These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13985#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 2002 fasta sequence [CACTTGTCTGACGGGCCCTCGCCTTCCCTTCGCTTCCTCCCCATCTCCGCCTCCGCCTCCGCCGCCGCGCCGCCGCCGGCGACGACTCCGACGAGCGACCCCTCCGCGGGCACCGGGTCGCCATGTACCGCGCCGCCTCCGGCCTCGGGGCCATCAAGCGGCATGGACTGGATGGTCAAATGTTGAATGTTGCGATTAGGTGTGCTAGCACAAGTGTTGCACAGAGGTCATCAGGTGGCTTCTGGACCTGGCTGACAGGTGCACGGTCAAATGCATTACCTCCTCCAGATTTTACACTTCCAGGGGTCACCATTCCACCTCCGCTACCTGACCTTGTGGAGCCTGGCAAGACAAAAATCACAACACTTGCAAATGGTGTAAAAATTGCTTCTGAGACAACTCCAGGACCATCTTGTTCAGTTGGAGTATATGTTAATT-GTGGTTCTGTACATGAAGCACCTGAAACACTAGGTGCCACTCAGCTGTTGAAGAAGATGGCCTATACAACCACTACAAACAGGAGCCATTTGCGTGTTGTGCGTGAAATCGAGGCAGTAGGTGGCAATGTGAAAGCATCTGCTAACCGTGAGATGATGAGCTACAGTTATGCAGCCCTGAAAACTTACATGCCTGAAATGGTTGAGGTGCTTATTGATTGTGTACGCAATCCTGCTTTTCTTGATTGGGAAGTCAAGGAACAGATAATGAAACTGAAGGCAGAGCTTGCAGAAGCTTCAAGTAACCCTGAAACTTTTCTTTTGGAGGCTCTTCATTCTACTGGTTATTCTGGTGCTTTGGCAACCCCTCTGATTGCCTCAGAATCCTCAGTTAGCCGATTGAATACGAATGTCCTAGAATACTTCTTAGCTGAGAATTACACTGCTCCCCGAATTGTTCTAGCTGCAACAGGTGTTGATCATGATGAATTGGTATCTATTGCTGAACCACTTCTGTCTGACATGCCTGGTGTAACT-GGACCAGCAAAGCCAAAGTCTACCTATGTTGGTGGGGAATATAGAAGAACTGCTGATTCATCGAACACAGATGTTGCTTTGGCATTTGAGGTCCCTGGTGGGTGGCTCAAAGAAAAAGAATTTGTAACAGTATCAGTTCTTCAGACCCTTCTTGGTGGCGGTGGCACATATTCCTGGGGAAGGCATGGAAAAGGCTTGCATTCAAGTCTAAATCATCTCGCAAATGAATTCGACCAGATTAGATCGATAGCTGCTTTCAAGGATGTTCACAGTAACACTGGCATTTTTGGAATTCATACATCTACTGATGCAGCATTCGTTCCTAAGGCTATTGACTTGGCAACCAGAGAGCTCACTTCTCTTGCCACTCCTGGAAAAGTTGACCAAACTCAACTTGACCGTGCTAAAGCGACAGCTAAATCAGCAATCTTGATGAACCTGGAATCAAAGGCATCAGCAACTGAAGACATGGGACGGCAAATATTGGCCTTTGGTGAAAGGAAACCTGTTGAGCACCTTCTCAAGGCTGTTGATGGTGTTACTCTGAAAGACATTACAGCCCTTGCTGAGAAAATCATATCATCACCATTGACAATGGCATCTCATGGAAACGTTCTGAACGTGCCAACTTATGATTCAGTCAGTGGCAAGTTTCGCTCGAAATGAGTAGTAATGTGGTCATTGTTTTCCTCCTCCTGGACAAGTTTTAACTGTTGATAGTTTTTCCTCAGGCCATTCATTGGCAGGGTTTCAGAGAGAAAAATAAGGAGCTTCATACAATTTTGATCATTTAACTCTGGATGATTGAGAATACC-ATATTTTACCTTTTTCTGCAACATTTGTCCACTTGAGTTGGAATTTTTTATGCTGTTTTCATCAGTTTTATGGGCCTGTAAATTTTAGGGCCCTCTTTCGGTGGCGGCCAGGGCCTGTACAAAATACCGGTCTCCTTGCAAAATCTTTGACACGAATGCTGAAACACTTGAATAAATATTCTATCTATACTCTTGCATGACAGTAAAAAAAAA] [+] EMBL AK101856 [CACTTGTCTGACGGGCCCTCGCCTTCCCTTCGCTTCCTCCCCATCTCCGCCTCCGCCTCCGCCGCCGCGCCGCCGCCGGCGACGACTCCGACGAGCGACCCCTCCGCGGGCACCGGGTCGCCATGTACCGCGCCGCCTCCGGCCTCGGGGCCATCAAGCGGCATGGACTGGATGGTCAAATGTTGAATGTTGCGATTAGGTGTGCTAGCACAAGTGTTGCACAGAGGTCATCAGGTGGCTTCTGGACCTGGCTGACAGGTGCACGGTCAAATGCATTACCTCCTCCAGATTTTACACTTCCAGGGGTCACCATTCCACCTCCGCTACCTGACCTTGTGGAGCCTGGCAAGACAAAAATCACAACACTTGCAAATGGTGTAAAAATTGCTTCTGAGACAACTCCAGGACCATCTTGTTCAGTTGGAGTATATGTTAATT