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Oryza sativa
cluster # 13828 cluster # 13828       Sequences # 14       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13828#0 length = 800 sequences # 12  
consensus_13828#1 length = 450 sequences # 1  
consensus_13828#2 length = 185 sequences # 1  

consensusID : consensus_13828#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 800
fasta sequence
                              [TCTTTTTTTTTGAAAACAACAA-ATTTCTCA-TATCTTCGTATTGCAAACATGC-GTATGCAAGTCCACAAAA-GGTTACAAGCATATATGTCCATTAAAAGGTAGGACACATGCCAACAATCATCATCTTAACTAAACTAGCAGTATTATTTCATCACAATCCTCCAGCTGAAAAAAATAAGCTGCAGGATATGTACCAATCTGC-TGGC-TGTTTAAAAAGATGCCAGACGAAATACCTTAGCAAAGCTGAAAAGCTTCCCA-TGATAGTAAGATATCATAATATTTCACAGGAACAAGCCAACAAACCACA-TGCA-GCGGTTCCAAAC-T-GGCT-T-GTTCATTCTC---CTACTC-GCCACCTCATCGCCACCAGAGATCTGCTTGTCAAGCGAGGTGTTTGAACTCTACATTCTG-TCCAGCAGTAGCCA-TTCGAAGTGCCATGCTCTCAGCTTGATCCTTAAAGTAACCCATACGAGCAACCTTTTCAACCATGTCTATTGGATGATTCTGCAGAGACTGTGGTCCTAAATGATGAAGCACCATGGGAGCACTAGACTGGGCTTGTTGAGGAAGGACAGCAACAACAGTAGCAGCATTGTTGGACGGATTTCCATAAGCAGTGTTATAGGCCTGGGCATTCCCCTGTACTGTATATGAGGCAACACCATGTAGGCTGACCTTGCTTGGTTTAAATGAGCCATTACCAAACGATTGAAGTTGCGGTGGCTGCTGAGACTGGATGCTATGCTCAGCCAGTGGGACTGAAATTGTGTTGCTTTGCACATAAACAGGAGCGACTTCATGATGAT]

