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Oryza sativa
cluster # 13826 cluster # 13826       Sequences # 14       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13826#0 length = 1388 sequences # 13  
consensus_13826#1 length = 425 sequences # 1  

consensusID : consensus_13826#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 13
consensus length = 1388
fasta sequence
                              [TTGGGCGGGTGTTCTCGGGAATGAGAGCTTCACCACAGAGTGCTGGCCGTCCTTTTCTGGCTAGCCGCTTGATGGGAGGAATAGGTGATCTTCGTCAAGTTGAAGCCAAGTATCCTGCTCTGCTTTTCAAGCAGCAGCTTACAGCTTTCCTTGAGAAAATCTATGGCATGATAAGAGACAACTTGAAGAAGGAAATATCCCCATTACTTGGTCTTTGCATCCAGGCGCCGAG-AACATCTCGTGCTAGTCTAATTAAAGGATCTCGTTCTCAAGCGAATGCCTTGGCCCAACAAACCCTGATTGCCCATTGGCAGAGCATTGTGAAAATTCTAACGAACTACTTGAATGTTCTGAAAGCCAATTATGTCCCTTCATTCTTAATCAGCAAGGTGTTCACTCAAATCTTCTCATTTATTAATGTTCAGTTGTTTAACAGTCTGCTTCTTCGACGAGAGTGCTGTTCATTTAGCAATGGAGAATATGTCAAAGCTGGACTGGCAGAATTAGAGCAGTGGTGTATTTATGCGACTGAGGAGTATGCAGGTTCTTCCTGGGAAGAATTGAAGCATATTAGGCAGGCTGTTGGATTCCTTGTAATTCATCAAAAGCCAAAGAAAACACTGAAAGAAATTACCAACGATTTATGCCCTGTCCTAAGCATACAACAGCTATACCGAATCAGCACAATGTATTGGGATGATAAATATGGAACCCATACTGTTTCGTCAGAGGTCATCTCAAGTATGAGGATAATGATGACAGAAGACTCGAATAACGCAGTGAGCAGTTCTTTCTTGC-TGGACGATGATTCAAGC-ATTCCGTTTT--CAGTGGATGATATCTCAAAGTCAATGAAAGAAATTGAGGTAACA-GATGTTGACATG-CCGCCTTTGATCAGGGAGAACTCTGGCTTTACCTTCCTACACTA---AAAGGACTATCAAGAGTGGTGATCCTTTCAATGCAAAACATCTTCCTATTCTCCTTTTGTCCAACTCATCTCCAACTTGTGCATAACTCATGTACATACTACTCGTGCCGTTTTGCCCTTTTA-CCAAAATCACA-TGGTCTAGTCTGGTCAGTAATCGTTAGGCCTATTTGTTATTTATTATTTAGGTCTTCGGTTTGATTTGATTGGTTCTTTGTCCAATTTTCTCCCCTTTTTTTCTGGGGGATCAAATTTATATTGTAATGGGAGGGGCCGGATGCCCC-T-CCCTGGTCAGGTCCCCGAGCTTTGTTATTGGAAAAGCTCGTGTTCCTCTTGGCGTCTGGAAAAGGTTTT-CCGCATCTGTGTCGGGTCTCC-GGTGTCGTTCATTTC-AATCTTCACCGTATTGTAAATTGCAAAGAAGATCATAGTTGAAAAAAAAATCACATTGGAAAACTGAAAAAAAAAA]