GTGGTTCTGTACATGAAGCACCTGAAACACTAGGTGCCACTCAGCTGTTGAAGAAGATGGCCTATACAACCATTACAAACAGGAGCCATTTGCGTGTTGTGCGTGAAATCGAGGCAGTAGGTGGCAATGTGAAAGCATCTGCTAACCGTGAGATGATGAGCTACAGTTATGCAGCCCTGAAAACTTACATGCCTGAAATGGTTGAGGTGCTTATTGATTGTGTACGCAATCCTGCTTTTCTTGATTGGGAAGTCAAGGAACAGATAATGAAACTGAAGGCAGAGCTTGCAGAAGCTTCAAGTAACCCTGAAACTTTTCTTTTGGAGGCTCTTCATTCTACTGGTTATTCTGGTGCTTTGGCAACCCCTCTGATTGCCTCAGAATCCTCAGTTAGCCGATTGAATACGAATGTCCTAGAATACTTCTTAGCTGAGAATTACACTGCTCCCCGAATTGTTCTAGCTGCAACAGGTGTTGATCATGATGAATTGGTATCTATTGCTGAACCACTTCTGTCTGACATGCCTGGTGTAACT GGACCAGCAAAGCCAAAGTCTACCTATGTTGGTGGGGAATATAGAAGAACTGCTGATTCATCGAACACAGATGTTGCTTTGGCATTTGAGGTCCCTGGTGGGTGGCTCAAAGAAAAAGAATTTGTAACAGTATCAGTTCTTCAGACCCTTCTTGGTGGCGGTGGCACATATTCCTGGGGAAGGCATGGAAAAGGCTTGCATTCAAGTCTAAATCATCTCGCAAATGAATTCGACCAGATTAGATCGATAGCTGCTTTCAAGGATGTTCACAGTAACACTGGCATTTTTGGAATTCATACATCTACTGATGCAGCATTCGTTCCTAAGGCTATTGACTTGGCAACCAGAGAGCTCACTTCTCTTGCCACTCCTGGAAAAGTTGACCAAACTCAACTTGACCGTGCTAAAGCGACAGCTAAATCAGCAATCTTGATGAACCTGGAATCAAAGGCATCAGCAACTGAAGACATGGGACGGCAAATATTGGCCTTTGGTGAAAGGAAACCTGTTGAGCACCTTCTCAAGGCTGTTGATGGTGTTACTCTGAAAGACATTACAGCCCTTGCTGAGAAAATCATATCATCACCATTGACAATGGCATCTCATGGAAACGTTCTGAACGTGCCAACTTATGATTCAGTCAGTGGCAAGTTTCGCTCGAAATGAGTAGTAATGTGGTCATTGTTTTCCTCCTCCTGGACAAGTTTTAACTGTTGATAGTTTTTCCTCAGGCCATTCATTGGCAGGGTTTCAGAGAGAAAAATAAGGAGCTTCATACAATTTTGATCATTTAACTCTGGATGATTGAGAATACC ATATTTTACCTTTTTCTGCAACATTTGTCCACTTGAGTTGGAATTTTTTATGCTGTTTTCATCAGTTTTATGGGCCTGTAAATTTTAGGGCCCTCTTTCGGTGGCGGCCAGGGCCTGTACAAAATACCGGTCTCCTTGCAAAATCTTTGACACGAATGCTGAAACACTTGAATAAATATTCTATCTATACTCTTGCATGACAGT ] [+] EMBL AK071930 [ TCTGACGGGCCCTCGCCTTCCCTTCGCTTCCTCCCCATCTCCGCCTCCGCCTCCGCCGCCGCGCCGCCGCCGGCGACGACTCCGACGAGCGACCCCTCCGCGGGCACCGGGTCGCCATGTACCGCGCCGCCTCCGGCCTCGGGGCCATCAAGCGGCATGGACTGGATGGTCAAATGTTGAATGTTGCGATTAGGTGTGCTAGCACAAGTGTTGCACAGAGGTCATCAGGTGGCTTCTGGACCTGGCTGACAGGTGCACGGTCAAATGCATTACCTCCTCCAGATTTTACACTTCCAGGGGTCACCATTCCACCTCCGCTACCTGACCTTGTGGAGCCTGGCAAGACAAAAATCACAACACTTGCAAATGGTGTAAAAATTGCTTCTGAGACAACTCCAGGACCATCTTGTTCAGTTGGAGTATATGTTAATT GTGGTTCTGTACATGAAGCACCTGAAACACTAGGTGCCACTCAGCTGTTGAAGAAGATGGCCTATACAACCACTACAAACAGGAGCCATTTGCGTGTTGTGCGTGAAATCGAGGCAGTAGGTGGCAATGTGAAAGCATCTGCTAACCGTGAGATGATGAGCTACAGTTATGCAGCCCTGAAAACTTACATGCCTGAAATGGTTGAGGTGCTTATTGATTGTGTACGCAATCCTGCTTTTCTTGATTGGGAAGTCAAGGAACAGATAATGAAACTGAAGGCAGAGCTTGCAGAAGCTTCAAGTAACCCTGAAACTTTTCTTTTGGAGGCTCTTCATTCTACTGGTTATTCTGGTGCTTTGGCAACCCCTCTGATTGCCTCAGAATCCTCAGTTAGCCGATTGAATACGAATGTCCTAGAATACTTCTTAGCTGAGAATTACACTGCTCCCCGAATTGTTCTAGCTGCAACAGGTGTTGATCATGATGAATTGGTATCTATTGCTGAACCACTTCTGTCTGACATGCCTGGTGTAACT GGACCAGCAAAGCCAAAGTCTACCTATGTTGGTGGGGAATATAGAAGAACTGCTGATTCATCGAACACAGATGTTGCTTTGGCATTTGAGGTCCCTGGTGGGTGGCTCAAAGAAAAAGAATTTGTAACAGTATCAGTTCTTCAGACCCTTCTTGGTGGCGGTGGCACATATTCCTGGGGAAGGCATGGAAAAGGCTTGCATTCAAGTCTAAATCATCTCGCAAATGAATTCGACCAGATTAGATCGATAGCTGCTTTCAAGGATGTTCACAGTAACACTGGCATTTTTGGAATTCATACATCTACTGATGCAGCATTCGTTCCTAAGGCTATTGACTTGGCAACCAGAGAGCTCACTTCTCTTGCCACTCCTGGAAAAGTTGACCAAACTCAACTTGACCGTGCTAAAGCGACAGCTAAATCAGCAATCTTGATGAACCTGGAATCAAAGGCATCAGCAACTGAAGACATGGGACGGCAAATATTGGCCTTTGGTGAAAGGAAACCTGTTGAGCACCTTCTCAAGGCTGTTGATGGTGTTACTCTGAAAGACATTACAGCCCTTGCTGAGAAAATCATATCATCACCATTGACAATGGCATCTCATGGAAACGTTCTGAACGTGCCAACTTATGATTCAGTCAGTGGCAAGTTTCGCTCGAAATGAGTAGTAATGTGGTCATTGTTTTCCTCCTCCTGGACAAGTTTTAACTGTTGATAGTTTTTCCTCAGGCCATTCATTGGCAGGGTTTCAGAGAGAAAAATAAGGAGCTTCATACAATTTTGATCATTTAACTCTGGATGATTGAGAATACC