[+] EMBL CB672529             [TCTTTTTTTTTGAAAACAACAA ATTTCTCA TATCTTCGTATCGCAAACATGC GTATGCAAGTCCACAAAA GGTTACAAGCATATATGTCCATTAAAAGGTAGGACACATGCCAACAATCATCATCTTAACTAAACTAGCAGTATTATTTCATCACAATCCTCCAGCTGAAAAAAATAAGCTGCAGGATATGTACCAATCTGC TGGC TGTTTAAAAAGATGCCAGACGAAATACCTTAGCAAAGCTGAAAAGCTTCCCA TGATAGTAAGATATCATAATATTTCACAGGAACAAGCCAACAAACCACA TGCA GCGGTTCCAAAC T GGCT T GTTCATTCTC   CTACTC GCCACCTCATCGCCACCAGAGATCTGCTTGTCAAGCGAGGTGTTTGAACTCTACATTCTG TCCAGCAGTAGCCA TTCGAAGTGCCATGCTCTCAGCTTGATCCTTAAAGTAACCCATACGAGCAACCTTTTCAACCATGTCTATTGGATGATTCTGCAGAGACTGTGGTCCTAAATGATGAAGCACCATGGGAGCACTAGACTGGGCTTGTTGAGGAAGGACAGCAACAACAGTAGCAGCATTGTTGGACGGATTTCCATAAGCAGTGTTATAGGCCTGGGCATTCCCCTGTACTGTATATGAGGCAACACCATGTAGGCTGACCTTGCTTGGTTTAAATGAGCCATTACCAAACGATTGAAGTTGCGGTGGCTGCTGAGACTGGATGCTATGCTCAGCCAGTGGGACTGAAATTGTGTTGCTTTGCACATAAACAGGAGCGACTTCATGAT   ]
[-] EMBL BQ908443             [ttTTTTTTTTGGAAAACAACAA ATTTCTCA TATCTTCGTATNGCAAACATGC GTATGCAAGTCCACAAAAGGGTTACAAGCATATATGTCCATTAAAAGGTAGGACACATGCCAACAATCATCATCTTAACTAAACTAGCAGTATTATTTCATCACAATCCTCCAGCTGAAAAAAATAAGCTGCAGGATATGTACCAATCTGCGTGGCGTGTTTAAAAAGATGCCAGACGAAATACCTTAGCAAAGCTGAAAAGCTTCCCAGTGATAGTAAGACATCATAATATTTCACAGGAACAAGCCAACAAACCACAGTGCAGGCGGTTCCAAACGTGGGCTGTGGTTCATTCTCGGGCTACTCGGCCACCTCATCGCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CB660303             [            AAAACAACAANATTTCTCACTATCTTCGTATTGCCAACATGCGGTATGCAAGTCCACAAAA GGTTACAAGCATATATGTCCATTAAAAGGTAGGACACATGCCAACAATCATCATCTTAACTAAACTAGCAGTATTATTTCATCACAATCCTCCAGCTGAAAAAAATAAGCTGCAGGATATGTACCAATCTGC TGGC TGTTTAAAAAGATGCCAGACGAAATACCTTAGCAAAGCTGAAAAGCTTCCCA TGATAGTAAGATATCATAATATTTCACAGGAACAAGCCAACAAACCACA TGCA GCGGTTCCAAAC T GGCT T GTTCATTCTC   CTACTC GCCACCTCATCGCCACCAGAGATCTGCTTGTCAAGCGAGGTGTTTGAACTCTACATTCTG TCCAGCAGTAGCCA TTCGAAGTGCCATGCTCTCAGCTTGATCCTTAAAGTAACCCATACGAGCAACCTTTTCAACCATGTCTATTGGATGATTCTGCAGAGACTGTGGTCCTAAATGATGAAGCACCATGGGAGCACTAGACTGGGCTTGTTGAGGAAGGACAGCAACAACAGTAGCAGCATTGTTGGACGGATTTCCATAAGCAGTGTTATAGGCCTGGGCATTCCCCTGTACTGTATATGAGGCAACACCATGTAGGCTGACCTTGCTTGGTTTAAATGAGCCATTACCAAACGATTGAAGTTGCGGTGGCTGCTGAGACTGGATGCTATGCTCAGCCAGTGGGACTGAAATTGTGTTGCTTTGCACATAAACAGGAGCGACTTCATGATGAT]
[+] EMBL CB660222             [            AAAACAACAA ATTTCTCA TATCTTCGTATTGCCAACATGC GTATGCAAGTCCACAAAA GGTTACAAGCATATATGTCCATTAAAAGGTAGGACACATGCCAACAATCATCATCTTAACTAAACTAGCAGTATTATTTCATCACAATCCTCCAGCTGAAAAAAATAAGCTGCAGGATATGTACCAATCTGC TGGC TGTTTAAAAAGATGCCAGACGAAATACCTTAGCAAAGCTGAAAAGCTTCCCA TGATAGTAAGATATCATAATATTTCACAGGAACAAGCCAACAAACCACA TGCA GCGGTTCCAAAC T GGCT T GTTCATTCTC   CTACTC GCCACCTCATCGCCACCAGAGATCTGCTTGTCAAGCGAGGTGTTTGAACTCTACATTCTG TCCAGCAGTAGCCA TTCGAAGTGCCATGCTCTCAGCTTGATCCTTAAAGTAACCCATACGAGCAACCTTTTCAACCATGTCTATTGGATGATTCTGCAGAGACTGTGGTCCTAAATGATGAAGCACCATGGGAGCACTAGACTGGGCTTGTTGAGGAAGGACAGCAACAACAGTAGCAGCATTGTTGGACGGATTTCCATAAGCAGTGTTATAGGCCTGGGCATTCCCCTGTACTGTATATGAGGCAACACCATGTAGGCTGACCTTGCTTGGTTTAAATGAGCCATTACCAAACGATTGAAGTTGCGGTGGCTGCTGAGACTGGATGCTATGCTCAGCCAGTGGGACTGAAATTGTGTTGCTTTGCACATAAACAGGAGCGACTTCATGATGAT]
