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Oryza sativa
cluster # 13861 cluster # 13861       Sequences # 14       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13861#0 length = 3290 sequences # 10  
consensus_13861#1 length = 704 sequences # 1  
consensus_13861#2 length = 558 sequences # 1  
consensus_13861#3 length = 235 sequences # 2  

consensusID : consensus_13861#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 3290
fasta sequence
                              [AAGAATAATTTCCTTTCGTTCTACTCGCGTCCGGAGAGGCGGATAGTCGGAGACAGCGCGCGTCCCCCTCGCCGCCGCGTCCTCCTCAAGTCTCCGGTGCCATCTCTCCGTGCCTCCTCCCATCGTTGCTGCCACCGCGTCTCCTCCCAATCCCCTCCGTCTCCTCCCCATTCACAGATTGCGGCACACCACTAGGTATAAAGAGATCACAGCATCACCGGTCAGCCCATCCCAAATCCGGCCAGCGCTAACCCCTCGTCGCCAGCCATCACAAAGAGGCGCCCTGGTTCCACGCGGCGGTGGCGGCGGCGAAAGCCATGAAACTCAAATGGAACCATTGAGAGGCCATGTCAGGATTGCTCCAAGCATGCATGCCAGGATCTTCGCTATGCTTTGGCCGATGCACACAAGGTGCTCGATGAAAAGTTTACTTGAGATTGGTCTGCTATTTGATCAGTCCGTGGGAACTCCCCAGCTAGCTAGCTAGCTAGCTTAAACTTGCGATTAATTTAACTCAAGCCATGAAGCGAATAAGCGATGCATTCATCCGTCAGTTGATGATGGCTTTTGGTATGTAGCTTTTGAACTTAATGTGCTTTGGTTTTATGGCTGTGTTTAGTTCAACGCTAAAATTGAAAGTAAAAATTAGAACGATGTGATGGAAAAGTTGAAAGTTTGTGTGTGTAGAAAAGTTCGATATGACGGAAAAGTTGGAAGTTTAAAGAAAAAGTTGGAATCTAAACAAGACCTATATTATATTTTTGTTCTCTTCTGTTGGTGTGTCCTAACATTATTGTCTTCCCTCATTAACTAAATAATTAATACTGGAGTATCATTTTAAATAAGAGAATAGTGATGAACACTTATCAATTATGGTCTAGAAGGAGAAGGCACTGAAATTTTCTGTAACTGATATACATCTTCAAGGAAGAAGCACCAACCTTTTCTACGATTGATAAAACGTATGATTGTTTGTCACATGATAAAGTAACTCACAGAATGCCAATTTACCTATTTTACTACATTGTCAGATTCCATATGCGCATGTACAGCATCACAATGATTCATTTGATGCTCATATTCGGTTTTAGAAATATTGGTAAATTTTCTTTTAGAATAACTCCTATGACTCTAATTGGTCTTTATATTTCACATATTTCATTTTGCTGCTGAAAGCTAGATTGAATTGAAGAGCTGCAAATACAGAAATCCGTATGGATATACATCGGATTTGTTTACTCTTTTATCATACTCCAAACCCAACCTAATTCATTTTTGTTAACTCTGCGAAGTGCACATGGTAGGATAACTTAGGTTCATACACTTTTGAAGTCAGAAATATTTTGTACATCACTTTGTTAGATTTTACTACTCTCTGTCAGTATATGAGTCAGTTCCTCTCATCACCAAGCAGAGATGATTTATAGGTATTGTTTCCAATTTCGTACTGATAACAGTACTTGCGATTATTACTTAAGATAGGCGAGAGAGATACTTCCAACCTATGCAGCGGTGGTTCTAACAATTATTTATTAAGTTCTATGGTATTGTCAATTTTCAAATTTAAAGTAGAATTTCATACCATATATTTTGACTCATGTATACAAGGTTTTCATACGGGTATTTAATGTCGCGCAACGTGCGACTAAGTGGCTAGTCCAGCTGTGACGGGGAATCACGGTCGTATTCCAGCACGAATCTTAACTTCAATCGAACGGCCCACATCGACGCAATGTCAGGAGGGCCAACCGGCCAAGCCCAACTTCCCCCAAAAGCCCTAACGAAATAAACCCTTCCGCCCCCGCCGCCGCCGCCGCCGCCTCGCCGCGGCTCGCATCCCTCTTCCTCTCCCTCTCTTCTTCGCCGGCGCGACGCGACGAGGCGGTAGCTGCCTGCCATGCCGAGGAGAGGTGGAGCGGCGAAGAAGCCGGCGGGCGGCGGCGAGCTGTCCCGCTTCCTGCAGTCGCACCTCCAGACCATCAACGACACCTTCCAGATGATGGCGGAGGCGGCTCCCGGCGGCTTGGAGCGGACGGAGTGGTCTGAGGTCGTCAAGCTCGGCGAGCAAGTCTCCAGGCAGGCCACTGTTGCTGGAATGGTCTGGAGTGGTGATTTGCCTGATGTAGAAACACTCAAGGAGAACATCGTCGCATATTTCAACATCCT-GCAGGGTTTCCTTTTGGGTTGCCACGGCAGCACAGTTGGCGCAGGACCCACACTTCACAAATCCATCTGTAGCTCTGCAAAGAATGTT-GTTGACTCCAGCTTCTCATTGTTCAATCAAGCTGTTTCTGCTTATGAATCACGCAGTCC-TGACCGGAAAACAACTATACCTCAGGTGACAGGAACTGTAT-GGGAAGCATGTC-TTGCTCTCAACAAGGTACCAACAACCAACTGTGTTGCCATAGGACGAGCCATGACTCAGATAGGTGTGTATCTGAAGGATATTCTCCGAGAGATGAAAGAACTACCAATTGGTGATTCTAATGGCACTGCTGAAAAATCTTCTAATGGAGCTGTGGACACCACAAGTTGTTCTGATAGAGATGGATCGTCAAGTGACCTTGAGTTAGATGAGGACTTCACTGAAGAGGAGGTTGCTGTTGCCAAATTGGTTGTCACTGTGGCTTCCGATGCGCTTGTTGTGGTGAAAGAAACAATTCGTTTCATTACTTGTTT-GCTTAAGATCTCAGGT-AACCGAAG-TGGAGCTAATGAGGAAAAAGTTGAGACAATGGAACA-ATTGTTGAGCTGTTGCAGACAGGCTGCTGACCAGATTAACGACCTCGGGGCGTCTGTG-TACCCACCACAAGACTTATCTGAGATGAAATCCTCAGTGAAAAGATTGTATGGTGGCGCCAATGCAATGCGGAGGGAAATCAGGAGCCTTGGTGGCTCACCTGAGGGTGCCTTTGTAGCCCTTGAAAGATTTGAGAAGT-CCCTGGGAGCTCTAGAAGTGGAGATAGCTGATGATGTAGCAAACGAGATGGAAAATCTTACCATTAGCTCGTCCTGATTGCTGGAACTTGAAAGATTTGCCATACCTATATGATAATATGTCCTCTTGTTCGAGCTATAAGCTTTTGTTGTTCAACTAAAACGATGAATATGTATAATCCTTTCCAGTGTGAGATCAAATGCTTATTGCTTAGCCTGCTTTGCTGTTCCTTTCTTTTTGCATCTGGGTGAAGGCAATGTCTTTGTCAAATGCCACAAGACTGACGACATTTCACTCCATTCATTATAAAAGGGACGATATTGACAAGTTCTTTTATCAAAAAAACCTAAAAAGA]