ATATTTTACCTTTTTCTGCAACATTTGTCCACTTGAGTTGGAATTTTTTATGCTGTTTTCATCAGTTTTATGGGCCTGTAAATTTTAGGGCCCTCTTTCGGTGGCGGCCAGGGCCTGTACAAAATACCGGTCTCCTTGCAAAATCTTTGACACGAATGCTGAAACACTTGAATAAATATTCTATCTATA ] [+] EMBL CF322464 [ CGCCGCCGCCGGCGACGACTCCGACGAGCGACCCCTCCGCGGGCACCGGGTCGCCATGTACCGCGCCGCCTCCGGCCTCGGGGCCATCAAGCGGCATGGACTGGATGGTCAAATGTTGAATGTTGCGATTAGGTGTGCTAGCACAAGTGTTGCACAGAGGTCATCAGGTGGCTTCTGGACCTGGCTGACAGGTGCACGGTCAAATGCATTACCTCCTCCAGATTTTACACTTCCAGGGGTCACCATTCCACCTCCGCTACCTGACCTTGTGGAGCCTGGCAAGACAAAAATCACAACACTTGCAAATGGTGTAAAAATTGCTTCTGAGACAACTCCAGGACCATCTTGTTCAGTTGGAGTATATGTTAATTGGTGGTTCTGTACATGAAGCACCTGAAACACTAGGTGCCACTCAGCTGTTGAAGAAGATGGCCTATACAACCACTACAAACAGGAGCCATTTGCGTGTTGTGCGTGAAATCGAGGCAGTAGGTGGCAATGTGAAAGCATCTGCTAACCGTGAGATGATGAGCTACAGTTATGCAGCCCT ] [+] EMBL CB661397 [ CTCCGACGAGCGACCCCTCCGCGGGCACCGGGTCGCCATGTACCGCGCCGCCTCCGGCCTCGGGGCCATCAAGCGGCATGGACTGGATGGTCAAATGTTGAATGTTGCGATTAGGTGTGCTAGCACAAGTGTTGCACAGAGGTCATCAGGTGGCTTCTGGACCTGGCTGACAGGTGCACGGTCAAATGCATTACCTCCTCCAGATTTTACACTTCCAGGGGTCACCATTCCACCTCCGCTACCTGACCTTGTGGAGCCTGGCAAGACAAAAATCACAACACTTGCAAATGGTGTAAAAATTGCTTCTGAGACAACTCCAGGACCATCTTGTTCAGTTGGAGTATATGTTAATT GTGGTTCTGTACATGAAGCACCTGAAACACTAGGTGCCACTCAGCTGTTGAAGAAGATGGCCTATACAACCACTACAAACAGGAGCCATTTGCGTGTTGTGCGTGAAATCGAGGCAGTAGGTGGCAATGTGAAAGCATCTGCTAACCGTGAGATGATGAGCTACAGTTATGCAGCCCTGAAAACTTACATGCCTGAAATGGTTGAGGTGCTTATTGATTGTGTACGCAATCCTGCTTTTCTTGATTGGGAAGTCAAGGAACAGATAATGAAACTGAAGGCAGAGCTTGCAGAAGCTTCAAGTAACCCTGAAACTTTTCTTTTGGAGGCTCTTCATTCTACTGGTTATTCTGGTGCTTTGGCAACCCCTCTGATTGCCTCAGAATCCTCAGTTAGCCGATTGAATACGAATGTCCTAGAATACTTCTTAGCTGAGAATTACACTGCTCCCCGAATTGTTCTAGCTGCAACAGGTGTTGATCATGATGAATTGGTATCTATTGCTGAACCA ] [+] EMBL CF323634 [ TGAAATCGAGGCAGTAGGTGGCAATGTGAAAGCATCTGCTAACCGTGAGATGATGAGCTACAGTTATGCAGCCCTG AATTTTTTTGCCTGAAATGGTTGAGGTGCTTATTGATTGTGTACGCAATCCTGCTTTTCTTGATTGGGAAGTCAAGGAACAGATAATGAAACTGAAGGCAGAGCTTGCAGAAGCTTCAAGTAACCCTGAAACTTTTCTTTTGGAGGCTCTTCATTCTACTGGTTATTCTGGTGCTTTGGCAACCCCTCTGATTGCCTCAGAATCCTCAGTTAGCCGATTGAATACGAATGTCCTAGAATACTTCTTAGCTGAGAATTACACTGCTCCCCGAATTGTTCTAGCTGCAACAGGTGTTGATCATGATGAATTGGTATCTATTGCTGAACCACTTCTGTCTGACATGCCTGGTGTAACT GGACCAGCAAAGCCAAAGTCTACCTATGTTGGTGGGGAATATAGAAGAACTGCTGATTCATCGAACACAGATGTTGCTTTGGCATTTGAGGTCCCTGGTGGGTGGCTCAAAGAAAAAGAATTTGTAACAGTATCAGTTCTTCAGACCCTTCTTGGTGGCGGTGGCAC ] [+] EMBL CA999664 [ CTTACATGCCTGAAATGGTTGAGGTGCTTATTGATTGTGTACGCAATCCTGCTTTTCTTGATTGGGAAGTCAAGGAACAGATAATGAAACTGAAGGCAGAGCTTGCAGAAGCTTCAAGTAACCCTGAAACTTTTCTTTTGGAGGCTCTTCATTCTACTGGTTATTCTGGTGCTTTGGCAACCCCTCTGATTGCCTCAGAATCCTCAGTTAGCCGATTGAATACGA ] [+] EMBL AU065773 [ AGGCAGAGCTTGCAGAAGCTTCAAGTAACCCTGAAACTTTTCTTTTGGAGGCTCTTCATTCTACTGGTTATTCTGGTGCTTTGGCAACCCCTCTGATTGCCTCAGAATCCTCAGTTAGCCGATTGAATACGAATGTCCTAGAATACTTCTTAGCTGAGAATTACACTGCTCCCCGAATTGTTCTAGCTGCAACAGGTGTTGATCATGATGAATTGGTATCTATTGCTGAACCACTTCTGTCTGACATGCCTGGTGTAACT GGACCAGCAAAGCCAAAGTCTACCTATGTTGGTGGGGGATATAGAAGAACTNCTGATTCAT ] [+] EMBL AU183215 [ TGCTCCCCGAATTGTTCTAGCTGCAACAGGTGTTGATCATGATGAATTGGTATCTATTGCTGAACCACTTCTGTCTGACATGCCTGGTGTAACTAGGACCAGCAAAGCCAAAGTCTACCTATGTTGGTGGGGAATATAGAAGAACTGCTGATTCATCGAACACAGATGTTGCTTTGGCATTTGAGGTCCCTGGTGGGTGGCTCAAAGAAAAAGAATTTGTAACAGTATCAGTTCTTCAGACCCTTCTTGGTGGCGGTGGCACATATTCCTGGGGAAGGCATGGAAAAGGCTTGCATTCAAGTCTAAATCATCTCGCAAATGAATTCGACCAGATTAGATCGATAGCTGCTTTCAAGGATGTTCACAGTAACACTGGCATTTTTGGAATTCATACATCTACTGATGCAGCATTCGTTCCTAAGGCTATT ] [-] EMBL CB661398 [ TGCTGATTCATCGAACACAGATGTTGCTTTGGCATTTGAGGTCCCTGGTGGGTGGCTCAAAGAAAAAGAATTTGTAACAGTATCAGTTCTTCAGACCCTTCTTGGTGGCGGTGGCACATATTCCTGGGGAAGGCATGGAAAAGGCTTGCATTCAAGTCTAAATCATCTCGCAAATGAATTCGACCAGATTAGATCGATAGCTGCTTTCAAGGATGTTCACAGTAACACTGGCATTTTTGGAATTCATACATCTACTGATGCAGCATTCGTTCCTAAGGCTATTGACTTGGCAACCAGAGAGCTCACTTCTCTTGCCACTCCTGGAAAAGTTGACCAAACTCAACTTGACCGTGCTAAAGCGACAGCTAAATCAGCAATCTTGATGAACCTGGAATCAAAGGCATCAGCAACTGAAGACATGGGACGGCAAATATTGGCCTTTGGTGAAAGGAAACCTGTTGAGCACCTTCTCAAGGCTGTTGATGGTGTTACTCTGAAAGACATTACAGCCCTTGCTGAGAAAATCATATCATCACCATTGACAATGGCATCTCATGGAAACGTTCTGAACGTGCCAACTTATGATTCAGTCAGTGGCAAGTTTCGCTCGAAATGAGTAGTAATGTGGTCATTGTTTTCCTCCTCCTGGACAAGTTTTAACTGTTGATAGTTTTTCCTCAGGCCATTCATTGGCAGGGTTTCAGAGAGAAAAATAAGGAGCTTCATACAATTTTGATCATTTAACTCTGGATGATTGAGAATACC ATATTTTACC ] [+] EMBL AU172947 [ AGGCATCAGCAACTGAAGACATGGGACGGCAAATATTGGCCTTTGGTGAAAGGAAACCTGTTGAGCACCTTNTCAAGGCTGTTGATGGTGTTACTCTGAAAGACATTACAGCCCTTGCTGAGAAAATCATATCATCACCATTGACAATGGCATCTCATGGAAACGTTCTGAACGTGCCAACTTATGATTCAGTCAGTGGCAAGTTTCGCTCGAAATGAGTAGTAATGTGGTCATTGTTTTCCTCCTCCTGGACAAGTTTTAACTGTTGATAGTTTTTCCTCAGNAAANTCATTGGCAGGGTTTCAGAGAGAAAAATAAGGAGCTTCATACAATTTTGATCATTTAACTCTGGATGATTGAGAATACCTATATTTTACCTTTTTCTGCAACATTTGTCCACTTGAGTTGGAATTTaaaaaaaa ] [+] EMBL AU183216 [ GGAAACGTTCTGAACGTGCCAACTTATGATTCAGTCAGTGGCAAGTTTCGCTCGAAATGAGTAGTAATGTGGTCATTGTTTTCCTCCTCCTGGACAAGTTTTAACTGTTGATAGTTTTTCCTCAGGCCATTCATTGGCAGGGTTTCAGAGAGAAAAATAAGGAGCTTCATACAATTTTGATCATTTAACTCTGGATGATTGAGAATACC ATATTTTACCTTTTTCTGCAACATTTGTCCACTTGAGTTGGAATTTTTTATGCTGTTTTCATCAGTTTTATGGGCCTGTAAATTTTAGGGCCCTCTTTCGGTGGCGGCCAGGGCCTGTACAAAATACCGGTCTCCTTGCAAAATCTTTGACACGAATGCTGAAACACTTGAATAAATATTCTATCTATACTCTTGCATGCCAAAAAAAAAAAA] consensusID : consensus_13985#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 937 fasta sequence [TGGGTGGCTCAAAGAAAAAGAATTTGTAACAGTATCAGTTCTTCAGACCCTTCTTGGTGGCGGTGGCACATATTCCTGGGGAAGGCATGGAAAAGGCTTGCATTCAAGTCTAAATCATCTCGCAAATGAATTCGACCAGATTAGATCGATAGCTGCTTTCAAGGATGTTCACAGTAACACTGGCATTTTTGGAATTCATACATCTACTGATGCAGCATTCGTTCCTAAGGCTATTGACTTGGCAACCAGAGAGCTCACTTCTCTTGCCACTCCTGGAAAAGTTGACCAAACTCAACTTGACCGTGCTAAAGCGACAGCTAAATCAGCAATCTTGATGAACCTGGAATCAAAGGCATCAGCAACTGAAGACATGGGACGGCAAATATT-GGCCTTTGGTGAAAGGAAACCTGTTGAGCACCTT-CTCAAGGCTGTTGATGGTGTTACT-CTGAAAGACATTACAGCCCTTGCTGAGAAAATCATATCATCACCATTGACAATGGCATCTCATGGAAACGTTCTGAACGTGCCAACTTATGATTCAGTCAGTGGCAAGTTTCGCTCGAAATGAGTAGTAATGTGGTCATTGTTTTCCTCCTCCTGGACAAGTTTTACTGTTGATAGTTTTCCTCAGGCCATTCATTGGCAGGGTTCAGAAAGAAAATAGGAGCTCATACATTTTGACATTAACTCTGATGATGAGAACCCAATTTCCTTTTCTGAACATTGTCCATTGAGTGGGATTTTTTGCTGGTTATCAGTTATGGCCCGAAATTTAGGCCTCTTCGGGGGGGGGCCCGTCCAATCGCCTTGTGAGCTTTACCCCCTCTGCCGGTGTCACTGGACTGGAAACCTGGTGCCACTACCGCTCCCAAACCTATTCCTGACTAACAAAGCCCACTGCCCTTCCCCGTCCCTCTTTGTATGACCCCTTACATTA] [+] EMBL BE039711 [TGGGTGGCTCAAAGAAAAAGAATTTGTAACAGTATCAGTTCTTCAGACCCTTCTTGGTGGCGGTGGCACATATTCCTGGGGAAGGCATGGAAAAGGCTTGCATTCAAGTCTAAATCATCTCGCAAATGAATTCGACCAGATTAGATCGATAGCTGCTTTCAAGGATGTTCACAGTAACACTGGCATTTTTGGAATTCATACATCTACTGATGCAGCATTCGTTCCTAAGGCTATTGACTTGGCAACCAGAGAGCTCACTTCTCTTGCCACTCCTGGAAAAGTTGACCAAACTCAACTTGACCGTGCTAAAGCGACAGCTAAATCAGCAATCTTGATGAACCTGGAATCAAAGGCATCAGCAACTGAAGACATGGGACGGCAAATATT GGCCTTTGGTGAAAGGAAACCTGTTGAGCACCTT CTCAAGGCTGTTGATGGTGTTACT CTGAAAGACATTACAGCCCTTGCTGAGAAAATCATATCATCACCATTGACAATGGCATCTCATGGAAACGTTCTGAACGTGCCAACTTATGATTCAGTCAGTGGCAAGTTTCGCTCGAAATGAGTAGTAATGTGGTCATTGTTTTCCTCCTCCTGGACAAGTTTTACTGTTGATAGTTTTCCTCAGGCCATTCATTGGCAGGGTTCAGAAAGAAAATAGGAGCTCATACATTTTGACATTAACTCTGATGATGAGAACCCAATTTCCTTTTCTGAACATTGTCCATTGAGTGGGATTTTTTGCTGGTTATCAGTTATGGCCCGAAATTTAGGCCTCTTCGGGGGGGGGCCCGTCCAATCGCCTTGTGAGCTTTACCCCCTCTGCCGGTGTCACTGGACTGGAAACCTGGTGCCACTACCGCTCCCAAACCTATTCCTGACTAACAAAGCCCACTGCCCTTCCCCGTCCCTCTTTGTATGACCCCTTACATTA] [+] EMBL AU172946 [ GGTGGCTCAAAGAAAAAGAATTTGTAACAGTATCAGNTCTTCAGACCCTTCTTGGTGGCGGTGGCACATATTCCTGGGGAAGGCATGGAAAAGGCTTGCATTCAAGTCTAAATCATCTCGCAAATGAATTCGACCAGATTTTTTCGATAGCTGCTTTCAAGGATGTTCACAGTAACACTGGCATTTTTGGAATTCATACATCTACTGATGCANCATTCGTTCCTAAGGCTATTGACTTGGCAACCAGAGAGCTCACTTCTCTTGCCACTCCTGGAAAAGTTGACCAAACTCAACTTGACCGTGCTAAAGCGACAGCTAAATCAGCAATCTTGATGAACCTGGAATCAAAGGCATCAGCANCTGAAGACATGGGACGGCAAATATTAGGNCTTTGGTGAAAGGAAACCTGTTGAGCACCTTNCTCAAGGCTGTTGATGGTGTTACTCCTGA ] consensusID : consensus_13985#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 317 fasta sequence [ACAAGTTTTAANCTGGTTGANAANTTTTNCCCNNAGGCCATTCATTGGCAGGGTTTCNGAGAGAAAAATAAGGAGCNTCATACAANTTTGAACATTTAACNCNGGATGATTGAGAATACCATATTTTACCTTTTTCTGCAANATTTGTCCNCTTGAGTTGGAATTTTTTATGCTGTTTTCANCAGTTTTATGGGCCTGTAAATTTTNGGGCCCNCTTTCGGTGGCGGCCAGGGCCTGTACAAAATACNGGTCNCCTTNCAAAATCTTTGACNCGAATGCTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AU090574 [ACAAGTTTTAANCTGGTTGANAANTTTTNCCCNNAGGCCATTCATTGGCAGGGTTTCNGAGAGAAAAATAAGGAGCNTCATACAANTTTGAACATTTAACNCNGGATGATTGAGAATACCATATTTTACCTTTTTCTGCAANATTTGTCCNCTTGAGTTGGAATTTTTTATGCTGTTTTCANCAGTTTTATGGGCCTGTAAATTTTNGGGCCCNCTTTCGGTGGCGGCCAGGGCCTGTACAAAATACNGGTCNCCTTNCAAAATCTTTGACNCGAATGCTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13985#0 CACTTGTCTGACGGGCCCTCGCCTTCCCTTCGCTTCCTCCCCATCTCCGCCTCCGCCTCC 