[+] EMBL CB667349             [TTGGGCGGGTGTTCTCGGGAATGAGAGCTTCACCACAGAGTGCTGGCCGTCCTTTTCTGGCTAGCCGCTTGATGGGAGGAATAGGTGATCTTCGTCAAGTTGAAGCCAAGTATCCTGCTCTGCTTTTCAAGCAGCAGCTTACAGCTTTCCTTGAGAAAATCTATGGCATGATAAGAGACAACTTGAAGAAGGAAATATCCCCATTACTTGGTCTTTGCATCCAGGCGCCGAG AACATCTCGTGCTAGTCTAATTAAAGGATCTCGTTCTCAAGCGAATGCCTTGGCCCAACAAACCCTGATTGCCCATTGGCAGAGCATTGTGAAAATTCTAACGAACTACTTGAATGTTCTGAAAGCCAATTATGTCCCTTCATTCTTAATCAGCAAGGTGTTCACTCAAATCTTCTCATTTATTAATGTTCAGTTGTTTAACAGTCTGCTTCTTCGACGAGAGTGCTGTTCATTTAGCAATGGAGAATATGTCAAAGCTGGACTGGCAGAATTAGAGCAGTGGTGTATTTATGCGACTGAGGAGTATGCAGGTTCTTCCTGGGAAGAATTGAAGCATATTAGGCAGGCTGTTGGATTCCTTGTAATTCATCAAAAGCCAAAGAAAACACTGAAAGAAATTACCAACGATTTATGCCCTGTCCTAAGCATACAACAGCTATACCGAATCAGCACAATGTATTGGGATGATAAATATGGAACCCATACTGTTTCGTCAGAGGTCATCTCAAGTATGAGGATAATGATGACAGAAGACTCGAATAACGCAGTGAGCAGTTCTTTCTTGC TGGACGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CF304900             [                                                                                          TTCGTCAAGTTGAAGCCAAGTATCCTGCTCTGCTTTTCAAGCAGCAGCTTACAGCTTTCCTTGAGAAAATCTATGGCATGATAAGAGACAACTTGAAGAAGGAAATATCCCCATTACTTGGTCTTTGCATCCAGGCGCCGAG AACATCTCGTGCTAGTCTAATTAAAGGATCTCGTTCTCAAGCGAATGCCTTGGCCCAACAAACCCTGATTGCCCATTGGCAGAGCATTGTGAAAATTCTAACGAACTACTTGAATGTTCTGAAAGCCAATTATGTCCCTTCATTCTTAATCAGCAAGGTGTTCACTCAAATCTTCTCATTTATTAATGTTCAGTTGTTTAACAGTCTGCTTCTTCGACGAGAGTGCTGTTCATTTAGCAATGGAGAATATGTCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AU184221             [                                                                                                                                                                                                                                 CGCCGAGNAACATCTCGTGCTAGTCTAATTAAAGGATCTCGTTCTCAAGCGAATGCCTTGGCCCAACAAACCCTGATTGCCCATTGGCAGAGCATTGTGAAAATTCTAACGAACTACTTGAATGTTCTGAAAGCCAATTATGTCCCTTCATTCTTAATCAGCAAGGTGTTCACTCAAATCTTCTCATTTATTAATGTTCAGTTGTTTAACAGTCTGCTTCTTCGACGAGAGTGCTGTTCATTTAGCAATGGAGAATATGTCAAAGCTGGACTGGCAGAATTAGAGCAGTGGTGTATTTATGCGACTGAGGAGTATGCAGGTTCTTCCTGGGAAGAATTGAAGCATATTAGGCAGGCTGTTGGATTCCTTGTAATTCATCAAAAGCCAAAGAAAACACTGAAAGAAATTACCAACGATTTATGCCCTGTCCTAAGCATACAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL OSR15112B            [                                                                                                                                                                                                                                 CGCCGAG AACATCTCGTGCTAGTCTAATTAAAGGATCTCGTTCTCAAGCGAATGCCTTGGCCCAACAAACCCTGATTGCCCATTGGCAGAGCATTGTGAAAATTCTAACGAACTACTTGAATGTTCTGAAAGCCAATTATGTCCCTTCATTCTTAATCAGCAAGGTGTTCACTCAAATCTTCTCATTTATTAATGTTCAGTTGTTTAACAGTCTGCTTCTTCGACGAGAGTGCTGTTCATTTAGCAATGGAGAATATGTCAAAGCTGGACTGGCAGAATTAGAGCAGTGGTGTATTTATGCGACTGAGGAGTATGCAGGTTCTTCCTGGGAAGNATTGAAGCATATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CB631466             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ATACTGTTTCGTCAGAGGTCATCTCAAGTATGAGGATAATGATGACAGAAGACTCGAATAACGCAGTGAGCAGTTCTTTCTTGC TGGACGATGATTCAAGC ATTCCGTTTT  CAGTGGATGATATCTCAAAGTCAATGAAAGAAATTGAGGTAACA GATGTTGACATG CCGCCTTTGATCAGGGAGAACTCTGGCTTTACCTTCCTACACTA   AAAGGACTATCAAGAGTGGTGATCCTTTCAATGCAAAACATCTTCCTATTCTCCTTTTGTCCAACTCATCTCCAACTTGTGCATAACTCATGTACATACTACTCGTGCCGTTTTGCCCTTTTA CCAAAATCACA TGGTCTAGTCTGGTCAGTAATCGTTAGGCCTATTTGTTATTTATTATTTAGGTCTTCGGTTTGATTTGATTGGTTCTTTGTCCAATTTTCTCCCCTTTTTTTCTGGGGGATCAAATTTATATTGTAATGGGAGGGGCCGGATGCCCC T CCCTGGTCAGGTCCCCGAGCTTTGTTATTGGAAAAGCTCGTGTTCCTCTTGGCGTCTGGAAAAGGTTTT CCGCATCTGTGTCGGGTCTCC GGTGTCGTTCATTTC AATCTTCACCGTATTGTAAATTACAGAGAAGATCATAGTTGAAAAAAAAATCACATg                   ]
[-] EMBL CB667350             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GGTCATCTCAAGTATGAGGATAATGATGACAGAAGACTCGAATAACGCAGTGAGCAGTTCTTTCTTGG TGGGCGATGATTCAAGC ATTCCGTTTT  CGGTGGATGATATCTCAAAGTCAATGAAAGAAATTGAGGTAGCA GATGTTGACATG CCGCCTTTGATCAGGGAGAACTCTGGCTTTACCTTCCTACACTAAAGAAAGGACTATCAAGAGTGGTGATCCTTTCAATGCAAAACATCTTCCTATTCTCCTTTTGTCCAACTCATCTCCAACTTGTGCATAACTCATGTACATACTACTCGTGCCCTTTTGCCCTTTTA CCAAAATCACA TGGTCTAGTCTGGTCAGTAATCGTTAGGCCTATTTGTTATTTATTATTTAGGACTTCGGTTTGATTTGATTGGTTCTTTGTCCAATTTTCTCCCCTTTTTTTNTGGGGGATCAAATTTATA TGTAA                                                                                                                                                                                                               ]
