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Oryza sativa
cluster # 13907 cluster # 13907       Sequences # 14       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13907#0 length = 950 sequences # 7  
consensus_13907#1 length = 708 sequences # 7  

consensusID : consensus_13907#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 950
fasta sequence
                              [CACGCCAAGGAAGAAAAAAAAATGGGCGTCCAGCATCTGCTCAAGCTGAGGATGGCGTCGCCCCACCCGCACCCGCACCCCGGCGCGCCGCTCGCCGCGCGCCCGCTCTCCGCGCTCGCCTCCTTCTTCCTCGCCCGGCCCTCCTCCACCGCCGCCGCGCCTCCTCCTCGGCACGTCACCCTCTCGTGCTCGCGGCCGCACTGCAACCACAACCAGTGGGCCGCCAGCCGGTGCCGCGGGACGGCGGGCCGGCGGCGGCTGCAGGTCGTCGTGGCGATGTCCTCGTCGGCGCCGCCGCCGCCTCCGGGATCCGTGCAGAAGTCGGAGGAGGAGTGGGAGGCCATCCTCTCGCCGGAGCAGTTCCGCATC-CTCCG-CCTCAAGGGCA-CGGA-GTATCCTGGAA-CAGGTGAATATGA-CAAGC-TCTTCG-CTGAGGGTGTTTATGAATGTGCTGGATGCGGGACT-CCATTGTA-CAAGTCATCTACTAAATTCAACTCA-GGTTGTGGTTG-GCCAG-CATTCTATGAAGGATTTCCCGGAGCCATCGCACGAACGCCTGATCCTGATGGCAGGCGAATA-GAGATCACCT-GT-GCGGCTTGCGGAGGACATTTAGGACATGTCTTC-AAAGGGGAGGGGTTCAACACGCCTACAGATGAGCGGCATTGTGTTAACAGTATCTCACTCAAGTTCATTCCAGCCTCAGAAGATAGTAAGCTTTGAGCATGGAAGTATAAGCCCGCAATAGAA-CAGTCTGC-G-CAGTCAT-AGTAAACCTGTGATTATTAAAAAAGTATCGGATTTTTCAGAAAG-CAATTTATACTCTGCGGTTTGTCAATAATGCGAAATACCA-AGTCTGATGATTGTCGAAAACTTTTGGCTGTAACCTATTTACACTTCCAGTTCTACTTTTTTCTGATAACCAGAGAAGTTCATATCCGTACATAATTGAACACGGAAGAAAC]