[+] EMBL CB660340             [            AAAACAACAA ATTTCTCA TATCTTCGTATTGC CCCTTGC GTATGCAAGTCCACAAAA GGTTACAAGCATATATGTCCATTAAAAGGTAGGACACATGCCAACAATCATCATCTTAACTAAACTAGCAGTATTATTTCATCACAATCCTCCAGCTGAAAAAAATAAGCTGCAGGATATGTACCAATCTGC TGGC TGTTTAAAAAGATGCCAGACGAAATACCTTAGCAAAGCTGAAAAGCTTCCCA TGATAGTAAGATATCATAATATTTCACAGGAACAAGCCAACAAACCACA TGCA GCGGTTCCAAAC T GGCT T GTTCATTCTC   CTACTC GCCACCTCATCGCCACCAGAGATCTGCTTGTCAAGCGAGGTGTTTGAACTCTACATTCTG TCCAGCAGTAGCCA TTCGAAGTGCCATGCTCTCAGCTTGATCCTTAAAGTAACCCATACGAGCAACCTTTTCAACCATGTCTATTGGATGATTCTGCAGAGACTGTGGTCCTAAATGATGAAGCACCATGGGAGCACTAGACTGGGCTTGTTGAGGAAGGACAGCAACAACAGTAGCAGCATTGTTGGACGGATTTCCATAAGCAGTGTTATAGGCCTGGGCATTCCCCTGTACTGTATATGAGGCAACACCATGTAGGCTGACCTTGCTTGGTTTAAATGAGCCATTACCAAACGATTGAAGTTGCGGTGGCTGCTGAGACTGGATGCTATGCTCAGCCAGTGGGACTGAAATTGTGTTGCTTTGCACATAAACAGGAGCGACTTCATGATGAT]
[-] EMBL CA766035             [                 AACAA ATTTCTCA TATCTTCGTATTGCAAACATGC GTATGCAAGTCCACAAAA GGTTACAAGCATATATGTCCATTAAAAGGTAGGACACATGCCAACAATCATCATCTTAACTAAACTAGCAGTATTATTTCATCACAATCCTCCAGCTGAAAAAAATAAGCTGCAGGATATGTACCAATCTGC TGGC TGTTTAAAAAGATGCCAGACGAAATACCTTAGCAAAGCTGAAAAGCTTCCCA TGATAGTAAGATATCATAATATTTCACAGGAACAAGCCAACAAACCACA TGCA GCGGTTCCAAAC T GGCT T GTTCATTCTCGG CTACTC GCCACCTCATCGCCACCAGAGATCTGCTTGTCAAGCGAGGTGTTTGAACTCTACATTCTG TCCAGCAGTAGCCA TTCGAAGTGCCATGCTCTCAGCTTGATCCTTAAAGTAACCCATACGAGCAACCTTTTCAACCATGTCTATTGGATGATTCTGCAGAGACTGTGGTCCTAAATGATGAAGCACCATGGGAGCACTAGACTGGGCTTGTTGAGGAAGGACAGCAACAACAGTAGCAGCATTGTTGGACGGATTTCCATAAGCAGTGTTATAG                                                                                                                                                                                     ]
[+] EMBL CB619413             [                    AA ATTTCTCA TATCTTCCTATTGCAAACATGC GTATGCAAGTCCACAAAA GGTTACAAGCATATATGTCCATTAAAAGGGAGGACACATGCCAACAATCATCATCTTAACTAAACTAGCAGTATTATTTCATCACAATCCTCCAGCTGAAAAAAATAAGCTGCAGGATATGTACCAATCTGC TGGC TGTTTAAAAAAATGCCAAACAAAATACCTTAACAAAGCTGAAAAGCTTCCCA TGATAGTAAAATATCATAATATTTCACAGGAACAAGCCAACAAACCACA TGCA GCGGTTCCAAAC T GGCT T GTTCATTCTC   CTACTC GCCACCTCATCGCCACCAAAAATCTGCTTGTCAAGCGAGGTGTTTGAACTCTACATTCTG TCCAACAGTAGCCA TTCCAAGTGCCATGCTCTCAGCTTGATCCTTAAAGTAACCCATACGAACAACCTTTTCAACCATGTCTATTGGATGATTCTGCAAAAACTGTGGTCCTAAATGATGAAGCACCATGGGAGCACTAAACTGGGCTTGTTGAGGAAGGACAGCAACAACAGTAGCAGCATTGTTGGACGGATTTCCATAAACAGTGTTATAGGCCTGGGCATTCCCCTGTACTGTATATGAGGCAACACCATGTAGGCTGA                                                                                                                                    ]
[-] EMBL CB621148             [                     A ATTTCTCA TATCTTCGTATTGCAAACATGC GTATGCAAGTCCACAAAA GGTTACAAGCATATATGTCCATTAAAAGGTAGGACACATGCCAACAATCATCATCTTAACTAAACTAGCAGTATTATTTCATCACAATCCTCCAGCTGAAAAAAATAAGCTGCAGGATATGTACCAATCTGC TGGC TGTTTAAAAAGATGCCAGACGAAATACCTTAGCAAAGCTGAAAAGCTTCCCA TGATAGTAAGATATCATAATATTTCACAGGAACAAGCCAACAAACCACA TGCA GCGGTTCCAAAC T GGCT T GTTCATTCTC   CTACTC GCCACCTCATCGCCACCAGAGATCTGCTTGTCAAGCGAGGTGTTTGAACTCTACATTCTG TCCAGCAGTAGCCA TTCGAAGTGCCATGCTCTCAGCTTGATCCTTAAAGTAACCCATACGAGCAACCTTTTCAACCATGTCTATTGGATGATTCTGCAGAGACTGTGGTCCTAAATGATGAAGCACCATGGGAGCACTAGACTGGGCTTGTTGAGGAAGGACAGCAACAACAGTAGCAGCATTGTTGGACGGATTTCCATAAGCAGTGTTATAG                                                                                                                                                                                     ]