[+] EMBL AK072626             [AAGAATAATTTCCTTTCGTTCTACTCGCGTCCGGAGAGGCGGATAGTCGGAGACAGCGCGCGTCCCCCTCGCCGCCGCGTCCTCCTCAAGTCTCCGGTGCCATCTCTCCGTGCCTCCTCCCATCGTTGCTGCCACCGCGTCTCCTCCCAATCCCCTCCGTCTCCTCCCCATTCACAGATTGCGGCACACCACTAGGTATAAAGAGATCACAGCATCACCGGTCAGCCCATCCCAAATCCGGCCAGCGCTAACCCCTCGTCGCCAGCCATCACAAAGAGGCGCCCTGGTTCCACGCGGCGGTGGCGGCGGCGAAAGCCATGAAACTCAAATGGAACCATTGAGAGGCCATGTCAGGATTGCTCCAAGCATGCATGCCAGGATCTTCGCTATGCTTTGGCCGATGCACACAAGGTGCTCGATGAAAAGTTTACTTGAGATTGGTCTGCTATTTGATCAGTCCGTGGGAACTCCCCAGCTAGCTAGCTAGCTAGCTTAAACTTGCGATTAATTTAACTCAAGCCATGAAGCGAATAAGCGATGCATTCATCCGTCAGTTGATGATGGCTTTTGGTATGTAGCTTTTGAACTTAATGTGCTTTGGTTTTATGGCTGTGTTTAGTTCAACGCTAAAATTGAAAGTAAAAATTAGAACGATGTGATGGAAAAGTTGAAAGTTTGTGTGTGTAGAAAAGTTCGATATGACGGAAAAGTTGGAAGTTTAAAGAAAAAGTTGGAATCTAAACAAGACCTATATTATATTTTTGTTCTCTTCTGTTGGTGTGTCCTAACATTATTGTCTTCCCTCATTAACTAAATAATTAATACTGGAGTATCATTTTAAATAAGAGAATAGTGATGAACACTTATCAATTATGGTCTAGAAGGAGAAGGCACTGAAATTTTCTGTAACTGATATACATCTTCAAGGAAGAAGCACCAACCTTTTCTACGATTGATAAAACGTATGATTGTTTGTCACATGATAAAGTAACTCACAGAATGCCAATTTACCTATTTTACTACATTGTCAGATTCCATATGCGCATGTACAGCATCACAATGATTCATTTGATGCTCATATTCGGTTTTAGAAATATTGGTAAATTTTCTTTTAGAATAACTCCTATGACTCTAATTGGTCTTTATATTTCACATATTTCATTTTGCTGCTGAAAGCTAGATTGAATTGAAGAGCTGCAAATACAGAAATCCGTATGGATATACATCGGATTTGTTTACTCTTTTATCATACTCCAAACCCAACCTAATTCATTTTTGTTAACTCTGCGAAGTGCACATGGTAGGATAACTTAGGTTCATACACTTTTGAAGTCAGAAATATTTTGTACATCACTTTGTTAGATTTTACTACTCTCTGTCAGTATATGAGTCAGTTCCTCTCATCACCAAGCAGAGATGATTTATAGGTATTGTTTCCAATTTCGTACTGATAACAGTACTTGCGATTATTACTTAAGATAGGCGAGAGAGATACTTCCAACCTATGCAGCGGTGGTTCTAACAATTATTTATTAAGTTCTATGGTATTGTCAATTTTCAAATTTAAAGTAGAATTTCATACCATATATTTTGACTCATGTATACAAGGTTTTCATACGGGTATTTAATGTCGCGCAACGTGCGACTAAGTGGCTAGTCCAGCTGTGACGGGGAATCACGGTCGTATTCCAGCACGAATCTTAACTTCAATCGAACGGCCCACATCGACGCAATGTCAGGAGGGCCAACCGGCCAAGCCCAACTTCCCCCAAAAGCCCTAACGAAATAAACCCTTCCGCCCCCGCCGCCGCCGCCGCCGCCTCGCCGCGGCTCGCATCCCTCTTCCTCTCCCTCTCTTCTTCGCCGGCGCGACGCGACGAGGCGGTAGCTGCCTGCCATGCCGAGGAGAGGTGGAGCGGCGAAGAAGCCGGCGGGCGGCGGCGAGCTGTCCCGCTTCCTGCAGTCGCACCTCCAGACCATCAACGACACCTTCCAGATGATGGCGGAGGCGGCTCCCGGCGGCTTGGAGCGGACGGAGTGGTCTGAGGTCGTCAAGCTCGGCGAGCAAGTCTCCAGGCAGGCCAGTGTTGCTGGAATGGTCTGGAGTGGTGATTTGCCTGATGTAGAAACACTCAAGGAGAACATCGTCGCATATTTCAACATCCTGGCAGGGTTTCCTTTTGGGTTGCCACGGCAGCACAGTTGGCGCAGGACCCACACTTCACAAATCCATCTGTAGCTCTGCAAAGAATGTTGGTTGACTCCAGCTTCTCATTGTTCAATCAAGCTGTTTCTGCTTATGAATCACCCACTCC TGACCGGGAAACAACTATACCTCAGGTGACCGG ACTGTAT GGGAAGCATTTC TTGCTCTCAACAAGGTACCCACAACCAACTGTGTTGCCATAGGACGAGCCATGACTCAGATAGGTGTGTATCTGAAGGATATTCTCCGAGAGATGAAAGAACTACCAATTGGTGATTCTAATGGCACTGCTGAAAAATCTTCTAATGGAGCTGTGGACACCACAAGTTGTTCTGATAGAGATGGATCGTCAAGTGACCTTGAGTTAGATGAGGACTTCACTGAAGAGGAGGTTGCTGTTGCCAAATTGGTTGTCACTGTGGCTTCCGATGCGCTTGTTGTGGTGAAAGAAACAATTCGTTTCATTACTTGTTT GCTTAAGATCTCAGGT AACCGAAG TGGAGCTAATGAGGAAAAAGTTGAGACAATGGAACA ATTGTTGAGCTGTTGCAGACAGGCTGCTGACCAGATTAACGACCTCGGGGCGTCTGTG TACCCACCACAAGACTTATCTGAGATGAAATCCTCAGTGAAAAGATTGTATGGTGGCGCCAATGCAATGCGGAGGGAAATCAGGAGCCTTGGTGGCTCACCTGAGGGTGCCTTTGTAGCCCTTGAAAGATTTGAGAAGT CCCTGGGAGCTCTAGAAGTGGAGATAGCTGATGATGTAGCAAACGAGATGGAAAATCTTACCATTAGCTCGTCCTGATTGCTGGAACTTGAAAGATTTGCCATACCTATATGATAATATGTCCTCTTGTTCGAGCTATAAGCTTTTGTTGTTCAACTAAAACGATGAATATGTATAATCCTTTCCAGTGTGAGATCAAATG                                                                                                                                                         ]
[-] EMBL CF315276             [                                                                                                                                                                                                                                                                                                                                                                                                                                  ATGAAAAGTTTACTTGAGATTGGTCTGCTATTTGATCAGTCCGTGGGAACTCCCCAGCTAGCTAGCTAGCTAGCTTAAACTTGCGATTAATTTAACTCAAGCAATGAAGCGAATAAGCGATGCATTCATCCGTCAGTTGATGATGGCTTTTGGTATGTAGCTTTTGAACTTAATGTGCTTTGGTTTTATGGCTGCGTTTAGTTCAACGCTAAAATTGAAAGTAAAAATTAGAACGATGTGATGGAAAAGTTGAAAGTTTGTGTGTGTAGAAAAGTTCGATATGACGGAAAAGTTGGAAGTTTAAAGAAAAAGTTGGAATCTAAACAAGACCTAaaaaa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AK064358             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CCGCCGCCGCCGCCGCCGCCTCGCCGCGGCTCGCATCCCTCTTCCTCTCCCTCTCTTCTTCGCCGGCGCGACGCGACGAGGCGGTAGCTGCCTGCCATGCCGAGGAGAGGTGGAGCGGCGAAGAAGCCGGCGGGCGGCGGCGAGCTGTCCCGCTTCCTGCAGTCGCACCTCCAGACCATCAACGACACCTTCCAGATGATGGCGGAGGCGGCTCCCGGCGGCTTGGAGCGGACGGAGTGGTCTGAGGTCGTCAAGCTCGGCGAGCAAGTCTCCAGGCAGGCCACTGTTGCTGGAATGGTCTGGAGTGGTGATTTGCCTGATGTAGAAACACTCAAGGAGAACATCGTCGCATATTTCAACATCCT GCAGGGTTTCCTTTTGGGTTGCCACGGCAGCACAGTTGGCGCAGGACCCACACTTCACAAATCCATCTGTAGCTCTGCAAAGAATGAT GTTGACTCCAGCTTCTCATTGTTCAATCGAGCTGTTTCTGCTTATGAATCACGCAGTCC TGACCGGAAAACAACTATACCTCAGGTGACAGGAACTGTAT GGGAAGCATGTC TTGCTCTCAACAAGGTACCAACAACCAACTGTGTTGCCATAGGACGAGCCATGACTCAGATAGGTGTGTATCTGAAGGATATTCTCCGAGAGATGAAAGAACTACCAATTGGTGATTCTAATGGCACTGCTGAAAAATCTTCTAATGGAGCTGTGGACACCACAAGTTGTTCTGATAGAGATGGATCGTCAAGTGACCTTGAGTTAGATGAGGACTTCACTGAAGAGGAGGTTGCTGTTGCCAAATTGGTTGTCACTGTGGCTTCCGATGCGCTTGTTGTGGTGAAAGAAACAATTCGTTTCATTACTTGTTT GCTTAAGATCTCAGGT AACCGAAG TGGAGCTAATGAGGAAAAAGTTGAGACAATGGAACA ATTGTTGAGCTGTTGCAGACAGGCTGCTGACCAGATTAACGACCTCGGGGCGTCTGTG TACCCACCACAAGACTTATCTGAGATGAAATCCTCAGTGAAAAGATTGTATGGTGGCGCCAATGCAATGCGGAGGGAAATCAGGAGCCTTGGTGGCTCACCTGAGGGTGCCTTTGTAGCCCTTGAAAGATTTGAGAAGT CCCTGGGAGCTCTAGAAGTGGAGATAGCTGATGATGTAGCAAACGAGATGGAAAATCTTACCATTAGCTCGTCCTGATTGCTGGAACTTGAAAGATTTGCCATACCTATATGATAATATGTCCTCTTGTTCGAGCTATAAGCTTTTGTTGTTCAACTAAAACGATGAATATGTATAATCCTTTCCAGTGTGAGATCAAATGCTTATTGCTTAGCCTGC                                                                                                                                        ]
[+] EMBL CB656080             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CTTCCTCTCCCTCTCTTCTTCGCCGGCGCGACGCGACGAGGCGGTAGCTGCCTGCCATGCCGAGGAGAGGTGGAGCGGCGAAGAAGCCGGCGGGCGGCGGCGAGCTGTCCCGCTTCCTGCAGTCGCACCTCCAGACCATCAACGACACCTTCCAGATGATGGCGGAGGCGGCTCCCGGCGGCTTGGAGCGGACGGAGTGGTCTGAGGTCGTCAAGCTCGGCGAGCAAGTCTCCAGGCAGGCCACTGTTGCTGGAATGGTCTGGAGTGGTGATTTGCCTGATGTAGAAACACTCAAGGAGAACATCGTCGCATATTTCAACATCCT GCAGGGTTTCCTTTTGGGTTGCCACGGCAGCACAGTTGGCGCAGGACCCACACTTCACAAATCCATCTGTAGCTCTGCAAAGAATGTT GTTGACTCCAGCTTCTCATTGTTCAATCAAGCTGTTTCTGCTTATGAATCACGCAGTCC TGACCGGAAAACAACTATACCTCAGGTGACAGGAACTGTAT GGGAAGCATGTC TTGCTCTCAACAAGGTACCAACAACCAACTGTGTTGCCATAGGACGAGCCATGACTCAGATAGGTGTGTATCTGAAGGATATTCTCCGAGAGATGAAAGAACTACCAATTGGTGATTCTAATGGCACTGCTGAAAAATCTTCTAATGGAGCTGTGGACACCACAAGTTGTTCTGATAGAGATGGATCGTCAAGTGACtt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CA882811             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         AGTCGCACCTCCAGACCATCAACGACACCTTCCAGATGATGGCGGAGGCGGCTCCCGGCGGCTTGGAGCGGACGGAGTGGTCTGAGGTCGTCAAGCTCGGCGAGCAAGTCTCCAGGCAGGCCACTGTTGCTGGAATGGTCTGGAGTGGTGATTTGCCTGATGTAGAAACACTCAAGGAGAACATCGTCGCATATTTCAACATCCT GCAGGGTTTCCTTTTGGGTTGCCACGGCAGCACAGTTGGCGCAGGACCCACACTTCACAAATCCATCTGTAGCTCTGCAAAGAATGTT GTTGACTCCAGCTTCTCATTGTTCAATCAAGCTGTTTCTGCTTATGAATCACGCAGTCC TGACCGGAAAACAACTATACCTCAGGTGACAGGAACTGTAT GGGAAGCATGTC TTGCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL OSC755               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CAGATGATGGCGGAGGNGGCTCCCGGCGGCTTGGAGCGGACGGAGTGGTCTGAGGTCGTCAAGCTCGGC ANNAAGTCTCCAGGCAGGCCACTGTTGCTGGAATGGTCTGGAGTGGTGATTTGCCTGATGTAGAAACACTCAAGGAGAACATCGTCGCATATTTCAACATCCT GCAGGGTTTCCTTTTGGGTTGCCACGG AGCACAGTTGGCGCAGGACCCACACTTCACAAATCCATCTGTAGCTCTTCAAAGAATGTT GTTGACTCCAGCTTCTCATTGTTCAATCAAGCTGTTTCTGCTTATGAATCACGCAGTCCTTGACCGGAAAACAACTATACCTCAGGTGACAGGGACTNTATNGGGAAGCATGTCTTTGCTCTNAACAAGGTACCAACAACCAACTNTGTT CCATAGGGCGAGCCATGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AU225113             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         gccgcT GTTGACTCCAGCTTCTCATTGTTCAATCAAGCTGTTTCTGCTTATGAATCACGCAGTCC TGACCGGAAAACAACTATACCTCAGGTGACAGGAACTGTAT GGGAAGCATGTC TTGCTCTCAACAAGGTACCAACAACCAACTGTGTTGCCATAGGACGAGCCATGACTCAGATAGGTGTGTATCTGAAGGATATTCTCCGAGAGATGAAAGAACTACCAATTGGTGATTCTAATGGCACTGCTGAAAAATCTTCTAATGGAGCTGTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CB656081             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GATCGTCAAGTGACTTTGAGTTAGATGAGGACTTCACTGAAGAGGAGGTTGCTGTTGCCAAATTGGTTGTCACTGTGGCTTCCGATGCGCTTGTTGTGGTGAAAGAAACAATTCGTTTCATTACTTGTTT GCTTAAGATCTCAGGT AACCGAAG TGGAGCTAATGAGGAAAAAGTTGAGACAATGGAACA ATTGTTGAGCTGTTGCAGACAGGCTGCTGACCAGATTAACGACCTCGGGGCGTCTGTG TACCCACCACAAGACTTATCTGAGATGAAATCCTCAGTGAAAAGATTGTATGGTGGCGCCAATGCAATGCGGAGGGAAATCAGGAGCCTTGGTGGCTCACCTGAGGGTGCCTTTGTAGCCCTTGAAAGATTTGAGAAGT CCCTGGGAGCTCTAGAAGTGGAGATAGCTGATGATGTAGCAAACGAGATGGAAAATCTTACCATTAGCTCGTCCTGATTGCTGGAACTTGAAAGATTTGCCATACCTATATGATAATATGTCCTCTTGTTCGAGCTATAAGCTTTTGTTGTTCAACTAAAACGATGAATATGTATAATCCTTTCCAGTGTGAGATCAAATGCTTATTGCTTAGCCTGCTTTGCTGTTCCTTTCTTTTTGCATCTGGGTGAAGGCAATGTCTTTGTCAAATGCCACAAGACTGACGACATTTCACTCCATTCATTATAAAAGGGACGATATTGACAAGTTCTTTTATCAAAAAAACCTAAAAAGA]
[+] EMBL BI812850             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GTTTGGCTTAAGATCTCAGGTAAACCGAAGTTGGAGCTAATGAGGAAAAAGTTGAGACAATGGAACACATTTTTGA CTGTTGCAGACAGGCTGCTGACCAGATTAACGACCTCGGGGCGTCTGTGTTACCCACCACAAGACTTATCTGAGATGAAATCCTCAGTGAAAAGATTGTAT GTGGC CCAATGCAATGCGGAGGGAAATCGGGAGCCTTGGTGGCTCACCTGAGGGTGCCTTTGTAGCCCTTGAAAGATTTGAGAAGTCCCCTGGGAGCTCTAGAAGTGGAGATAGCTGATGATGTAGC AACGAGATGGAAAATCTTACCATTAGCTCGTCCTGATTGCTGGAACTTGAAAGATTTGCCATACCTATATGATAATATGTCCTCTTGTTCGAGCTATAAGCTTTTGTTGTTCAACTAAAACGATGAATATGTATAATCCTTTCC GTGTGAGATC AATGCTTATTGCTTAGCCTGCTTTGCTGTTCCTTTCaaaaaa                                                                                                                   ]
[+] EMBL CF329491             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TACCTATATGATAATATGTCCTCTTGTTCGAGCTATAAGCTTTTGTTGTTCAACTAAAACGATGAATATGTATAATCCTTTCCAGTGTGAGATCAAATGCTTATTGCTTAaaaaa                                                                                                                                         ]


