These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13836#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 1207 fasta sequence [GAAGGAGTAGATCAGTCCTCGCCTCGGCTCGGCTCCCTCCCACGCTCCAGCTCCGCCTCCAATGGCGCCTATGGCCATCTCCACCCCGCTCGCCCTCCGCGCCTCCCCGACCCGCCTCCTCTCCCGCAGGCGGAGCGGAGCCAAATCAGGCGTGGCTCTCCCAGGTCCACAATTTGTACCACCTGGTATTTCTTCAAAGTTGGACGAGAGGATACATTGTCATTCTTCTCTGAGGAAAAATACAATTGTAGCATCAGAGAATGAAAATCCACCTTTAATGCCTGCCATAATGACTCCTGCTGGTGCTCTTGATCTGGCAACTGTATTGTTGGGGAACCGCATTATCTTCATTGGTCAATATATTAACTCGCAAGTAGCACAGCGTGTAATATCACAGCTTGTCACACTTGCTGCTGTTGATGAAGAGGCTGATATTCTGATCTACCTGAACTGCCCCGGC-GGAAGTCTCTACTCCATCTTAGCAATTTATGATTGCATGTCCTGGATCAAGCCCAAAGTTGGAACAGTGTGCTTT-GGT-GTTGTTGCTAGCCAGGCAGCAATTATACTTGCTGGCGGTGAGAAGGG-AATGCGTTATGCCATGCCAAATGCTAGAGTAATGATTCATCAACCTCAAGGTGTATCAGAGGGTAATGTGGAGGAGGTGAGGCGACAGGTTGGGGAAACCATTTATGCTCGTGATAAAGTTGATAAGATGTTTGCTGCTTTTACTGGGCAAACCTTGGATATGGTACAACAGTGGACAGAGAGGGATCGTTTCATGTCTTCATCTGAAGCCATGGACTTTGGACTAGTTGATGCCCTGCTGGAAACAAGATACTAACAAACAAACACTTAGGCACAGTTTGATTAGCAGAGGCTGGTACAAGGATTGTGAAACTGGAGCTGAAGTTGAGATTTTCGCCGTCCTTCTAGTTCAAGGACTCCAATGACAGGAGGCTGGATCTGCGAGACTTGAATGCATCGCCATCGCTCCTATGAGCAAAACATCTCTGCGTTGAGTGTGATTTTTTGCTCTTCTTTTTTGGATCTGGTTTTACATGCCGCCAGCCTATGGTCTCAATGCATTGGTCCTGCTAATGTTTAGTGTAGACCAGATGATCCTTTAGACAGCAAAACATCAGTTATTACTCCGTAGATTTTCCCATGAGCTGATTCCAGACTGTGTGCAACTTTTGTGTTCCAATTG] [+] EMBL CF333845 [GAAGGAGTAGAAAAGTCCTCGCCTCGGCTCGGCTCCCTCCCACGCTCCAGCTCCGCCTCCAATGGCGCCTATGGCCATCTCCACCCCGCTCGCCCTCCGCGCCTCCCCGACCCGCCTCCTCTCCCGCAGGCGGAGCGGAGCCAAATCAGGCGTGGCTCTCCCAGGTCCACAATTTGTACCACCTGGTATTTCTTCAAAGTTGGACGAGAGGATACATTGTCATTCTTCTCTGAGGAAAAATACAATTGTAGCATCAGAGAATGAAAATCCACCTTTAATGCCTGCCATAATGACTCCTGCTGGTGCTCTTGATCTGGCAACTGTATTGTTGGGGAACCGCATTATCTTCATTGGTCAATATATTAACTCGCAAGTAGCACAGCGTGTAATATCACAGCTTGTCACACTTGCTGCTGTTGATGAAGAGGCTGATATTCTGATCTACCTGAACTGCCCCGGC