[+] EMBL AK071730             [CACGCCAAGGAAGAAAAAAAAATGGGCGTCCAGCATCTGCTCAAGCTGAGGATGGCGTCGCCCCACCCGCACCCGCACCCCGGCGCGCCGCTCGCCGCGCGCCCGCTCTCCGCGCTCGCCTCCTTCTTCCTCGCCCGGCCCTCCTCCACCGCCGCCGCGCCTCCTCCTCGGCACGTCACCCTCTCGTGCTCGCGGCCGCACTGCAACCACAACCAGTGGGCCGCCAGCCGGTGCCGCGGGACGGCGGGCCGGCGGCGGCTGCAGGTCGTCGTGGCGATGTCCTCGTCGGCGCCGCCGCCGCCTCCGGGATCCGTGCAGAAGTCGGAGGAGGAGTGGGAGGCCATCCTCTCGCCGGAGCAGTTCCGCATC CTCCG CCTCAAGGGCA CGGA GTATCCTGGAA CAGGTGAATATGA CAAGC TCTTCG CTGAGGGTGTTTATGAATGTGCTGGATGCGGGACT CCATTGTA CAAGTCATCTACTAAATTCAACTCA GGTTGTGGTTG GCCAG CATTCTATGAAGGATTTCCCGGAGCCATCGCACGAACGCCTGATCCTGATGGCAGGCGAATA GAGATCACCT GT GCGGCTTGCGGAGGACATTTAGGACATGTCTTC AAAGGGGAGGGGTTCAACACGCCTACAGATGAGCGGCATTGTGTTAACAGTATCTCACTCAAGTTCATTCCAGCCTCAGAAGATAGTAAGCTTTGAGCATGGAAGTATAAGCCCGCAATAGAA CAGTCTGC G CAGTCAT AGTAAACCTGTGATTATTAAAAAAGTATCGGATTTTTCAGAAAG CAATTTATACTCTGCGGTTTGTCAATAATGCGAAATACCA AGTCTGATGATTGTCGAAAACTTTTGGCTGTAACCTATTTACACTTCCAGTTCTACTTTTTTCTGATAACCAGAGAAGTTCATATCCGTACATAATTGAACACGGAAGAAAC]
[+] EMBL AK104169             [     CAAGGAAGAAAAAAAAATGGGCGTCCAGCATCTGCTCAAGCTGAGGATGGCGTCGCCCCACCCGCACCCGCACCCCGGCGCGCCGCTCGCCGCGCGCCCGCTCTCCGCGCTCGCCTCCTTCTTCCTCGCCCGGCCCTCCTCCACCGCCGCCGCGCCTCCTCCTCGGCACGTCACCCTCTCGTGCTCGCGGCCGCACTGCAACCACAACCAGTGGGCCGCCAGCCGGTGCCGCGGGACGGCGGGCCGGCGGCGGCTGCAGGTCGTCGTGGCGATGTCCTCGTCGGCGCCGCCGCCGCCTCCGGGATCCGTGCAGAAGTCGGAGGAGGAGTGGGAGGCCATCCTCTCGCCGGAGCAGTTCCGCATC CTCCG CCTCAAGGGCA CGGA GTATCCTGGAA CAGGTGAATATGA CAAGC TCTTCG CTGAGGGTGTTTATGAATGTGCTGGATGCGGGACT CCATTGTA CAAGTCATCTACTAAATTCAACTCA GGTTGTGGTTG GCCAG CATTCTATGAAGGATTTCCCGGAGCCATCGCACGAACGCCTGATCCTGATGGCAGGCGAATA GAGATCACCT GT GCGGCTTGCGGAGGACATTTAGGACATGTCTTC AAAGGGGAGGGGTTCAACACGCCTACAGATGAGCGGCATTGTGTTAACAGTATCTCACTCAAGTTCATTCCAGCCTCAGAAGATAGTAAGCTTTGAGCATGGAAGTATAAGCCCGCAATAGAA CAGTCTGC G CAGTCAT AGTAAACCTGTGATTATTAAAAAAGTATCGGATTTTTCAGAAAG CAATTTATACTCTGCGGTTTGTCAATAATGCGAAATACCA AGTCTG                                                                                                          ]
[+] EMBL AK099324             [                                                                            ACCCCGGCGCGCCGCTCGCCGCGCGCCCGCTCTCCGCGCTCGCCTCCTTCTTCCTCGCCCGGCCCTCCTCCACCGCCGCCGCGCCTCCTCCTCGGCACGTCACCCTCTCGTGCTCGCGGCCGCACTGCAACCACAACCAGTGGGCCGCCAGCCGGTGCCGCGGGACGGCGGGCCGGCGGCGGCTGCAGGTCGTCGTGGCGATGTCCTCGTCGGCGCCGCCGCCGCCTCCGGGATCCGTGCAGAAGTCGGAGGAGGAGTGGGAGGCCATCCTCTCGCCGGAGCAGTTCCGCATC CTCCG CCTCAAGGGCA CGGA GTATCCTGGAA CAGGTGAATATGA CAAGC TCTTCG CTGAGGGTGTTTATGAATGTGCTGGATGCGGGACT CCATTGTA CAAGTCATCTACTAAATTCAACTCA GGTTGTGGTTG GCCAG CATTCTATGAAGGATTTCCCGGAGCCATCGCACGAACGCCTGATCCTGATGGCAGGCGAATA GAGATCACCT GT GCGGCTTGCGGAGGACATTTAGGACATGTCTTC AAAGGGGAGGGGTTCAACACGCCTACAGATGAGCGGCATTGTGTTAACAGTATCTCACTCAAGTTCATTCCAGCCTCAGAAGATAGTAAGCTTTGAGCATGGAAGTATAAGCCCGCAATAGAA CAGTCTGC G CAGTCAT AGTAAACCTGTGATTATTAAAAAAGTATCGGATTTTTCAGAAAG CAATTTATACTCTGCGGTTTGTCAATAATGCGAAATACCA AGTCT                                                                                                           ]
