These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13743#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 2847 fasta sequence [GCTCTCCTCGATCGACGATCCATGGATGCAGAGTAGCTAGGGGCAAAGAAAAAAGAACATTTAATTCTTGCAATCCTAGCTAGTAATATATATTCGAGTCGAATTGTTTGTTTGTTTGTTTGTTGCTAGGTTTGTCTGGGGGTTTGGTTAGTTATAAAAAGAGAGCTAGCAATTCTCCACATTTCTCTCCCGGTTCCTCCGCTGCAACCGTTCTCTTGCTTCAATTCTCGATTCGCCATGCATGCAAGAGTCTGCTGAACGCCGATTGATTAATTGTCTTGTAGTATCTAGGAAAGCAATCCGCTGCTGTATCCTCCTCCTATCTGGATTCTGGAGTGATCCCTGCCCGCTGGCTCCATCCCGCCGCTGCCGACACACATAATTAAACAGCTACTAGTTGATCGATATTATTTCTTCTCTTCTCT-TGGGGTCATCC-CTCTCAAATCAAGCTCTACTACTCTACATACTCTCTATCGGGTGCCGGCACTGCAGTCCCCCAGGTGAGTGAGTGAGTGAGTGGAGTGCGGTGGCAGAGAGCTAGCTAGGCATGAAGTACAGCAAGGAAGCAAAGCCCGAGAGGGCGGCGGGAGGGCGGTCGAGAGCCGTGCCGGTGGCGCTCCTGTTGGTCGTGCTCTGCGCCTTCTCCTTCTACCTCGGCGGGATCTACAGCACCGGCCGCAGCTTGCTCGATGTCAATGGCATCGTCGTCAAGGGGGCCTCTTCTTCCTCCTCTGCCTCTGCCGTTGCCATTCAAAAGGACACCAACACCAAAGCCGTCGTCGTCTTCCCAGAGTGCCCCGCCGACTACCAGGACTACACTCCCTGCACCGATCCCAAGCGTTGGCGCAAGTATGGCAACTACCGGCTGAGCTTCATGGAGCGTCACTGCCCACCGGCGGTGGAGCGCAAGGAGTGCCTGGTGCCGCCGCCGCAGGGGTACAAGGCGCCCATCCGGTGGCCCAAGAGCAAGGACCAGTGCTGGTACAGGAACGTCCCCTACGACTGGATCAACAGCCAGAAGTCCAACCAGCACTGGCTCCGCAAGGAAGGCGACAAGTTCATCTTCCCCGGCGGCGGCACCATGTTCCCCAACGGCGTCGGAGCCTACGCAGACCTCATGGCGGAGCTCATCCCGGGCATGACGGACGGCACGGTGCGCACGGCGCTGGACACGGGATGCGGCGTAGCCAGCTGGGGAGGCGACCTGCTGGGGCGCGGGCGGGGCATCCTGACGCTGTCGCTGGCGCCCAGGGACAACCACGAGGCGCAGGTGCAGTTCGCGCTGGAGCGGGGCATCCCGGCCATCCTGGGGATCATCTCCACGCAGCGCCTGCCCTTCCCGTCCGCGGCATTCGACATGGCGCACTGCTCCAGGTGCCTCATCCCGTGGACAGAGTTCGGCGGCCTCTACCTGCTGGAGGTGCACCGCGTGCTCCGCCCCGGGGGCTTCTGGGCGCTCTCCGGCCCGCCCGTCAACTACGAGAACCGCTGGCACGGCTGGAACACCACCGCCGCCGCGCAGAAGGCCGACCTCGACCGCCTCAAGAAGACGCTCGCCTCCATGTGCTTCAAGCCCTACAGCAAGAAGGGGGACATCGCCGTGTGGCAGAAGTCCACCGACCCTGCCTGCTACGACAAGCTCACGCCGGTCTCCTCCCCTCCCAAGTGCGACGACAGCGTCGACCCGGACGCCGCCTGGTACGTGCCCATGCGCTCCTGCCTCACCTCGCCTTCTTCCACTTCCTCGCGCTACAAGAAGCTGGCGCTCGACGCCACCCCCAAGTGGCCGCAGCGCCTCGCCGTCGCCCCAGAGCGCATCGCCACCGTCCCCGGGAGCAGTGCCGCCGCCTTCAAGCACGACGATGGCAAGTGGAAGCTCCGGACCAAGCACTACAAGGCTCTGCTCCCGGCGCTGGGGAGCGACAAGATCAGGAACGTGATGGACATGAACACCGTCTACGGAGGCTTCGCCGCCAGCCTCATCAAGGACCCCGTCTGGGTCATGAACGTCGTCTCCTCCTACGGACCCAACTCCCTCGGCGTCGTCTTCGACAGAGGCCTCATCGGCACCAACCACGACTGGTGTGAGGCATTCTCTACATACCCCAGGACGTACGATCTATTGCATCTTGATGGCTTGTTTACTGCAGAGTCTCATAGGTGCGAGATGAAGTTTGTACTTCTTGAGATGGACCGTATCCTTCGTCCCACTGGTTATGCCATAATCCGCGAGAACGCCTACTTTCTGGATTCTGTAGCCACCATTGCCAAAGGAATGAGATGGAACTGTGACAAGCATGACACCGAACACAAGGCAGACAAGGAG-AAGGTCCTCATCTGCCAGA-AAAAGCTTT-GG-TCAGGAAAGAACACCCAGCA-TTGAAAAAAAAAATCAATAACTTGATAGCCTCACCTTGATCGAACCTGGAGGGATCACAATGTAAATCTGCTCAACGATTTCAAGACAGTGCTCAACCTAAGGCACTTCA-CCCTCCCACTAGACTTCACACTCTGATACAAGAACGTTCGTATAATGATTAAATTAAATAAAATGAGCAATACTCCAATATAGGATCCAATACTTCCTACTCTCTGCCAGTTATCACACAATTATTTTTTACAGTTACTAGGGGACCAATTAATTAATACCACCAAGAGGCAGCTGTAAGTTATTACTTTTTTTTAGAATGGACAACTGTAAGTTACTTTTATACTACTATATAGCATGTTCATTTGTATTAGCCATAGCTTGTTTCTACGATTGTAACAATAGGAA-CGGC-TATATATTTATTTTAATTGAATGTTTGCAGGAGTAAGATATTAAAGTTGGTAAAAAAAAAAAAAAAAAAA] [+] EMBL