GGAAGTCTCTACTCCATCTTAGCAATTTATGATTGCATGTCCTGGATCAAGCCCAAAGTTGGAACAGTGTGCTTT GGT GTTGTTGCTAGCCAGGCAGCAATTATACTTGCTGGCGGTGAGAAGGG AATGCGTTATGCCAT ] [+] EMBL AK058696 [ tccTCAGTCCTCGCCTCGGCTCGGCTCCCTCCCACGCTCCAGCTCCGCCTCCAATGGCGCCTATGGCCATCTCCACCCCGCTCGCCCTCCGCGCCTCCCCGACCCGCCTCCTCTCCCGCAGGCGGAGCGGAGCCAAATCAGGCGTGGCTCTCCCAGGTCCACAATTTGTACCACCTGGTATTTCTTCAAAGTTGGACGAGAGGATACATTGTCATTCTTCTCTGAGGAAAAATACAATTGTAGCATCAGAGAATGAAAATCCACCTTTAATGCCTGCCATAATGACTCCTGCTGGTGCTCTTGATCTGGCAACTGTATTGTTGGGGAACCGCATTATCTTCATTGGTCAATATATTAACTCGCAAGTAGCACAGCGTGTAATATCACAGCTTGTCACACTTGCTGCTGTTGATGAAGAGGCTGATATTCTGATCTACCTGAACTGCCCCGGC GGAAGTCTCTACTCCATCTTAGCAATTTATGATTGCATGTCCTGGATCAAGCCCAAAGTTGGAACAGTGTGCTTT GGT GTTGTTGCTAGCCAGGCAGCAATTATACTTGCTGGCGGTGAGAAGGG AATGCGTTATGCCATGCCAAATGCTAGAGTAATGATTCATCAACCTCAAGGTGTATCAGAGGGTAATGTGGAGGAGGTGAGGCGACAGGTTGGGGAAACCATTTATGCTCGTGATAAAGTTGATAAGATGTTTGCTGCTTTTACTGGGCAAACCTTGGATATGGTACAACAGTGGACAGAGAGGGATCGTTTCATGTCTTCATCTGAAGCCATGGACTTTGGACTAGTTGATGCCCTGCTGGAAACAAGATACTAACAAACAAACACTTAGGCACAGTTTGATTAGCAGAGGCTGGTACAAGGATTGTGAAACTGGAGCTGAAGTTGAGATTTTCGCCGTCCTTCTAGTTCAAGGACTCCAATGACAGGAGGCTGGATCTGCGAGACTTGAATGCATCGCCATCGCTCCTATGAGCAAAACATCTCTGCGTTGAGTGTGATTTTTTGCTCTTCTTTTTTGGATCTGGTTTTACATGCCGCCAGCCTATGGTCTCAATGCATTGGTCCTGCTAATGTTTAGTGTAGACCAGATGATCCTTTAGACAGCAAAACATCAGTTATTACTCCGTAGATTTTCCCATGAGCTGATTCCAGACTGTGTGCAACTTTTGTGTTCCAATTG] [+] EMBL CF338516 [ TCAGTCCTCGCCTCGGCTCGGCTCCCTCCCACGCTCCAGCTCCGCCTCCAATGGCGCCTATGGCCATCTCCACCCCGCTCGCCCTCCGCGCCTCCCCGACCCGCCTCCTCTCCCGCAGGCGGAGCGGAGCCAAATCAGGCGTGGCTCTCCCAGGTCCACAATTTGTACCACCTGGTATTTCTTCAAAGTTGGACGAGAGGATACATTGTCATTCTTCTCTGAGGAAAAATACAATTGTAGCATCAGAGAATGAAAATCCACCTTTAATGCCTGCCATAATGACTCCTGCTGGTGCTCTTGATCTGGCAACTGTATTGTTGGGGAACCGCATTATCTTCATTGGTCAATATATTAACTCGCAAGTAGCACAGCGTGTAATATCACAGCTTGTCACACTTGCTGCTGTTGATGAAGAGGCTGATATTCTGATCTACCTGAACTGCCCCGGC