These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13974#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 2145 fasta sequence [CCCTCCCAGTTTTTTTCCGCCTCTCCGCCTCTCGCCTCTCCCCACCCCACCCCCCCGCGACGACGGGGCCCCGAAGCTTCCAGAAGCTTCCAGGGTCCTCCCCTCCCAGATCGCCCCGCCCTCCGGAGCTCAGCGGGGGCGGCCGCGGGTGGCGGAGGAGGAGGAGGAGGAGGAGGAGCCGGGGTGGGGGCGGCTAGGGTTAGGGATCCGGGGGTGGTGGGGTGGGGGTGCTGCGGCAGCGGGTGGGTTCGAGAAGGAGGATGCATATGATGCGGCGGCTCAAGAGCATCGCCTCCGGCCGCTCGTCCGTCTCCGATCCGGGTGGTG-ATTCTGGCACCAAAAGACCAAAATTCGATCAGGATGGAGCAGGAGATATAGTCATTGAGCCACATCTAACTGATGACAAACCTATGCGCGTAGACCAAGAATCATCTTCATCTCATAGAGATGCTGAGGCAAGCACATCTACTAGTAAGAATCCTGGTAGAACTGAAGAAGCAGGTGCGGATATTCTTCCAAAAGAAATGAATGAGATGACAATAAGTGATGATAAAGTTGATGGCCATAATGATAAGGAATCTGAAGGTGTTATTGTTAATGCAAATGGAACAGAAACAGGTCAGATTATTGTGACAT-CAATTGGAGGTCAAAATGGGAAGCCAAAGCAGAAGGTATCATACATGGCAGAACGTGTAGTTGGTACTGGTTCATTTGGTGTAGTTTTTCAGGCCAAGTGCTTGGAAACTGGAGAGACTGTTGCCATTAAGAAGGTTCTGCAAGATAAAAGATATAAGAACAGAGAGCTCCAAACAATGCAACTGCTTGACCATCCTAATGTGGTCCAGCTAAAGCATCACTTCTTTTCGACGACTGAGAGGGGTGAAGTTTACCTCAACCTTGTACTTGTATATGTCTCAGAGACAGTTTATCGTGTTGCTAAATACTACAATCGGATGAACCAGCGTGTGCCCATATTGCATGTTAAGCTGTATGCATATCAGATGTGCCGTGCCCTTGCATATATCCATCGTGTTGTTGGTGTCTGCCATCGAGATATTAAACCTCAAAATCTACTGGTCAATCCTCATACACATCAACTGAAGCTTTGTGATTTTGGAAGTGCTAAGAAATTGGTTCCTGGTGAACCTAACATATCATACATTTGCTCGCGGTATTATAGGGCTCCTGAACTAATATTTGGAGCTACAGAGTATACCACAGCAATTGATATCTGGTCTGTTGGTTGTGTACTAGCTGAGCTTCTGATTGGTCAGCCTCTGTTCCCTGGAGAAAGTGGTGTTGATCAACTGGTGGAAATAATAAAGATTTTGGGTACACCAACTAGAGAAGAAATCAGGTGCATGAATCCAAACTATTCTGAATTCAAATTCCCTCAGATAAAAGCTCATCCATGGCACAAGCTTTTTGGTAAGCGCATGCCACCTGAAGCTGTTGATCTTGTGTCAAGGTTGCTGCAGTACTCGCCAAATTTGCGTTGCACAGCTGTTGATGCTTGTG---CTCATCCATTCTTTGATGAACTGCGGGATCCCAAGACCTGCTTGTCAAATGGACGATCATTACCACCCTTGTTCGACTTCTCAGCTGCTGAATTGGAAGGCCTTCCTGTTGAGCTAGTCCACCGAATCATTCCTGAACATATGAGGAAGTGAAACGGAATGGCAGGAAAACACAATTTCGCTGTTAGAACAGCGGATAGGTGTGAGTGAGATGGTT-GATGC-AAACAT-CCAT-AACTTATGGAT-GGATCAGGAGTAGACTAGATTCACTGCCTTG-CTAGATGTGGAAAGAGGGATGCTATAGAAGTTCCTCATCATCACTTCACATAAAGAGCGAGGCAGTGGCTCATTCTGATGCAATTCCAAGAGGTAATGAGCAACTGAGATTGGCACGGCAACTCGCACATTTTCATCATGTGCCACCAGAGACGTTTATCTACTAGGCTGCTGTTGTATAATCAGGTACATGCTGAGTTTGCAGTTGTTTGTAGACACTTGTTTCCCTGAACAAGCGATGAGAGAAATCCAGA-TTCCAAAGTGCTTGCTTTG-CTATCATG-AAAGCCTGCCCGGAACATGTCAATTTTGATTAGTGCACGCAATGGCCTTTCCTTTATGTTTCAGAAGTCTAATC] [+] EMBL CB663265 [CCCTCCCAGTTTTTTTCCGCCTCTCCGCCTCTCGCCTCTCCCCACCCCACCCCCCCGCGACGACGGGGCCCCGAAGCTTCCAGAAGCTTCCAGGGTCCTCCCCTCCCAGATCGCCCCGCCCTCCGGAGCTCAGCGGGGGCGGCCGCGGGTGGCGGAGGAGGAGGAGGAGGAGGAGGAGCCGGGGTGGGGGCGGCTAGGGTTAGGGATCCGGGGGTGGTG ] [+] EMBL AK072390 [ CTCTCGCCTCTCCCCACCCCACCCCCCCGCGACGACGGGGCCCCGAAGCTTCCAGAAGCTTCCAGGGTCCTCCCCTCCCAGATCGCCCCGCCCTCCGGAGCTCAGCGGGGGCGGCCGCGGGTGGCGGAGGAGGAGGAGGAGGAGGAGGAGCCGGGGTGGGGGCGGCTAGGGTTAGGGATCCGGGGGTGGTGGGGTGGGGGTGCTGCGGCAGCGGGTGGGTTCGAGAAGGAGGATGCATATGATGCGGCGGCTCAAGAGCATCGCCTCCGGCCGCTCGTCCGTCTCCGATCCGGGTGGTG ATTCTGGCACCAAAAGACCAAAATTCGATCAGGATGGAGCAGGAGATATAGTCATTGAGCCACATCTAACTGATGACAAACCTATGCGCGTAGACCAAGAATCATCTTCATCTCATAGAGATGCTGAGGCAAGCACATCTACTAGTAAGAATCCTGGTAGAACTGAAGAAGCAGGTGCGGATATTCTTCCAAAAGAAATGAATGAGATGACAATAAGTGATGATAAAGTTGATGGCCATAATGATAAGGAATCTGAAGGTGTTATTGTTAATGCAAATGGAACAGAAACAGGTCAGATTATTGTGACAT CAATTGGAGGTCAAAATGGGAAGCCAAAGCAGAAGGTATCATACATGGCAGAACGTGTAGTTGGTACTGGTTCATTTGGTGTAGTTTTTCAGGCCAAGTGCTTGGAAACTGGAGAGACTGTTGCCATTAAGAAGGTTCTGCAAGATAAAAGATATAAGAACAGAGAGCTCCAAACAATGCAACTGCTTGACCATCCTAATGTGGTCCAGCTAAAGCATCACTTCTTTTCGACGACTGAGAGGGGTGAAGTTTACCTCAACCTTGTACTTGTATATGTCTCAGAGACAGTTTATCGTGTTGCTAAATACTACAATCGGATGAACCAGCGTGTGCCCATATTGCATGTTAAGCTGTATGCATATCAGATGTGCCGTGCCCTTGCATATATCCATCGTGTTGTTGGTGTCTGCCATCGAGATATTAAACCTCAAAATCTACTGGTCAATCCTCATACACATCAACTGAAGCTTTGTGATTTTGGAAGTGCTAAGAAATTGGTTCCTGGTGAACCTAACATATCATACATTTGCTCGCGGTATTATAGGGCTCCTGAACTAATATTTGGAGCTACAGAGTATACCACAGCAATTGATATCTGGTCTGTTGGTTGTGTACTAGCTGAGCTTCTGATTGGTCAGCCTCTGTTCCCTGGAGAAAGTGGTGTTGATCAACTGGTGGAAATAATAAAGATTTTGGGTACACCAACTAGAGAAGAAATCAGGTGCATGAATCCAAACTATTCTGAATTCAAATTCCCTCAGATAAAAGCTCATCCATGGCACAAGCTTTTTGGTAAGCGCATGCCACCTGAAGCTGTTGATCTTGTGTCAAGGTTGCTGCAGTACTCGCCAAATTTGCGTTGCACAGCTGTTGATGCTTGTG