>consensus_13861#0 AAGAATAATTTCCTTTCGTTCTACTCGCGTCCGGAGAGGCGGATAGTCGGAGACAGCGCG CGTCCCCCTCGCCGCCGCGTCCTCCTCAAGTCTCCGGTGCCATCTCTCCGTGCCTCCTCC CATCGTTGCTGCCACCGCGTCTCCTCCCAATCCCCTCCGTCTCCTCCCCATTCACAGATT GCGGCACACCACTAGGTATAAAGAGATCACAGCATCACCGGTCAGCCCATCCCAAATCCG GCCAGCGCTAACCCCTCGTCGCCAGCCATCACAAAGAGGCGCCCTGGTTCCACGCGGCGG TGGCGGCGGCGAAAGCCATGAAACTCAAATGGAACCATTGAGAGGCCATGTCAGGATTGC TCCAAGCATGCATGCCAGGATCTTCGCTATGCTTTGGCCGATGCACACAAGGTGCTCGAT GAAAAGTTTACTTGAGATTGGTCTGCTATTTGATCAGTCCGTGGGAACTCCCCAGCTAGC TAGCTAGCTAGCTTAAACTTGCGATTAATTTAACTCAAGCCATGAAGCGAATAAGCGATG CATTCATCCGTCAGTTGATGATGGCTTTTGGTATGTAGCTTTTGAACTTAATGTGCTTTG GTTTTATGGCTGTGTTTAGTTCAACGCTAAAATTGAAAGTAAAAATTAGAACGATGTGAT GGAAAAGTTGAAAGTTTGTGTGTGTAGAAAAGTTCGATATGACGGAAAAGTTGGAAGTTT AAAGAAAAAGTTGGAATCTAAACAAGACCTATATTATATTTTTGTTCTCTTCTGTTGGTG TGTCCTAACATTATTGTCTTCCCTCATTAACTAAATAATTAATACTGGAGTATCATTTTA AATAAGAGAATAGTGATGAACACTTATCAATTATGGTCTAGAAGGAGAAGGCACTGAAAT TTTCTGTAACTGATATACATCTTCAAGGAAGAAGCACCAACCTTTTCTACGATTGATAAA ACGTATGATTGTTTGTCACATGATAAAGTAACTCACAGAATGCCAATTTACCTATTTTAC TACATTGTCAGATTCCATATGCGCATGTACAGCATCACAATGATTCATTTGATGCTCATA TTCGGTTTTAGAAATATTGGTAAATTTTCTTTTAGAATAACTCCTATGACTCTAATTGGT CTTTATATTTCACATATTTCATTTTGCTGCTGAAAGCTAGATTGAATTGAAGAGCTGCAA ATACAGAAATCCGTATGGATATACATCGGATTTGTTTACTCTTTTATCATACTCCAAACC CAACCTAATTCATTTTTGTTAACTCTGCGAAGTGCACATGGTAGGATAACTTAGGTTCAT ACACTTTTGAAGTCAGAAATATTTTGTACATCACTTTGTTAGATTTTACTACTCTCTGTC AGTATATGAGTCAGTTCCTCTCATCACCAAGCAGAGATGATTTATAGGTATTGTTTCCAA TTTCGTACTGATAACAGTACTTGCGATTATTACTTAAGATAGGCGAGAGAGATACTTCCA ACCTATGCAGCGGTGGTTCTAACAATTATTTATTAAGTTCTATGGTATTGTCAATTTTCA AATTTAAAGTAGAATTTCATACCATATATTTTGACTCATGTATACAAGGTTTTCATACGG GTATTTAATGTCGCGCAACGTGCGACTAAGTGGCTAGTCCAGCTGTGACGGGGAATCACG GTCGTATTCCAGCACGAATCTTAACTTCAATCGAACGGCCCACATCGACGCAATGTCAGG AGGGCCAACCGGCCAAGCCCAACTTCCCCCAAAAGCCCTAACGAAATAAACCCTTCCGCC CCCGCCGCCGCCGCCGCCGCCTCGCCGCGGCTCGCATCCCTCTTCCTCTCCCTCTCTTCT TCGCCGGCGCGACGCGACGAGGCGGTAGCTGCCTGCCATGCCGAGGAGAGGTGGAGCGGC GAAGAAGCCGGCGGGCGGCGGCGAGCTGTCCCGCTTCCTGCAGTCGCACCTCCAGACCAT CAACGACACCTTCCAGATGATGGCGGAGGCGGCTCCCGGCGGCTTGGAGCGGACGGAGTG GTCTGAGGTCGTCAAGCTCGGCGAGCAAGTCTCCAGGCAGGCCACTGTTGCTGGAATGGT CTGGAGTGGTGATTTGCCTGATGTAGAAACACTCAAGGAGAACATCGTCGCATATTTCAA CATCCTGCAGGGTTTCCTTTTGGGTTGCCACGGCAGCACAGTTGGCGCAGGACCCACACT TCACAAATCCATCTGTAGCTCTGCAAAGAATGTTGTTGACTCCAGCTTCTCATTGTTCAA TCAAGCTGTTTCTGCTTATGAATCACGCAGTCCTGACCGGAAAACAACTATACCTCAGGT GACAGGAACTGTATGGGAAGCATGTCTTGCTCTCAACAAGGTACCAACAACCAACTGTGT TGCCATAGGACGAGCCATGACTCAGATAGGTGTGTATCTGAAGGATATTCTCCGAGAGAT GAAAGAACTACCAATTGGTGATTCTAATGGCACTGCTGAAAAATCTTCTAATGGAGCTGT GGACACCACAAGTTGTTCTGATAGAGATGGATCGTCAAGTGACCTTGAGTTAGATGAGGA CTTCACTGAAGAGGAGGTTGCTGTTGCCAAATTGGTTGTCACTGTGGCTTCCGATGCGCT TGTTGTGGTGAAAGAAACAATTCGTTTCATTACTTGTTTGCTTAAGATCTCAGGTAACCG AAGTGGAGCTAATGAGGAAAAAGTTGAGACAATGGAACAATTGTTGAGCTGTTGCAGACA GGCTGCTGACCAGATTAACGACCTCGGGGCGTCTGTGTACCCACCACAAGACTTATCTGA GATGAAATCCTCAGTGAAAAGATTGTATGGTGGCGCCAATGCAATGCGGAGGGAAATCAG GAGCCTTGGTGGCTCACCTGAGGGTGCCTTTGTAGCCCTTGAAAGATTTGAGAAGTCCCT GGGAGCTCTAGAAGTGGAGATAGCTGATGATGTAGCAAACGAGATGGAAAATCTTACCAT TAGCTCGTCCTGATTGCTGGAACTTGAAAGATTTGCCATACCTATATGATAATATGTCCT CTTGTTCGAGCTATAAGCTTTTGTTGTTCAACTAAAACGATGAATATGTATAATCCTTTC CAGTGTGAGATCAAATGCTTATTGCTTAGCCTGCTTTGCTGTTCCTTTCTTTTTGCATCT GGGTGAAGGCAATGTCTTTGTCAAATGCCACAAGACTGACGACATTTCACTCCATTCATT ATAAAAGGGACGATATTGACAAGTTCTTTTATCAAAAAAACCTAAAAAGA



