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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13821#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1427 fasta sequence
[ACTTGAACCTTCCTCCAAGGCCTCCTGGTTATGCTTTTGTTGAGTTTGAAGACCCTCGTGATGCACAAGATGCAATTTATGGCCGTCATGGATATGACTTTGATGGCCACAGGTTGCGGGTGGAGTTAGCTCATGGTGGCAGAGGCCCTTCTTTTGATCGATCAAGTAGCTATAGCAGTGCTGGGCGCCGTGGTGCCGCTAAACGTACTGATTACCGAGTTATGGTTACTGGATTACCTTCGTCAGCATCATGGCAAGACCTCAAGGATCATATGAGGCGAGCTGGTGATGTCTGTTTCTCTGATGTTTACCGTGAGGGTGGAGCAACTATTGGAATTGTTGATTATACCAACTATGAGGATATGAAACAAGCGATAAGAAAGCTTGATGACTCAGAGTTCCGTAATGCATTTTCACGGGCATATATCAGGGTGAGGGAGTATGATTCTGCTAAGCGCAGCCGCTCTCGTTCCAGAGGTAGAAGCCACAGCCGCTCTATCTCCAGAAGCAGAAGCCGCAGCCGCTCGATCTCCAGAAGCAGAAGCCGCAGTTATAGCAGAAGCAGGAGTCCAAGATCTAGGTCTGCTTCTCGGTCTCACTCACCTGTGAAAGAAAGATCTAGGTCGGCTTCACAGTCTCGCTCACCTGTGAAGGAAAGATTTGGGACATGCAGCTATTTGGGTTGCGTTGGTAGGATATTGGATGCGTTGAGAACCAAAGGATGGTTTGGAACGTTGGATAGTTCTGCTGGCTAGTGACATACTGTATGACAAGTGGACTACAACCAGCGATAGGAGCAAGATAGGGCTGGCTCTAAACATATTTGGACTTATGGAGTGCATTTCGTGATCACCATCAAGATCCCCACCCCCTGCTACTTCTCCTCCTCGTGAAAAGTCAGCAAGCAAGAGCCCTGTCAAGAGCAGAAGTTTATCCCGATCCCCATCTCCTGTGAAATCTGAGTGAAGATGGATGCACTTGAAGCCTGCCAGAAACTATTTCATGATTTGTGGAGCTGAGTTTCGGAAGGCAGTAGATTGTGGATTATGGTTTATCTGTTTCTGCGTTACCATTGTTGTTACTTTTCAGAAGAGAGCCGTGTTATTTCACTGTTGCTTGGTCATGTCGTAATATCTGTCAGAAACATTGCCTTACATGCTTAGCGTTTTACTTGCCATCACCAATCTATCAGACCTCGTAGCACATGGTGCTCGAACTTCATGCTATACATACAGCACTATGAACTCTGCTATATTCTAAAGCTCAACTATCTGTAGTAACTGCAGGAAGCCTTTGCGCTTCAATTATTGTCTTTTTACTCTAGTTTTTTAGAGCTTGTGCTTGTGTACTTGTATGCACCTGTTATGTTGTAATTCTACAGAGTGGTTTTCCTCGCTTAATTGTTGACATGTTTTGTCGTTCGGTGT]
[+] EMBL CB653594 [ACTTGAACCTTCCTCCAAGGCCTCCTGGTTATGCTTTTGTTGAGTTTGAAGACCCTCGTGATGCACAAGATGCAATTTATGGCCGTCATGGATATGACTTTGATGGCCACAGGTTGCGGGTGGAGTTAGCTCATGGTGGCAGAGGCCCTTCTTTTGATCGATCAAGTAGCTATAGCAGTGCTGGGCGCCGTGGTGCCGCTAAACGTACTGATTACCGAGTTATGGTTACTGGATTACCTTCGTCAGCATCATGGCAAGACCTCAAGGATCATATGAGGCGAGCTGGTGATGTCTGTTTCTCTGATGTTTACCGTGAGGGTGGAGCAACTATTGGAATTGTTGATTATACCAACTATGAGGATATGAAACAAGCGATAAGAAAGCTTGATGACTCAGAGTTCCGTAATGCATTTTCACGGGCATATATCAGGGTGAGGGAGTATGATTCTGCTAAGCGCAGCCGCTCTCGTTCCAGAGGTAGAAGCCACAGCCGCTCTATCTCCAGAAGCAGAAGCCGCAGCCGCTCGATCTCCAGAAGCAGAAGCCGCAGTTATAGCAGAAGCAGGAGTCCAAGATCTAGGTCTGCTTCTCGGTCTCACTCACCTGTGAAAGAAAGATCTAGGTCGGCTTCACAGTCTCGCTCACCTGTGAAGGAAAGATTTGGGACATGCAGCTATTTGGGTTGCGTTGGTAGG ]
[-] EMBL CB653595 [ AAGCCGCAGTTATAGCAGAAGCAGGAGTCCAAGATCTAGGTCTGCTTCTCGGTCTCACTCACCTGTGAAAGAAAGATCTAGGTCGGCTTCACAGTCTCGCTCACCTGTGAAGGAAAGATTTGGGACATGCAGCTATTTGGGTTGCGTTGGTAGGATATTGGATGCGTTGAGAACCAAAGGATGGTTTGGAACGTTGGATAGTTCTGCTGGCTAGTGACATACTGTATGACAAGTGGACTACAACCAGCGATAGGAGCAAGATAGGGCTGGCTCTAAACATATTTGGACTTATGGAGTGCATTTCGTGATCACCATCAAGATCCCCACCCCCTGCTACTTCTCCTCCTCGTGAAAAGTCAGCAAGCAAGAGCCCTGTCAAGAGCAGAAGTTTATCCCGATCCCCATCTCCTGTGAAATCTGAGTGAAGATGGATGCACTTGAAGCCTGCCAGAAACTATTTCATGATTTGTGGAGCTGAGTTTCGGAAGGCAGTAGATTGTGGATTATGGTTTATCTGTTTCTGCGTTACCATTGTTGTTACTTTTCAGAAGAGAGCCGTGTTATTTCACTGTTGCTTGGTCATGTCGTAATATCTGTCAGAAACATTGCCTTACATGCTTAGCGTTTTACTTGCCATCACCAATCTATCAGACCTCGTAGCACATGGTGCTCGAACTTCATGCTATACATACAGCACTATGAACTCTGCTATATTCTAAAGCTCAACTATCTGTAGTAACTGCAGGAAGCCTTTGCGCTTCAATTATTGTCTTTTTACTCTAGTT ]
