATGATGTTACTGGGGAGGGACTGAGGGAAGCCAATTAAGAGTGGGGATATTAAAGCTGTCAAGAAACTTNTCAGCCCAGGGAGTGGATTCTAATTACTGCGNTAAGCAAGGATTTGCTTTGCTACATTTGGCTGCACTATTTAACCAGACAGAGATTGCTCTTATTCTCATGGATAATGGNGCAAATATTCAGNGCAAAATGGACAAGGGGAAACTCCTTTGGATTGTGCTCCAGCCATGCTGCAATACAAGATGCGCCAGAGGATGGAAGAACTTGCGGCATCACAACGACCCTAGTGATATTTTTCTCCTCTTGTTCATGTGCCAAAGATGGTGCCCCCCCTTGCATGGCCCAGAATAAAACCATTTTTACCAACCGAGGGGCCTCTTTGCTGTGGGTATAGTAGTATTTCTGTTGGCACCATCGCCTACAAAATGTCAAAACAACACCAGCTCATAAACTGCATGTTTCGCCAGCTAAAAAAATAATTCATTGTGCTTAATCTTGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL CA765210 [ tgGGATTGTGCTCCAGCCATGCTGCAATACAAGATGCGCCAGAGGATGGAAGAACTTGCGGCATCACAACGACCCTAGTGATATTTTTCTCCTCTTGTTCATGTGCCAAAGATGGTGCCCCCCCTTGCATGGCCCAGAATAAAACCATTTTTACCAACCGAGGGGCCTCTTTGCTGTGGGTATAGTAGTA TTGGCACCATCGCCTGCAAAATGTCAAAACAACACCAGCTCATAAACTGCATGTTTCGCCAGCTAAAAAAATAATT ] consensusID : consensus_13722#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 275 fasta sequence [CCGCCCACGCGTCCGGGAAGAACTTGCGGCATCTACAACGACCCTAGTGATATTTTTCTCCTCTTGTTCATGTGCCAAAGATGGTGCCCCCCCTTGCATGGCCCAGAATAAAACCATTTTTACCAACCGAGGGGCCTCTTTGCTGTGGGTATAGTAGTATTTCTGTTGGCACCATCGCCTGCAAAATGTCAAAACAACACCAGCTCATAAACTGCATGTTTCGCCAGCTAAAAAAATAATTCATTGNGCTTAATCTTGCCATGTCAAAAAAAAAA] [+] EMBL BM419680 [CCGCCCACGCGTCCGGGAAGAACTTGCGGCATCTACAACGACCCTAGTGATATTTTTCTCCTCTTGTTCATGTGCCAAAGATGGTGCCCCCCCTTGCATGGCCCAGAATAAAACCATTTTTACCAACCGAGGGGCCTCTTTGCTGTGGGTATAGTAGTATTTCTGTTGGCACCATCGCCTGCAAAATGTCAAAACAACACCAGCTCATAAACTGCATGTTTCGCCAGCTAAAAAAATAATTCATTGNGCTTAATCTTGCCATGTCAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13722#2 ------------------------------------------------------------ consensus_13722#3 ------------------------------------------------------------ consensus_13722#0 TCCCGGTCTACCCCGACGCCGCGGCGCGGCTGCTTCCTCTCATCGATTCCGCCTCAGATC 60 consensus_13722#1 ------------------------------------------------------------ consensus_13722#2 ------------------------------------------------------------ consensus_13722#3 ------------------------------------------------------------ consensus_13722#0 GGGGAGGAATCGCGGCGAGATCGGCCGCTCCGAATCCGATCCGCGCACGTGGTCTCGCCG 120 consensus_13722#1 ------------------------------------------------------------ consensus_13722#2 ------------------------------------------------------------ consensus_13722#3 ------------------------------------------------------------ consensus_13722#0 GCGGGGTCAGGTTGGTTCGCGGGAGCCGCCGCCGCCGCCGCCGACGACGACGATTGGCCA 180 consensus_13722#1 ------------------------------------------------------------ consensus_13722#2 ------------------------------------------------------------ consensus_13722#3 ------------------------------------------------------------ consensus_13722#0 TGGAGACGCCGCCGCCGTTCCAGGAGTCCGCCCACTGCGACGTCTGCCGCTGCACCTTCA 240 consensus_13722#1 ------------------------------------------------------------ consensus_13722#2 ------------------------------------------------------------ consensus_13722#3 ------------------------------------------------------------ consensus_13722#0 CCACCTTCCGCCGCCGCCATCACTGCCGCAACTGCGGGAGGACGCTCTGCCACGAGCACT 300 consensus_13722#1 ------------------------------------------------------------ consensus_13722#2 ------------------------------------------------------------ consensus_13722#3 ------------------------------------------------------------ consensus_13722#0 CGTCGTACCATATGGCTCTCCCACAGTACGGGATATACACGGACGTCAGAGTCTGCTATG 360 consensus_13722#1 ------------------------------------------------------------ consensus_13722#2 ------------------------------------------------------------ consensus_13722#3 ------------------------------------------------------------ consensus_13722#0 ATTGCTTCAACAAATCCTCCAGTCGTGGTGGTGTTGGCAATGCCGGTTCACCTGGGAGTG 420 consensus_13722#1 ------------------------------------------------------------ consensus_13722#2 ------------------------------------------------------------ consensus_13722#3 ------------------------------------------------------------ consensus_13722#0 TATCTAGTGCAGCTGACTCCTTTTCAGGGTTAAACTTGGGGGAAGATGATGCTTCATCAC 480 consensus_13722#1 ------------------------------------------------------------ consensus_13722#2 ------------------------------------------------------------ consensus_13722#3 ------------------------------------------------------------ consensus_13722#0 CTATGAAAAATTCAGCGTTTCACAGTGCACCTGCTGTTATTGAGTGCAAATGTGGAATGC 540 consensus_13722#1 ------------------------------------------------------------ consensus_13722#2 ------------------------------------------------------------ consensus_13722#3 ------------------------------------------------------------ consensus_13722#0 CTTTGTGTATATGCGAGGCTCCGAAACCAGAACCTGTGCCTGTAAAGCAGAGTATCAGCA 600 consensus_13722#1 ------------------------------------------------------------ consensus_13722#2 --------------------------------------------------------CAAT 4 consensus_13722#3 ------------------------------------------------------------ consensus_13722#0 CAACTTCCTCAAGTGCACAGTCGAATCCTAGGCCAAAAAAATCTTCTACCAATCAACAAT 660 consensus_13722#1 ----------------------------------TCGGCCCCGACGACGGACAGGCCGCT 26 consensus_13722#2 CTGCTGAATCAGTGTTCAAGAAGGCTTCGGCCACTTNAAGC-GCAACTCAAGCTCTTCTT 63 consensus_13722#3 ------------------------------------------------------------ consensus_13722#0 CTGCTGAATCAAGTGTCAAGAAGGCTTCGGCCACTTCAAGCAGCAACTCAAGCTCATTCT 720 consensus_13722#1 GTGGTTCCCCGGCGCGGTGGCGCCGGACTACCTGGACGGGTCGCTCGTCGGCGACTACGG 86 consensus_13722#2 ---AATCTTGGCCTGATGNGCAATGATCCTA-TGATAAGGGTCCTTCTGAANATGATGTT 119 consensus_13722#3 ------------------------------------------------------------ consensus_13722#0 TA-AATCTTGGCCTGATGAGCAATGATACTAATGATAAGGGTCCTTCTGAATATGATGTT 779 consensus_13722#1 CTTCGACCCGTTCGGCCTCGGGAAGCCGACGACGACGATGGCCATGGAGACGCCGCCGCC 146 consensus_13722#2 ACTGGGGAGGGACTGAGGGAAGCCAATTAAGAGTGGGGATATTAAAGCTGTCAAGAAACT 179 consensus_13722#3 ------------------------------------------------------------ consensus_13722#0 ACTGGGGAGGGACTGAGGGAAGC-AATTAAGAGTGGGGATATTAAAGCTGTCAAGAAACT 838 consensus_13722#1 GTTCCAGGAGTCCGCCCACTGCGACGTCTGCCGCTGCACCTTCACCACCTTCCGCCGCCG 206 consensus_13722#2 TNTCAGCCCAGGGAGTGGATTCTAATTACTGCGNTAAGCAAGGATTTGCTTTGCTACATT 239 consensus_13722#3 ------------------------------------------------------------ consensus_13722#0 TCTCAGCC-AGGGAGTGGATTCTAATTACTGCGATAAGCAAGGATTTGCTTTGCTACATT 897 consensus_13722#1 CCATCACTGCCGCAACTGCGGGAGGACGCTCTGCCACGAGCACTCGTCGTACCATATGGC 266 consensus_13722#2 TGGCTGCACTATTTAACCAGACAGAGATTGCTCTTATTCTCATGGATAATGGNGCAAATA 299 consensus_13722#3 ------------------------------------------------------------ consensus_13722#0 TGGCTGCACTATTTAACCAGACAGAGATTGCTCTTATTCTCATGGATAATGGAGCAAATA 957 consensus_13722#1 TCTCCCACAGTACGGGATATACACGGACGTCAGAGTCTGCTATGATTGCTTCAACAAATC 326 consensus_13722#2 TTCAGNGCAAAA-TGGACAAGGGGAAACTCCTTTGGATTGTGCTCCAGCCATGCTGCAAT 358 consensus_13722#3 ------------------------------------------------------------ consensus_13722#0 TTCAGAGCAAAAATGGACAAGGGGAAACTCCTTTGGATTGTGCTCCAGCCATGCTGCAAT 1017 consensus_13722#1 CTCCAGTCGTGGTGGTGTTGGCAATGCCGGTTCACCTGGGAGTGTATCTAGTGCAGCTGA 386 consensus_13722#2 ACAAGATGC--GCCAGAGGAT---GGAAGAACTTGCGGCATC----ACAACGACCCTAGT 409 consensus_13722#3 -------CC--GCCCACGCGTCCGGGAAGAACTTGCGGCATCT---ACAACGACCCTAGT 48 consensus_13722#0 ACAAGATGC--GCCAGAGGAT---GGAAGAACTTGCGGCATC----ACAACGACCCTAGT 1068 consensus_13722#1 CTCCTTTTCAGGGTTAAACTTGGGGGAAGATGATGCTTCATCACCTATGAAAAATTCAGC 446 * * * ****** *** **** * * * ** consensus_13722#2 GAT--ATTTTTCTCCTCTTGTTCATGTGC-CAAAGATGGTGCCCCCCCTTGCATGGCCCA 466 consensus_13722#3 GAT--ATTTTTCTCCTCTTGTTCATGTGC-CAAAGATGGTGCCCCCCCTTGCATGGCCCA 105 consensus_13722#0 GAT--ATTTTTCTCCTCTTGTTCATGTGC-CAAAGATGGTGCCCCCCCTTGCATGGCCCA 1125 consensus_13722#1 GTTTCACAGTGCACCTGCTGTTATTGAGTGCAAATGTGGAATGCCTTTGTGTATATGCGA 506 * * * * * *** **** ** * **** *** ** ** ** * * consensus_13722#2 GAAT--AAAACCA---TTTTTACCAACCGAGGG-------GCCTCTTTGCTGTGGGTATA 514 consensus_13722#3 GAAT--AAAACCA---TTTTTACCAACCGAGGG-------GCCTCTTTGCTGTGGGTATA 153 consensus_13722#0 GAAT--AAAACCA---TTTTTACCAACCGAGGG-------GCCTCTTTGCTGTGGGTATA 1173 consensus_13722#1 GGCTCCGAAACCAGAACCTGTGCCTGTAAAGAGTATCAGCACAACTTCCTCAAGTGCACA 566 * * ****** * * ** ** * * *** * * * * consensus_13722#2 GTAGTATTTCTG-TTGGCACCATCGCCTACAAAATGTCAAAACAACACCAGCTCATAAAC 573 consensus_13722#3 GTAGTATTTCTG-TTGGCACCATCGCCTGCAAAATGTCAAAACAACACCAGCTCATAAAC 212 