consensusID : consensus_13861#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 704
fasta sequence
                              [AATAATTTCCTTTCGTTCTACTCGCGTCCGGAGAGGCAGATAGTCGGAGACAGCGCGCGTCCCCCTCGCCGCCGCGTCCTCCTCAAGTCTCCGGTGCCATCTCTCCGTGCCTCCTCCCATCGTTGCTGCCACCGCGTCTCCTCCCAATCCCCTCCGTCTCCTCCCCATTCACAGATTGCGGCACACCACTAGGTATAAAGAGATCACAGCATCACCGGTCAGCCCATCCCAAATCCGGCCAGCGCTAACCCCTCGTCGCCAGCCATCACAAAGAGGCGCCCTGGTTCCACGCGGCGGTGGCGGCGGCGAAAGCCATGAAGCTCAAATGGAACCATTGAGGTCAGTGCCATGTAGACTCACAGCAGTGGCGGCGGCTGCCCATGGAGCTCGATGGGGTCGTAGTAGTGGTCCGTGTAGATGCGGCTGTGGCCCATGTAGAGCATGCTCCGGCGACCCCATAGATGCTTAGGCCTTCTAGCTGTGCGCCACCACATCCTTATTCTTCTCTCTGCAGAGGCCATGTCAGGATTGCTCCAAGCATGCATGCCAGGATCTTCGCTATGCTTTGGCCGATGCACACAAGGTGCTCGATGAAAAGTTTACTTGAGATTGGTCTGCTATTTGATCAGTCCGTGGGAACTCCCCAGCTAGCTAGCTAGCTAGCTTAAACTTGCGATTAATTTAACTCAAGCAATGAAGCGAAT]