[-] EMBL CB647285 [ GTTGAGAACCAAAGGATGGTTTGGAACGTTGGATAGTTCTGCTGGCTAGTGACATACTGTATGACAAGTGGACTACAACCAGCGATAGGAGCAAGATAGGGCTGGCTCTAAACATATTTGGACTTATGGAGTGCATTTCGTGATCACCATCAAGATCCCCACCCCCTGCTACTTCTCCTCCTCGTGAAAAGTCAGCAAGCAAGAGCCCTGTCAAGAGCAGAAGTTTATCCCGATCCCCATCTCCTGTGAAATCTGAGTGAAGATGGATGCACTTGAAGCCTGCCAGAAACTATTTCATGATTTGTGGAGCTGAGTTTCGGAAGGCAGTAGATTGTGGATTATGGTTTATCTGTTTCTGCGTTACCATTGTTGTTACTTTTCAGAAGAGAGCCGTGTTATTTCACTGTTGCTTGGTCATGTCGTAATATCTGTCAGAAACATTGCCTTACATGCTTAGCGTTTTACTTGCCATCACCAATCTATCAGACCTCGTAGCACATGGTGCTCGAACTTCATGCTATACATACAGCACTATGAACTCTGCTATATTCTAAAGCTCAACTATCTGTAGTAACTGCAGGAAGCCTTTGCGCTTCAATTATTGTCTTTTTACTCTAGTTTTTTAGAGCTTGTGCTTGTGTACTTGTATGCACCTGTTATGTTGTAATTCTACAGAGTGGTTTTCCTCGCTTAATTGTTGACATGTTTTGTCGTTCGGTGT]
[-] EMBL CB647309 [ TTGGACTTATGGAGTGCATTTCGTGATCACCATCAAGATCCCCACCCCCTGGTAGTTCTCCTCCTCGTGAAAAGTCAGCAAGCAAGAGCCCTGTCAAGAGCAGAAGTTTATCCCGATCCCCATCTCCTGTGAAATCTGAGTGAAGATGGATGCACTTGAAGCCTGCCAGAAACTATTTCATGATTTGTGGAGCTGAGTTTCGGAAGGCAGTAGATTGTGGATTATGGTTTATCTGTTTCTGCGTTACCATTGTTGTTACTTTTCAGAAGAGAGCCGTGTTATTTCACTGTTGCTTGGTCATGTCGTAATATCTGTCAGAAACATTGCCTTACATGCTTAGCGTTTTACTTGCCATCACCAATCTATCAGACCTCGTAGCACATGGTGCTCGAACTTCATGCTATACATACAGCACTATGAACTCTGCTATATTCTAAAGCTCAACTATCTGTAGTAACTGCAGGAAGCCTTTGCGCTTCAATTATTGTCTTTTTACTGTAGTTTTTTAGAGCTTGTGCTTGTGTACTTGTATGCACCTGTTATGTTGTAATTCTACAGAGTGGTTTTCCTCGCTTAATTGTTGACATGTTTTGTCGTTCGGTGT]
[+] EMBL AU081252 [ AAGATCCCNACCCCCTGCTNCTTCTCCTCCTCGTGAAAAGTCAGCAAGCAAGAGCCCTGTCAAGAGCAGAAGTTTATCCCGATCCCCATCTCCTGTGAAATCTGNGTGAAGATGGATGCACTTGAAGCCTGCCAGAAACTATTTCATGATTTGTGGAGCTGAGTTTCGGAAGGCAGTAGATTGTGGATTATGGTTTATCTGTTTCTGCGTTACCATTGTTGTTACTTTTCAGAAGAGAGCCGTGTTATTTCACTGTTGNTTGGTCATGTCGTAATATCTNTCAGAAACATTGCCTTACATGCTTAGCGTTTTACTTGCCATCACCAATCTATCAGACCTCGTAGCACATGGTGCTCGAACTTCATGCTATACATACAGCACTATGAACTCTGCTAaaaaaaaaa ]
consensusID : consensus_13821#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1405 fasta sequence
[CTTCTCGAGCCCNCCTCCTCCGCCGCCGCCGCCGCCGCCTCCGCCTCNCCGCCGG-GCAGAGTCGCAGGAACGATGAGCCGACGCAACANCCGCACCATCTATGTGGGCAATCTCCCCGGAGACATTCGCGAGAGGGAAGTGGAGGATCTCTTCTATAAGTATGGCCGTATTGTGGATATTGACTTGAAAATTCCTCCAAGGCCTCCTGGTTATGCTTTTGTTGAGTTTGAAGACCCTCGTGATGCACAAGATGCAATTTATGGCCGTCATGGATATGACTTTGATGGCCACAGGTTGCGGGTGGAGTTAGCTCATGGTGGCAGAGGCCCTTCTTTTGATCGATCAAGTAGCTATAGCAGTGCTGGGCGCCGTGGTGCCGCTAAACGTACTGATTACCGAGTTATGGTTACTGGATTACCTTCGTCAGCATCATGGCAAGACCTCAAGGATCATATGAGGCGAGCTGGTGATGTCTGTTTCTCTGATGTTTACCGTGAGGGTGGAGCAATGGAATTGTTGATTATACCAACTATGAGGATATGAAACAAGCGATAAGAAAGCTTGATGACTCAGAGTTCCGTAATGCATTTTCACGGGCATATATCAGGGTGAGGGAGTATGATTCTGCTAAGCGCAGCCGCTCTCGTTCCAGAGGTAGAAGCCACAGCCGCTCTATCTCTAGAAGCAGAAGCCGCAGCCGCTCGATCTCCAGAAGCAGAAGCCGCAGTTATAGCAGAAGCAGGAGTCCAAGATCTAGGTCTGCTTCTCGGTCTCACTCACCTGTGAAAGAAAGATCTAGGTCGGCTTCACAGTCTCGCTCACCTGTGAAGGAAAGATCACCATCAAGATCCCCACCCCCTGCTACTTCTCCTCCTCGTGAAAAGTCAGCAAGCAAGAGCCCTGTCAAGAGCAGAAGTTTATCCCGATCCCCATCTCCTGTGAAATCTGAGTGAAGATGGATGCACTTGAAGCCTGCCAGAAACTATTTCATGATTTGTGGAGCTGAGTTTCGGAAGGCAGTAGATTGTGGATTATGGTTTATCTGTTTCTGCGTTACCATTGTTGTTACTTTTCAGAAGAGAGCCGTGTTATTTCACTGTTGCTTGGTCATGTCGTAATATCTGTCAGAAACATTGCCTTACATGCTTAGCGTTTTACTTGCCATCACCAATCTATCAGACCTCGTAGCACATGGTGCTCGAACTTCATGCTATACATACAGCACTATGAACTCTGCTATATTCTAAAGCTCAACTATCTGTAGTAACTGCAGGAAGCTTTGCGCCTAATATTGCTTTTACTTAGTTTTAAAGCTGGCTTGGACTGCCGGCGGCGTCAAACAACTTTGTACCGAACTTAGGGGGCCCGTCCCATTGCATTGAGTGATTACCGCCCTGCGCGTTTC]
[+] EMBL AU081251 [CTTCTCGAGCCCNCCTCCTCCGCCGCCGCCGCCGCCGCCTCCGCCTCNCCGCCGG GCAGAGTCGCAGGAACGATGAGCCGACGCAACANCCGCACCATCTATGTGGGCAATCTCCCCGGAGACATTCGCGAGAGGGAAGTGGAGGATCTCTTCTATAAGTATGGCCGTATTGTGGATATTGACTTGAAAATTCCTCCAAGGCCTCCTGGTTATGCTTTTGTTGAGTTTGAAGACCCTCGTGATGCACAAGATGCAATTTATGGCCGTCATGGATATGACTTTGATGGCCACAGGTTGCGGGTGGAGTTAGCTCATGGTGGCAGAGGCCCTTCTTTTGATCGATCAAGTAGCTATAGCAGTGCTGGGCGCCGTGGTGCCGCTAAACGTACTGA ]
[+] EMBL AK071503 [ CGAGCCCTCCTCCTCCGCCGCCGCCGCCGCCGCCTCCGCCTCGCCGCCGGCGCAGAGTCGCAGGAACGATGAGCCGACGCAACAGCCGCACCATCTATGTGGGCAATCTCCCCGGAGACATTCGCGAGAGGGAAGTGGAGGATCTCTTCTATAAGTATGGCCGTATTGTGGATATTGACTTGAAAATTCCTCCAAGGCCTCCTGGTTATGCTTTTGTTGAGTTTGAAGACCCTCGTGATGCACAAGATGCAATTTATGGCCGTCATGGATATGACTTTGATGGCCACAGGTTGCGGGTGGAGTTAGCTCATGGTGGCAGAGGCCCTTCTTTTGATCGATCAAGTAGCTATAGCAGTGCTGGGCGCCGTGGTGCCGCTAAACGTACTGATTACCGAGTTATGGTTACTGGATTACCTTCGTCAGCATCATGGCAAGACCTCAAGGATCATATGAGGCGAGCTGGTGATGTCTGTTTCTCTGATGTTTACCGTGAGGGTGGAGCAATGGAATTGTTGATTATACCAACTATGAGGATATGAAACAAGCGATAAGAAAGCTTGATGACTCAGAGTTCCGTAATGCATTTTCACGGGCATATATCAGGGTGAGGGAGTATGATTCTGCTAAGCGCAGCCGCTCTCGTTCCAGAGGTAGAAGCCACAGCCGCTCTATCTCTAGAAGCAGAAGCCGCAGCCGCTCGATCTCCAGAAGCAGAAGCCGCAGTTATAGCAGAAGCAGGAGTCCAAGATCTAGGTCTGCTTCTCGGTCTCACTCACCTGTGAAAGAAAGATCTAGGTCGGCTTCACAGTCTCGCTCACCTGTGAAGGAAAGATCACCATCAAGATCCCCACCCCCTGCTACTTCTCCTCCTCGTGAAAAGTCAGCAAGCAAGAGCCCTGTCAAGAGCAGAAGTTTATCCCGATCCCCATCTCCTGTGAAATCTGAGTGAAGATGGATGCACTTGAAGCCTGCCAGAAACTATTTCATGATTTGTGGAGCTGAGTTTCGGAAGGCAGTAGATTGTGGATTATGGTTTATCTGTTTCTGCGTTACCATTGTTGTTACTTTTCAGAAGAGAGCCGTGTTATTTCACTGTTGCTTGGTCATGTCGTAATATCTGTCAGAAACATTGCCTTACATGCTTAGCGTTTTACTTGCCATCACCAATCTATCAGACCTCGTAGCACATGGTGCTCGAACTTCATGCTATACATACAGCACTATGAACTCTGCTATATTCTAAAGCTCAACTATCTGTAGTAACTGCAGGAAGC ]
[+] EMBL AW069989 [ CAGCCGCTCTATCTCCAGAAGCAGAAGCCGCATTCGCTCGATCTCCAGAAGCAGAAGCCGCAGTTATAGCAGAAGCAGGAGTCCAAGATCTAGGTCTGCTTCTCGGTCTCACTCACCTGTGAAAGAAAGATCTAGGTCGGCTTCACAGTCTCGCTCACCTGTGAAGGAGAGATCACCATCAAGATCCCCACCCCCTGCTACTTCTCCTCCTCGTGAAAAGTCAGCAAGCAAGAGCCCTGTCAAGAGCAGAAGTTTATCCCGATCCCCATCTCCTGTGAAATCTGAGTGAAGATGGATGCACTTGAAGCCTGCCAGAAACTATTTCATGATTTGTGGAGCTGAGTTTCGGAAGGCAGTAGATTGGGGATTATGGGTTATCTGTTTCTGCGTTACCATTGTTGTTACTTTTCAGAAGAGAACCGGGTTATTTCACTGTTGCTTGGTCATGTCGTAATATCTGTCAGAAACATTGGCTTACATGCTTAGCGTTTAAC TGCCATTCCCAATCTATCAGACCTCGTAGCACATGGTGCTCGAACTT ATGCTATACATACAGCACTTTTGACTCTGCT TATTCTAAAG TTAA TAT TTTAGT ACTGGAGGAGCCTTTGCGCCTAATATTGCTTTTACTTAGTTTTAAAGCTGGCTTGGACTGCCGGCGGCGTCAAACAACTTTGTACCGAACTTAGGGGGCCCGTCCCATTGCATTGAGTGATTACCGCCCTGCGCGTTTC]