GGAAGTCTCTACTCCATCTTAGCAATTTATGATTGCATGTCCTGGATCAAGCCCAAAGTTG ] [+] EMBL CF339487 [ TCAGTCCTCGCCTCGGCTCGGCTCCCTCCCACGCTCCAGCTCCGCCTCCAATGGCGCCTATGGCCATCTCCACCCCGCTCGCCCTCCGCGCCTCCCCGACCCGCCTCCTCTCCCGCAGGCGGAGCGGAGCCAAATCAGGCGTGGCTCTCCCAGGTCCACAATTTGTACCACCTGGTATTTCTTCAAAGTTGGACGAGAGGATACATTGTCATTCTTCTCTGAGGAAAAATACAATTGTAGCATCAGAGAATGAAAATCCACCTTTAATGCCTGCCATAATGACTCCTGCTGGTGCTCTTGATCTGGCAACTGTATTGTTGGGGAACCGCATTATCTTCATTGGTCAATATATTAACTCGCAAGTAGCACAGCGTGTAATATCACAGCTTGTCACACTTGCTGCTGTTGATGAAGAGGCTGATATTCTGATCTACCTGAACTGCCCCGGC GGAAGTCTCTACTCCATCTTAGCAATTTATGATTGCATGTCCTGGATCAAGCCCAAAGTTGGAACAGTGTGCTTT GGT GTTGTTGCTAGCCAGGCAGCAATTATACTTGCTGGCGGTGAGAAGGG AATGCGTTATGCCATGCCAAATGCTAGAGTAATGATTCATCAACCTC ] [+] EMBL CF339998 [ TCAGTCCTCGCCTCGGCTCGGCTCCCTCCCACGCTCCAGCTCCGCCTCCAATGGCGCCTATGGCCATCTCCACCCCGCTCGCCCTCCGCGCCTCCCCGACCCGCCTCCTCTCCCGCAGGCGGAGCGGAGCCAAATCAGGCGTGGCTCTCCCAGGTCCACAATTTGTACCACCTGGTATTTCTTCAAAGTTGGACGAGAGGATACATTGTCATTCTTCTCTGAGGAAAAATACAATTGTAGCATCAGAGAATGAAAATCCACCTTTAATGCCTGCCATAATGACTCCTGCTGGTGCTCTTGATCTGGCAACTGTATTGTTGGGGAACCGCATTATCTTCATTGGTCAATATATTAACTCGCAAGTAGCACAGCGTGTAATATCACAGCTTGTCACACTTGCTGCTGTTGATGAAGAGGCTGATATTCTGATCTACCTGAACTGCCCCGGC GGAAGTCTCTACTCCATCTTAGCAATTTATGATTGCATGTCCTGGATCAAGCCCAAAGTTGGAACAGTGTGCTTTGGGT GTTGTTGCTAGCCAGGCAGCAATTATACTTGCTGGCGGTGAGAAGGGAAATGCG TATGCCATGCCAAATGCTAGAGTAATGATT ] [+] EMBL CF339894 [ TCAGTCCTCGCCTCGGCTCGGCTCCCTCCCACGCTCCAGCTCCGCCTCCAATGGCGCCTATGGCCATCTCCACCCCGCTCGCCCTCCGCGCCTCCCCGACCCGCCTCCTCTCCCGCAGGCGGAGCGGAGCCAAATCAGGCGTGGCTCTCCCAGGTCCACAATTTGTACCACCTGGTATTTCTTCAAAGTTGGACGAGAGGATACATTGTCATTCTTCTCTGAGGAAAAATACAATTGTAGCATCAGAGAATGAAAATCCACCTTTAATGCCTGCCATAATGACTCCTGCTGGTGCTCTTGATCTGGCAACTGTATTGTTGGGGAACCGCATTATCTTCATTGGTCAATATATTAACTCGCAAGTAGCACAGCGTGTAATATCACAGCTTGTCACACTTGCTGCTGTTGATGAAGAGGCTGATATTCTGATCTACCTGAACTGCCCCGGC