[+] EMBL CF315275             [AATAATTTCCTTTCGTTCTACTCGCGTCCGGAGAGGCAGATAGTCGGAGACAGCGCGCGTCCCCCTCGCCGCCGCGTCCTCCTCAAGTCTCCGGTGCCATCTCTCCGTGCCTCCTCCCATCGTTGCTGCCACCGCGTCTCCTCCCAATCCCCTCCGTCTCCTCCCCATTCACAGATTGCGGCACACCACTAGGTATAAAGAGATCACAGCATCACCGGTCAGCCCATCCCAAATCCGGCCAGCGCTAACCCCTCGTCGCCAGCCATCACAAAGAGGCGCCCTGGTTCCACGCGGCGGTGGCGGCGGCGAAAGCCATGAAGCTCAAATGGAACCATTGAGGTCAGTGCCATGTAGACTCACAGCAGTGGCGGCGGCTGCCCATGGAGCTCGATGGGGTCGTAGTAGTGGTCCGTGTAGATGCGGCTGTGGCCCATGTAGAGCATGCTCCGGCGACCCCATAGATGCTTAGGCCTTCTAGCTGTGCGCCACCACATCCTTATTCTTCTCTCTGCAGAGGCCATGTCAGGATTGCTCCAAGCATGCATGCCAGGATCTTCGCTATGCTTTGGCCGATGCACACAAGGTGCTCGATGAAAAGTTTACTTGAGATTGGTCTGCTATTTGATCAGTCCGTGGGAACTCCCCAGCTAGCTAGCTAGCTAGCTTAAACTTGCGATTAATTTAACTCAAGCAATGAAGCGAAT]


>consensus_13861#1 AATAATTTCCTTTCGTTCTACTCGCGTCCGGAGAGGCAGATAGTCGGAGACAGCGCGCGT CCCCCTCGCCGCCGCGTCCTCCTCAAGTCTCCGGTGCCATCTCTCCGTGCCTCCTCCCAT CGTTGCTGCCACCGCGTCTCCTCCCAATCCCCTCCGTCTCCTCCCCATTCACAGATTGCG GCACACCACTAGGTATAAAGAGATCACAGCATCACCGGTCAGCCCATCCCAAATCCGGCC AGCGCTAACCCCTCGTCGCCAGCCATCACAAAGAGGCGCCCTGGTTCCACGCGGCGGTGG CGGCGGCGAAAGCCATGAAGCTCAAATGGAACCATTGAGGTCAGTGCCATGTAGACTCAC AGCAGTGGCGGCGGCTGCCCATGGAGCTCGATGGGGTCGTAGTAGTGGTCCGTGTAGATG CGGCTGTGGCCCATGTAGAGCATGCTCCGGCGACCCCATAGATGCTTAGGCCTTCTAGCT GTGCGCCACCACATCCTTATTCTTCTCTCTGCAGAGGCCATGTCAGGATTGCTCCAAGCA TGCATGCCAGGATCTTCGCTATGCTTTGGCCGATGCACACAAGGTGCTCGATGAAAAGTT TACTTGAGATTGGTCTGCTATTTGATCAGTCCGTGGGAACTCCCCAGCTAGCTAGCTAGC TAGCTTAAACTTGCGATTAATTTAACTCAAGCAATGAAGCGAAT



consensusID : consensus_13861#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 558
fasta sequence
                              [GTTCTGTTGCCAAATTGGTTGTCACTGTGGCTTCCGATGCCTTGTTTTTGGTGAAAGAAACCATTCGTTTCATTACTTGTTTGCTTAAGATCTCAGGTAACCGAAGTGGAGCTAATGAGGAAAAAGTTGAGACCATGGAACACATTGTTGAGCTGTTGCAGACAGGCTGCTGACCAGATTAACGACCTCGGGGCGTCTGTGTACCCACCACAAGACTTATCTGAGATGAAATCCTCAGTGAAAAGATTGTATGTGGCCCAATGCAATGCGGAGGGAAATCGGGACCTTGGTGGCTCACCTGAGGGTGCCTTTGTAGCCCTTGAAAGATTTGAGAAGTCCCTGGGAGCTCTAGAAGTGGAGATACTGATGATGTAGCAAACGAGATGGAAAATCTCCCTAGCTCGTCCTGATTGCTGGAACTTGAAAGATTTGCCATACCTATATGATAATATGTCCTCTTGTTCGAGCTATAAGCTTTTGTTGTTCAACTAAAACGATGAATATGTATAATCCTTTCCAGTGTGGAGATCAAATGCTTATTTCCCCCCAAAAAAAAAA]

[+] EMBL BI812898             [GTTCTGTTGCCAAATTGGTTGTCACTGTGGCTTCCGATGCCTTGTTTTTGGTGAAAGAAACCATTCGTTTCATTACTTGTTTGCTTAAGATCTCAGGTAACCGAAGTGGAGCTAATGAGGAAAAAGTTGAGACCATGGAACACATTGTTGAGCTGTTGCAGACAGGCTGCTGACCAGATTAACGACCTCGGGGCGTCTGTGTACCCACCACAAGACTTATCTGAGATGAAATCCTCAGTGAAAAGATTGTATGTGGCCCAATGCAATGCGGAGGGAAATCGGGACCTTGGTGGCTCACCTGAGGGTGCCTTTGTAGCCCTTGAAAGATTTGAGAAGTCCCTGGGAGCTCTAGAAGTGGAGATACTGATGATGTAGCAAACGAGATGGAAAATCTCCCTAGCTCGTCCTGATTGCTGGAACTTGAAAGATTTGCCATACCTATATGATAATATGTCCTCTTGTTCGAGCTATAAGCTTTTGTTGTTCAACTAAAACGATGAATATGTATAATCCTTTCCAGTGTGGAGATCAAATGCTTATTTCCCCCCAAAAAAAAAA]