consensusID : consensus_13821#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 714 fasta sequence
[GCCCTCCTCCTCCGCCGCCGCCGCCGCCGCCTCCGCCTCGCCGCCGGCGCAGAGTCGCAGGAACGATGAGCCGACGCAACAGCCGCACCATCTATGTGGGCAATCTCCCCGGAGACATTCGCGAGAGGGAAGTGGAGGATCTCTTCTATAAGTATGGCCGTATTGTGGATATTGACTTGAAAATTCCTCCAAGGCCTCCTGGTTATGCTTTTGTTGAGGGAAAGGAATAGGCAAATCTCTAAAATGGATAAGCTGGCAAGCACAGGTTTATAAACAGGAGTTAGGTATGGGTTGTGTGATTTGAACGATCAAGTAACGGATACAAGACATAGACCCCCTCCAGTTTGAAGACCCTCGTGATGCACAAGATGCAATTTATGGCCGTCATGGATATGACTTTGATGGCCACAGGTTGCGGGTGGAGTTAGCTCATGGTGGCAGAGGCCCTTCTTTTGATCGATCAAGTAGCTATAGCAGTGCTGGGCGCCGTGGTGCCGCTAAACGTACTGATTACCGAGTTATGGTTACTGGATTACCTTCGTCAGCATCATGGCAAGACCTCAAGGATCATATGAGGCGAGCTGGTGATGTCTGTTTCTCTGATGTTTACCGTGAGGGTGGAGCAACTATTGGAATTGTTGATTATACCAACTATGAGGATATGAAACAAGCGATAAGAAAGCTTGATGACTCAGAGTTCCGTAATGCATTTTC]
[+] EMBL CB647308 [GCCCTCCTCCTCCGCCGCCGCCGCCGCCGCCTCCGCCTCGCCGCCGGCGCAGAGTCGCAGGAACGATGAGCCGACGCAACAGCCGCACCATCTATGTGGGCAATCTCCCCGGAGACATTCGCGAGAGGGAAGTGGAGGATCTCTTCTATAAGTATGGCCGTATTGTGGATATTGACTTGAAAATTCCTCCAAGGCCTCCTGGTTATGCTTTTGTTGAGGGAAAGGAATAGGCAAATCTCTAAAATGGATAAGCTGGCAAGCACAGGTTTATAAACAGGAGTTAGGTATGGGTTGTGTGATTTGAACGATCAAGTAACGGATACAAGACATAGACCCCCTCCAGTTTGAAGACCCTCGTGATGCACAAGATGCAATTTATGGCCGTCATGGATATGACTTTGATGGCCACAGGTTGCGGGTGGAGTTAGCTCATGGTGGCAGAGGCCCTTCTTTTGATCGATCAAGTAGCTATAGCAGTGCTGGGCGCCGTGGTGCCGCTAAACGTACTGATTACCGAGTTATGGTTACTGGATTACCTTCGTCAGCATCATGGCAAGACCTCAAGGATCATATGAGGCGAGCTGGTGATGTCTGTTTCTCTGATGTTTACCGTGAGGGTGGAGCAACTATTGGAATTGTTGATTATACCAACTATGAGGATATGAAACAAGCGATAAGAAAGCTTGATGACTCAGAGTTCCGTAATGCATTTTC]
[+] EMBL CB647284 [GCCCTCCTCCTCCGCCGCCGCCGCCGCCGCCTCCGCCTCGCCGCCGGCGCAGAGTCGCAGGAACGATGAGCCGACGCAACAGCCGCACCATCTATGTGGGCAATCTCCCCGGAGACATTCGCGAGAGGGAAGTGGAGGATCTCTTCTATAAGTATGGCCGTATTGTGGATATTGACTTGAAAATTCCTCCAAGGCCTCCTGGTTATGCTTTTGTTGAGGGAAAGGAATAGGCAAATCTCTAAAATGGATAAGCTGGCAAGCACAGGTTTATAAACAGGAGTTAGGTATGGGTTGTGTGATTTGAACGATCAAGTAACGGATACAAGACATAGACCCCCTCCAGTTTGAAGACCCTCGTGATGCACAAGATGCAATTTATGGCCGTCATGGATATGACTTTGATGGCCACAGGTTGCGGGTGGAGTTAGCTCATGGTGGCAGAGGCCCTTCTTTTGATCGATCAAGTAGCTATAGCAGTGCTGGGCGCCGTGGTGCCGCTAAACGTACTGATTACCGAGTTATGGTTACTGGATTACCTTCGTCAGCATCATGGCAAGACCTCAAGGATCATATGAGGCGAGCTGGTGATGTCTGTTTCTCTGATGTTTACCGTGAGGGTGGAGCCACTATTGGAATTGTTGATTATACCAA ]
consensusID : consensus_13821#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 495 fasta sequence
[CCGCCCACGCGTCCGCCCACNCGTCCGGAAGCCGCAGCCGCTCGATCTCCAGAAGCAGAAGCCGCAGTTATAGCAGAAGCAGGAGTCCAAGATCTAGGTCTGCTTCTCGGTCTCACTCACCTGTGAAAGAAAGATCTAGGTCGGCTTCACAGTCTCGCTCACCTGTGAAGGAAAGATCACCATCAAGATCCCCACCCCCTGCTACTTCTCCTCCTCGTGAAAAGTCAGCAAGCAAGAGCCCTGTCAAGAGCAGAAGTTTATCCCGATCCCCATCTCCTGTGAAATCTGAGTGAAGATGGATGCACTTGAAGCCTGCCAGAAACTATTTCATGATTTGTGGAGCTGAGTTTCGGAA-GGCAGTAGATTGTGGATTAT-GGTTTATCTGTTTCTGCGTTACCATTGTT-GTTACTTTTCAGAAGAGAGCCGTGTTATTTCACTGTTGCTTGGTCATGTCGNAATATCTGTCAGAANCATTGCCTTAAAAAAAAAAAAAAA]