[+] EMBL CB683297             [                        TTTCTCA TATCTTCGTATTCCCTTCATGC GTATGCAAGTCCACAAAA GGTTACAAGCATATATGTCCATTAAAAGGTAGGACACATGCCAACAATCATCATCTTAACTAAACTAGCAGTATTATTTCATCACAATCCTCCAGCTGAAAAAAATAAGCTGCAGGATATGTACCAATCTGC TGGC TGTTTAAAAAGATGCCAGACGAAATACCTTAGCAAAGCTGAAAAGCTTCCCA TGATAGTAAGATATCATAATATTTCACAGGAACAAGCCAACAAACCACA TGCA GCGGTTCCAAAC T GGCT T GTTCATTCTC   CTACTC GCCACCTCATCGCCACCAGAGATCTGCTTGTCAAGCGAGGTGTTTGAACTCTACATTCTG TCCAGCAGTAGCCA TTCGAAGTGCCATGCTCTCAGCTTGATCCTTAAAGTAACCCATACGAGCAACCTTTTCAACCATGTCTATTGGATGATTCTGCAGAGACTGTGGTCCTAAATGATGAAGCACCATGGGAGCACTAGACTGGGCTTGTTGAGGAAGGACAGCAACAACAGTAGCAGCATTGTTGGACGGATTTCCATAAGCAGTGTTATAGGCCTGGGCATTCCCCTGTACTGTATATGAGGCAACACCATGTAGGCTGACCTTGCTTGGTTTAAATGAGCCATTACCAAACGATTGAAGTTGCGGTGGCTGCTGAGACTGGATGCTATGCTCAGCCAGTGGGACTGAAATTGTGTTGCTTTGCACATAAACAGGAGCGACTTCATGATG  ]
[-] EMBL CA999781             [                                                       GTATGCAAGTCCACAAAA GGTTACAAGCATATATGTCCATTAAAAGGTAGGACACATGCCAACAATCATCATCTTAACTAAACTAGCAGTATTATTTCATCACAATCCTCCAGCTGAAAAAAATAAGCTGCAGGATATGTACCAATCTGC TGGC TGTTTAAAAAGATGCCAGACGAAATACCTTAGCAAAGCTGAAAAGCTTCCCA TGATAGTAAGATATCATAATATTTCACAGGAACAAGCCAACAAACCACA TGCA GCGGTTCCAAAC T GGCT T GTTCATTCTC   CTACTC GCCACCTCATCGCCACCAGAGATCTGCTTGTCAAGCGAGGTGTTTGAACTCTACATTCTG TCCAGCAGTAGCCA TTCGAAGTGCCATGCTCTCAGCTTGATCCTTAAAGTAACCCATACGAGCAACCTTTTCAACCATGTCTATTGGATGATTCTGCAGAGACTGTGGTCCTAAATGATGAAGCACCATGGGAGCACTAGACTGGGCTTGTTGAGGAAGGACAGCAACAACAGTAGCAGCATTGTTGGACGGATTTCCATAAGCAGTGTTATAGGCCTGGGCATTCCCCTGTACTGTATATGAGGCAACACCATGTAGGCTGACCTTGCTTGGTTTAAATGAGCCATTACCAAACGATTGAAG                                                                                            ]
[+] EMBL CB619631             [                                                                                AAGCATATATGTCCATTAAAAGGTAGGACACATGCCAACCCTCATCATCTTAACTAAACTAGCAGTATTATTTCATCACAATCCTCCAGCTGAAAAAAATAAGCTGCAGGATATGTACCAATCTGC TGGC TGTTTAAAAAGATGCCAGACGAAATACCTTAGCAAAGCTGAAAAGCTTCCCA TGATAGTAAGATATCATAATATTTCACAGGAACAAGCCAACAAACCACA TGCA GCGGTTCCAAAC T GGCT T GTTCATTCTC   CTACTC GCCACCTCATCGCCACCAGAGATCTGCTTGTCAAGCGAGGTGTTTGAACTCTACATTCTG TCCAGCAGTAGCCA TTCGAAGTGCCATGCTCTCAGCTTGATCCTTAAAGTAACCCATACGAGCAACCTTTTCAACCATGTCTATTGGATGATTCTGCAGAGACTGTGGTCCTAAATGATGAAGCACCATGGGAGCACTAGACTGGGCTTGTTGAGGAAGGACAGCAACAACAGTAGCAGCATTGTTGGACGGATTTCCATAAGCAGTGTTATAGGCCTGGGCATTCCCCTGTACTGTATATGAGGCAACACCATGTACGCTGACCTTGCTTGGTTTAAATGAGCCATTACCAAACGATTGAAGTTGCGGTGGCTGCTGAGAC                                                                         ]
[+] EMBL CB660186             [                                                                                   CATATATGACCATTAAAAGGTAGGACACATGCCAACAATCTTCATCTTAACTAAACTAGCAGTATTATTTCATCACAATCCTCCAGCTGAAAAAAATAATCTGCACGATATGTACCAATCTGC TGGC TGTTTAAAAAGATGCCAGACGAAATACCTTAACAAAGCTGAAAAGCTTCCCA TGATAGTAAGATATCATAATATTCCAGAGGAACAACCCAACAAACCACA TGCA CCGGTTCAAAAG T GGGT T GTTCATTCTC   CTACTC GACACCTCATCGCCACCAGAGATCTGCTTGTCAAGCGAGGTGTTTGAACTCTACATTCTGATCCAGCACAAACCACTTCGAAGTGCCATGCTCTCAGCTTGATCCTTAAAGCAACCCATACGAACAACCTTTTCAACCATGTCTATTGG                                                                                                                                                                                                                                                                                                                    ]