[+] EMBL AA752240             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TCATCTCAAGTATGAGGATAATGATGACAGAAGACTCGAATAACGCAGTATGCAGTTCTTTCTTGC TGGACGATGATTCAAGC ATTCCGTTTT  CAGTGGATGATATCTCAAAGTCAATGAAAGAAATTGAGGTAACA GATGTTGACATG CCGCCTTTGATCAGGGAGAACTCTGGCTTTACCTTCCTACACTA   AAAGGACTATCAAGAGTGGTGATCCTTTCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BM419413             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TAACGCAGTGGACAGTTCTTTCTTGCGTGGACGATGATTCAAGCAATTCCGTTTTTCCAGTGGATGATATCTCAAAGTCAATGAAAGAAATTGAGGTAACACGATGTTGACATGCCCGCCTTTGATCAGGGAGAACTCTGGCTTTACCTTCCTACACTA   AAAGGACTATCAAGAGTGTTGATCCTTTCAATGC AAACATCTTCCTATTCTCCTTTTGTCCAACTCATCTCCAACTTGTGCATAACTCATGTACATACTACTCGTGCCGTTTTGCCCTTTTA CCAAAATCACA TGGTCTAGTCTGGTCAGTAATCGTTAGGCCTATTTGTTATTTATTATTTAGGTCTTCGGTTTGATTTGATTGGTTCTTTGTCCAATTTTCTCCCCTTTTTTTCTGGGGGATCAAATTTATATTGTAATGGGA GGGCCGGATGCCCC T CCCTGGTCAGGTCCCCGAGCTTTGTTATTGGAAAAGCTCGTGTTCCTCTTGGCGTCTGGAAAAGGTTTT CCGCATCTGTGTCGGGTCTCC GGTGTCGTTCATTTCAAATCTTCACCGTATTGTAAATTGCAAAGAAGATCATAGTTGAAAAAAAAATCACATGGGAAAAaaaa         ]
[+] EMBL BI800837             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GTCAATGAAAGAAATTGAGGTAACA GATG TGACATG CCGCCTTTGATCAGGGAGAACTCTGGCTTTACCTTCCTACACTA   AAAGGACTATCAAGA TGGTGATCCTTTCAATGC AAACATCTTCCTATTCTCCTTTTGTCCAACTCATCTCCAACTTGTGCATAACTCATGTACATACTACTCGT CCGTTTTGCCCTTTTACCCAAAATCACA TGGTCTAGTCTGGTCAGTAATCGTTAGGCCTATTTGTTATTTATTATTTAGGTCTTCGGTTTGATTTGATTGGTTCTTTGTCCAATTTTCTCCCCTTTTTTTCTGGGGGATCAAATTTATATTGTAATGGGAGGGGCCGGATGCCCC T CCCTGGTCAGGTCCCCGAGCTTTGTTATTGGAAAAGCTCGTGTTCCTCTTGGCGTCTGGAAAAGGTTTT CCGCATCTGTGTCGGGTCTCC GGTGTCGTTCATTTC AATCTTCACCGTATTGTAAATTGC AAGAAGATCATAGTTGAAAAAAAAATCACCTTGGAAAACTGAAAAAAAAAA]
[+] EMBL BM038330             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TTGATCAGGGAGAACTCT GCTTTACCTTCCTACACTA   AAAGGACTATCAAGA TGGTGATCCTTTCAAT CCAAACATCTTCCTATTCTCCTTTTGTCCAACTCATCTCCAACTTGTGCATAACTCATGTACATACTACTCGT CCGTTTTGCCCTTTTA CCCAAATCACACTGGTCTAGTCTGGTCAGTAATCGTTAGGCCTATTTGTTATTTATTATTTAGGTCTTCGGTTTGATTTGATTGGTTCTTTGTCCCATTTTCTCCCCTTTTTTTCTGGGGGATCAAATTTATATTGTAATGGGAGGGGCCGGATGCCCC T  CCTGGTCAGGTCCCCGAGCTTTGTTATTGGAAAAGCTCGTGTTCCTCTTGGCGTCTGGAAAAGGTTTT CCGCATCTGTGTCGGGTCTCC GGTGTCGTTCATTTC  ATCTTCACCGTATTGTAAATT CCAAGAAGATCATAGTTGAAAAAAAAATCNCATTGGAAAAa            ]
[+] EMBL AU184184             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CAAAACATCTTCCTATTCTCCTTTTGTCCAACTCATCTCCAACTTGTGCATAACTCATGTACATACTACTCGTGCCCTTTTGCCCTTTTA CCAAAATCACA TGGTCTAGTCTGGTCAGTAATCGTTAGGCCTATTTGTTATTTATTATTTAGGACTTCGGTTTGATTTGATTGGTTCTTTGTCCAATTTTCTCCCCTTTTTTTNTGGGGGATCAAATTTATATTGTAATGGGAGGGGCCGGATGCCCC TCCCCTTGGCAGGTCCCCGAGCTTTGTTATTGGAAAAGCTCGTGTTCCTCTTAGCGTCTGGAAAAGGTTTTCCCGCATCTGTGTCGGGTCTCC GGTGTCGTTCATTTC AATNTTCNCCGTATTGTAAATTGCAAAGAAGATCATAGTTGAAAAAAAAATCACATTGGAAAACTGAAAAAAAAAA]
[-] EMBL AA752385             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         AAAACATCTTCCTATTCTCCTTTTGTCCAACTCATCTCCAACTTGTGCATAACTCATGTACATACTACMCGTGCSGTTTTGCCCTTTTA CCAAAATCACA TGGTCTAGTCTGGTCAGTAATCGTTAGGCCTATTTGTTATTTATTATTTAGGTCTTCGGTTTGATTTGATTGGTTCTTTGTCCAATTTTCTCCCCTTTTTTTCTGGGGGATCAAATTTATATTGTAATGGGAGGGGCCGGATGCCCC T CCCTGGTCAGGTCCCCGAGCTTTGTTATTGGAAAAGCTCGTGTTCCTCTTGGCGTCTGGAAAAGGTTTT CCGCATCTGTGTCGGGTCTCC GGTGTCGTTCATTTC AATCTTCACCGTATTGTAAATTGCAAAGAAGATCATAGTTGAAAAAAAAATCACATTGGA                ]
[+] EMBL AU184222             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CCTTTTTTTNTGGGGGANCAAATTTATATTGTAATGGNAGGGGCGGNATGCCCCNC CCCTGG CAGGTCCCCGAGCTTTGTTATTGGAAAAGCTCGTGTTCCTCTTAGCGTCTGGAAAAGGTTTT CCGCATCTGTGTCGGGTCTCCGGGTGTCGTTCATTTC AATCTTCNCCGTATTGTAAATTGCAAAGAAGATCATAGTTGAAAAAAAAATCACATTGGAAAACTGAAAAAAAAAA]