[+] EMBL AU063596 [CCGCCCACGCGTCCGCCCACNCGTCCGGAAGCCGCAGCCGCTCGATCTCCAGAAGCAGAAGCCGCAGTTATAGCAGAAGCAGGAGTCCAAGATCTAGGTCTGCTTCTCGGTCTCACTCACCTGTGAAAGAAAGATCTAGGTCGGCTTCACAGTCTCGCTCACCTGTGAAGGAAAGATCACCATCAAGNTCCCCACCCCCTGCTACTTCTCCTCCTCGTGAAAAGTCAGCAAGCAAGAGCCCTGTCAAGAGCAGAAGTTTATCCCGATCCCCATCTCCTGTGAAATCTGAGTGAAGATGGATGNACTTGAAGCCTGCCAGAAACTATTTCATGATTTGTGGAGCTGAGTTTCGGAA GGCAGTAGATTGTGGATTAT GGTTTATCTGTTTCTGCGTTACCATTGTTGGTTACTTTTCAGAAGAGAGCCGTGTTATTTCACTG ]
[+] EMBL AU165273 [ GCCGCTCGATCTCCAGAAGCAGAAGCCGCAGTTATAGCAGAAGCAGGAGTCCAAGATCTAGGTCTGCTTCTCGGTCTCACTCACCTGTGAAAGAAAGATCTAGGTCGGCTTCACAGTCTCGCTCACCTGTGAAGGAAAGATCACCATCAAGATCCCCACCCCCTGCTACTTCTCCTCCTCGTGAAAAGTCAGCAAGCAAGAGCCCTGTCAAGAGCAGAAGTTTATCCCGATCCCCATCTCCTGTGAAATCTGAGTGAAGATGGATGCACTTGAAGCCTGCCAGAAACTATTTCATGATTTGTGGAGCTGAGTTTCGGAA GGCAGTAGATTGTGGATTAT GGTTTATCTGTTTCTGCGTTACCATTGTT GTTACTTTTCAGAAGAGAGCCGTGTTATTTCACTGTTGCTTGGTCATGTCGNAATATCTGTCAGAANCATTGCCTTAAAAAAAAAAAAAAA]
[+] EMBL C29037 [ GCCGCTCGATCTCCAGAAGCAGAAGCCGCAGTTATAGCAGAAGCAGGAGTCCAAGATCTAGGTCTGCTTCTCGGTCTCACTCACCTGTGAAAGAAAGATCTAGGTCGGCTTCACAGTCTCGCTCACCTGTGAAGGAAAGATCACCATCAAGATCCCCACCCCCTGCTACTTCTCCTCCTCGTGAAAAGTCAGCAAGCAAGAGCCCTGTCAAGAGCAGAAGTTTATCCCGATCCCCATCTCCTGTGAAATCTGAGTNAAGATGGATGCACTTGAAGCCTGCCAGAAACTATTTCATGATTTGTGGAGCTGAGTTTCGGAAGGGCAGTAGATTGTGGATTATGGGTTTATCTGTTTCTGGGTTACCATTGTG GTTAC TTTCAGAAGAAAGCCGTG TAATTAACTGTTG ]
[+] EMBL AU182048 [ CAGTTATAGCAGAAGCAGGAGTCCAAGATCTAGGTCTGCTTCTCGGTCTCACTCACCTGTGAAAGAAAGATCTAGGTCGGCTTCACAGTCTCGCTCACCTGTGAAGGAAAGATCACCATCAAGATCCCCNCCCCCTGCTACTTCTCCTCCTCGTGAAAAGTCAGCAAGCAAGAGCCCTGTCAAGAGCAGAAGTTTATCCCGATCCCCATNTCCTGTGAAATNTGAGTGAAGATGGATGCACTTGAAGCCTGCCAGAAACTATTTCATGATTTGTGGAGCTGAGTTTCGGAA GGCAGTAGATTGTGGATTAT GGTTTATCTGTTTNTGCGTTACCATTGTT GTTACTTTTCAGAANAGAGCCGTGTTATTTCACTGTTGCTTGGTCATGTCGTAATATCTGTCAGAAACATTGCCTTAAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13821#0 ------------------------------------------------------------
consensus_13821#3 ------------------------------------------------------------
consensus_13821#1 CTTCTCGAGCCCNCCTCCTCCGCCGCCGCCGCCGCCGCCTCCGCCTCNCCGCCGGGCAGA 60
consensus_13821#2 ------------------------------------------------------------
consensus_13821#0 ------------------------------------------------------------
consensus_13821#3 ------------------------------------------------------------
consensus_13821#1 GTCGCAGGAACGATGAGCCGACGCAACANCCGCACCATCTATGTGGGCAATCTCCCCGGA 120
consensus_13821#2 ------------------------------------------------------------
consensus_13821#0 ------------------------------------------------------------
consensus_13821#3 ------------------------------------------------------------