>consensus_13828#0 TCTTTTTTTTTGAAAACAACAAATTTCTCATATCTTCGTATTGCAAACATGCGTATGCAA GTCCACAAAAGGTTACAAGCATATATGTCCATTAAAAGGTAGGACACATGCCAACAATCA TCATCTTAACTAAACTAGCAGTATTATTTCATCACAATCCTCCAGCTGAAAAAAATAAGC TGCAGGATATGTACCAATCTGCTGGCTGTTTAAAAAGATGCCAGACGAAATACCTTAGCA AAGCTGAAAAGCTTCCCATGATAGTAAGATATCATAATATTTCACAGGAACAAGCCAACA AACCACATGCAGCGGTTCCAAACTGGCTTGTTCATTCTCCTACTCGCCACCTCATCGCCA CCAGAGATCTGCTTGTCAAGCGAGGTGTTTGAACTCTACATTCTGTCCAGCAGTAGCCAT TCGAAGTGCCATGCTCTCAGCTTGATCCTTAAAGTAACCCATACGAGCAACCTTTTCAAC CATGTCTATTGGATGATTCTGCAGAGACTGTGGTCCTAAATGATGAAGCACCATGGGAGC ACTAGACTGGGCTTGTTGAGGAAGGACAGCAACAACAGTAGCAGCATTGTTGGACGGATT TCCATAAGCAGTGTTATAGGCCTGGGCATTCCCCTGTACTGTATATGAGGCAACACCATG TAGGCTGACCTTGCTTGGTTTAAATGAGCCATTACCAAACGATTGAAGTTGCGGTGGCTG CTGAGACTGGATGCTATGCTCAGCCAGTGGGACTGAAATTGTGTTGCTTTGCACATAAAC AGGAGCGACTTCATGATGAT