[+] EMBL CF303960             [                                                                                                                                                                                                                                                                                GGCGATGTCCTCGTCGGCGCCGCCGCCGCCTCCGGGATCCGTGCAGAAGTCGGAGGAGGAGTGGGAGGCCATCCTCTCGCCGGAGCAGTTCCGCATC CTCCG CCTCAAGGGCT CGGA GTATCCTGGAA CAGGTGAATATGA CAAGC TCTTCG CTGTTGGTGTTTATGAATGTGCTGGATGCGGGACT CCATTGTA CAAGTCATCTACTAAATTCAACTCA CGTTGTGGTTG GCCAG CATTCTATGAAGGATTTCCCGGAGCCATCGCACGAACGCCTGATCCTGATGGCAGGCGAATA GAGATCACCT GT GCGGCTTGCGGAGGACATTTAGGACATGTCTTC AAAGGGGAGGGGTTCAACACGCCTACAGATGAGCGGCATTGTGTTAACAGTATCTCACTCAAGTTCATTCCAGCCTCAGAAGATAGTAAGCTTTGAGCATGGAAGTATAAGCCCGCAATAGAA CAGTCTGC G CAGTCAT AGT                                                                                                                                                                                                   ]
[+] EMBL BQ906579             [                                                                                                                                                                                                                                                                                                                                                                             CATCTCTCCGCCCTCAAGGGCACCGGATGTATCCTGGAACCAGGTGAATATGACCAAGCTTCTTCGCCTGAGGGTGTTTATGAATGTGCTGGATGCGGGACTCCCATGGTACCAAGTCATCTACTAAATTCAACTCACGGTTGT GTTGCGCCAGCCATTCTATGAAGGATTTCCCGGAGCCATCGCACGAACGCCTGATCCTGATGGCAGGCGAATA GAGATCACCT GT GCGGCTTGCGGAGGACATTTAGGACATGTCTTC AAAGGGGAGGGGTTCAACACGCCTACAGATGAGCGGCATTGTGTTAACAGTATCTCACTCAAGTTCATTCCAGCCTCAGAAGATAGTAAGCTTTGAGCATGGAAGTATAAGCCCGCAATAGAA CAGTCTGC G CAGTCAT AGTAAACCTGTGATTATTAAAAAAGTATCGGATTTTTCAGAAAG C ATTTATACTCTGCGGTTTGTCAATAATGCGAAATACCACAGTCTGATGATTGTCGAAAAaaaaaa                                                                                      ]
[+] EMBL AU096933             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ATANGAGATCACCTNGTNGCGGCTTGCGGAGGACATTTAGGACATGTCTTCAAAAGGGGAGGGGTTCAACACGCCTACAGATGAGCGGCATTGTGTTAACAGTATCTCACTCAAGTTCATTCCAGCCTCAGAAGATAGTAAGCTTTGAGCATGGAAGTATAAGCCCGCAATAGAACCAGTCTGCNGCCAGTCATCAGTAAACCTGTGATTATTAAAAAAGTATCGGATTTTTCAGAAAGCCAATTTATACTCTGCGGTTTGTCAATAATGCGAAATACCA AGTCTGATGATTGTCGAAA                                                                                             ]
[+] EMBL AU174507             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GT GCGGCTTGCGGAGGACATTTAGGACATGTCTTC AAAGGGGAGGGGTTCAACACGCCTACAGATGAGCGGCATTGTGTTAACAGTATCTCACTCAAGTTCATTCCAGCCTCAGAAGATAGTAAGCTTTGAGCATGGAAGTATAAGCCCGCAATAGAA CAGTCTGC G CAGTCAT AGTAAACCTGTGATTATTAAAAAAGTATCGGATTTTTCAGAAAG CAATTTATACTCTGCGGTTTGTCAATAATGCGAAATACCA AGTCTGATGATTGTCGAAAACTTTTGGCTGTAACCTATTTACACTTCCAGTTCTACTTTTTTCTGATAACCAGAGAAGTTCATATCCGTAaaaa                  ]