CTCATCCATTCTTTGATGAACTGCGGGATCCCAAGACCTGCTTGTCAAATGGACGATCATTACCACCCTTGTTCGACTTCTCAGCTGCTGAATTGGAAGGCCTTCCTGTTGAGCTAGTCCACCGAATCATTCCTGAACATATGAGGAAGTGAAACGGAATGGCAGGAAAACACAATTTCGCTGTTAGAACAGCGGATAGGTGTGAGTGAGATGGTT GATGC AAACAT CCGT AACTTATGGAT GGATCAGGAGTAGACTAGATTCACTGCCTTG CTAGATGTGGAAAGAGGGATGCTATAGAAGTTCCTCATCATCACTTCACATAAAGAGTGAGGCAGTGGCTCATTCTGATGCAATTCCAAGAGGTAATGAGCAACTGAGATTGGCACGGCAACTCGCACATTTTCATCATGTGCCACCAGAGACGTTTATCTACTAGGCTGCTGTTGTATAATCAGGTACATGCTGAGTTTGCAGTTGTTTGTAGACACTTGTTTCCCTGAACAAGCGATGAGAGAAATCCAGA TTCCAAAGTGCTTGCTTTG CTATCATG AAAGCCTGCCCGGAACATGTCAATTTTGATTAGTGCACGCAATGGCCTTTCCTTTATGTTTCAGAAGTCTAATC] [+] EMBL CF309558 [ tatggactGAAGGAGTATGCATATGATGCGGCGGCTCAAGAGCATCGCCTCCGGCCGCTCGTCCGTCTCCGATCCGGGTGGTG ATTCTGGCACCAAAAGACCAAAATTCGATCAGGATGGAGCAGGAGATATAGTCATTGAGCCACATCTAACTGATGACAAACCTATGCGCGTAGACCAAGAATCATCTTCATCTCATAGAGATGCTGAGGCAAGCACATCTACTAGTAAGAATCCTGGTAGAACTGAAGAAGCAGGTGCGGATATTCTTCCAAAAGAAATGAATGAGATGACAATAAGTGATGATAAAGTTGATGGCCATAATGATAAGGAATCTGAAGGTGTTATTGTTAATGCAAATGGAACAGAAACAGGTCAGATTATTGTGACATNCAATTGGAGGTCAAAATAGGAAGCCAAAGCAGAAGGTATCATACAT ] [+] EMBL CB676689 [ GCGGCTCAAGAGCATCGCCTCCGGCCGCTCGGCCGTCTCCGATCCGGGTGGTGCCTCCTGGCACCAAAAGACCATTTTTCTATCAGGATGGAGCAGGAGATATAGTCATTGAGCCACATCTAACTGATGACAAACCTATGCGCGTACACCAAGAATCATCTTCATCTCATAGAGATGCTGAGGCAAGCACATCTACTAGTAAGAATCCTGGTAGAACTGAAGAAGCAGGTGCGGATATTCTTCCAAAAGAAATGAATGAGATGACAATAAGTGATGATAAAGCTGATGGCCATAATGATATTTAATCTGAAGGTGTTATTGTTAATGCAAATGGAACAGAAACAGGTCACATTATTGTGACAT CAATTGGAGGTCAAAATGGGAAGCCAAAGCAGAACGTATCATACATGGCAGAACGTGTAGTTGGGACTGGTTCATTTGGTGTAGTTTTTCAAGCCAAGTGCTTGGAAACTGGAGAGACTGTTGCCATTAAGAAGGTTCTGCAAGATAAAAGATATAAGAACAGAGAGCTCCAAACAATGCAACTGCTTGACCATCCTAATGTGGTCCAGCTAAAGCATCACTTCTTTTCGACGACTGAGAGGGGTGAAGTTTACCTCAACCTTGTACTTGAATATGTCTCAGAGACAGTTTATCGAGTTGCTAAATACT ] [+] EMBL CA923291 [ TTTGGTGTAGTTTTTCAGGCCAAGTGCTTGGAAACTGGAGAGACTGTTGCCATTAAGAAGGTTCTGCAAGATAAAAGATATAAGAACAGAGAGCTCCAAACAATGCAGCTGCTTGACCATCCTAATGTGGTCCGGCTAAAGCATCACTTCTTTTCGACGACTGAGAGGGGTGAAGTTTACC ] [+] EMBL OSC106241 [ CATCGAGATATTAAACCTCAAAATCTACTGGTCAATCCTCATACACATCAACTGAAGCTTTGTGATTTTGGAAGTGCTAAGAAATTGGTTCCTGGTGAACCTAACATATCATACATTTGCTCGCGGTATTATAGGGCTCCTGAACTAATATTTGGAGCTACAGAGTATACCACAGCAATTGATATCTGGTCTGTTGGTTGTGTACTAGCTGAGCTTCTGATTGGTCAGCCTCTGTTCCCTGGAGAAAGTGGTGTTGATCAACTGGTGGAAATAATAAAGATTTTGGGTACACCAACTAGAGAAGAAATCAGGTGCATGAATCCAAACTATTCTGAATTCAAATTCCCTCAGATAAAAGCTCATCCATGGCACAAGCTTT ] [+] EMBL OSSTTPK [ CATCGAGATATTAAACCTCAAAATCTACTGGTCAATCCTCATACACATCAACTGAAGCTTTGTGATTTTGGAAGTGCTAAGAAATTGGTTCCTGGTGAACCTAACATATCATACATTTGCTCGCGGTATTATAGGGCTCCTGAACTAATATTTGGAGCTACAGAGTATACCACAGCAATTGATATCTGGTCTGTTGGTTGTGTACTAGCTGAGCTTCTGATTGGTCAGCCTCTGTTCCCTGGAGAAAGTGGTGTTGATCAACTGGTGGAAATAATAAAGATTTTGGGTACACCAACTAGAGAAGAAATCAGGTGCATGAATCCAAACTATTCTGAATTCAAATTCCCTCAGATAAAAGCTCATCCATGGCACAAGCTTTTTGGTAAGCGCATGCCACCTGAAGCTGTTGATCTGGTGTCAAGGTTGCTGCAGTACTCGCCAAATTTGCGTTGCACAGCTGTTGATGCTTGTGCCCCTCATCCATTCTTTGATGAACTGCGGGATCCCAAGACCTGCTTGTCAAATGGACGATCATTACCACCCTTGTTCGACTTCTCAGCTGCTGAATTGGAAGGCCTTCCTGTTGAGCTAGTCCACCGAATCATTCCTGAACATATGAGGAAGTGAAACGGAATGGCAGGAAAACACAATTTCGCTGTTAGAACAGCGGATAGGTGTGAGTGAGATGGTT GATGC AAACAT CCAT AACTTATGGAT GGATCAGGAGTAGACTAGATTCACTGCCTTG CTAGATGTGGAAAGAGGGATGCTATAGAAGTTCCTCATCATCACTTCACATAAAGAGCGAGGCAGTGGCTCATTCTGATGCAATTCCAAGAGGTAATGAGCAACTGAGATTGGCACGGCAACTCGCACATTTTCATCATGTGCCACCAGAGACGTTTATCTACTAGGCTGCTGTTGTATAATCAGGTACATGCTGAGTTTGCAGTTGTTTGTAGACACTTGTTTCCCTGAACAAGCGATGAGAGAAATCCAGA TTCCAAAGTGCTTGCTTTG CTATCAAA AAAaaa ] [+] EMBL CA764975 [ GGCTCCTGAACTGATATTTGGAGCT CAGAGACTACCNCAGCAATTGATATCTGNTCTGNTGGNTGTGTACTAGCTGNGCTTCTGATTGGTCGGCCTCTGTTCCCTGGAGAAAGTGGAGTTGATCAACTGGTGGAAATAATAAAGATTTTGGGTACACCAACTAGAGAAGAAATCAGGTGCATGAATCCAAACTATTCTGAATTCAAATTCCCTCAGATAAAAGCTCATCCATGGCACAAGCCTTTTGGTAAGCGCATGCCACCTGAAGCTGNTGATCTTGNGTCAAGGNTGCTGCAGTACTCGNCAAATTTGCGTTGCACAGNTGTTGATGCTTGTG