consensusID : consensus_13828#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 450
fasta sequence
                              [CTGGCTGTTTAAAAAGATGCCAGACGAAATACCTTAGCAAAGCTGAAAAGCTTCCCATGATAGTAAGATATCATAATATTTCACAGGAACAAGCCAACAAACCACATGCAGCGGTTCCAAACTGGCTTGTTCATTCTCGGCTACTCGCCACCTCATCGCCACCAGAGATCTGCTTGTCAAGCGGGGTGTTTGAACTCTACATTCTGTCCAGCAGTAGCCATTCGAAGTGCCATGCTCTCAGCTTGATCCTTAAAGTAACCCATACGAGCAACCTTTTCAACCATGTCTATTGGATGATTCTGCAGAGACTGTGGTCCTAAATGATGAAGCACCATGGGAGCACTAGACTGGGCTTTGTTGAGGAAGGACAGCAACAACAGTAGCACATTGTTGGACGGATTTTCATAAGCAGTGGTATAGGCCTGGGCATTTCCCTGTACCTGCCCGGCG]

[+] EMBL BI118692             [CTGGCTGTTTAAAAAGATGCCAGACGAAATACCTTAGCAAAGCTGAAAAGCTTCCCATGATAGTAAGATATCATAATATTTCACAGGAACAAGCCAACAAACCACATGCAGCGGTTCCAAACTGGCTTGTTCATTCTCGGCTACTCGCCACCTCATCGCCACCAGAGATCTGCTTGTCAAGCGGGGTGTTTGAACTCTACATTCTGTCCAGCAGTAGCCATTCGAAGTGCCATGCTCTCAGCTTGATCCTTAAAGTAACCCATACGAGCAACCTTTTCAACCATGTCTATTGGATGATTCTGCAGAGACTGTGGTCCTAAATGATGAAGCACCATGGGAGCACTAGACTGGGCTTTGTTGAGGAAGGACAGCAACAACAGTAGCACATTGTTGGACGGATTTTCATAAGCAGTGGTATAGGCCTGGGCATTTCCCTGTACCTGCCCGGCG]