>consensus_13907#0 CACGCCAAGGAAGAAAAAAAAATGGGCGTCCAGCATCTGCTCAAGCTGAGGATGGCGTCG CCCCACCCGCACCCGCACCCCGGCGCGCCGCTCGCCGCGCGCCCGCTCTCCGCGCTCGCC TCCTTCTTCCTCGCCCGGCCCTCCTCCACCGCCGCCGCGCCTCCTCCTCGGCACGTCACC CTCTCGTGCTCGCGGCCGCACTGCAACCACAACCAGTGGGCCGCCAGCCGGTGCCGCGGG ACGGCGGGCCGGCGGCGGCTGCAGGTCGTCGTGGCGATGTCCTCGTCGGCGCCGCCGCCG CCTCCGGGATCCGTGCAGAAGTCGGAGGAGGAGTGGGAGGCCATCCTCTCGCCGGAGCAG TTCCGCATCCTCCGCCTCAAGGGCACGGAGTATCCTGGAACAGGTGAATATGACAAGCTC TTCGCTGAGGGTGTTTATGAATGTGCTGGATGCGGGACTCCATTGTACAAGTCATCTACT AAATTCAACTCAGGTTGTGGTTGGCCAGCATTCTATGAAGGATTTCCCGGAGCCATCGCA CGAACGCCTGATCCTGATGGCAGGCGAATAGAGATCACCTGTGCGGCTTGCGGAGGACAT TTAGGACATGTCTTCAAAGGGGAGGGGTTCAACACGCCTACAGATGAGCGGCATTGTGTT AACAGTATCTCACTCAAGTTCATTCCAGCCTCAGAAGATAGTAAGCTTTGAGCATGGAAG TATAAGCCCGCAATAGAACAGTCTGCGCAGTCATAGTAAACCTGTGATTATTAAAAAAGT ATCGGATTTTTCAGAAAGCAATTTATACTCTGCGGTTTGTCAATAATGCGAAATACCAAG TCTGATGATTGTCGAAAACTTTTGGCTGTAACCTATTTACACTTCCAGTTCTACTTTTTT CTGATAACCAGAGAAGTTCATATCCGTACATAATTGAACACGGAAGAAAC