>consensus_13826#0 TTGGGCGGGTGTTCTCGGGAATGAGAGCTTCACCACAGAGTGCTGGCCGTCCTTTTCTGG CTAGCCGCTTGATGGGAGGAATAGGTGATCTTCGTCAAGTTGAAGCCAAGTATCCTGCTC TGCTTTTCAAGCAGCAGCTTACAGCTTTCCTTGAGAAAATCTATGGCATGATAAGAGACA ACTTGAAGAAGGAAATATCCCCATTACTTGGTCTTTGCATCCAGGCGCCGAGAACATCTC GTGCTAGTCTAATTAAAGGATCTCGTTCTCAAGCGAATGCCTTGGCCCAACAAACCCTGA TTGCCCATTGGCAGAGCATTGTGAAAATTCTAACGAACTACTTGAATGTTCTGAAAGCCA ATTATGTCCCTTCATTCTTAATCAGCAAGGTGTTCACTCAAATCTTCTCATTTATTAATG TTCAGTTGTTTAACAGTCTGCTTCTTCGACGAGAGTGCTGTTCATTTAGCAATGGAGAAT ATGTCAAAGCTGGACTGGCAGAATTAGAGCAGTGGTGTATTTATGCGACTGAGGAGTATG CAGGTTCTTCCTGGGAAGAATTGAAGCATATTAGGCAGGCTGTTGGATTCCTTGTAATTC ATCAAAAGCCAAAGAAAACACTGAAAGAAATTACCAACGATTTATGCCCTGTCCTAAGCA TACAACAGCTATACCGAATCAGCACAATGTATTGGGATGATAAATATGGAACCCATACTG TTTCGTCAGAGGTCATCTCAAGTATGAGGATAATGATGACAGAAGACTCGAATAACGCAG TGAGCAGTTCTTTCTTGCTGGACGATGATTCAAGCATTCCGTTTTCAGTGGATGATATCT CAAAGTCAATGAAAGAAATTGAGGTAACAGATGTTGACATGCCGCCTTTGATCAGGGAGA ACTCTGGCTTTACCTTCCTACACTAAAAGGACTATCAAGAGTGGTGATCCTTTCAATGCA AAACATCTTCCTATTCTCCTTTTGTCCAACTCATCTCCAACTTGTGCATAACTCATGTAC ATACTACTCGTGCCGTTTTGCCCTTTTACCAAAATCACATGGTCTAGTCTGGTCAGTAAT CGTTAGGCCTATTTGTTATTTATTATTTAGGTCTTCGGTTTGATTTGATTGGTTCTTTGT CCAATTTTCTCCCCTTTTTTTCTGGGGGATCAAATTTATATTGTAATGGGAGGGGCCGGA TGCCCCTCCCTGGTCAGGTCCCCGAGCTTTGTTATTGGAAAAGCTCGTGTTCCTCTTGGC GTCTGGAAAAGGTTTTCCGCATCTGTGTCGGGTCTCCGGTGTCGTTCATTTCAATCTTCA CCGTATTGTAAATTGCAAAGAAGATCATAGTTGAAAAAAAAATCACATTGGAAAACTGAA AAAAAAAA