consensus_13821#1 GACATTCGCGAGAGGGAAGTGGAGGATCTCTTCTATAAGTATGGCCGTATTGTGGATATT 180
consensus_13821#2 ------------------------------------------------------------
consensus_13821#0 -ACTTGAACCTTCCTCCAAGGCCTCCTGGTTATGCTTTTGTTGAGTTTGAAGACCCTCGT 59
consensus_13821#3 ------------------------------------------------------------
consensus_13821#1 GACTTGAAAATTCCTCCAAGGCCTCCTGGTTATGCTTTTGTTGAGTTTGAAGACCCTCGT 240
consensus_13821#2 ------------------------------------------------------------
consensus_13821#0 GATGCACAAGATGCAATTTATGGCCGTCATGGATATGACTTTGATGGCCACAGGTTGCGG 119
consensus_13821#3 ------------------------------------------------------------
consensus_13821#1 GATGCACAAGATGCAATTTATGGCCGTCATGGATATGACTTTGATGGCCACAGGTTGCGG 300
consensus_13821#2 ------------------------------------------------------------
consensus_13821#0 GTGGAGTTAGCTCATGGTGGCAGAGGCCCTTCTTTTGATCGATCAAGTAGCTATAGCAGT 179
consensus_13821#3 ------------------------------------------------------------
consensus_13821#1 GTGGAGTTAGCTCATGGTGGCAGAGGCCCTTCTTTTGATCGATCAAGTAGCTATAGCAGT 360
consensus_13821#2 ------------------------------------------------------------
consensus_13821#0 GCTGGGCGCCGTGGTGCCGCTAAACGTACTGATTACCGAGTTATGGTTACTGGATTACCT 239
consensus_13821#3 ------------------------------------------------------------
consensus_13821#1 GCTGGGCGCCGTGGTGCCGCTAAACGTACTGATTACCGAGTTATGGTTACTGGATTACCT 420
consensus_13821#2 ------------------------------------------------------------
consensus_13821#0 TCGTCAGCATCATGGCAAGACCTCAAGGATCATATGAGGCGAGCTGGTGATGTCTGTTTC 299
consensus_13821#3 ------------------------------------------------------------
consensus_13821#1 TCGTCAGCATCATGGCAAGACCTCAAGGATCATATGAGGCGAGCTGGTGATGTCTGTTTC 480
consensus_13821#2 ------------------------------------------------------------
consensus_13821#0 TCTGATGTTTACCGTGAGGGTGGAGCAACTATTGGAATTGTTGATTATACCAACTATGAG 359
consensus_13821#3 ------------------------------------------------------------
consensus_13821#1 TCTGATGTTTACCGTGAGGGTGGAGCAA----TGGAATTGTTGATTATACCAACTATGAG 536
consensus_13821#2 ------------------------------------------------------------
consensus_13821#0 GATATGAAACAAGCGATAAGAAAGCTTGATGACTCAGAGTTCCGTAATGCATTTTCACGG 419
consensus_13821#3 ------------------------------------------------------------
consensus_13821#1 GATATGAAACAAGCGATAAGAAAGCTTGATGACTCAGAGTTCCGTAATGCATTTTCACGG 596
consensus_13821#2 ------------------------------------------------------------
consensus_13821#0 GCATATATCAGGGTGAGGGAGTATGATTCTGCTAAGCGCAGCCGCTCTCGTTCCAGAGGT 479
consensus_13821#3 ------------------------------------------------------------
consensus_13821#1 GCATATATCAGGGTGAGGGAGTATGATTCTGCTAAGCGCAGCCGCTCTCGTTCCAGAGGT 656
consensus_13821#2 ------------------------------------------------------------
consensus_13821#0 AGAAGCCACAGCCGC-TCTATCTCCAGAAGCAGAAGCCGCAGCCGCTCGATCTCCAGAAG 538