consensusID : consensus_13907#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 708
fasta sequence
                              [GGGAATACCTTGCGTCGCACT-GCAACCACAACCAGTGGGCCGCCAGCCGGTGCCGCGGGACGGCGGGCCGGCGGCGGCTGCAGG-GCGTCGTGGCGATGTCCTCGTCGGCGCCGTCGCCGCCTCCGGGATCCGTGCAGAAGTCGGAGGAGGAGTGGGAGGCCATCCTCTCGCCGGAGCAGTTCCGCATCCTCCGCCTCAAGGGCACGGAGTATCCTGGAACAGGTGAATATGACAAGCTCTTCGCGGAGGGTGTTTATGAATGTGCTGGATGCGGGACTCCATTGTACAAGTCATCTACTAAATTCAACTCAGGTTGTGGTTGGCCAGCATTCTATGAAGGATTTCCTGGAGCCATCGCACGAACGCCTGATCCTGATGGCAGGCGAATAGAGATCACCTGTGCGGCTTGCGGAGGACATTTAGGACATGTCTTCAAAGGGGAGGGGTTCAACACGCCTACAGATGAGCGGCATTGTGTTAACAGTATCTCACTCAAGTTCATTCCAGCCTCAGAAGATAGTAAGCTTTGAGCATGAAAGTATAAGCCTACAATAGAACAGTCTGCGCAGTCAGAGTAAACCTGTGATTATTAAAAAAAAGTATCGGATTTTTCAGAAAGCAATTTGTACTCTGCAGTTTGTCAATAATGCGAAATACCAAGTCTGATGATTGTCGAAAAAAAAAAAAAAAAAAAAAAAAGAGCGGCCG]