GGAAGTCTCTACTCCATCTTAGCAATTTATGATTGCATGTCCTGGATCAAGCCCAAAGTTGGAACAGTGTGCTTT GGTGGTTGTTGCTAGCCAGGCAGCAATTATACTTGCTGGCGGTGAGAAGGG AATGCGTTATGCCATGCCAAATGCTAGAGTAATGATT ] [+] EMBL CF339944 [ TCAGTCCTCGCCTCGGCTCGGCTCCCTCCCACGCTCCAGCTCCGCCTCCAATGGCGCCTATGGCCATCTCCACCCCGCTCGCCCTCCGCGCCTCCCCGACCCGCCTCCTCTCCCGCAGGCGGAGCGGAGCCAAATCAGGCGTGGCTCTCCCAGGTCCACAATTTGTACCACCTGGTATTTCTTCAAAGTTGGACGAGAGGATACATTGTCATTCTTCTCTGAGGAAAAATACAATTGTAGCATCAGAGAATGAAAATCCACCTTTAATGCCTGCCATAATGACTCCTGCTGGTGCTCTTGATCTGGCAACTGTATTGTTGGGGAACCGCATTATCTTCATTGGTCAATATATTAACTCGCAAGTAGCACAGCGTGTAATATCACAGCTTGTCACACTTGCTGCTGTTGATGAAGAGGCTGATATTCTGATCTACCTGAACTGCCCCGGC GGAAGTCTCTACTCCATCTTAGCAATTTATGATTGCATGTCCTGGATCAAGCCCAAAGTTGGAACAGTGTGCTTTGGGT GTTGTTGCTAGCCAGGCAGCAATTATACTTGCTGGCGGTGAGAAGGG AATGCGTTATGCCATGCCAAATGCTAGAGTAATGATT ] [+] EMBL CF339862 [ TCAGTCCTCGCCTCGGCTCGGCTCCCTCCCACGCTCCAGCTCCGCCTCCAATGGCGCCTATGGCCATCTCCACCCCGCTCGCCCTCCGCGCCTCCCCGACCCGCCTCCTCTCCCGCAGGCGGAGCGGAGCCAAATCAGGCGTGGCTCTCCCAGGTCCACAATTTGTACCACCTGGTATTTCTTCAAAGTTGGACGAGAGGATACATTGTCATTCTTCTCTGAGGAAAAATACAATTGTAGCATCAGAGAATGAAAATCCACCTTTAATGCCTGCCATAATGACTCCTGCTGGTGCTCTTGATCTGGCAACTGTATTGTTGGGGAACCGCATTATCTTCATTGGTCAATATATTAACTCGCAAGTAGCACAGCGTGTAATATCACAGCTTGTCACACTTGCTGCTGTTGATGAAGAGGCTGATATTCTGATCTACCTGAACTGCCCCGGC GGAAGTCTCTACTCCATCTTAGCAATTTATGATTGCATGTCCTGGATCAAGCCCAAAGTTGGAACAGTGTGCTTT GGT GTTGTTGCTAGCCAGGCAGCAATTATACTTGCTGGCGGTGAGAAGGG AATGCGTTATGCCATGCCAAATGCTAGAGTAATGATT ] [+] EMBL CF338761 [ TCAGTCCTCGCCTCGGCTCGGCTCCCTCCCACGCTCCAGCTCCGCCTCCAATGGCGCCTATGGCCATCTCCACCCCGCTCGCCCTCCGCGCCTCCCCGACCCGCCTCCTCTCCCGCAGGCGGAGCGGAGCCAAATCAGGCGTGGCTCTCCCAGGTCCACAATTTGTACCACCTGGTATTTCTTCAAAGTTGGACGAGAGGATACATTGTCATTCTTCTCTGAGGAAAAATACAATTGTAGCATCAGAGAATGAAAATCCACCTTTAATGCCTGCCATAATGACTCCTGCTGGTGCTCTTGATCTGGCAACTGTATTGTTGGGGAACCGCATTATCTTCATTGGTCAATATATTAACTCGCAAGTAGCACAGCGTGTAATATCACAGCTTGTCACACTTGCTGCTGTTGATGAAGAGGCTGATATTCTGATCTACCTGAACTGCCCCGGC