consensus_13821#3 -----CCGCCCACGCGTCCGCCCACNCGTCCGGAAGCCGCAGCCGCTCGATCTCCAGAAG 55
consensus_13821#1 AGAAGCCACAGCCGC-TCTATCTCTAGAAGCAGAAGCCGCAGCCGCTCGATCTCCAGAAG 715
consensus_13821#2 ---------GCCCTCCTCCTCCGCCGCCGCC-GCCGCCGCCTCCGCCTCGCCGCCGGC-G 49
* * ** * * * ***** **** * ** * *
consensus_13821#0 CAGAA--GCCGCAGTTAT-AGCAGAAGCAGGAGTC-CAAGATCTAGGTCTGCTTCTCGGT 594
consensus_13821#3 CAGAA--GCCGCAGTTAT-AGCAGAAGCAGGAGTC-CAAGATCTAGGTCTGCTTCTCGGT 111
consensus_13821#1 CAGAA--GCCGCAGTTAT-AGCAGAAGCAGGAGTC-CAAGATCTAGGTCTGCTTCTCGGT 771
consensus_13821#2 CAGAGTCGCAGGAACGATGAGCCGACGCAACAGCCGCACCATCTATGTGGGCAATCTCCC 109
**** ** * * ** *** ** *** ** * ** ***** ** **
consensus_13821#0 CTCACTCACCTGTGAAAGAAAGATCTAGGTCGGCTTCAC--AGTCTCGCTCACCTGTGAA 652
consensus_13821#3 CTCACTCACCTGTGAAAGAAAGATCTAGGTCGGCTTCAC--AGTCTCGCTCACCTGTGAA 169
consensus_13821#1 CTCACTCACCTGTGAAAGAAAGATCTAGGTCGGCTTCAC--AGTCTCGCTCACCTGTGAA 829
consensus_13821#2 CGGAGACATTCGCGAGAGGGAAGTGGAGGATCTCTTCTATAAGTATGGCCGTATTGTGGA 169
* * ** * ** ** * * *** **** *** * ** **** *
consensus_13821#0 GGAAAGATTTGGGACATGCAGCTATTTGGGTTGCGTTGGTAGGATATTGGATGCGTTGAG 712
consensus_13821#3 GGAAAGAT---------------------------------------------------- 177
consensus_13821#1 GGAAAGAT---------------------------------------------------- 837
consensus_13821#2 TATTGACTTGAAAATTC------------------------------------------- 186
*
consensus_13821#0 AACCAAAGGATGGTTTGGAACGTTGGATAGTTCTGCTGGCTAGTGACATACTGTATGACA 772
consensus_13821#3 ------------------------------------------------------------
consensus_13821#1 ------------------------------------------------------------
consensus_13821#2 --CTCCAAGGCCTCCTGGTTATGCTTTTGTTGAGGGAAAGGAATAGGCAAATCTCTAAAA 244
consensus_13821#0 AGTGGACTACAACCAGCGATAGGAGCAAGATAGGGCTGGCTCTAAACATATTTGGACTTA 832
consensus_13821#3 ------------------------------------------------------------
consensus_13821#1 ------------------------------------------------------------
consensus_13821#2 TGGATAAGCTGGCAAGCACAGGTTTATAAACAGGAGTTAGGTATGGGTTGTGTGATTTGA 304
consensus_13821#0 TGGAGTGCATTTCGTGATCACCATCAAGATCCCCACCCCCTGCTACTTCTCCTCCTCGTG 892
consensus_13821#3 ------------------CACCATCAAGATCCCCACCCCCTGCTACTTCTCCTCCTCGTG 219
consensus_13821#1 ------------------CACCATCAAGATCCCCACCCCCTGCTACTTCTCCTCCTCGTG 879
consensus_13821#2 ACGATCAAGTAACGGATACAAGACATAGACCCCCTCCAGTT--TGAAGACCCTCGTGATG 362
** * *** **** ** * * **** * **
consensus_13821#0 AAAAGTCAGCAAGCAAGAGCCCTGTCAAGAGCAGAAGTTTA----TCCCGATCCCCATCT 948
consensus_13821#3 AAAAGTCAGCAAGCAAGAGCCCTGTCAAGAGCAGAAGTTTA----TCCCGATCCCCATCT 275
consensus_13821#1 AAAAGTCAGCAAGCAAGAGCCCTGTCAAGAGCAGAAGTTTA----TCCCGATCCCCATCT 935
consensus_13821#2 CACAAGATGCAATTTATGGCC--GTCATGGATATGACTTTGATGGCCACAGGTTGCGGGT 420
* * **** * *** **** * * * *** * * * *
consensus_13821#0 CCTGTGAAATCTGAGTGAAGATGGATGCACTTGAAGCCTGCCAGA-AACTATTTCA-TGA 1006
consensus_13821#3 CCTGTGAAATCTGAGTGAAGATGGATGCACTTGAAGCCTGCCAGA-AACTATTTCA-TGA 333