[+] EMBL BU673375             [GGGAATACCTTGCGTCGCACT GCAACCACAACCAGTGGGCCGCCAG CGGTGCCGCGGGACGGCGGGCCGGCGGCGGCTGCAGGCGCGTCGTGGCGATGTCCTCGTCGGCGCCGTCGCCGCCTCCGGGATCCGTGCAGAAGTCGGAGGAGGAGTGGGAGGCCATCCTCTCGCCGGAGCAGTTCCGCATCCTCCGCCTCAAGGGCACGGAGTATCCTGGAACAGGTGAATATGACAAGCTCTTCGCGGAGGGTGTTTATGAATGTGCTGGATGCGGGACTCCATTGTACAAGTCATCTACTAAATTCAACTCAGGTTGTGGTTGGCCAGCATTCTATGAAGGATTTCCTGGAGCCATCGCACGAACGCCTGATCCTGATGGCAGGCGAATAGAGATCACCTGTGCGGCTTGCGGAGGACATTTAGGACATGTCTTCAAAGGGGAGGGGTTCAACACGCCTACAGATGAGCGGCATTGTGTTAACAGTATCTCACTCAAGTTCATTCCAGCCTCAGAAGATAGTAAGCTTTGAGCATGAAAGTATAAGCCTACAATAGAACAGTCTGCGCAGTCAGAGTAAACCTGTGATTATTACAAAACAGTATCGGATTTTTCAGAAAGCAATTTGTACTCTGCAGTTTGTCAATAATGCGAAATACCAAGTCTGATGATTGTCGA                                ]
[+] EMBL BI305518             [              cCGCACTNGCAACCACAACCAGTGGGCCGCCAGCCGGTGCCGCGGGACGGCGGGCCGGCGGCGGCTGCAGG GCGTCGTGGCGATGTCCTCGTCGGCGCCGTCGCCGCCTCCGGGATCCGTGCAGAAGTCGGAGGAGGAGTGGGAGGCCATCCTCTCGCCGGAGCAGTTCCGCATCCTCCGCCTCAAGGGCACGGAGTATCCTGGAACAGGTGAATATGACAAGCTCTTCGCGGAGGGTGTTTATGAATGTGCTGGATGCGGGACTCCATTGTACAAGTCATCTACTAAATTCAACTCAGGTTGTGGTTGGCCAGCATTCTATGAAGGATTTCCTGGAGCCATCGCACGAACGCCTGATCCTGATGGCAGGCGAATAGAGATCACCTGTGCGGCTTGCGGAGGACATTTAGGACATGTCTTCAAAGGGGAGGGGTTCAACACGCCTACAGATGAGCGGCATTGTGTTAACAGTATCTCACTCAAGTTCATTCCAGCCTCAGAAGATAGTAAGCTTTGAGCATGAAAGTATAAGCCTACAATAGAACAGTCTGCGCAGTCAGAGTAAACCTGTGATTATTAAAAAAAAGTATCGGATTTTTCAGAAAGCAATTTGTACTCTGCAGTTTGTCAATAATGCGAAATACCAAGTCTGATGATTGTCGAAAAAAAAAAAAAAAAAAAAAAAAGAGCGGCCG]
[+] EMBL BU673787             [                         ACCACAACCAGTGGGCCGCCAGCCGGTGCCGCGGGACGGCGGGCCGGCGGCGGCTGCAGG GCGTCGTGGCGATGTCCTCGTCGGCGCCGTCGCCGCCTCCGGGATCCGTGCAGAAGTCGGAGGAGGAGTGGGAGGCCATCCTCTCGCCGGAGCAGTTCCGCATCCTCCGCCTCAAGGGCACGGAGTATCCTGGAACAGGTGAATATGACAAGCTCTTCGCGGAGGGTGTTTATGAATGTGCTGGATGCGGGACTCCATTGTACAAGTCATCTACTAAATTCAACTCAGGTTGTGGTTGGCCAGCATTCTATGAAGGATTTCCTGGAGCCATCGCACGAACGCCTGATCCTGATGGCAGGCGAATAGAGATCACCTGTGCGGCTTGCGGAGGACATTTAGGACATGTCTTCAAAGGGGAGGGGTTCAACACGCCTACAGATGAGCGGCATTGTGTTAACAGTATCTCACTCAAGTTCATTCCAGCCTCAGAAGATAGTAAGCTTTGAGCATGAAAGTATAAGCCTACAATAGAACAGTCTGCGCAGTCAGAGTAAACCTGTGATTATTAAAAAAAAGTATCGGATTTTTCAGAAAGCAATTTGTACTCTGCAGTTTGTCAATAATGCGAAATACCAAGTCTGATGATTGTCG                                 ]
[+] EMBL CB966484             [                          CCACAACCAGTGGGCCGCCAGCCGGTGCCGCGGGACGGCGGGCCGGCGGCGGCTGCAGG GCGTCGTGGCGATGTCCTCGTCGGCGCCGTCGCCGCCTCCGGGATCCGTGCAGAAGTCGGAGGAGGAGTGGGAGGCCATCCTCTCGCCGGAGCAGTTCCGCATCCTCCGCCTCAAGGGCACGGAGTATCCTGGAACAGGTGAATATGACAAGCTCTTCGCGGAGGGTGTTTATGAATGTGCTGGATGCGGGACTCCATTGTACAAGTCATCTACTAAATTCAACTCAGGTTGTGGTTGGCCAGCATTCTATGAAGGATTTCCTGGAGCCATCGCACGAACGCCTGATCCTGATGGCAGGCGAATAGAGATCACCTGTGCGGCTTGCGGAGGACATTTAGGACATGTCTTCAAAGGGGAGGGGTTCAACACGCCTACAGATGAGCGGCATTGTGTTAACAGTATCTCACTCAAGTTCATTCCAGCCTCAGAAGATAGTAAGCTTTGAGCATGAAAGTATAAGCCTACAATAGAACAGTCTGCGCAGTCAGAGTAAACCTGTGATTATTACCCAAAAGTATCGGATTTTTCAGAAAGgc                                                                                       ]
[+] EMBL BI306201             [                            ACAACCAGTGGGCCGCCAGCCGGTGCCGCGGGACGGCGGGCCGGCGGCGGCTGCAGG GCGTCGTGGCGATGTCCTCGTCGGCGCCGTCGCCGCCTCCGGGATCCGTGCAGAAGTCGGAGGAGGAGTGGGAGGCCATCCTCTCGCCGGAGCAGTTCCGCATCCTCCGCCTCAAGGGCACGGAGTATCCTGGAACAGGTGAATATGACAAGCTCTTCGCGGAGGGTGTTTATGAATGTGCTGGATGCGGGACTCCATTGTACAAGTCATCTACTAAATTCAACTCAGGTTGTGGTTGGCCAGCATTCTATGAAGGATTTCCTGGAGCCATCGCACGAACGCCTGATCCTGATGGCAGGCGAATAGAGATCACCTGTGCGGCTTGCGGAGGACATTTAGGACATGTCTTCAAAGGGGAGGGGTTCAACACGCCTACAGATGAGCGGCATTGTGTTAACAGTATCTCACTCAAGTTCATTCCAGCCTCAGAAGATAGTAAGCTTTGAGCATGAAAGTATAAGCCTACAATAGAACAGTCTGCGCAGTCAGAGTAAACCTGTGATTATTAAAAAAAAGTATCGGATTTTTCAGAAAGCAATTTGTACTCTGCAGTTTGTCAATAATGCGAAATACCAAGTCTGATGATTGTCGAAAActttt                        ]
[+] EMBL BU673191             [                            ACAACCAGTGGGCCGCCAGCCGGTGCCGCGGGACGGCGGGCCGGCGGCGGCTGCAGG GCGTCGTGGCGATGTCCTCGTCGGCGCCGTCGCCGCCTCCGGGATCCGTGCAGAAGTCGGAGGAGGAGTGGGAGGCCATCCTCTCGCCGGAGCAGTTCCGCATCCTCCGCCTCAAGGGCACGGAGTATCCTGGAACAGGTGAATATGACAAGCTCTTCGCGGAGGGTGTTTATGAATGTGCTGGATGCGGGACTCCATTGTACAAGTCATCTACTAAATTCAACTCAGGTTGTGGTTGGCCAGCATTCTATGAAGGATTTCCTGGAGCCATCGCACGAACGCCTGATCCTGATGGCAGGCGAATAGAGATCACCTGTGCGGCTTGCGGAGGACATCTAGGACATGTCTTCAAAGGGGAGGGGTTCAACACGCCTACAGATGAGCGGCATTGTGTTAACAGTATCTCACTCAAGTTCATTCCAGGCTCCGAAGATAGTAAGCTTTGAGCATGAA                                                                                                                                                                           ]
[+] EMBL CB967261             [                                         CGCCAG CGGTGCCGCGGGACGGCGGGCCGGCGGCGGCTGCAGG GCGTCGTGGCGATGTCCTCGTCGGCGCCGTCGCCGCCTCCGGGATCCGTGCAGAAGTCGGAGGAGGAGTGGGAGGCCATCCTCTCGCCGGAGCAGTTCCGCATCCTCCGCCTCAAGGGCACGGAGTATCCTGGAACAGGTGAATATGACAAGCTCTTCGCGGAGGGTGTTTATGAATGTGCTGGATGCGGGACTCCATTGTACAAGTCATC                                                                                                                                                                                                                                                                                                                                                                                                                             ]