>consensus_13861#2 GTTCTGTTGCCAAATTGGTTGTCACTGTGGCTTCCGATGCCTTGTTTTTGGTGAAAGAAA CCATTCGTTTCATTACTTGTTTGCTTAAGATCTCAGGTAACCGAAGTGGAGCTAATGAGG AAAAAGTTGAGACCATGGAACACATTGTTGAGCTGTTGCAGACAGGCTGCTGACCAGATT AACGACCTCGGGGCGTCTGTGTACCCACCACAAGACTTATCTGAGATGAAATCCTCAGTG AAAAGATTGTATGTGGCCCAATGCAATGCGGAGGGAAATCGGGACCTTGGTGGCTCACCT GAGGGTGCCTTTGTAGCCCTTGAAAGATTTGAGAAGTCCCTGGGAGCTCTAGAAGTGGAG ATACTGATGATGTAGCAAACGAGATGGAAAATCTCCCTAGCTCGTCCTGATTGCTGGAAC TTGAAAGATTTGCCATACCTATATGATAATATGTCCTCTTGTTCGAGCTATAAGCTTTTG TTGTTCAACTAAAACGATGAATATGTATAATCCTTTCCAGTGTGGAGATCAAATGCTTAT TTCCCCCCAAAAAAAAAA



consensusID : consensus_13861#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 235
fasta sequence
                              [TAGCTGATGATGTAGCNAACGANATGGAAAATNTTNCCNTTAGCTCGTCCTGATTGCTGGAACTTGAAANATTTGCCATACCTATATGATAATATGTCCTCTTGTTCGAGCTATAAGCTTTTGTTGTTCAACTNAAACGATGAATATGNATAATCCTTTCCAGTGTGAGATCAAATGCTTATTGCTTNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU083468             [TAGCTGATGATGTAGCNAACGANATGGAAAATNTTNCCNTTAGCTCGTCCTGATTGCTGGAACTTGAAANATTTGCCATACCTATATGATAATATGTCCTCTTGTTCGAGCTATAAGCTTTTGTTGTTCAACTNAAACGATGAATATGNATAATCCTTTCCAGTGTGAGATCAAATGCTTATTGCTTNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[-] EMBL CF329490             [                                                                               ACCTATATGATAATATGTCCTCTTGTTCGAGCTATAAGCTTTTGTTGTTCAACTAAAACGATGAATATGTATAATCCTTTCCAGTGTGAGATCAAATGCTTATTGCTTAAAAAAA                                         ]


>consensus_13861#3 TAGCTGATGATGTAGCNAACGANATGGAAAATNTTNCCNTTAGCTCGTCCTGATTGCTGG AACTTGAAANATTTGCCATACCTATATGATAATATGTCCTCTTGTTCGAGCTATAAGCTT TTGTTGTTCAACTNAAACGATGAATATGNATAATCCTTTCCAGTGTGAGATCAAATGCTT ATTGCTTNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13861#2      ------------------------------------------------------------
consensus_13861#3      ------------------------------------------------------------
consensus_13861#0      AAGAATAATTTCCTTTCGTTCTACTCGCGTCCGGAGAGGCGGATAGTCGGAGACAGCGCG 60
consensus_13861#1      ------------------------------------------------------------
                                                                                   

consensus_13861#2      ------------------------------------------------------------
consensus_13861#3      ------------------------------------------------------------
consensus_13861#0      CGTCCCCCTCGCCGCCGCGTCCTCCTCAAGTCTCCGGTGCCATCTCTCCGTGCCTCCTCC 120
consensus_13861#1      ------------------------------------------------------------
                                                                                   

consensus_13861#2      ------------------------------------------------------------
consensus_13861#3      ------------------------------------------------------------
consensus_13861#0      CATCGTTGCTGCCACCGCGTCTCCTCCCAATCCCCTCCGTCTCCTCCCCATTCACAGATT 180
consensus_13861#1      ------------------------------------------------------------
                                                                                   

consensus_13861#2      ------------------------------------------------------------
consensus_13861#3      ------------------------------------------------------------
consensus_13861#0      GCGGCACACCACTAGGTATAAAGAGATCACAGCATCACCGGTCAGCCCATCCCAAATCCG 240
consensus_13861#1      ------------------------------------------------------------
                                                                                   

consensus_13861#2      ------------------------------------------------------------
consensus_13861#3      ------------------------------------------------------------
consensus_13861#0      GCCAGCGCTAACCCCTCGTCGCCAGCCATCACAAAGAGGCGCCCTGGTTCCACGCGGCGG 300
consensus_13861#1      ------------------------------------------------------------
                                                                                   

consensus_13861#2      ------------------------------------------------------------
consensus_13861#3      ------------------------------------------------------------
consensus_13861#0      TGGCGGCGGCGAAAGCCATGAAACTCAAATGGAACCATTGAGAGGCCATGTCAGGATTGC 360
consensus_13861#1      ------------------------------------------------------------
                                                                                   

consensus_13861#2      ------------------------------------------------------------
consensus_13861#3      ------------------------------------------------------------
consensus_13861#0      TCCAAGCATGCATGCCAGGATCTTCGCTATGCTTTGGCCGATGCACACAAGGTGCTCGAT 420
consensus_13861#1      ------------------------------------------------------------
                                                                                   

consensus_13861#2      ------------------------------------------------------------
consensus_13861#3      ------------------------------------------------------------
consensus_13861#0      GAAAAGTTTACTTGAGATTGGTCTGCTATTTGATCAGTCCGTGGGAACTCCCCAGCTAGC 480
consensus_13861#1      ------------------------------------------------------------
                                                                                   

consensus_13861#2      ------------------------------------------------------------
consensus_13861#3      ------------------------------------------------------------
consensus_13861#0      TAGCTAGCTAGCTTAAACTTGCGATTAATTTAACTCAAGCCATGAAGCGAATAAGCGATG 540
consensus_13861#1      ------------------------------------------------------------
                                                                                   

consensus_13861#2      ------------------------------------------------------------
consensus_13861#3      ------------------------------------------------------------
consensus_13861#0      CATTCATCCGTCAGTTGATGATGGCTTTTGGTATGTAGCTTTTGAACTTAATGTGCTTTG 600
consensus_13861#1      ------------------------------------------------------------
                                                                                   

consensus_13861#2      ------------------------------------------------------------
consensus_13861#3      ------------------------------------------------------------
consensus_13861#0      GTTTTATGGCTGTGTTTAGTTCAACGCTAAAATTGAAAGTAAAAATTAGAACGATGTGAT 660
consensus_13861#1      ------------------------------------------------------------
                                                                                   

consensus_13861#2      ------------------------------------------------------------
consensus_13861#3      ------------------------------------------------------------
consensus_13861#0      GGAAAAGTTGAAAGTTTGTGTGTGTAGAAAAGTTCGATATGACGGAAAAGTTGGAAGTTT 720
consensus_13861#1      ------------------------------------------------------------
                                                                                   

consensus_13861#2      ------------------------------------------------------------
consensus_13861#3      ------------------------------------------------------------
consensus_13861#0      AAAGAAAAAGTTGGAATCTAAACAAGACCTATATTATATTTTTGTTCTCTTCTGTTGGTG 780
consensus_13861#1      ------------------------------------------------------------
                                                                                   

consensus_13861#2      ------------------------------------------------------------
consensus_13861#3      ------------------------------------------------------------
consensus_13861#0      TGTCCTAACATTATTGTCTTCCCTCATTAACTAAATAATTAATACTGGAGTATCATTTTA 840
consensus_13861#1      ------------------------------------------------------------
                                                                                   

consensus_13861#2      ------------------------------------------------------------
consensus_13861#3      ------------------------------------------------------------
consensus_13861#0      AATAAGAGAATAGTGATGAACACTTATCAATTATGGTCTAGAAGGAGAAGGCACTGAAAT 900
consensus_13861#1      ------------------------------------------------------------
                                                                                   

consensus_13861#2      ------------------------------------------------------------
consensus_13861#3      ------------------------------------------------------------
consensus_13861#0      TTTCTGTAACTGATATACATCTTCAAGGAAGAAGCACCAACCTTTTCTACGATTGATAAA 960
consensus_13861#1      ------------------------------------------------------------
                                                                                   