CTCATCCATTCTTTGATGAACTGCGGGATCCCAAGACCTGCTTGTCAAATGGACGATCATTACCACCCTTGTTCGACTTCTCANCTGCTGAATTGGAAGGCCTTCCTGTTGAGCTAGTCCACCGAATCATTCCTGAACATATGAGGAAGTGAAATGGAATGNNAGGAAAACACAANTTCGCTGCTAGAACAGCGGATAGGNGTGAGTGAGATGNTT GANGC AAACAT CCAT AACTTATGNAT GNATCANGAGNAGACTAGATNCACTGCCTTG CTAGATGTGCAAAGAGGNATGCTATAGAAGTTCCTCATCATCACTTNACATAAAGAGCGAGGCANTGGCTCATTCTGATGCAATTCCAAGAGGTAATGAGCAACTGAGATTGGCACGGCAACTCNCACATTTTCATCATGTGCCACCAGAGACGNTCATCTACTANGCTGCTGT ] [+] EMBL CB096369 [ TGGTGTTGATCAACTGGTGGAAATAATAAAGATTTTGGGTACACCAACTAGAGAAGAAATCAGGTGCATGAATCCAAACTATTCTGAATTCAAATTCCCTCAGATAAAAGCTCATCCATGGCACAAGCTTTTTGGTAAGCGCATGCCACCTGAAGCTGTTGATCTTGTGTCAAGGTTGCTGCAGTACTCGCCAAATTTGCGTTGCACAGCTGTTGATGCTTGTG CTCATCCATTCTTTGATGAACTGCGGGATCCCAAGACCTGCTTGTCAAATGGACGATCATTACCACCCTTGTTCGACTTCTCAGCTGCTGAATTGGAAGGCCTTCCTGTTGAGCTAGTCCACCGAATCATTCCTGAACATATGAGGAAGTGAAATGGAATGGCAGGAAAACACAATTTCGCTGTTAGAACAGCGGATAGGTGTGAGTGAGATGGTT GATGC AAACAT CCAC AACTTATGGAT GGATCAGGAGTAGACTAGATTCACTGCCTTG CTAGATGTGGAAAGAGGGATGCTATAGAAGTTCCTCATCATCACTTCACATAAAGAGCGAGGCAGTGGCTCATTCTGATGCAATTCCAAGAGGTAATGAGCAACTGAGATTGGCACGGCAACTCGCACATTTTCATCATGTGCCACCAGAGACGNTTATCTACTANGCTGCTGNTGTATAATCAGGTACATGATGAGTTTGCAGTTGNTTGNANACACTTGGTTNCCTGAACAAGCGATGAGAGAAATNCAGATTTCCGAAGNGCTTGCTTTG CTATCATGNAAAGCCTGGCCGGNACATGTCAATTTTGATTAGNGC ] [-] EMBL CB663266 [ TTTTGGGTACACCAACTAGAGAAGAAATCAGGTGCATGAATCCAAACTATTCTGAATTCAAATTCCCTCAGATAAAAGCTCATCCATGGCACAAGCTTTTTGGTAAGCGCATGCCACCTGAAGCTGTTGATCTTGTGTCAAGGTTGCTGCAGTACTCGCCAAATTTGCGTTGCACAGCTGTTGATGCTTGTG CTCATCCATTCTTTGATGAACTGCGGGATCCCAAGACCTGCTTGTCAAATGGACGATCATTACCACCCTTGTTCGACTTCTCAGCTGCTGAATTGGAAGGCCTTCCTGTTGAGCTAGTCCACCGAATCATTCCTGAACATATGAGGAAGTGAAACGGAATGGCAGGAAAACACAATTTCGCTGTTAGAACAGCGGATAGGTGTGAGTGAGATGGTT GATGC AAACAT CCAT AACTTATGGAT GGATCAGGAGTAGACTAGATTCACTGCCTTG