60 consensus_13985#2 ------------------------------------------------------------ consensus_13985#1 ------------------------------------------------------------ consensus_13985#0 GCCGCCGCGCCGCCGCCGGCGACGACTCCGACGAGCGACCCCTCCGCGGGCACCGGGTCG 120 consensus_13985#2 ------------------------------------------------------------ consensus_13985#1 ------------------------------------------------------------ consensus_13985#0 CCATGTACCGCGCCGCCTCCGGCCTCGGGGCCATCAAGCGGCATGGACTGGATGGTCAAA 180 consensus_13985#2 ------------------------------------------------------------ consensus_13985#1 ------------------------------------------------------------ consensus_13985#0 TGTTGAATGTTGCGATTAGGTGTGCTAGCACAAGTGTTGCACAGAGGTCATCAGGTGGCT 240 consensus_13985#2 ------------------------------------------------------------ consensus_13985#1 ------------------------------------------------------------ consensus_13985#0 TCTGGACCTGGCTGACAGGTGCACGGTCAAATGCATTACCTCCTCCAGATTTTACACTTC 300 consensus_13985#2 ------------------------------------------------------------ consensus_13985#1 ------------------------------------------------------------ consensus_13985#0 CAGGGGTCACCATTCCACCTCCGCTACCTGACCTTGTGGAGCCTGGCAAGACAAAAATCA 360 consensus_13985#2 ------------------------------------------------------------ consensus_13985#1 ------------------------------------------------------------ consensus_13985#0 CAACACTTGCAAATGGTGTAAAAATTGCTTCTGAGACAACTCCAGGACCATCTTGTTCAG 420 consensus_13985#2 ------------------------------------------------------------ consensus_13985#1 ------------------------------------------------------------ consensus_13985#0 TTGGAGTATATGTTAATTGTGGTTCTGTACATGAAGCACCTGAAACACTAGGTGCCACTC 480 consensus_13985#2 ------------------------------------------------------------ consensus_13985#1 ------------------------------------------------------------ consensus_13985#0 AGCTGTTGAAGAAGATGGCCTATACAACCACTACAAACAGGAGCCATTTGCGTGTTGTGC 540 consensus_13985#2 ------------------------------------------------------------ consensus_13985#1 ------------------------------------------------------------ consensus_13985#0 GTGAAATCGAGGCAGTAGGTGGCAATGTGAAAGCATCTGCTAACCGTGAGATGATGAGCT 600 consensus_13985#2 ------------------------------------------------------------ consensus_13985#1 ------------------------------------------------------------ consensus_13985#0 ACAGTTATGCAGCCCTGAAAACTTACATGCCTGAAATGGTTGAGGTGCTTATTGATTGTG 660 consensus_13985#2 ------------------------------------------------------------ consensus_13985#1 ------------------------------------------------------------ consensus_13985#0 TACGCAATCCTGCTTTTCTTGATTGGGAAGTCAAGGAACAGATAATGAAACTGAAGGCAG 720 consensus_13985#2 ------------------------------------------------------------ consensus_13985#1 ------------------------------------------------------------ consensus_13985#0 