CB630397 [GCTCTCCTCGATCGACGATCCATGGATGCAGAGTAGCTAGGGGCAAAGAAAAAAGAACATTTAATTCTTGCAATCCTAGCTAGTAATATATATTCGAGTCGAATTGTTTGTTTGTTTGTTTGTTGCTAGGTTTGTCTGGGGGTTTGGTTAGTTATAAAAAGAGAGCTAGCAATTCTCCACATTTCTCTCCCGGTTCCTCCGCTGCAACCGTTCTCTTGCTTCAATTCTCGATTCGCCATGCATGCAAGAGTCTGCTGAACGCCGATTGATTAATTGTCTTGTAGTATCTAGGAAAGCAATCCGCTGCTGTATCCTCCTCCTATCTGGATTCTGGAGTGATCCCTGCCCGCTGGCTCCATCCCGCCGCTGCCGACACACATAATTAAACAGCTACTAGTTGATCGATATTATTTCTTCTCTTCTCT TGGGGTCATCC CTCTCAAATCAAGCTCTACTACTCTACATACTCTCTATCGGGTGCCGGCACTGCAGTCCCCCAGGTGAGTGAGTGAGTGAGTGGAGTGCGGTGGCAGAGAGCTAGCTAGGCATGAAGTACAGCAAGGAAGCAAAGCCCGAGAGGGCGGCGGGAGGGCGGTCGAGAGCCGTGCCGGTGGCGCTCCTGTTGGTCGTGCTCTGCGCCTTCTCCTTCTACCTCGGTGGGATCTACAGCACCGGCCGCAGCTTGCTCGATGTCAATGGCATCGTCGTCAAGGGGGCCTCTTCTTCCTCCTCTGCCTCTGCCGTTGCCATTCAAAAGGACACCAACACCAAAGCCGTCGTCGTCTTCCCAGAGTGCCCCGCCGACTACCAGGACTACACTC ] [+] EMBL AK065174 [ AGAGTAGCTGGGGGCAAAGAAAAAAAAACATTTAATTCTTGCAATCCTAGCTAGTAATATATATTCGAGTCGAATTGTTTGTTTGTTTGTTTGTTGCTAGGTTTGTCTGGGGGTTTGGTTAGTTATAAAAAGAGAGCTAGCAATTCTCCACATTTCTCTCCCGGTTCCTCCGCTGCAACCGTTCTCTTGCTTCAATTCTCGATTCGCCATGCATGCAAGAGTCTGCTGAACGCCGATTGATTAATTGTCTTGTAGTATCTAGGAAAGTAATCCGCTGCTGTATCCTCCTCCTATCTGGATTCTGGAGTGATCCCTGCCCGCTGGCTCCATCCCGCCGCTGCCGACACACATAATTAAACAGCTACTAGTTGATCGATATTATTTCTTCTCTTCTCT TGGGGTCATCC CTCTCAAATCAAGCTCTACTACTCTACATACTCTCTATCGGGTGCCGGCACTGCAGTCCCCCAGGTGAGTGAGTGAGTGAGTGGAGTGCGGTGGCAGAGAGCTAGCTAGGCATGAAGTACAGCAAGGAAGCAAAGCCCGAGAGGGCGGCGGGAGGGCGGTCGAGAGCCGTGCCGGTGGCGCTCCTGTTGGTCGTGCTCTGCGCCTTCTCCTTCTACCTCGGCGGGATCTACAGCACCGGCCGCAGCTTGCTCGATGTCAATGGCATCGTCGTCAAGGGGGCCTCTTCTTCCTCCTCTGCCTCTGCCGTTGCCATTCAAAAGGACACCAACACCAAAGCCGTCGTCGTCTTCCCAGAGTGCCCCGCCGACTACCAGGACTACACTCCCTGCACCGATCCCAAGCGTTGGCGCAAGTATGGCAACTACCGGCTGAGCTTCATGGAGCGTCACTGCCCACCGGCGGTGGAGCGCAAGGAGTGCCTGGTGCCGCCGCCGCAGGGGTACAAGGCGCCCATCCGGTGGCCCAAGAGCAAGGACCAGTGCTGGTACAGGAACGTCCCCTACGACTGGATCAACAGCCAGAAGTCCAACCAGCACTGGCTCCGCAAGGAAGGCGACAAGTTCATCTTCCCCGGCGGCGGCACCATGTTCCCCAACGGCGTCGGAGCCTACGCAGACCTCATGGCGGAGCTCATCCCGGGCATGACGGACGGCACGGTGCGCACGGCGCTGGACACGGGATGCGGCGTAGCCAGCTGGGGAGGCGACCTGCTGGGGCGCGGGCGGGGCATCCTGACGCTGTCGCTGGCGCCCAGGGACAACCACGAGGCGCAGGTGCAGTTCGCGCTGGAGCGGGGCATCCCGGCCATCCTGGGGATCATCTCCACGCAGCGCCTGCCCTTCCCGTCCGCGGCATTCGACATGGCGCACTGCTCCAGGTGCCTCATCCCGTGGACAGAGTTCGGCGGCCTCTACCTGCTGGAGGTGCACCGCGTGCTCCGCCCCGGGGGCTTCTGGGCGCTCTCCGGCCCGCCCGTCAACTACGAGAACCGCTGGCACGGCTGGAACACCACCGCCGCCGCGCAGAAGGCCGACCTCGACCGCCTCAAGAAGACGCTCGCCTCCATGTGCTTCAAGCCCTACAGCAAGAAGGGGGACATCGCCGTGTGGCAGAAGTCCACCGACCCTGCCTGCTACGACAAGCTCACGCCGGTCTCCTCCCCTCCCAAGTGCGACGACAGCGTCGACCCGGACGCCGCCTGGTACGTGCCCATGCGCTCCTGCCTCACCTCGCCTTCTTCCACTTCCTCGCGCTACAAGAAGCTGGCGCTCGACGCCACCCCCAAGTGGCCGCAGCGCCTCGCCGTCGCCCCAGAGCGCATCGCCACCGTCCCCGGGAGCAGTGCCGCCGCCTTCAAGCACGACGATGGCAAGTGGAAGCTCCGGACCAAGCACTACAAGGCTCTGCTCCCGGCGCTGGGGAGCGACAAGATCAGGAACGTGATGGACATGAACACCGTCTACGGAGGCTTCGCCACCAGCCTCATCAAGGACCCCGTCTGGGTCATGAACGTCGTCTCCTCCTACGGACCCAACTCCCTCGGCGTCGTCTTCGACAGAGGCCTCATCGGCACCAACCACGACTGGTGTGAGGCATTCTCTACATACCCCAGGACGTACGATCTATTGCATCTTGATGGCTTGTTTACTGCAGAGTCTCATAGGTGCGAGATGAAGTTTGTACTTCTTGAGATGGACCGTATCCTTCGTCCCACTGGTTATGCCATAATCCGCGAGAACGCCTACTTTCTGGATTCTGTAGCCACCATTGCCAAAGGAATGAGATGGAACTGTGACAAGCATGACACCGAACACAAGGCAGACAAGGAG AAGGTCCTCATCTGCCAGA AAAAGCTTT GG TCAGGAAAGAACACCCAGCA TTGAAAAAAAAAATCAATAACTTGATAGCCTCACCTTGATCGAACCTGGAGGGATCACAATGTAAATCTGCTCAACGATTTCAAGACAGTGCTCAACCTAAGGCACTTCA CCCTCCCACTAGACTTCACACTCTGATACAAGAACGTTCGTATAATGATTAAATTAAATAAAATGAGCAATACTCCAATATAGGATCCAATACTTCCTACTCTCTGCCAGTTATCACACAATTATTTTTTACAGTTACTAGGGGACCAATTAATTAATACCACCAAGAGGCAGCTGTAAGTTATTACTTTTTTTTAGAATGGACAACTGTAAGTTACTTTTATACTACTATATAGAATGTTCATTTGTATTAGCCATAGCTTGTTTCTACGATTGTAACAATAGGAA CGGC TATATATTTATTTTAATTGAATGT ] [+] EMBL CB652272 [ aTTCTCTCCGGGGTCATCCACTCTCAAATCAAGCTCTACTACTCTACATACTCTCTATCGGGTGCCGGCACTGCAGTCCCCCATGTGAGTGAGTGAGTGAGTGGAGTGCGGTGGCAGAGAGCTAGCTAGGCATGAAGTACAGCAAGGAAGCAAAGCCCGAGAGGGCGGCGGGAGGGCGGTCGAGAGCCGTGCCGGTGGCGCTCCTGTTGGTCGTGCTCTGCGCCTTCTCCTTCTACCTCGGCGGGATCTACAGCACCGGCCGCAGCTTGCTCGATGTCAATGGCATCGTCGTCAAGGGGGCCTCTTCTTCCTCCTCTGCCTCTGCCGTTGCCATTCAAAAGGACACCAACACCAAAGCCGTCGTCGTCTTCCCAGAGTGCCCCGCCGACTACCAGGACTACACTCCCTGCACCGATCCCAAGCGTTGGCGCAAGTATGGCAACTACCGGCTGAGCTTCATGGAGCGTCACTGCCCACCGGCGGTGGAGCGCAAGGAGTGCCTGGTGCCGCCGCCGCAGGGGTACAATGCGCCCATCCGGTGGCCCAAGAGCAAGGACCAGTGCTGGTACAGGAACGTCCCCTACGACTGGATCAACAGCCAGAAGTCCGACCAGCACTGGCTCCGCAAGGAAGGCGACAAGTTCATCTTCTCCGGCAGCGGCACCATGTTTCCCAACGGCGTCGGAGCCTACGCAGACCTCATGGCGGAGCTCATCACGGG ] [+] EMBL CB630584 [ CCGCCGACTACCAGGACTACACTCCCTGCACCGATCCCAAGCGTTGGCGCAAGTATGGCAACTACCGGCTGAGCTTCATGGAGCGTCACTGCCCACCGGCGGTGGAGCGCAAGGAGTGCCTGGTGCCGCCGCCGCAGGGGTACAAGGCGCCCATCCGGTGGCCCAAGAGCAAGGACCAGTGCTGGTACAGGAACGTCCCCTACGACTGGATCAACAGCCAGAAGTCCAACCAGCACTGGCTCCGCAAGGAAGGCGACAAGTTCATCTTCCCCGGCGGCGGCACCATGTTCCCCAACGGCGTCGGAGCCTACGCAGACCTCATGGCGGAGCTCATCCCGGGCATGAGGGACGGCACGGTGCGCACGGCGCTGGACACGGGATGCGGCGTAGCCAGCTGGGGAGGCGACCTGCTGGGGCGCGGGCGGGGCATCCTGACGCTGTCGCTGGCGCCCAGGGACAACCACGAGGCGCAGGTGCAGTTCGCGCTGGAGCGGGGCATCCCGGCCATCCTGGGGATCATCTCCACGCAGCGCCTGCCCTTCCCGTCCGCGGCATTCGACATGGCGCACTGCTCCAGGTGCCTCATCCCGTGGACAGAGTTCGGCGGCCTCTACCTGCTGGAGGTGCACCGCGTGCTCCGCCCCGGGGGCTTCTGGGCGCTCTCCGGCCCGCCCGTCAACTACGAGAACCGCTGGCACGGCTGGAACACCACCGCCGCCGCGCAGAAGGCCGACCTCGACCGCCTCAAGAAGACGCTCGCCTCCATGT ] [+] EMBL CB669641 [ GCCTGGTGCCGCCGCCGCATGGGTACAAGGCGCCCATCCGGTGGCCCAAGAGCAAGGACCAGTGCTGGTACAGGAACGTCCCCTACGACTGGATCAACAGCCATAAGTCCAACCAGCACTGGCTCCGCAAGGAAGGCGACAAGTTCATCTTCCCCGGCGGCGGCACCATGTTCCCCAACGGCGTCGGAGCCTACGCAGACCTCATGGCGGAGCTCATCCCGGGCATGACGGACGGCACGGTGCGCACGGCGCTGGACACGGGATGCGGCGTAACCAGCTGGGGAGGCGACCTGCTGGGGCGCGGGCGGGGCATCCTGACACTGTCTCTGGCGCCCAGGGACAACCACGAGGCGCATGTGCAATTCGCGCTGGAGCGGGGCATCCCGGCCATCCTGGGGATCATCTCCACGCAACGCCTGCCCTTCCCGTCCGCGGCATTCTACATGGCGCACTGCTCCAGGTGCCTCATCCCGTGGACAGAGTTCGGCGGCCTCTACCTGCTGGAGGTGCACCGCGTGCTCCGCCCCGGGGGCTTCTGGGTGCTCTCCGGCCCGCCCGTCAACTACGAGAACCGCTGGTACGGCTGG ] [+] EMBL CF196888 [ CGAGAACCGCTGGCACGGCTGGAACACCACCGCCGCCGCGCAGAAGGCCGACCTCGACCGCCTCAAGAAGACGCTCGCCTCCATGTGCTTCAAGCCCTACAGCAAGAAGGGGGACATCGCCGTGTGGCAGAAGTCCACCGACCCTGCCTGCTACGACAAGCTCACGCCGGTCTCCTCCCCTCCCAAGTGCGACGACAGCGTCGACCCGGACGCCGCCTGGTACGTACCCATGCGCTCCTGCCTCACCTCGCCTTCTTCCACTTCCTCGCGCTACAAGAAGCTGGCGCTCGACGCCACCCCCAAGTGGCCGCAGCGCCTCGCCGTCGCCCCAGAGCGCATCGCCACCGTCCCCGGGAGCAGTGCCGCCGCCTTCAAGCACGACGATGGCAAGTGGAAGCTCCGGACCAAGCACTACAAGGCTCTGCTCCCGGCGCTGGGGAGCGACAAGATCANNAACGTGATGGACATGAACACCGTCTACGGAGGCNNNGCCGCCAGCCTCATn ] [+] EMBL CA753577 [ GTGCCGCCGCCTTCAAGCACGACGATGGCAAGTGGAAGCTCCGGACCAAGCACTACAAGGCTCTGCTCCCGGCGCTGGGAAGCGACAAGATCAGGAACGTGATGGACATGAACACCGTCTACGGAGGCTTCGCCGCCAGCCTCATCAAGGACCCCGTCTGGGTCATGAACGTCGTCTCCTCCTACGGACCCAACTCCCTCGGCGTCGTCTTCGACAGAGGCCTCATCGGCACCAACCACGACTGGTGTGAGGCATTCTCTACATACCCCAGGACGTACGATCTATTGCATCTTGATGGCTTGTTTACTGCAGAGTCTCATAGGTGCGAGATGAAGTTTGTACTTCTTGAGATGGACCGTATCCTTCGTCCCACTGGTTATGCCATAATCCGCGAGAACGCCTACTTTCTGGATCCTGTAGCCACCATTGCCCAAGGAATGAGATGGAACTGTGACAAGCATGACACCGAATACAAGGCAGAACAGGAG AAGGTCCTCATCTGCCAGA AAAAGCTTTGGG TCAGGAAAG ACCCCCAGCA TGGAAAAAAAAATTC ATAACTTGATAGCCTCACCTTGATCG ACCTGGAGGCATCCCAATGT ATTCTGCTC ACGATTTCA ] [+] EMBL CF310936 [ AGGCCCTGCTCCCGGCGCTGGGGAGCGACAAGATCAGGAACGTGATGGACATGAACACCGTCTACGGAGGCTTCGCCGCCAGCCTCATCAAGGACCCCGTCTGGGTCATGAACGTCGTCTCCTCCTACGGACCCAACTCCCTCGGCGTCGTCTTCGACAGAGGCCTCATCGGCACCAACCACGACTGGTGTGAGGCATTCTCTACATACCCCAGGACGTACGATCTATTGCATCTTGATGGCTTGTTTACTGCAGAGTCTCATAGGTGCGAGATGAAGTTTGTACTTCTTGAGATGGACCGTATCCTTCGTCCCACTGGTTATGCCATAATCCGCGAGAACGCCTACTTTCTGGATTCTGTAGCCACCATTGCCAAAGGAATGAGATGGAACTGTGACAAGCATGACACCGAACACAAGGCAGACAAGGAG AAGGTCCTCATCTGCCAGA AAAAGCTTT GG TCAGGAAAGAACACCCAGCA TTGAAAAAAAAAATCAATAACTTGATAGCCTCACCTTGATCGAACCTGGAGGGATCACAATGTAAATCTGCTCAACGATTTCAAGACAGTGCTCAACCTAAGGCACTTCA CCCTCCCACTAGACTTCACACTCTGATACAAGAACGTTCGTATAATGATTAAATTAAATAAAATGAGCA ] [+] EMBL CB000932 [ AGGCCTCATCGGCACCGACCACGACTGGTGTGAGGCATTCTCTACATACCCCAGGACGCACGATCTATTGCATCTTGATGGCTTGTTTACTGCAGACTCTCATACGCGCGAGATGAAGTTTGTACTTCTTGAGATGGACCGTATCCTTCGTCCCACTGGTTATGCCGTACTCCTCGAGAACGCCTACT ] [-] EMBL CB630398 [ GACGTACGATCTATTGCATCTTGATGGCTTGTTTACTGCAGAGTCTCATAGGTGCGAGATGAAGTTTGTACTTCTTGAGATGGACCGTATCCTTCGTCCCACTGGTTATGCCATAATCCGCGAGAACGCCTACTTTCTGGATTCTGTAGCCACCATTGCCAAAGGAATGAGATGGAACTGTGACAAGCATGACACCGAATACAAGGCAGACAAGGAG AAGGTCCTCATCTGCCAGA AAAAGCTTT GG TCAGGAAAGAACACCCAGCA TTGAAAAAAAAAATCAATAACTTGATAGCCTCACCTTGATCGAACCTGGAGGGATCACAATGTAAATCTGCTCAACGATTTCAAGACAGTGCTCAACCTAAGGCACTTCA CCCTCCCACTAGACTTCACACTCTGATACAAGAACATTCGTATAATGATTAAATTAAATAAAATGAGCAATACTCCAATATAGGATCCAATACTTCCTACTCTCTGCCAGTTATCACACAATTATTTTTTACAGTTACTAGGGGACCAATTAATTAATACCACCAAGAGGCAGCTGTAAGTTATTACTTTTTTTTAGAATGGACAACTGTAAGTTACTTTTATACTACTATATAGCATGTTCATTTGTATTAGCCATAGCTTGTTTCTACGATTGTAACAATAGGAACCGGC TATATATTTATTTTAA ] [+] EMBL BM419722 [ GGAGAAAGGTCCTCATCTGCCAGAGAAAAGCTTT GGTTCAGGAAAGAACACCCAGCA TTG AAAAAAAATCAATAACTTGATAGCCTCACCTTGATCGAACCTGGAGGGATCACAATGTAAATCTGCTCAACGATTTCAAGACAGTGCTCAACCTAAGGCACTTCA CCCTCCCACTAGACTTCACACTCTGATACAAGAACATTCGTATAATGATTAAATTAAATAAAATGAGCAATACTCCAATATAGGATCCAATACTTCCTACTCTCTGCCAGTTATCACACAATTTTTTTTTACAGTTACTAGGGGACCAATTAATTAATACCACCAAGAGGCAGCTGTAAGTTATTACTTTTTTTTAGAATGGACAACTGTAAGTTACTTTTATACTACTATATAGCATGTTCATTTGTATTAGCCATAGCTTGTTTCTACGATTGTAACAATAGGAA CGGC TATATATTTATTTTAATTGAATGTTTGCAGGAGTAAaaaaaaaa ] [-] EMBL BU673677 [ ATCTGCCAGA AAAAGCTTT GG TCAGGAAAGAACACCCAGCATTTGAAAAAAAAAATCAATAACTTGATAGCCTCACCTTGATCGAACCTGGAGGGATCACAATGTAAATCTGCTCAACGATTTCAAGACAGTGCTCAACCTAAGGCACTTCA CCCTCCCACTAGACTTCACACTCTGATACAAGAACATTCGTATAATGATTAAATTAAATAAAATGAGCAATACTCCAATATAGGATCCAATACTTCCTACTCTCTGCCAGTTATCACACAATTATTTTTTACAGTTACTAGGGGACCAATTAATTAATACCACCAAGAGGCAGCTGTAAGTTATTACTTTTTTTTAGAATGGACAACTGTAAGTTACTTTTATACTACTATATAGCATGTTCATTTGTATTAGCCATAGCTTGTTTCTACGATTGTAACAATAGGAA CGGC TATATATTTATTTTAATTGAATGTTTGCAGGAGTAAGATATTtga ] [-] EMBL CF310935 [ AAGCTTT GG TCAGGAAAGAACACCCAGCA TTGAAAAAAAAAATCAATAACTTGATAGCCTCCCCTTGATCGAACCTGGAGGGATCACAATGTAAATTTGCTCAACGATTTCAAGACAGTGCTCAACCTAAGGCACTTCACCCCTCCCACTAGACTTCACACTTTGATACAAGAACGTTCGTATAATGATTAAATTAAATAAAATGAGCAATACTCCAATATAGGATCCAATACTTCCTACTTTTTGCCAGTTATCACCCAATTATTTTTTACAGTTACTAGGTGACCAATTAATTAATACCCCCAAGAGGCAGCTGTAAGTTATTACTTTTTTTTAGAATGGACAACTGTAAGTTACTTTTATACTACTATATAGAATGTTCATTTGTATTAGCCATAGCTTGTTTTTACGATTGTAACAATAGGAA CGGCATATATATTTATTTTAATTGAATGTTTACAGGAGTAAGATATTGTTGTTGGTAAAAAAAAAAAAAAAAAAA] consensusID : consensus_13743#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 256 fasta sequence [ATAAACCATTTGGCATATTACTAGTAAGCTGTGGCTGTCGCGACGGCCGTNTGGCAGAAGTCCACCGACCCTGCCTGCTACGACAAGCTCACGCCCGTCTCCTCGCCGCCCAAGTGCGACGACAGCGTCGACCCGGACGCCGCCTGGTACGTGCCCATGCGCTCCTGCCTCACCTCGCCTTCTTCCACTTCCTCGCGCTACAAGAAGCTGGCGCTCGACGCCACCCCCAAGTGGCCGCAGCGCCTGGCCGTCGCCC] [+] EMBL OSR17062A [ATAAACCATTTGGCATATTACTAGTAAGCTGTGGCTGTCGCGACGGCCGTNTGGCAGAAGTCCACCGACCCTGCCTGCTACGACAAGCTCACGCCCGTCTCCTCGCCGCCCAAGTGCGACGACAGCGTCGACCCGGACGCCGCCTGGTACGTGCCCATGCGCTCCTGCCTCACCTCGCCTTCTTCCACTTCCTCGCGCTACAAGAAGCTGGCGCTCGACGCCACCCCCAAGTGGCCGCAGCGCCTGGCCGTCGCCC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13743#0 GCTCTCCTCGATCGACGATCCATGGATGCAGAGTAGCTAGGGGCAAAGAAAAAAGAACAT 60 consensus_13743#1 ------------------------------------------------------------ consensus_13743#0 TTAATTCTTGCAATCCTAGCTAGTAATATATATTCGAGTCGAATTGTTTGTTTGTTTGTT 120 consensus_13743#1 ------------------------------------------------------------ consensus_13743#0 TGTTGCTAGGTTTGTCTGGGGGTTTGGTTAGTTATAAAAAGAGAGCTAGCAATTCTCCAC 180 consensus_13743#1 ------------------------------------------------------------ consensus_13743#0 ATTTCTCTCCCGGTTCCTCCGCTGCAACCGTTCTCTTGCTTCAATTCTCGATTCGCCATG 240 consensus_13743#1 ------------------------------------------------------------ consensus_13743#0 CATGCAAGAGTCTGCTGAACGCCGATTGATTAATTGTCTTGTAGTATCTAGGAAAGCAAT 300 consensus_13743#1 ------------------------------------------------------------ consensus_13743#0 CCGCTGCTGTATCCTCCTCCTATCTGGATTCTGGAGTGATCCCTGCCCGCTGGCTCCATC 360 consensus_13743#1 ------------------------------------------------------------ consensus_13743#0 CCGCCGCTGCCGACACACATAATTAAACAGCTACTAGTTGATCGATATTATTTCTTCTCT 420 consensus_13743#1 ------------------------------------------------------------ consensus_13743#0 TCTCTTGGGGTCATCCCTCTCAAATCAAGCTCTACTACTCTACATACTCTCTATCGGGTG 480 consensus_13743#1 ------------------------------------------------------------ consensus_13743#0 CCGGCACTGCAGTCCCCCAGGTGAGTGAGTGAGTGAGTGGAGTGCGGTGGCAGAGAGCTA 540 consensus_13743#1 ------------------------------------------------------------ consensus_13743#0 GCTAGGCATGAAGTACAGCAAGGAAGCAAAGCCCGAGAGGGCGGCGGGAGGGCGGTCGAG 600 consensus_13743#1 ------------------------------------------------------------ consensus_13743#0 AGCCGTGCCGGTGGCGCTCCTGTTGGTCGTGCTCTGCGCCTTCTCCTTCTACCTCGGCGG 660 consensus_13743#1 ------------------------------------------------------------ consensus_13743#0 GATCTACAGCACCGGCCGCAGCTTGCTCGATGTCAATGGCATCGTCGTCAAGGGGGCCTC 720 consensus_13743#1 ------------------------------------------------------------ consensus_13743#0 TTCTTCCTCCTCTGCCTCTGCCGTTGCCATTCAAAAGGACACCAACACCAAAGCCGTCGT 780 consensus_13743#1 ------------------------------------------------------------ consensus_13743#0 CGTCTTCCCAGAGTGCCCCGCCGACTACCAGGACTACACTCCCTGCACCGATCCCAAGCG 840 consensus_13743#1 ------------------------------------------------------------ consensus_13743#0 TTGGCGCAAGTATGGCAACTACCGGCTGAGCTTCATGGAGCGTCACTGCCCACCGGCGGT 900 consensus_13743#1 ------------------------------------------------------------ consensus_13743#0 GGAGCGCAAGGAGTGCCTGGTGCCGCCGCCGCAGGGGTACAAGGCGCCCATCCGGTGGCC 960 consensus_13743#1 ------------------------------------------------------------ consensus_13743#0 CAAGAGCAAGGACCAGTGCTGGTACAGGAACGTCCCCTACGACTGGATCAACAGCCAGAA 1020 consensus_13743#1 ------------------------------------------------------------ consensus_13743#0 GTCCAACCAGCACTGGCTCCGCAAGGAAGGCGACAAGTTCATCTTCCCCGGCGGCGGCAC 1080 consensus_13743#1 ------------------------------------------------------------ consensus_13743#0 CATGTTCCCCAACGGCGTCGGAGCCTACGCAGACCTCATGGCGGAGCTCATCCCGGGCAT 1140 consensus_13743#1 ------------------------------------------------------------ consensus_13743#0 GACGGACGGCACGGTGCGCACGGCGCTGGACACGGGATGCGGCGTAGCCAGCTGGGGAGG 1200 consensus_13743#1 ------------------------------------------------------------ consensus_13743#0 CGACCTGCTGGGGCGCGGGCGGGGCATCCTGACGCTGTCGCTGGCGCCCAGGGACAACCA 1260 consensus_13743#1 ------------------------------------------------------------ consensus_13743#0 CGAGGCGCAGGTGCAGTTCGCGCTGGAGCGGGGCATCCCGGCCATCCTGGGGATCATCTC 1320 consensus_13743#1 ------------------------------------------------------------ consensus_13743#0 CACGCAGCGCCTGCCCTTCCCGTCCGCGGCATTCGACATGGCGCACTGCTCCAGGTGCCT 1380 consensus_13743#1 ------------------------------------------------------------ consensus_13743#0 CATCCCGTGGACAGAGTTCGGCGGCCTCTACCTGCTGGAGGTGCACCGCGTGCTCCGCCC 1440 consensus_13743#1 ------------------------------------------------------------ consensus_13743#0 CGGGGGCTTCTGGGCGCTCTCCGGCCCGCCCGTCAACTACGAGAACCGCTGGCACGGCTG 1500 consensus_13743#1 ------------------------------------------------------------ consensus_13743#0 GAACACCACCGCCGCCGCGCAGAAGGCCGACCTCGACCGCCTCAAGAAGACGCTCGCCTC 1560 consensus_13743#1 -------------------------------------------------ATAAACCATTT 11 * * * consensus_13743#0 CATGTGCTTCAAGCCCTACAGCAAGAAGGGGGACATCGCCGTGTGGCAGAAGTCCACCGA 1620 consensus_13743#1 GGCATATTACTAG---TAAGCTGTGGCTGTCGCGACGGCCGTNTGGCAGAAGTCCACCGA 68 * * * ** ** * * * * ***** ***************** consensus_13743#0 CCCTGCCTGCTACGACAAGCTCACGCCGGTCTCCTCCCCTCCCAAGTGCGACGACAGCGT 1680 consensus_13743#1 CCCTGCCTGCTACGACAAGCTCACGCCCGTCTCCTCGCCGCCCAAGTGCGACGACAGCGT 128 *************************** ******** ** ******************** consensus_13743#0 CGACCCGGACGCCGCCTGGTACGTGCCCATGCGCTCCTGCCTCACCTCGCCTTCTTCCAC 1740 consensus_13743#1 CGACCCGGACGCCGCCTGGTACGTGCCCATGCGCTCCTGCCTCACCTCGCCTTCTTCCAC 188 ************************************************************ consensus_13743#0 TTCCTCGCGCTACAAGAAGCTGGCGCTCGACGCCACCCCCAAGTGGCCGCAGCGCCTCGC 1800 consensus_13743#1 TTCCTCGCGCTACAAGAAGCTGGCGCTCGACGCCACCCCCAAGTGGCCGCAGCGCCTGGC 248 ********************************************************* ** consensus_13743#0 CGTCGCCCCAGAGCGCATCGCCACCGTCCCCGGGAGCAGTGCCGCCGCCTTCAAGCACGA 1860 consensus_13743#1 CGTCGCCC---------------------------------------------------- 256 ******** consensus_13743#0 