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Oryza sativa
cluster # 14006 cluster # 14006       Sequences # 14       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_14006#0 length = 1404 sequences # 13  
consensus_14006#1 length = 564 sequences # 1  

consensusID : consensus_14006#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 13
consensus length = 1404
fasta sequence
                              [GTAGAAACATTTCCCCCTTCTTCTCCTCTCGCTTCCTTTTCGGCTTCTTGGAGCGAGCGAGCGAGCGAGAGAGAGAGAGAGAGACCCACCTCACCTTCTCCTCCTGTCCTCTTCCTCACCCTGGTCCCGCTCAAGCTGAGCCTTTCCCAGTGCAAGATTCAATCTGCTGCTGCTGTTCTTGAGATTTGCCCGGCTCGGATTTCTTGCGTGCAGTTTCTTTGTTGATCTGGTTGGTTCAGATTGATTTGCTGCAAGTGCAAACCTGTTCTTGGGGGGGTTTGATTTGATGTGGTGTGTTCTTGGCTCCGATTCGGCCGCGGCTCCCGGTGAAGAAATCCCCAAGTTTGATGAGGCTCTCGCACTGTGAGAGCTACTGCGGCCCTCCCCTGTGCTACATCCCCTGCCTCCCCAAATCCAAAGATGCAGCCGGCGACGCCGCCCACAAATCCAAGGATGCAGCCGCCGCCGACGCTGTCCCGGTGGCCGCCGCGGAGGACAAGCCGCCGCCGGTTCAGAAGATTGAGGCGGCGGTAGCGGAGAAGGACGGTGACGACAGCAAGGAGGTCGACGGCGACGAGGAGGAGGAGGAGGATGATGATGATGTGAAGACGGCGGTGGCGGTGGCGGCGCCGCCTCCGGCTCCGCTGAAGAGTAA-CCTGAAGAAGG-CCGACTGCGCCGACAGCAAGTGCGCCGAGAAAGGCAATGTGAAGTGGCTGGATTTGCTGGGG-AAGGATCTCACCGAGGTCAAGGAATTCGAGCCAAGTGAATCAGGAGATT-CCATGGATGAAGATGACAT-CGCGG-AATGCGTTTGCGCTATCCAATGAT-CCAG-AAGGGTTTCCT-CCCCAACGTTGCTGTAAATTGTAAAATGGGAGTTTCGCACGTAATCATCGATCTTTCTTTCCTCTCACTGGAGGGT-CAGGTTGTTTTGTTGACCCCCTTCATGAGTTCCACTGAAGCTCCCCAGCATCCGGTGCTCAGTTCCATCAGTACATGCCGCCGCCATAGCTGCCTAGCTGTAGATGTTTCTGCCTTGTGTTGATCAGATTATGTGTTGTTTGGGGTTGGTATTGGTTGCTGAGGAGTGATACATTTTTCACAATGCCTGGTGGTGTAGCCAAGATTATTGCTTCTGTAAAGTTTACAATATAAAGTTATTGAGAGTGGAAACAGATCCTGCCATCCTGTGCCCACTTTGACAAAAAAGC-ATATGTAAAGCTTATTGATTTGAAGCTGTCAACTGAAAAAGTAAGAGAACTTGGTTGGTGTTAGTATCATGGACGCTGAGTTCTGACAAATTGTATGTATTATCATTTTGTTCATTACTTCTCATGATGGTGTCCAAGCAAATAACTCTTCAGTGACCTGAATAACCTCCCCATTTGAGATAAAAAAAAAAAAAAAAAA]

[+] EMBL CF293358             [GTAGAAACATTTCCCCCTTCTTCTCCTCTCGCTTCCTTTTCGGCTTCTTGGAGCGAGCGAGCGAGCGAGAGAGAGAGAGAGAGACCCACCTCACCTTCTCCTCCTGTCCTCTTCCTCACCCTGGTCCCGCTCAAGCTGAGCCTTTCCCAGTGCAAGATTCAATCTGCTGCTGCTGTTCTTGAGATTTGCCTGGCTCGGATTTCTTGCGTGCAGTTTCTTTGTTGATCTGGTTGGTTCAGATTGATTTGCTGCAAGTGCAAACCTGTTCTTGGGGGGGTTTGATTTGATGTGGTGTGTTCTTGGCTCCGATTCGGCCGCGGCTCCCGGTGAAGAAATCCCCAAGTTTGATGAGGCTCTCGCACTGTGAGAGCTACTGCGGCCCTCCCCTGTGCTACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL OSS14747A            [                               CTTCCTTTTCGGCTTCTTGGAGCGAGCGAGCGAGCGAGAGAGAGAGAGAGAGACCCACCTCACCTTCTCCTCCTGTCCTCTTCCTCACCCTGGTCCCGCTCAAGCTGAGCCTTTCCCAGTGCAAGATTCAATCTGCTGCTGCTGTTCTTGAGATTTGCCCGGCTCGGATTTCTTGCGTGCAGTTTCTTTGTTGATCTGGTTGGTTCAGATTGATTTGCTGCAAGTGCAAACCTGTTCTTGGGGGGGTTTGATTTGATGTGGTGTGTTCTNGGCTCCGATTCGGNCGCGGCTCCCGGTGAAGAAAT CCCAAGTTTGATGAGGCTCTCGCACTGTGAGA NTACTGGGGCCCTCCCCTGTGCTACAT CCCTGNCT CCCAAATCCAAAGANG AACCGGCGACG CGGCCANAAAT CAAGGATaa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AK068731             [                                             TCTTGGAGCGAGCGAGCGAGCGAGAGAGAGAGAGAGAGACCCACCTCACCTTCTCCTCCTGTCCTCTTCCTCACCCTGGTCCCGCTCAAGCTGAGCCTTTCCCAGTGCAAGATTCAATCTGCTGCTGCTGTTCTTGAGATTTGCCCGGCTCGGATTTCTTGCGTGCAGTTTCTTTGTTGATCTGGTTGGTTCAGATTGATTTGCTGCAAGTGCAAACCTGTTCTTGGGGGGGTTTGATTTGATGTGGTGTGTTCTTGGCTCCGATTCGGCCGCGGCTCCCGGTGAAGAAATCCCCAAGTTTGATGAGGCTCTCGCACTGTGAGAGCTACTGCGGCCCTCCCCTGTGCTACATCCCCTGCCTCCCCAAATCCAAAGATGCAGCCGGCGACGCCGCCCACAAATCCAAGGATGCAGCCGCCGCCGACGCTGTCCCGGTGGCCGCCGCGGAGGACAAGCCGCCGCCGGTTCAGAAGATTGAGGCGGCGGTAGCGGAGAAGGACGGTGACGACAGCAAGGAGGTCGACGGCGACGAGGAGGAGGAGGAGGATGATGATGATGTGAAGACGGCGGTGGCGGTGGCGGCGCCGCCTCCGGCTCCGCTGAAGAGTAA CCTGAAGAAGG CCGACTGCGCCGACAGCAAGTGCGCCGAGAAAGGCAATGTGAAGTGGCTGGATTTGCTGGGG AAGGATCTCACCGAGGTCAAGGAATTCGAGCCAAGTGAATCAGGAGATT CCATGGATGAAGATGACAT CGCGG AATGCGTTTGCGCTATCCAATGAT CCAG AAGGGTTTCCT CCCCAACGTTGCTGTAAATTGTAAAATGGGAGTTTCGCACGTAATCATCGATCTTTCTTTCCTCTCACTGGAGGGT CAGGTTGTTTTGTTGACCCCCTTCATGAGTTCCACTGAAGCTCCCCAGCATCCGGTGCTCAGTTCCATCAGTACATGCCGCCGCCATAGCTGCCTAGCTGTAGATGTTTCTGCCTTGTGTTGATCAGATTATGTGTTGTTTGGGGTTGGTATTGGTTGCTGAGGAGTGATACATTTTTCACAATGCCTGGTGGTGTAGCCAAGATTATTGCTTCTGTAAAGTTTACAATATAAAGTTATTGAGAGTGGAAACAGATCCTGCCATCCTGTGCCCACTTTGACAAAAAAGC ATATGTAAAGCTTATTGATTTGAAGCTGTCAACTGAAAAAGTAAGAGAACTTGGTTGG                                                                                                                                             ]