consensus_13861#2      ------------------------------------------------------------
consensus_13861#3      ------------------------------------------------------------
consensus_13861#0      ACGTATGATTGTTTGTCACATGATAAAGTAACTCACAGAATGCCAATTTACCTATTTTAC 1020
consensus_13861#1      ------------------------------------------------------------
                                                                                   

consensus_13861#2      ------------------------------------------------------------
consensus_13861#3      ------------------------------------------------------------
consensus_13861#0      TACATTGTCAGATTCCATATGCGCATGTACAGCATCACAATGATTCATTTGATGCTCATA 1080
consensus_13861#1      ------------------------------------------------------------
                                                                                   

consensus_13861#2      ------------------------------------------------------------
consensus_13861#3      ------------------------------------------------------------
consensus_13861#0      TTCGGTTTTAGAAATATTGGTAAATTTTCTTTTAGAATAACTCCTATGACTCTAATTGGT 1140
consensus_13861#1      ------------------------------------------------------------
                                                                                   

consensus_13861#2      ------------------------------------------------------------
consensus_13861#3      ------------------------------------------------------------
consensus_13861#0      CTTTATATTTCACATATTTCATTTTGCTGCTGAAAGCTAGATTGAATTGAAGAGCTGCAA 1200
consensus_13861#1      ------------------------------------------------------------
                                                                                   

consensus_13861#2      ------------------------------------------------------------
consensus_13861#3      ------------------------------------------------------------
consensus_13861#0      ATACAGAAATCCGTATGGATATACATCGGATTTGTTTACTCTTTTATCATACTCCAAACC 1260
consensus_13861#1      ------------------------------------------------------------
                                                                                   

consensus_13861#2      ------------------------------------------------------------
consensus_13861#3      ------------------------------------------------------------
consensus_13861#0      CAACCTAATTCATTTTTGTTAACTCTGCGAAGTGCACATGGTAGGATAACTTAGGTTCAT 1320
consensus_13861#1      ------------------------------------------------------------
                                                                                   

consensus_13861#2      ------------------------------------------------------------
consensus_13861#3      ------------------------------------------------------------
consensus_13861#0      ACACTTTTGAAGTCAGAAATATTTTGTACATCACTTTGTTAGATTTTACTACTCTCTGTC 1380
consensus_13861#1      ------------------------------------------------------------
                                                                                   

consensus_13861#2      ------------------------------------------------------------
consensus_13861#3      ------------------------------------------------------------
consensus_13861#0      AGTATATGAGTCAGTTCCTCTCATCACCAAGCAGAGATGATTTATAGGTATTGTTTCCAA 1440
consensus_13861#1      ------------------------------------------------------------
                                                                                   

consensus_13861#2      ------------------------------------------------------------
consensus_13861#3      ------------------------------------------------------------
consensus_13861#0      TTTCGTACTGATAACAGTACTTGCGATTATTACTTAAGATAGGCGAGAGAGATACTTCCA 1500
consensus_13861#1      ------------------------------------------------------------
                                                                                   

consensus_13861#2      ------------------------------------------------------------
consensus_13861#3      ------------------------------------------------------------
consensus_13861#0      ACCTATGCAGCGGTGGTTCTAACAATTATTTATTAAGTTCTATGGTATTGTCAATTTTCA 1560
consensus_13861#1      ------------------------------------------------------------
                                                                                   

consensus_13861#2      ------------------------------------------------------------
consensus_13861#3      ------------------------------------------------------------
consensus_13861#0      AATTTAAAGTAGAATTTCATACCATATATTTTGACTCATGTATACAAGGTTTTCATACGG 1620
consensus_13861#1      ------------------------------------------------------------
                                                                                   

consensus_13861#2      ------------------------------------------------------------
consensus_13861#3      ------------------------------------------------------------
consensus_13861#0      GTATTTAATGTCGCGCAACGTGCGACTAAGTGGCTAGTCCAGCTGTGACGGGGAATCACG 1680
consensus_13861#1      ------------------------------------------------------------
                                                                                   

consensus_13861#2      ------------------------------------------------------------
consensus_13861#3      ------------------------------------------------------------
consensus_13861#0      GTCGTATTCCAGCACGAATCTTAACTTCAATCGAACGGCCCACATCGACGCAATGTCAGG 1740
consensus_13861#1      ------------------------------------------------------------
                                                                                   

consensus_13861#2      ------------------------------------------------------------
consensus_13861#3      ------------------------------------------------------------
consensus_13861#0      AGGGCCAACCGGCCAAGCCCAACTTCCCCCAAAAGCCCTAACGAAATAAACCCTTCCGCC 1800
consensus_13861#1      ------------------------------------------------------------
                                                                                   

consensus_13861#2      ------------------------------------------------------------
consensus_13861#3      ------------------------------------------------------------
consensus_13861#0      CCCGCCGCCGCCGCCGCCGCCTCGCCGCGGCTCGCATCCCTCTTCCTCTCCCTCTCTTCT 1860
consensus_13861#1      ------------------------------------------------------------
                                                                                   

consensus_13861#2      ------------------------------------------------------------
consensus_13861#3      ------------------------------------------------------------
consensus_13861#0      TCGCCGGCGCGACGCGACGAGGCGGTAGCTGCCTGCCATGCCGAGGAGAGGTGGAGCGGC 1920
consensus_13861#1      ------------------------------------------------------------
                                                                                   

consensus_13861#2      ------------------------------------------------------------
consensus_13861#3      ------------------------------------------------------------
consensus_13861#0      GAAGAAGCCGGCGGGCGGCGGCGAGCTGTCCCGCTTCCTGCAGTCGCACCTCCAGACCAT 1980
consensus_13861#1      ------------------------------------------------------------
                                                                                   

consensus_13861#2      ------------------------------------------------------------
consensus_13861#3      ------------------------------------------------------------
consensus_13861#0      CAACGACACCTTCCAGATGATGGCGGAGGCGGCTCCCGGCGGCTTGGAGCGGACGGAGTG 2040
consensus_13861#1      ------------------------------------------------------------
                                                                                   

consensus_13861#2      ------------------------------------------------------------
consensus_13861#3      ------------------------------------------------------------
consensus_13861#0      GTCTGAGGTCGTCAAGCTCGGCGAGCAAGTCTCCAGGCAGGCCACTGTTGCTGGAATGGT 2100
consensus_13861#1      ------------------------------------------------------------
                                                                                   

consensus_13861#2      ------------------------------------------------------------
consensus_13861#3      ------------------------------------------------------------
consensus_13861#0      CTGGAGTGGTGATTTGCCTGATGTAGAAACACTCAAGGAGAACATCGTCGCATATTTCAA 2160
consensus_13861#1      ------------------------------------------------------------
                                                                                   

consensus_13861#2      ------------------------------------------------------------
consensus_13861#3      ------------------------------------------------------------
consensus_13861#0      CATCCTGCAGGGTTTCCTTTTGGGTTGCCACGGCAGCACAGTTGGCGCAGGACCCACACT 2220
consensus_13861#1      ------------------------------------------------------------
                                                                                   

consensus_13861#2      ------------------------------------------------------------
consensus_13861#3      ------------------------------------------------------------
consensus_13861#0      TCACAAATCCATCTGTAGCTCTGCAAAGAATGTTGTTGACTCCAGCTTCTCATTGTTCAA 2280
consensus_13861#1      ------------------------------------------------------------
                                                                                   

consensus_13861#2      ------------------------------------------------------------
consensus_13861#3      ------------------------------------------------------------
consensus_13861#0      TCAAGCTGTTTCTGCTTATGAATCACGCAGTCCTGACCGGAAAACAACTATACCTCAGGT 2340
consensus_13861#1      ------------------------------------------------------------
                                                                                   

consensus_13861#2      ------------------------------------------------------------
consensus_13861#3      ------------------------------------------------------------
consensus_13861#0      GACAGGAACTGTATGGGAAGCATGTCTTGCTCTCAACAAGGTACCAACAACCAACTGTGT 2400
consensus_13861#1      ------------------------------------------------------------
                                                                                   