>consensus_13907#1 GGGAATACCTTGCGTCGCACTGCAACCACAACCAGTGGGCCGCCAGCCGGTGCCGCGGGA CGGCGGGCCGGCGGCGGCTGCAGGGCGTCGTGGCGATGTCCTCGTCGGCGCCGTCGCCGC CTCCGGGATCCGTGCAGAAGTCGGAGGAGGAGTGGGAGGCCATCCTCTCGCCGGAGCAGT TCCGCATCCTCCGCCTCAAGGGCACGGAGTATCCTGGAACAGGTGAATATGACAAGCTCT TCGCGGAGGGTGTTTATGAATGTGCTGGATGCGGGACTCCATTGTACAAGTCATCTACTA AATTCAACTCAGGTTGTGGTTGGCCAGCATTCTATGAAGGATTTCCTGGAGCCATCGCAC GAACGCCTGATCCTGATGGCAGGCGAATAGAGATCACCTGTGCGGCTTGCGGAGGACATT TAGGACATGTCTTCAAAGGGGAGGGGTTCAACACGCCTACAGATGAGCGGCATTGTGTTA ACAGTATCTCACTCAAGTTCATTCCAGCCTCAGAAGATAGTAAGCTTTGAGCATGAAAGT ATAAGCCTACAATAGAACAGTCTGCGCAGTCAGAGTAAACCTGTGATTATTAAAAAAAAG TATCGGATTTTTCAGAAAGCAATTTGTACTCTGCAGTTTGTCAATAATGCGAAATACCAA GTCTGATGATTGTCGAAAAAAAAAAAAAAAAAAAAAAAAGAGCGGCCG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13907#0      CACGCCAAGGAAGAAAAAAAAATGGGCGTCCAGCATCTGCTCAAGCTGAGGATGGCGTCG 60
consensus_13907#1      ------------------------------------------------------------
                                                                                   