[+] EMBL OSR22241A            [                                                          GAGCGAGCGAGAGAGAGAGAGAGAGACCCACCTCACCTTCTCCTCCTGTCCTCTTCCTCACCCTGGTCCCGCTCAAGCTGAGCCTTTCCCAGTGCAAGATTCAATCTGCTGCTGCTGTTCTTGAGATTTGCCCGGCTCGGATTTCTTGCGTGCAGTTTCTTTGTTGATCTGGTTGGTTCAGATTGATTTGCTGCAAGTGCAAACCTGTTCTTGGGGGGGTTTGATTTGATGTGGTGTGTTCTTGGCTCCGATTCGGCCGCGGCTCCCGGTGAAGAAATCCCCAAGTTTGATGAGGCTCTCGCACTGTGAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AU162664             [                                                                             AGAGAGACCCACCTCACCTTCTCCTCCTGTCCTCTTCCTCACCCTGGTCCCGCTCAAGCTGAGCCTTTCCCAGTGCAAGATTCAATCTGCTGCTGCTGTTCTTGAGATTTGCCCGGCTCGGATTTCTTGCGTGCAGTTTCTTTGTTGATCTGGTTGGTTCAGATTGATTTGCTGCAAGTGCAAACCTGTTCTTGGGGGGGTTTGATTTGATGTGGTGTGTTCTTGGCTCCGATTCGGCCGCGGCTCCCGGTGAAGAAATCCCCAAGTTTGATGAGGCTCTCGCACTGTGAGAGCTACTGCGGCCCTCCCCTGTGCTACATCCCCTGCCTCCCCAAATCCAAAGATGCAGCCGGCGACGCCGCCCACAAATCCAAGGATGCAGCCGCCGCCGACGCTGTCCCGGTGGCCGCCGCGGAGGACAAGCCGCCGCCGGTTCAGAAGATTGAGGCGGCGGTAG GGAGAAGGACGGTGACGACAGCAAGGAGGTCGACGGCGACGAGGAGGAGGAGGAGGATGATGATGATGTGAAGACGGCGGTGGCGGTGGCGGCGCCGCCTCCGGCTCCGCTGAAGAGTAA CCTGAAGAAGG CCGACTGCGCCGACAGCAAGTGCGCCGAGAAAGGCAATGTGAAGTGGCTGGATTTGCTGGGG AAGGATCTCACCGAGGTCAAGGAATTCGAGCCAAGTGAATCAGGAGATT Ca                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AU197245             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                nCCGCTGAAGAGTAA CTTGAAGAAGG CCGANTGCGCCGACAGCAAGTNCGCCGAGAAAGGCAATGTGAAGTGGCTGGATTTGCTGGGG AAGGATCTCACCGAGGTCAAGGAATTCGAGCCAAGTGAATCAGGAGATT CCATGGATGAAGATGACAT CGCGG AATGCGTTTGCGCTATCCAATGAT CCAG AAGGGTTTCCT CCCCAACGTTGCTGTAAATTGTAAAATGGGAGTTTCGCACGTAATCATCGATCTTTCTTTCCTCTCACTGGAGGGT CAGGTTGTTTTGTTGACCCCCTTCATGAGTTCCACTGAAGCTCCCCAGCATCCGGTGCTCAGTTCCATCAGTACATGCCGCCGCCATAGCTGCCTAGCTGTAGATGTTTCTGCCTTGTGTTGATCAGATTATGTGTTGTTTGGGGTTGGTATTGGTTGCTGAGGAGTGATACATTTTTCACAATGCCTGGTGGTGTAGCCAAGATTATTGCTTCTGTAAAGTTTACAATATAAAGTTATTGAGAGTGGAAACAGATCCTGCCATCCTGTGCCCACTTTGACAAAAAAGC ATATGTAAAGCTTATTGAaaaa                                                                                                                                                                                 ]