AGCTTGCAGAAGCTTCAAGTAACCCTGAAACTTTTCTTTTGGAGGCTCTTCATTCTACTG 780 consensus_13985#2 ------------------------------------------------------------ consensus_13985#1 ------------------------------------------------------------ consensus_13985#0 GTTATTCTGGTGCTTTGGCAACCCCTCTGATTGCCTCAGAATCCTCAGTTAGCCGATTGA 840 consensus_13985#2 ------------------------------------------------------------ consensus_13985#1 ------------------------------------------------------------ consensus_13985#0 ATACGAATGTCCTAGAATACTTCTTAGCTGAGAATTACACTGCTCCCCGAATTGTTCTAG 900 consensus_13985#2 ------------------------------------------------------------ consensus_13985#1 ------------------------------------------------------------ consensus_13985#0 CTGCAACAGGTGTTGATCATGATGAATTGGTATCTATTGCTGAACCACTTCTGTCTGACA 960 consensus_13985#2 ------------------------------------------------------------ consensus_13985#1 ------------------------------------------------------------ consensus_13985#0 TGCCTGGTGTAACTGGACCAGCAAAGCCAAAGTCTACCTATGTTGGTGGGGAATATAGAA 1020 consensus_13985#2 ------------------------------------------------------------ consensus_13985#1 ------------------------------------------------------------ consensus_13985#0 GAACTGCTGATTCATCGAACACAGATGTTGCTTTGGCATTTGAGGTCCCTGGTGGGTGGC 1080 consensus_13985#2 ------------------------------------------------------------ consensus_13985#1 ----------------------------------------------------TGGGTGGC 8 consensus_13985#0 TCAAAGAAAAAGAATTTGTAACAGTATCAGTTCTTCAGACCCTTCTTGGTGGCGGTGGCA 1140 consensus_13985#2 ------------------------------------------------------------ consensus_13985#1 TCAAAGAAAAAGAATTTGTAACAGTATCAGTTCTTCAGACCCTTCTTGGTGGCGGTGGCA 68 consensus_13985#0 CATATTCCTGGGGAAGGCATGGAAAAGGCTTGCATTCAAGTCTAAATCATCTCGCAAATG 1200 consensus_13985#2 ------------------------------------------------------------ consensus_13985#1 CATATTCCTGGGGAAGGCATGGAAAAGGCTTGCATTCAAGTCTAAATCATCTCGCAAATG 128 consensus_13985#0 AATTCGACCAGATTAGATCGATAGCTGCTTTCAAGGATGTTCACAGTAACACTGGCATTT 1260 consensus_13985#2 ------------------------------------------------------------ consensus_13985#1 AATTCGACCAGATTAGATCGATAGCTGCTTTCAAGGATGTTCACAGTAACACTGGCATTT 188 consensus_13985#0 TTGGAATTCATACATCTACTGATGCAGCATTCGTTCCTAAGGCTATTGACTTGGCAACCA 1320 consensus_13985#2 ------------------------------------------------------------ consensus_13985#1 TTGGAATTCATACATCTACTGATGCAGCATTCGTTCCTAAGGCTATTGACTTGGCAACCA 248 consensus_13985#0 GAGAGCTCACTTCTCTTGCCACTCCTGGAAAAGTTGACCAAACTCAACTTGACCGTGCTA 1380 consensus_13985#2 ------------------------------------------------------------ consensus_13985#1 GAGAGCTCACTTCTCTTGCCACTCCTGGAAAAGTTGACCAAACTCAACTTGACCGTGCTA 308 consensus_13985#0 AAGCGACAGCTAAATCAGCAATCTTGATGAACCTGGAATCAAAGGCATCAGCAACTGAAG 1440 consensus_13985#2 ------------------------------------------------------------ consensus_13985#1 AAGCGACAGCTAAATCAGCAATCTTGATGAACCTGGAATCAAAGGCATCAGCAACTGAAG 