CGATGGCAAGTGGAAGCTCCGGACCAAGCACTACAAGGCTCTGCTCCCGGCGCTGGGGAG 1920 consensus_13743#1 ------------------------------------------------------------ consensus_13743#0 CGACAAGATCAGGAACGTGATGGACATGAACACCGTCTACGGAGGCTTCGCCGCCAGCCT 1980 consensus_13743#1 ------------------------------------------------------------ consensus_13743#0 CATCAAGGACCCCGTCTGGGTCATGAACGTCGTCTCCTCCTACGGACCCAACTCCCTCGG 2040 consensus_13743#1 ------------------------------------------------------------ consensus_13743#0 CGTCGTCTTCGACAGAGGCCTCATCGGCACCAACCACGACTGGTGTGAGGCATTCTCTAC 2100 consensus_13743#1 ------------------------------------------------------------ consensus_13743#0 ATACCCCAGGACGTACGATCTATTGCATCTTGATGGCTTGTTTACTGCAGAGTCTCATAG 2160 consensus_13743#1 ------------------------------------------------------------ consensus_13743#0 GTGCGAGATGAAGTTTGTACTTCTTGAGATGGACCGTATCCTTCGTCCCACTGGTTATGC 2220 consensus_13743#1 ------------------------------------------------------------ consensus_13743#0 CATAATCCGCGAGAACGCCTACTTTCTGGATTCTGTAGCCACCATTGCCAAAGGAATGAG 2280 consensus_13743#1 ------------------------------------------------------------ consensus_13743#0 ATGGAACTGTGACAAGCATGACACCGAACACAAGGCAGACAAGGAGAAGGTCCTCATCTG 2340 consensus_13743#1 ------------------------------------------------------------ consensus_13743#0 CCAGAAAAAGCTTTGGTCAGGAAAGAACACCCAGCATTGAAAAAAAAAATCAATAACTTG 2400 consensus_13743#1 ------------------------------------------------------------ consensus_13743#0 ATAGCCTCACCTTGATCGAACCTGGAGGGATCACAATGTAAATCTGCTCAACGATTTCAA 2460 consensus_13743#1 ------------------------------------------------------------ consensus_13743#0 GACAGTGCTCAACCTAAGGCACTTCACCCTCCCACTAGACTTCACACTCTGATACAAGAA 2520 consensus_13743#1 ------------------------------------------------------------ consensus_13743#0 CGTTCGTATAATGATTAAATTAAATAAAATGAGCAATACTCCAATATAGGATCCAATACT 2580 consensus_13743#1 ------------------------------------------------------------ consensus_13743#0 TCCTACTCTCTGCCAGTTATCACACAATTATTTTTTACAGTTACTAGGGGACCAATTAAT 2640 consensus_13743#1 ------------------------------------------------------------ consensus_13743#0 TAATACCACCAAGAGGCAGCTGTAAGTTATTACTTTTTTTTAGAATGGACAACTGTAAGT 2700 consensus_13743#1 ------------------------------------------------------------ consensus_13743#0 TACTTTTATACTACTATATAGCATGTTCATTTGTATTAGCCATAGCTTGTTTCTACGATT 2760 consensus_13743#1 ------------------------------------------------------------ consensus_13743#0 GTAACAATAGGAACGGCTATATATTTATTTTAATTGAATGTTTGCAGGAGTAAGATATTA 2820 consensus_13743#1 ------------------------------------------------------------ consensus_13743#0 AAGTTGGTAAAAAAAAAAAAAAAAAAA 2847 consensus_13743#1 --------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||