>consensus_13828#1 CTGGCTGTTTAAAAAGATGCCAGACGAAATACCTTAGCAAAGCTGAAAAGCTTCCCATGA TAGTAAGATATCATAATATTTCACAGGAACAAGCCAACAAACCACATGCAGCGGTTCCAA ACTGGCTTGTTCATTCTCGGCTACTCGCCACCTCATCGCCACCAGAGATCTGCTTGTCAA GCGGGGTGTTTGAACTCTACATTCTGTCCAGCAGTAGCCATTCGAAGTGCCATGCTCTCA GCTTGATCCTTAAAGTAACCCATACGAGCAACCTTTTCAACCATGTCTATTGGATGATTC TGCAGAGACTGTGGTCCTAAATGATGAAGCACCATGGGAGCACTAGACTGGGCTTTGTTG AGGAAGGACAGCAACAACAGTAGCACATTGTTGGACGGATTTTCATAAGCAGTGGTATAG GCCTGGGCATTTCCCTGTACCTGCCCGGCG



consensusID : consensus_13828#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 185
fasta sequence
                              [TCATAATCTTCGTATGGAAACATGCGTATGCAAGTCCNCAAAAGGTTACANGCCTATATGTCCNTTAAAAGGNGGACACATGCCAACCAATCATCATCTTAACTAAACTAGCAGTATTATTTCATCACAATCCTCCCAGCTGAAAACAAATAAGCTGAGGATATGTAACCCAANNCTGCGGGCNT]

[-] EMBL BI806052             [TCATAATCTTCGTATGGAAACATGCGTATGCAAGTCCNCAAAAGGTTACANGCCTATATGTCCNTTAAAAGGNGGACACATGCCAACCAATCATCATCTTAACTAAACTAGCAGTATTATTTCATCACAATCCTCCCAGCTGAAAACAAATAAGCTGAGGATATGTAACCCAANNCTGCGGGCNT]


>consensus_13828#2 TCATAATCTTCGTATGGAAACATGCGTATGCAAGTCCNCAAAAGGTTACANGCCTATATG TCCNTTAAAAGGNGGACACATGCCAACCAATCATCATCTTAACTAAACTAGCAGTATTAT TTCATCACAATCCTCCCAGCTGAAAACAAATAAGCTGAGGATATGTAACCCAANNCTGCG GGCNT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13828#0      TCTTTTTTTTTGAAAACAACAAATTTCTCATATCTTCGTATTGCAAACATGCGTATGCAA 60
consensus_13828#1      ------------------------------------------------------------
consensus_13828#2      ------------------------------------------------------------
                                                                                   

consensus_13828#0      GTCCACAAAAGGTTACAAGCATATATGTCCATTAAAAGGTAGGACACATGCCAACAATCA 120
consensus_13828#1      ------------------------------------------------------------
consensus_13828#2      ------------------------------------------------------------
                                                                                   

consensus_13828#0      TCATCTTAACTAAACTAGCAGTATTATTTCATCACAATCCTCCAGCTGAAAAAAATAAGC 180
consensus_13828#1      ------------------------------------------------------------
consensus_13828#2      ------------------------------------------------------------
                                                                                   

consensus_13828#0      TGCAGGATATGTACCAATCTGCTGGCTGTTTAAAAAGATGCCAGACGAAATACCTTAGCA 240
consensus_13828#1      ---------------------CTGGCTGTTTAAAAAGATGCCAGACGAAATACCTTAGCA 39
consensus_13828#2      ------------------------------------------------------------
                                                                                   