368 consensus_13985#0 ACATGGGACGGCAAATATTGGCCTTTGGTGAAAGGAAACCTGTTGAGCACCTTCTCAAGG 1500 consensus_13985#2 ------------------------------------------------------------ consensus_13985#1 ACATGGGACGGCAAATATTGGCCTTTGGTGAAAGGAAACCTGTTGAGCACCTTCTCAAGG 428 consensus_13985#0 CTGTTGATGGTGTTACTCTGAAAGACATTACAGCCCTTGCTGAGAAAATCATATCATCAC 1560 consensus_13985#2 ------------------------------------------------------------ consensus_13985#1 CTGTTGATGGTGTTACTCTGAAAGACATTACAGCCCTTGCTGAGAAAATCATATCATCAC 488 consensus_13985#0 CATTGACAATGGCATCTCATGGAAACGTTCTGAACGTGCCAACTTATGATTCAGTCAGTG 1620 consensus_13985#2 ------------------------------------------------------------ consensus_13985#1 CATTGACAATGGCATCTCATGGAAACGTTCTGAACGTGCCAACTTATGATTCAGTCAGTG 548 consensus_13985#0 GCAAGTTTCGCTCGAAATGAGTAGTAATGTGGTCATTGTTTTCCTCCTCCTGGACAAGTT 1680 consensus_13985#2 -----------------------------------------------------ACAAGTT 7 consensus_13985#1 GCAAGTTTCGCTCGAAATGAGTAGTAATGTGGTCATTGTTTTCCTCCTCCTGGACAAGTT 608 ******* consensus_13985#0 TTAACT--GTTGATAGTTTTTCC--TCAGGCCATTCATTGGCAGGGTTTCAGAGAGAAAA 1736 consensus_13985#2 TTAANCTGGTTGANAANTTTTNCCCNNAGGCCATTCATTGGCAGGGTTTCNGAGAGAAAA 67 consensus_13985#1 TTACT---GTTGATAGTTTTCC---TCAGGCCATTCATTGGCAGGGTT-CAGAAAGAAAA 661 *** ***** * *** ********************* * ** ****** consensus_13985#0 ATAAGGAGCTTCATACAATTTTGATCATTTAACTCTGGATGATTGAGAATACCATATTTT 1796 consensus_13985#2 ATAAGGAGCNTCATACAANTTTGAACATTTAACNCNGGATGATTGAGAATACCATATTTT 127 consensus_13985#1 T--AGGAGCT-CATACA--TTTTGACATT-AACTCTG-ATGAT---GAGAACCCAATTT- 710 ****** ****** *** **** *** * * ***** ** *** **** consensus_13985#0 ACCTTTTTCTGCAACATTTGTCCACTTGAGTTGGAATTTTTTATGCTGTTTTCATCAGTT 1856 consensus_13985#2 ACCTTTTTCTGCAANATTTGTCCNCTTGAGTTGGAATTTTTTATGCTGTTTTCANCAGTT 187 consensus_13985#1 --CCTTTTCTG-AACATT-GTCCA-TTGAGTGGGATTTTTT---GCTGGTT--ATCAGTT 760 * ******* ** *** **** ****** *** ***** **** ** * ***** consensus_13985#0 TTATGGGCCTGTAAATTTTAGGGCCCTCTTTCGGTGGC--GGCCAGGGCCTGTACAAAAT 1914 consensus_13985#2 TTATGGGCCTGTAAATTTTNGGGCCCNCTTTCGGTGGC--GGCCAGGGCCTGTACAAAAT 245 consensus_13985#1 AT---GGCCCG-AAATTTAGGCCTCTTCGGGGGGGGGCCCGTCCAATCGCCTTGTGAGCT 816 * **** * ****** * * * ** *** * *** * * * * consensus_13985#0 ACCGGTCTCCTTGCAAAATCTTTG-ACACGAATGCTGAAACACTTGAATAAATATTCTAT 1973 consensus_13985#2 ACNGGTCNCCTTNCAAAATCTTTG-ACNCGAATGCTGAAAAAAAAAAAAAAAAA------ 298 consensus_13985#1 TTACCCCCTCTGCCGGTGTCACTGGACTGGAAACCTGGTGCCACTACCGCTCCCAAACCT 876 * ** * ** ** ** *** *** consensus_13985#0 CTATACTCTTGCATGACAGTAAAAAAAAA------------------------------- 2002 consensus_13985#2 ----------AAAAAAAAAAAAAAAAAAA------------------------------- 317 consensus_13985#1 ATTCCTGACTAACAAAGCCCACTGCCCTTCCCCGTCCCTCTTTGTATGACCCCTTACATT 936 * * consensus_13985#0 - consensus_13985#2 - consensus_13985#1 A 937 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||