consensusID : consensus_13826#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 425
fasta sequence
                              [AAGTATGAGGATAATGATGACAGAAGAMTCGAATAAMGCAGAGAGGCARTTCTTTTCTTTGCTGGGACGAWGAWWTCAAGCAWTCCGTTTTTCARTGGATAGATATCTCAAAAGTCAATAGAAAGAAAATTGAGGTTWACAGATAGTTTGACATAGCCCGCCWTTTGATCAGRGGAGAACWCTTKGCTTTTACMTTTYCTACACTWAAAAARGRCTATTCWAAGAGTWKGTGGATHMCTTTTCAATAGCGAAAAMAAACTTTCCTCWTACTWCCTTTTTGTGYCCAACWACATWCTYYCAACAWTGTGGCGATAAACWACATMGTGACATMACTCACRMGTGGCSCGTKTTTTGYSCCTTTTTTWHCAAAAAAACACATAGGGGCTAGTVMTGKGGTGCAGTGAAAACGTKTWGGGSCTCATTTT]

[+] EMBL AA752680             [AAGTATGAGGATAATGATGACAGAAGAMTCGAATAAMGCAGAGAGGCARTTCTTTTCTTTGCTGGGACGAWGAWWTCAAGCAWTCCGTTTTTCARTGGATAGATATCTCAAAAGTCAATAGAAAGAAAATTGAGGTTWACAGATAGTTTGACATAGCCCGCCWTTTGATCAGRGGAGAACWCTTKGCTTTTACMTTTYCTACACTWAAAAARGRCTATTCWAAGAGTWKGTGGATHMCTTTTCAATAGCGAAAAMAAACTTTCCTCWTACTWCCTTTTTGTGYCCAACWACATWCTYYCAACAWTGTGGCGATAAACWACATMGTGACATMACTCACRMGTGGCSCGTKTTTTGYSCCTTTTTTWHCAAAAAAACACATAGGGGCTAGTVMTGKGGTGCAGTGAAAACGTKTWGGGSCTCATTTT]