consensus_13907#0      CCCCACCCGCACCCGCACCCCGGCGCGCCGCTCGCCGCGCGCCCGCTCTCCGCGCTCGCC 120
consensus_13907#1      ------------------------------------------------------------
                                                                                   

consensus_13907#0      TCCTTCTTCCTCGCCCGGCCCTCCTCCACCGCCGCCGCGCCTCCTCCTCGGCACGTCACC 180
consensus_13907#1      ------------------------------------------------------------
                                                                                   

consensus_13907#0      CTCTCGTGCTCGCGGCCGCACTGCAACCACAACCAGTGGGCCGCCAGCCGGTGCCGCGGG 240
consensus_13907#1      -GGGAATACCTTGCGTCGCACTGCAACCACAACCAGTGGGCCGCCAGCCGGTGCCGCGGG 59
                             * *     * ********************************************

consensus_13907#0      ACGGCGGGCCGGCGGCGGCTGCAGGTCGTCGTGGCGATGTCCTCGTCGGCGCCGCCGCCG 300
consensus_13907#1      ACGGCGGGCCGGCGGCGGCTGCAGGGCGTCGTGGCGATGTCCTCGTCGGCGCCGTCGCCG 119
                       ************************* **************************** *****

consensus_13907#0      CCTCCGGGATCCGTGCAGAAGTCGGAGGAGGAGTGGGAGGCCATCCTCTCGCCGGAGCAG 360
consensus_13907#1      CCTCCGGGATCCGTGCAGAAGTCGGAGGAGGAGTGGGAGGCCATCCTCTCGCCGGAGCAG 179
                       ************************************************************

consensus_13907#0      TTCCGCATCCTCCGCCTCAAGGGCACGGAGTATCCTGGAACAGGTGAATATGACAAGCTC 420
consensus_13907#1      TTCCGCATCCTCCGCCTCAAGGGCACGGAGTATCCTGGAACAGGTGAATATGACAAGCTC 239
                       ************************************************************

consensus_13907#0      TTCGCTGAGGGTGTTTATGAATGTGCTGGATGCGGGACTCCATTGTACAAGTCATCTACT 480
consensus_13907#1      TTCGCGGAGGGTGTTTATGAATGTGCTGGATGCGGGACTCCATTGTACAAGTCATCTACT 299
                       ***** ******************************************************

consensus_13907#0      AAATTCAACTCAGGTTGTGGTTGGCCAGCATTCTATGAAGGATTTCCCGGAGCCATCGCA 540
consensus_13907#1      AAATTCAACTCAGGTTGTGGTTGGCCAGCATTCTATGAAGGATTTCCTGGAGCCATCGCA 359
                       *********************************************** ************

consensus_13907#0      CGAACGCCTGATCCTGATGGCAGGCGAATAGAGATCACCTGTGCGGCTTGCGGAGGACAT 600
consensus_13907#1      CGAACGCCTGATCCTGATGGCAGGCGAATAGAGATCACCTGTGCGGCTTGCGGAGGACAT 419
                       ************************************************************

consensus_13907#0      TTAGGACATGTCTTCAAAGGGGAGGGGTTCAACACGCCTACAGATGAGCGGCATTGTGTT 660
consensus_13907#1      TTAGGACATGTCTTCAAAGGGGAGGGGTTCAACACGCCTACAGATGAGCGGCATTGTGTT 479
                       ************************************************************

consensus_13907#0      AACAGTATCTCACTCAAGTTCATTCCAGCCTCAGAAGATAGTAAGCTTTGAGCATGGAAG 720
consensus_13907#1      AACAGTATCTCACTCAAGTTCATTCCAGCCTCAGAAGATAGTAAGCTTTGAGCATGAAAG 539
                       ******************************************************** ***

consensus_13907#0      TATAAGCCCGCAATAGAACAGTCTGCGCAGTCATAGTAAACCTGTGATTATTAAAAAA-- 778
consensus_13907#1      TATAAGCCTACAATAGAACAGTCTGCGCAGTCAGAGTAAACCTGTGATTATTAAAAAAAA 599
                       ********  *********************** ************************  

consensus_13907#0      GTATCGGATTTTTCAGAAAGCAATTTATACTCTGCGGTTTGTCAATAATGCGAAATACCA 838
consensus_13907#1      GTATCGGATTTTTCAGAAAGCAATTTGTACTCTGCAGTTTGTCAATAATGCGAAATACCA 659
                       ************************** ******** ************************

consensus_13907#0      AGTCTGATGATTGTCGAAAACTTTTGGCTGTAACCTATTTACACTTCCAGTTCTACTTTT 898
consensus_13907#1      AGTCTGATGATTGTCGAAAAAAAAAAAAAAAAAAAAAAAAGAGCGGCCG----------- 708
                       ********************           **   *      *  **            

consensus_13907#0      TTCTGATAACCAGAGAAGTTCATATCCGTACATAATTGAACACGGAAGAAAC 950
consensus_13907#1      ----------------------------------------------------
                                                                           




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)