consensus_13722#0 GTAGTATTTCTG-TTGGCACCATCGCCTACAAAATGTCAAAACAACACCAGCTCATAAAC 1232 consensus_13722#1 GTCGAATCCTAGGCCAAAAAAATCTTCTACCAA---TCAACAATCTGCTGAATCAAGTGT 623 ** * ** * * *** ** * ** **** * * *** consensus_13722#2 T--GCATGTTTCG-CCAGCTAAAAAAATAATTCA---TTGTGCTTAA-TCTTGCCAAAAA 626 consensus_13722#3 T--GCATGTTTCG-CCAGCTAAAAAAATAATTCA---TTGNGCTTAA-TCTTGCCATGTC 265 consensus_13722#0 T--GCATGTTTCG-CCAGCTAAAAAAATAATTCA---TTGTGCTTAA-TCTTGCCATGTC 1285 consensus_13722#1 CAAGAAGGCTTCGGCCACTTCAAGCAGCAACTCAAGCTCATTCTTAAATCTTGGCCTGAT 683 * * * **** *** * ** * ** *** * ***** ***** * consensus_13722#2 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA------------- 673 consensus_13722#3 AAAAAAAAAA-------------------------------------------------- 275 consensus_13722#0 ATCGTGCATACATATGTTCATGTATATGTAATCATATGTCCTGGTTTATTATTAGCATTG 1345 consensus_13722#1 GAGCAATGATACTAATGATAAGGGTCCTTCTGAATATGATGTTACTGGGGAGGGACTGTA 743 consensus_13722#2 ------------------------------------------------------------ consensus_13722#3 ------------------------------------------------------------ consensus_13722#0 GTCTG------------------------------------------------------- 1350 consensus_13722#1 TGGAAGCATTAAGAGTGGGGATATTAAAGCTGTCAAGAAACTTCTCAGCCAGGGAGTGGA 803 consensus_13722#2 ------------------------------------------------------------ consensus_13722#3 ------------------------------------------------------------ consensus_13722#0 ------------------------------------------------------------ consensus_13722#1 TTCTAATTACTGCGATAAGCAAGGATTTGCTTTGCTACATTTGGCTGCACTATTTAACCA 863 consensus_13722#2 ------------------------------------------------------------ consensus_13722#3 ------------------------------------------------------------ consensus_13722#0 ------------------------------------------------------------ consensus_13722#1 GACAGAGATTGCTCTTATTCTCATGGNTAATGGAGCAAATATTCAGNGCAAAAAATGGAC 923 consensus_13722#2 ------------------------------------------------------------ consensus_13722#3 ------------------------------------------------------------ consensus_13722#0 ------------------------------------------------------------ consensus_13722#1 AAGGGGAAACTCCTTTGGATTGTGCTCCAGCCATGCTGCAATACAAGCTGCGCCAGAGGA 983 consensus_13722#2 ------------------------------------------------------------ consensus_13722#3 ------------------------------------------------------------ consensus_13722#0 ------------------------------------------------------------ consensus_13722#1 TTGGGAGGACCTTNCGGGCATTCACAACGGNCCCTTGGTGACTAATTTTTCCTCCCTCTT 1043 consensus_13722#2 ----------------------------- consensus_13722#3 ----------------------------- consensus_13722#0 ----------------------------- consensus_13722#1 TGTTCAANGGTTNCCNAAANNTGGTTTCC 1072 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||