[+] EMBL AU056222             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CTGAAGAGTAACCCTGAAGAAGGCCCGACTGCGCCGACAGCAAGTGCGCCGAGAAAGGCAATGTGAAGTGGCTGGATTTGCTGGGG AAGGATCTCACCGAGGTCAAGGAATTCGAGCCAAGTGAATCAGGAGATT CCATGGATGAAGATGACAT CGCGG AATGCGTTTGCGCTATCCAATGAT CCAG AAGGGTTTCCT CCCCAACGTTGCTGTAAATTGTAAAATGGGAGTTTCGCACGTAATCATCGATCTTTCTTTCCTCTCACTGGAGGGTCCAGGTTGTTTTGTTGACCCCCTTCATGAGTTCCACTGAAGCTCCCCAGCATCCGGTGCTCAGTTCCATCAGTACATGCCGCCGCCATAGCTGCCTAGCTGTAGATGTTTCTGCCTTGTGTTGATCAGATTATGTGTTGTTTGGGGTTGGTATTGGTTGCTGAGGAGTGATACATTTTTCACAATGCCTGGTGGTGTAGCCAAGATTATTGCTTCTGTAAAGTTTACAATATAAAGTTATTGAGAGTGGAAACAGATCCTGCCATCCTGTGCCCACTTTGACAAAAAAGC ATATGTAAAGCTTATTGATTTGAAGCTGTCAACTGAAAAAGTAAGAGAACTTGGTTGGTGTTAaaaaaa                                                                                                                                  ]
[-] EMBL CF293357             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CTGAAGAAGG CCGACTGCGCCGACAGCAAGTGCGCCGAGAAAGGCAATGTGAAGTGGCTGGATTTGCTGGGG AAGGATCTCACCGAGGTCAAGGAATTCGAGCCAAGTGAATCAGGAGATT CCATGGATGAAGATGACAC CGCGGAAATGCGTTTGCGCTATCCAATGAT CCAG AAGGGTTTCCT CCCCAACGTTGCTGTAAATTGTAAAATGGGAGTTTCGCACGTAATCATCGATCTTTCTTTCCTCTCACTGGAGGGT CAGGTTGTTTTGTTGACCCCCTTCATGAGTTCCACTGAAGCTCCCCAGCATCCGGTGCTCAGTTCCATCAGTACATGCCGCCGCCATAGCTGCCTAGCTGTAGATGTTTCTGCCTTGTGTTGATCAGATTATGTGTTGTTTGGGGTTGGTATTGGTTGCTGAGGAGTGATACATTTTTCACAATGCCTGGTGGTGTAGCCAAGATTATTGCTTCTGTAAAGTTTACAATATAAAGTTATTGAGAGTGGAAACAGATCCTGCCATCCTGTGCCCACTTTGACAAAAA                                                                                                                                                                                                           ]
[+] EMBL AU089752             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GATTTGCTGGGGNAAGGATCTCACCGAGGTCAAGGAATTCGAGCCAAGTGAATCAGGAGATTCCCATGGATGAAGATGACAT CGCGG AATGCGTTTGCGCTATCCAATGAT CCAGAAAGGGTTTCCT CCCCAACGTTGCTGTAAATTGTAAAATGGGAGTTTCGCACGTAATCATCGATCTTTCTTTCCTCTCACTGGAGGGT