>consensus_13826#1 AAGTATGAGGATAATGATGACAGAAGAMTCGAATAAMGCAGAGAGGCARTTCTTTTCTTT GCTGGGACGAWGAWWTCAAGCAWTCCGTTTTTCARTGGATAGATATCTCAAAAGTCAATA GAAAGAAAATTGAGGTTWACAGATAGTTTGACATAGCCCGCCWTTTGATCAGRGGAGAAC WCTTKGCTTTTACMTTTYCTACACTWAAAAARGRCTATTCWAAGAGTWKGTGGATHMCTT TTCAATAGCGAAAAMAAACTTTCCTCWTACTWCCTTTTTGTGYCCAACWACATWCTYYCA ACAWTGTGGCGATAAACWACATMGTGACATMACTCACRMGTGGCSCGTKTTTTGYSCCTT TTTTWHCAAAAAAACACATAGGGGCTAGTVMTGKGGTGCAGTGAAAACGTKTWGGGSCTC ATTTT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13826#0      TTGGGCGGGTGTTCTCGGGAATGAGAGCTTCACCACAGAGTGCTGGCCGTCCTTTTCTGG 60
consensus_13826#1      ------------------------------------------------------------
                                                                                   

consensus_13826#0      CTAGCCGCTTGATGGGAGGAATAGGTGATCTTCGTCAAGTTGAAGCCAAGTATCCTGCTC 120
consensus_13826#1      ------------------------------------------------------------
                                                                                   

consensus_13826#0      TGCTTTTCAAGCAGCAGCTTACAGCTTTCCTTGAGAAAATCTATGGCATGATAAGAGACA 180
consensus_13826#1      ------------------------------------------------------------
                                                                                   

consensus_13826#0      ACTTGAAGAAGGAAATATCCCCATTACTTGGTCTTTGCATCCAGGCGCCGAGAACATCTC 240
consensus_13826#1      ------------------------------------------------------------
                                                                                   

consensus_13826#0      GTGCTAGTCTAATTAAAGGATCTCGTTCTCAAGCGAATGCCTTGGCCCAACAAACCCTGA 300
consensus_13826#1      ------------------------------------------------------------
                                                                                   

consensus_13826#0      TTGCCCATTGGCAGAGCATTGTGAAAATTCTAACGAACTACTTGAATGTTCTGAAAGCCA 360
consensus_13826#1      ------------------------------------------------------------
                                                                                   

consensus_13826#0      ATTATGTCCCTTCATTCTTAATCAGCAAGGTGTTCACTCAAATCTTCTCATTTATTAATG 420
consensus_13826#1      ------------------------------------------------------------
                                                                                   

consensus_13826#0      TTCAGTTGTTTAACAGTCTGCTTCTTCGACGAGAGTGCTGTTCATTTAGCAATGGAGAAT 480
consensus_13826#1      ------------------------------------------------------------
                                                                                   

consensus_13826#0      ATGTCAAAGCTGGACTGGCAGAATTAGAGCAGTGGTGTATTTATGCGACTGAGGAGTATG 540
consensus_13826#1      ------------------------------------------------------------
                                                                                   

consensus_13826#0      CAGGTTCTTCCTGGGAAGAATTGAAGCATATTAGGCAGGCTGTTGGATTCCTTGTAATTC 600
consensus_13826#1      ------------------------------------------------------------
                                                                                   