consensus_13828#0      AAGCTGAAAAGCTTCCCATGATAGTAAGATATCATAATATTT-CACAGGAACAAGCCAAC 299
consensus_13828#1      AAGCTGAAAAGCTTCCCATGATAGTAAGATATCATAATATTT-CACAGGAACAAGCCAAC 98
consensus_13828#2      -------------------------------TCATAATCTTCGTATGGAAACATGCGTAT 29
                                                      ******* **   *  * **** **  * 

consensus_13828#0      AAACCACATGCAGCGGTTCCAAACTGGCTTGTTCATTCTC--CTACTCGCCACCTCATCG 357
consensus_13828#1      AAACCACATGCAGCGGTTCCAAACTGGCTTGTTCATTCTCGGCTACTCGCCACCTCATCG 158
consensus_13828#2      GCAAGTCCNCAAAAGGTTACANGCCTATATGTCCNTTA------AAAGGNGGACACATGC 83
                         *   *    *  **** **  *     *** * **       *   *    * ***  

consensus_13828#0      CCACCAGAGATCTGCTTGTC-AAGCGAGGTGTTTGAACTC--TACATTCTGTCCAGCAGT 414
consensus_13828#1      CCACCAGAGATCTGCTTGTC-AAGCGGGGTGTTTGAACTC--TACATTCTGTCCAGCAGT 215
consensus_13828#2      CAACCAATCATCATCTTAACTAAACTAGCAGTATTATTTCATCACAATCCTCCCAGCTGA 143
                       * ****   ***  ***  * ** *  *  ** * *  **   *** **   ***** * 

consensus_13828#0      AGCCATTCGAAGTGCCATGCTCTCAGCTTGATCCTTAAAGTAACCCATACGAGCAACCTT 474
consensus_13828#1      AGCCATTCGAAGTGCCATGCTCTCAGCTTGATCCTTAAAGTAACCCATACGAGCAACCTT 275
consensus_13828#2      AAACAAATAAGCTGA-GGATATGTAACCCAANNCTGCGGGCNT----------------- 185
                       *  **    *  **          * *   *  **    *                    

consensus_13828#0      TTCAACCATGTCTATTGGATGATTCTGCAGAGACTGTGGTCCTAAATGATGAAGCACCAT 534
consensus_13828#1      TTCAACCATGTCTATTGGATGATTCTGCAGAGACTGTGGTCCTAAATGATGAAGCACCAT 335
consensus_13828#2      ------------------------------------------------------------
                                                                                   

consensus_13828#0      GGGAGCACTAGACTGGGCTT-GTTGAGGAAGGACAGCAACAACAGTAGCAGCATTGTTGG 593
consensus_13828#1      GGGAGCACTAGACTGGGCTTTGTTGAGGAAGGACAGCAACAACAGTAGCA-CATTGTTGG 394
consensus_13828#2      ------------------------------------------------------------
                                                                                   

consensus_13828#0      ACGGATTTCCATAAGCAGTGTTATAGGCCTGGGCATTCCCCTGTACTGTATATGAGGCAA 653
consensus_13828#1      ACGGATTTTCATAAGCAGTGGTATAGGCCTGGGCATTTCCCTGTACC-TGCCCGGCG--- 450
consensus_13828#2      ------------------------------------------------------------
                                                                                   

consensus_13828#0      CACCATGTAGGCTGACCTTGCTTGGTTTAAATGAGCCATTACCAAACGATTGAAGTTGCG 713
consensus_13828#1      ------------------------------------------------------------
consensus_13828#2      ------------------------------------------------------------
                                                                                   

consensus_13828#0      GTGGCTGCTGAGACTGGATGCTATGCTCAGCCAGTGGGACTGAAATTGTGTTGCTTTGCA 773
consensus_13828#1      ------------------------------------------------------------
consensus_13828#2      ------------------------------------------------------------
                                                                                   

consensus_13828#0      CATAAACAGGAGCGACTTCATGATGAT 800
consensus_13828#1      ---------------------------
consensus_13828#2      ---------------------------
                                                  




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)