CTAGATGTGGAAAGAGGGATGCTATAGAAGTTCCTCATCATCACTTCACATAAAGAGCGAGGCAGTGGCTCATTCTGATGCAATTCCAAGAGGTAATGAGCAACTGAGATTGGCACGGCAACTCGCACATTTTCATCATGTGCCACCAGAGACGTTTATCTACTAGGCTGCTGTTGTATAATCAGGTACATGCTGAGTTTGCAGTTGTTTGTAGACACTTGTTTCCCTGAACAAGCGATGAGAGAAAT ] [-] EMBL CB676690 [ AAATTTGCGTGGCACAGCTGTTGATGCTTGTG CTCATCCATTCTTTGATGAACTGCGGGATCCCAAGACTTGCTTGTCAAATGGACGATCATTACCACCCTTGTTCGACTTCTCAGCTGCTGAATTGGAAGGCCTTCCTGTTGAGCTAGTCCACCGAATCATTCCTGAACATATGAGGAAGTGAAACGGAATGGCAGGAAAACACAATTTCGCTGTTAGAACAGCGGATAGGTGTGAGTGAGATGGTT GATGC AAACAT CCAT AACTTATGGAT GGATCAGGAGTAGACTAGATTCACTGCCTTG CTAGATGTGGAAAGAGGGATGCTATAGAAGTTCCTCATCATCACTTCACATAAAGAGCGAGGCAGTGGCTCATTCTGATGCAATTCCAAGAGGTAATGAGCAACTGAGATTGGCACGGCAACTCGCACATTTTCATCATGTGCCACCAGAGACGTTTATCTACTAGGCTGCTGTTGTATAATCAGGTACATGCTGAGTGGGCAATTNTTTGTAAACA ] [-] EMBL CF309559 [ TTGATGAACTGCGGGATCCCAAGACCTGCTTGTCAAATGGACGATCATTACCACCCTTGTTCGACTTCTCAGCTGCTGAATTGGAAGGCCTTCCTGTTGAGCTAGTCCACCGAATCATTCCTGAACATATGAGGAAGTGAAACGGAGTGGCAGGAAAACACAATTTCGCTGTTAGAACAGCGGATAGGTGTGAGTGAGATGGTT GATGC AAACAT CCAT AACTTATGGAT GGATCAGGAGTAGACTAGATTCACTGCCTTG CTAGATGTGGAAAGAGGGATGCTATAGAAGTTCCTCATCATCACTTCACATAAAGAGCGAGGCAGTGGCTCATTCTGATGCAATTCCAAGAGGTAATGAGCAACTGAGATTGGCACGGCAACTCGCACATTTTCATCATGTGCCACCAGAGACGTTTATCTACTAGGCTGCTGTTGTATAATCAGGTACATGCTGAGTTTGCAGTTGTTTGTAGACACTTGTTTCCCTGAACAAGCGATGGGAGAAATCCAGA TTCCAAAGTGCTTGCTTTG CTATCAAA AAAaaaa ] [+] EMBL C22345 [ TGANATGGTTNGATGCAAAACATCCCATAAACTTATGGATGGGATCAGCAGTAGACTAGATTCACTGCCTTGCCTAGATGTGGAAAGAGGGATGCTATAGAAGTTCCTCATCATCACTTCACATAAAGAGCGAGGCAGTGGCTCATTCTGATGCAATTCCAAGAGGTAATGAGCAACTGAGATTGGCACGGCAACTCGCACATTTTCATCATGTGCCACCAGAGACGTTTATCTACTAGGCTGCTGTTGTATAATCAGGTACATGCTGAGTTTGCAGTTGTTTGTAGACACTTGTTTCCCTGAACAAGCGATGAGAGAAATCCAGA TTCCAAAGTGCTTGCTTTG CTATCAAA AAAaaa ] [-] EMBL AA750339 [ AAC CGC CA TTCATCATGTGCCACCAGAG CGTTTATCTACTAGGCTGCTGTTGTATAATCAGGTACATGCTGAGTTTGCAGTTGTTTGTAGACACTTGTTTCCCTGAACAAGCGATGAGAGAAATCCAGA TTCCAAAGTGCTTGCTTTGTCTATNATG AAAGCCTGCCCG ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||