consensus_13826#0      ATCAAAAGCCAAAGAAAACACTGAAAGAAATTACCAACGATTTATGCCCTGTCCTAAGCA 660
consensus_13826#1      ------------------------------------------------------------
                                                                                   

consensus_13826#0      TACAACAGCTATACCGAATCAGCACAATGTATTGGGATGATAAATATGGAACCCATACTG 720
consensus_13826#1      ------------------------------------------------------------
                                                                                   

consensus_13826#0      TTTCGTCAGAGGTCATCTCAAGTATGAGGATAATGATGACAGAAGACTCGAATAACGCAG 780
consensus_13826#1      -------------------AAGTATGAGGATAATGATGACAGAAGAMTCGAATAAMGCAG 41
                                          *************************** ******** ****

consensus_13826#0      TGAG-CAGTTCTTTC--TTGCTGG-ACGATGATT-CAAGCATTCCGTTTT-CAGTGGAT- 833
consensus_13826#1      AGAGGCARTTCTTTTCTTTGCTGGGACGAWGAWWTCAAGCAWTCCGTTTTTCARTGGATA 101
                        *** ** ******   ******* **** **   ****** ******** ** ***** 

consensus_13826#0      GATATCTCAAA-GTCAATGAAAG--AAATTGAGGT-AACAGATG--TTGACATG--CCGC 885
consensus_13826#1      GATATCTCAAAAGTCAATAGAAAGAAAATTGAGGTTWACAGATAGTTTGACATAGCCCGC 161
                       *********** ******  **   **********  ******   *******   ****

consensus_13826#0      CTTT-GATCAGGG-AGAACTCT-GGCTTTA--CCTTCCTACACTAAAA--GGACTATCAA 938
consensus_13826#1      CWTTTGATCAGRGGAGAACWCTTKGCTTTTACMTTTYCTACACTWAAAAARGRCTATTCW 221
                       * ** ****** * ***** **  *****     ** ******* ***   * ****   

consensus_13826#0      GAGTGGTGATCCTTTCAATGCAAA--ACATCTTCCTATTCTCCTTTTGTCCAACTCATCT 996
consensus_13826#1      AAGAGTWKGTGGATHMCTTTTCAATAGCGAAAAMAAACTTTCCTCWT---------ACTW 272
                        ** *    *   *    *   **   *        * * ****  *         *   

consensus_13826#0      CCAACTTGTGCATAACTCATGTACATACTACTCGTGCCGTTTTGCCCTTTTACCAAAATC 1056
consensus_13826#1      CCTTTTTGTGYCCAACW-----ACATWCTYYCAACAWTGTGGCGATAAACWAC-ATMGTG 326
                       **   *****   ***      **** **         **   *       ** *   * 

consensus_13826#0      ACATGGTCTAGTC-TGGTCAGTAATCGTTAGGCCTATTTGTTATTTATTATTTAGGTCTT 1115
consensus_13826#1      ACATMACTCACRMGTGGCSCGT----KTTTTGYSCCTTTTTTWHCAAAAA---AACACAT 379
                       ****     *    ***   **     **  *    *** **    *  *   *   * *

consensus_13826#0      CGGTTTGATTTGATTGGTTCTTTGTCCAATTTTCTCCCCTTTTTTTCTGGGGGATCAAAT 1175
consensus_13826#1      AGGGGCTAGTVMTGKGGTGCAGTGAAAACGTKTWGGGSCTCATTTT-------------- 425
                        **    * *     *** *  **   *  * *     **  ****              

consensus_13826#0      TTATATTGTAATGGGAGGGGCCGGATGCCCCTCCCTGGTCAGGTCCCCGAGCTTTGTTAT 1235
consensus_13826#1      ------------------------------------------------------------
                                                                                   

consensus_13826#0      TGGAAAAGCTCGTGTTCCTCTTGGCGTCTGGAAAAGGTTTTCCGCATCTGTGTCGGGTCT 1295
consensus_13826#1      ------------------------------------------------------------
                                                                                   

consensus_13826#0      CCGGTGTCGTTCATTTCAATCTTCACCGTATTGTAAATTGCAAAGAAGATCATAGTTGAA 1355
consensus_13826#1      ------------------------------------------------------------
                                                                                   

consensus_13826#0      AAAAAAATCACATTGGAAAACTGAAAAAAAAAA 1388
consensus_13826#1      ---------------------------------
                                                        




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)