GGAAGTCTCTACTCCATCTTAGCAATTTATGATTGCATGTCCTGGATCAAGCCCAAAGTTGGAACAG ] [+] EMBL CF339404 [ TCAGTCCTCGCCTCGGCTCGGCTCCCTCCCACGCTCCAGCTCCGCCTCCAATGGCGCCTATGGCCATCTCCACCCCGCTCGCCCTCCGCGCCTCCCCGACCCGCCTCCTCTCCCGCAGGCGGAGCGGAGCCAAATCAGGCGTGGCTCTCCCAGGTCCACAATTTGTACCACCTGGTATTTCTTCAAAGTTGGACGAGAGGATACATTGTCATTCTTCTCTGAGGAAAAATACAATTGTAGCATCAGAGAATGAAAATCCACCTTTAATGCCTGCCATAATGACTCCTGCTGGTGCTCTTGATCTGGCAACTGTATTGTTGGGGAACCGCATTATCTTCATTGGTCAATATATTAACTCGCAAGTAGCACAGCGTGTAATATCACAGCTTGTCACACTTGCTGCTGTTGATGAAGAGGCTGATATTCTGATCTACCTGAACTGCCCCGGCGGGAAGTCTCTACTCCATCTTAGCAATTTATGATTGCATGTCCTGGATCAAGCCCAAAGTTGGAAC ] [+] EMBL CF338689 [ TCAGTCCTCGCCTCGGCTCGGCTCCCTCCCACGCTCCAGCTCCGCCTCCAATGGCGCCTATGGCCATCTCCACCCCGCTCGCCCTCCGCGCCTCCCCGACCCGCCTCCTCTCCCGCAGGCGGAGCGGAGCCAAATCAGGCGTGGCTCTCCCAGGTCCACAATTTGTACCACCTGGTATTTCTTCAAAGTTGGACGAGAGGATACATTGTCATTCTTCTCTGAGGAAAAATACAATTGTAGCATCAGAGAATGAAAATCCACCTTTAATGCCTGCCATAATGACTCCTGCTGGTGCTCTTGATCTGGCAACTGTATTGTTGGGGAACCGCATTATCTTCATTGGTCAATATATTAACTCGCAAGTAGCACAGCGTGTAATATCACAGCTTGTCACACTTGCTGCTGTTGATGAAGAGGCTGATATTCTGATCTACCTGAACTGCCCCGGC GGAAGTCTCTACTCCATCTTAGCAATTTATGATTGCATGTCCTGGATCAAGCCCAAAGTTGG ] [+] EMBL CF338474 [ ttAGTCCTCGCCTCGGCTCGGCTCCCTCCCACGCTCCAGCTCCGCCTCCAATGGCGCCTATGGCCATCTCCACCCCGCTCGCCCTCCGCGCCTCCCCGACCCGCCTCCTCTCCCGCAGGCGGAGCGGAGCCAAATCAGGCGTGGCTCTCCCAGGTCCACAATTTGTACCACCTGGTATTTCTTCAAAGTTGGACGAGAGGATACATTGTCATTCTTCTCTGAGGAAAAATACAATTGTAGCA ] [+] EMBL AK071057 [ GTCCTCGCCTCGGCTCGGCTCCCTCCCACGCTCCAGCTCCGCCTCCAATGGCGCCTATGGCCATCTCCACCCCGCTCGCCCTCCGCGCCTCCCCGACCCGCCTCCTCTCCCGCAGGCGGAGCGGAGCCAAATCAGGCGTGGCTCTCCCAGGTCCACAATTTGTACCACCTGGTATTTCTTCAAAGTTGGACGAGAGGATACATTGTCATTCTTCTCTGAGGAAAAATACAATTGTAGCATCAGAGAATGAAAATCCACCTTTAATGCCTGCCATAATGACTCCTGCTGGTGCTCTTGATCTGGCAACTGTATTGTTGGGGAACCGCATTATCTTCATTGGTCAATATATTAACTCGCAAGTAGCACAGCGTGTAATATCACAGCTTGTCACACTTGCTGCTGTTGATGAAGAGGCTGATATTCTGATCTACCTGAACTGCCCCGGC GGAAGTCTCTACTCCATCTTAGCAATTTATGATTGCATGTCCTGGATCAAGCCCAAAGTTGGAACAGTGTGCTTT GGT GTTGTTGCTAGCCAGGCAGCAATTATACTTGCTGGCGGTGAGAAGGG AATGCGTTATGCCATGCCAAATGCTAGAGTAATGATTCATCAACCTCAAGGTGTATCAGAGGGTAATGTGGAGGAGGTGAGGCGACAGGTTGGGGAAACCATTTATGCTCGTGATAAAGTTGATAAGATGTTTGCTGCTTTTACTGGGCAAACCTTGGATATGGTACAACAGTGGACAGAGAGGGATCGTTTCATGTCTTCATCTGAAGCCATGGACTTTGGACTAGTTGATGCCCTGCTGGAAACAAGATACTAACAAACAAACACTTAGGCACAGTTTGATTAGCAGAGGCTGGTACAAGGATTGTGAAACTGGAGCTGAAGTTGAGATTTTCGCCGTCCTTCTAGTTCAAGGACTCCAATGACAGGAGGCTGGATCTGCGAGACTTGAATGCATCGCCATCGCTCCTATGAGCAAAACATCTCTGCGTTGAGTGTGATTTTTTGCTCTTCTTTTTTGGATCTGGTTTTACATGCCGCCAGCCTATGGTCTCAATGCATTGGTCCTGCTAATGTTTAGTGTAGACCAGATGATCCTTTAGACAGCAAAACATCAGTTATTACTCCGTAGATTTTCCCATGAGCTGATTCCAGACTGTGTGCAACTTTTGTGTTCCAATTG] [-] EMBL CF335571 [ AAAGTTGGAACAGTGTGCTTT GGT GTTGTTGCTAGCCAGGCAGCAATTATACTTGCTGGCGGTGAGAAGGG AATGCGTTATGCCATGCCAAATGCTAGAGTAATGATTCATCAACCTCAAGGTG ATCAGAGGGTAATGTGGAGGAGGTGAGGCGACAGGTTGGGGAAACCATTTATGCTCGTGATAAAGTTGATAAGATGTTTGCTGCTTTTACTGGGCAAACCTTGGATATGGTACAACAGTGGACAGAGAGGGATCGTTTCATGTCTCCATCTGAAGCCATGGACTTTGGACTAGTTGATGCCCTGCTGGAAACAAGATACTAACAAACAAACACTTAGGCACAGTTTGATTAGCAGAGGCTGGTACAAGGATTGTGAAACTGGAGCTGAAGTTGAGATTTTCGCCGTCCTTCTAGTTCAAGGACTCCAATGACAGGAGGCTGGATCTGCGAGACTTGAATGCATCGCCATCGCTCCTATGAGCAAAACATCTCTGCGTTGAGTGTGATTTTTTGCTCTTCTTTTTTGGATCTGGTTTTACATGCCGCCAGCCTATGGTCTCAATGCATTGGTCCTGCTAATGTTTAGTGTAGACCAGATGATCCTTTAGACAGCAAAACATCAGTTATTACTCCGTAGATTTTCCCATGAGCTGATTCaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||