consensus_13821#1 CCTGTGAAATCTGAGTGAAGATGGATGCACTTGAAGCCTGCCAGA-AACTATTTCA-TGA 993
consensus_13821#2 GGAGTTAGCTCATGGTGGCAGAGGCCCTTCTTTTGATCGATCAAGTAGCTATAGCAGTGC 480
** * ** *** ** *** * ** * **** ** **
consensus_13821#0 TTTGTGGAGCTGAGTTTCGGAAGGCAGTAGATTGTGGATTATGGTTTATCTGTT-TCTGC 1065
consensus_13821#3 TTTGTGGAGCTGAGTTTCGGAAGGCAGTAGATTGTGGATTATGGTTTATCTGTT-TCTGC 392
consensus_13821#1 TTTGTGGAGCTGAGTTTCGGAAGGCAGTAGATTGTGGATTATGGTTTATCTGTT-TCTGC 1052
consensus_13821#2 TGGGCGCCGTGGTGCCGCTAAACGTACTGATTACCGAGTTATGGTTACTGGATTACCTTC 540
* * * * * * * ** * * * * * ******** * ** ** *
consensus_13821#0 GTTACCATTGTTGTTACTTTTCA----------GAAGAGAGCCG----TGT-TATTTCAC 1110
consensus_13821#3 GTTACCATTGTTGTTACTTTTCA----------GAAGAGAGCCG----TGT-TATTTCAC 437
consensus_13821#1 GTTACCATTGTTGTTACTTTTCA----------GAAGAGAGCCG----TGT-TATTTCAC 1097
consensus_13821#2 GTCAGCATCATGGCAAGACCTCAAGGATCATATGAGGCGAGCTGGTGATGTCTGTTTCTC 600
** * *** * * * *** ** * **** * *** * **** *
consensus_13821#0 TGTTGCTTG--GTCATGTCGTAATATCTGTCAGAAACATTGCCT-TACATGCTTAGCGTT 1167
consensus_13821#3 TGTTGCTTG--GTCATGTCGNAATATCTGTCAGAANCATTGCCT-TAAAAAAAAAAAAAA 494
consensus_13821#1 TGTTGCTTG--GTCATGTCGTAATATCTGTCAGAAACATTGCCT-TACATGCTTAGCGTT 1154
consensus_13821#2 TGATGTTTACCGTGAGGGTGGAGCAACTATTGGAATTGTTGATTATACCAACTATGAGGA 660
** ** ** ** * * * * * ** * *** *** * **
consensus_13821#0 TTACTTGCCATCACCAATCTATCAGACCTCGTAGCACATGGTGCTCGAACTTCATGCTAT 1227
consensus_13821#3 A----------------------------------------------------------- 495
consensus_13821#1 TTACTTGCCATCACCAATCTATCAGACCTCGTAGCACATGGTGCTCGAACTTCATGCTAT 1214
consensus_13821#2 TATGAAACAAGCGATAAGAAAGCTTGATGACTCAGAGTTCCGTAATGCATTTTC------ 714
consensus_13821#0 ACATACAGCACTATGAACTCTGCTATATTCTAAAGCTCAACTATCTGTAGTAACTGCAGG 1287
consensus_13821#3 ------------------------------------------------------------
consensus_13821#1 ACATACAGCACTATGAACTCTGCTATATTCTAAAGCTCAACTATCTGTAGTAACTGCAGG 1274
consensus_13821#2 ------------------------------------------------------------
consensus_13821#0 AAGCCTTTGCGCTTCAATTATTGTCTTTTTACTCTAGTTTTTTAGAGCTTGTGCTTGTGT 1347
consensus_13821#3 ------------------------------------------------------------
consensus_13821#1 AAGCTTTGCGCCTAATATTGCTTTTACTTAGTTTTAAAGCT----GGCTTGGACTGCCGG 1330
consensus_13821#2 ------------------------------------------------------------
consensus_13821#0 ACTTGTATGCACCTGTTATGTTGTAATTCTACAGAGTGGTTTTCCTCGCTTAATTGTTGA 1407
consensus_13821#3 ------------------------------------------------------------
consensus_13821#1 CGGCGTCAAACAACTTTGTACCGAACTTAGGGGGCCCGTCCCATTGCATTGAGTGATTAC 1390
consensus_13821#2 ------------------------------------------------------------
consensus_13821#0 CATGTTTTGTCGTTCGGTGT 1427
consensus_13821#3 --------------------
consensus_13821#1 CGCCCTGCGCGTTTC----- 1405
consensus_13821#2 --------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||