consensus_13861#2      ------------------------------------------------------------
consensus_13861#3      ------------------------------------------------------------
consensus_13861#0      TGCCATAGGACGAGCCATGACTCAGATAGGTGTGTATCTGAAGGATATTCTCCGAGAGAT 2460
consensus_13861#1      ------------------------------------------------------------
                                                                                   

consensus_13861#2      ------------------------------------------------------------
consensus_13861#3      ------------------------------------------------------------
consensus_13861#0      GAAAGAACTACCAATTGGTGATTCTAATGGCACTGCTGAAAAATCTTCTAATGGAGCTGT 2520
consensus_13861#1      ---------------------------------------------------------AAT 3
                                                                                   

consensus_13861#2      ------------------------------------------------------------
consensus_13861#3      ------------------------------------------------------------
consensus_13861#0      GGACACCACAAGTTGTTCTGATAGAGATGGATCGTCAAGTGACCTTGAGTTAGATGAGGA 2580
consensus_13861#1      AATTTCCTTTCGTTCTACTCGCGTCCGGAGAGGCAGATAGTCGGAGACAGCGCGCGTCCC 63
                                                                                   

consensus_13861#2      -----------------GTTCTGTTGCCAAATTGGTTGTCACTGTGGCTTCCGATGCCTT 43
consensus_13861#3      ------------------------------------------------------------
consensus_13861#0      CTTCACTGAAGAGGAGGTTGCTGTTGCCAAATTGGTTGTCACTGTGGCTTCCGATGCGCT 2640
consensus_13861#1      CCTCGCCGCCGCGTCCTCCTCAAGTCTCCGGTGCCATCTCTCCGTGCCTCCTCCCATCGT 123
                                                                                   

consensus_13861#2      GTTTTTGGTGAAAGAAACCATTCGTTTCATTACTTGTTTGCTTAAGATCTCAGGTAACCG 103
consensus_13861#3      ------------------------------------------------------------
consensus_13861#0      TGTTGTGGTGAAAGAAACAATTCGTTTCATTACTTGTTTGCTTAAGATCTCAGGTAACCG 2700
consensus_13861#1      TGCTGCCACCGCGTCTCCTCCCAATCCCCTCCGTCTCCTCCCCATTCACAGATTGCGGCA 183
                                                                                   

consensus_13861#2      AAGTGGAGCTAATGAGGAAAAAGTTGAGACCATGGAACACATTGTTGAGCTGTTGCAGAC 163
consensus_13861#3      ------------------------------------------------------------
consensus_13861#0      AAGTGGAGCTAATGAGGAAAAAGTTGAGACAATGGAACA-ATTGTTGAGCTGTTGCAGAC 2759
consensus_13861#1      CACCACTAGGTATAAAGAGATCACAGCATCACCGGTCAGCCCATCCCAAATCCGGCCAGC 243
                                                                                   

consensus_13861#2      AGGCTGCTGACCAGATTAACGACCTCGGGGCGTCTGTGTACCCACCACAAGACTTATCTG 223
consensus_13861#3      ------------------------------------------------------------
consensus_13861#0      AGGCTGCTGACCAGATTAACGACCTCGGGGCGTCTGTGTACCCACCACAAGACTTATCTG 2819
consensus_13861#1      GCTAACCCCTCGTCGCCAGCCATCACAAAGAGGCGCCCTGGTTCCACGCGGCGGTGGCGG 303
                                                                                   

consensus_13861#2      AGATGAAATCCTCAGTGAAAAGATTGTAT-GTGGCC--CAATGCAATGCGGAGGGAAATC 280
consensus_13861#3      ------------------------------------------------------------
consensus_13861#0      AGATGAAATCCTCAGTGAAAAGATTGTAT-GGTGGCGCCAATGCAATGCGGAGGGAAATC 2878
consensus_13861#1      CGGCGAAAGCCATGAAGCTCAAATGGAACCATTGAGGTCAGTGCCATGTAGACTCACAGC 363
                                                                                   

consensus_13861#2      GGGA-CCTTGGTGGCTCACC--------TGAGGGTGCCTTTGTAGCCCTTGAAAGATTTG 331
consensus_13861#3      ------------------------------------------------------------
consensus_13861#0      AGGAGCCTTGGTGGCTCACC--------TGAGGGTGCCTTTGTAGCCCTTGAAAGATTTG 2930
consensus_13861#1      AGTGGCGGCGGCTGCCCATGGAGCTCGATGGGGTCGTAGTAGTGGTCCGTGTAGATGCGG 423
                                                                                   

consensus_13861#2      AGAAGTCCCTGGGAGCTCTAGAAGTGGAG---ATACTGATGATGTAGCAAACGAGATGGA 388
consensus_13861#3      --------------------------------TAGCTGATGATGTAGCNAACGANATGGA 28
consensus_13861#0      AGAAGTCCCTGGGAGCTCTAGAAGTGGAGA--TAGCTGATGATGTAGCAAACGAGATGGA 2988
consensus_13861#1      CTGTGGCCCATGTAGAGCATGCTCCGGCGACCCCATAGATGCTTAGGCCTTCTAGCTGTG 483
                                                            **** *   **   * *  **  

consensus_13861#2      AAATCTCCC---TAGCTCGTCCTGATTGCTGGAACT-TGAAAGATTTGC--CATACCTAT 442
consensus_13861#3      AAATNTTNCCNTTAGCTCGTCCTGATTGCTGGAACT-TGAAANATTTGC--CATACCTAT 85
consensus_13861#0      AAATCTTACCATTAGCTCGTCCTGATTGCTGGAACT-TGAAAGATTTGC--CATACCTAT 3045
consensus_13861#1      CGCCACCACATCCTTATTCTTCTCTCTGCAGAGGCCATGTCAGGATTGCTCCAAGCATGC 543
                               *       *  * **   *** *   *  **  *   ****  **  * *  

consensus_13861#2      ATGATAATATGTCCTCT-TGTTCGAGCT-ATAAGCTTTTGTTGTTCAACTAAAACGATGA 500
consensus_13861#3      ATGATAATATGTCCTCT-TGTTCGAGCT-ATAAGCTTTTGTTGTTCAACTNAAACGATGA 143
consensus_13861#0      ATGATAATATGTCCTCT-TGTTCGAGCT-ATAAGCTTTTGTTGTTCAACTAAAACGATGA 3103
consensus_13861#1      ATGCCAGGATCTTCGCTATGCTTTGGCCGATGCACACAAGGTGCTCGATGAAAAGTTTAC 603
                       ***  *  ** * * ** ** *   **  **   *    * ** ** *   ***   *  

consensus_13861#2      ATATGTATAATCCTTT------CCAGT--GTGG-AGATCAAATGCTTATTTCCCCCCAAA 551
consensus_13861#3      ATATGNATAATCCTTT------CCAGT--GTG--AGATCAAATGCTTATTGCTTNAAAAA 193
consensus_13861#0      ATATGTATAATCCTTT------CCAGT--GTG--AGATCAAATGCTTATTGCTTAGCCTG 3153
consensus_13861#1      TTGAGATTGGTCTGCTATTTGATCAGTCCGTGGGAACTCCCCAGCTAGCTAGCTAGCTAG 663
                        *  *  *  **   *       ****  ***  *  **    ***   *          

consensus_13861#2      AAAAAAA----------------------------------------------------- 558
consensus_13861#3      AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA------------------ 235
consensus_13861#0      CTTTGCTGTTCCTTTCTTTTTGCATCTGGGTGAAGGCAATGTCTTTGTCAAATGCCACAA 3213
consensus_13861#1      CTTAAACTTGCGATTAATTTAACTCAAGCAATGAAGCGAAT------------------- 704
                                                                                   

consensus_13861#2      ------------------------------------------------------------
consensus_13861#3      ------------------------------------------------------------
consensus_13861#0      GACTGACGACATTTCACTCCATTCATTATAAAAGGGACGATATTGACAAGTTCTTTTATC 3273
consensus_13861#1      ------------------------------------------------------------
                                                                                   

consensus_13861#2      -----------------
consensus_13861#3      -----------------
consensus_13861#0      AAAAAAACCTAAAAAGA 3290
consensus_13861#1      -----------------
                                        




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)