CAGGTTGTTTTGTTGACCCCCTTCATGAGTTCCACTGAAGCTCCCCAGCATCCGGTGCTCAGTTCCATCAGTACATGCCGCCGCCATAGCTGCCTAGCTGTAGATGTTTCTGCCTTGTGTTGATCAGATTATGTGTTGTTTGGGGTTGGTATTGGTTGCTGAGGAGTGATACATTTTTCACAATGCCTGGTGGTGTAGCCAAGATTATTGCTTCTGTAAAGTTTACAATATAAAGTTATTGAGAGTGGAAACAGATCCTGCCATCCTGTGCCCACTTTGACAAAAAAGC ATATGTAAAGCTTATTGATTTGAAGCTGTCAACTGAAAAAGTAAGAGAACTTGGTTGGTGTTAGTATCATGGACGCTGAGTTCTGACAAATTGTATGTATTATCATTTTGTTCATTACTTCTCATGATGGTGTCCAAGCAAATAACTCTTCAGTGACCTGAATAACCTCCCCATTTGAGATAAAAAAAAAAAAAAAAAA]
[-] EMBL CF327982             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         G AAGGATCTCACCGAGGTCAAGGAATTCGAGCCAAGTGAATCAGGAGATT CCATGGATGAAGATGACAT CGCGG AATGCGTTTGCGCTATCCAATGAT CCAG AAGGGTTTCCT CCCCAACGTTGCTGTAAATTGTAAAATGGGAGTTTCGCACGTAATCATCGATCTTTCTTTCCTCTCACTGGAGGGT CAGGTTGTTTTGTTGACCCCCTTCATGAGTTCCACTGAAGCTCCCCAGCATCCGGTGCTCAGTTCCATCAGTACATGCCGCCGCCATAGCTGCCTAGCTGTAGATGTTTCTGCCTTGTGTTGATCAGATTATGTGTTGTTTGGGGTTGGTAATGGTTGCTGAGGAGTGATACATTTTTCACAATGCCTGGTGGTGTAGCCAAGATTATTGCTTCTGTAAAGTTTACAATATAAAGTTATTGAGAGTGGAAACAGATCCTGCCATCCTGTGCCCACTTTGACAAAAAAGCNATATGTAAAGCTTATTGATTTGAAGCTGTCAAa                                                                                                                                                                      ]
[+] EMBL CA756547             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GGAATTCGAGCCAAGTGAATCAGGAGATT CCATGGATGAAGATGACAT CGCGG AATGCGTTTGCGCTATCCAATGAT CCAG AAGGGTTTCCT CCCCAACGTTGCTGTAAATTGTAAAATGGGAGTTTCGCACGTAATCATCGATCTTTCTTTCCTCTCACTGGAGGGC CAGGTTGTTTTGTTGACCCCCTTCATGAGTTCCACTGAAGCTCCCCAGCATCCGGTGCTCAGTTCCATCAGTACATGCCGCCGCCATAGTTGCCTAGCTGTAGATGTTTCAGCCTTGTGTTGATCAGATTATGTGTTGTTTGGGGTTGGTATTGGTTGCTGAGGAGTGATACATTTTTCACAATGCCTGGTGGTGTAGCCAAGATTATTGCTTCTGTAAAGTTTACAATATAAAGTTATTGAGAGTGGAAACAGATCCTGCCATCCTGTGCTCACTTTGACAAAAAAGC ATATGTAAAGCTTATTGATTTGAAGCTGTCAACTGAAAAAGTAAGAGAACTTGGTTGGTGTTAGTATCATGGACGCTGAGTTCTGACAAATTGTATGTATTATCATTTTGTTCATTACTTCTCATG                                                                         ]
[-] EMBL BI306110             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GAGATT CCATGGATGAAGATGACAT CGCGG AATGCGTTTGCGCTATCCAATGAT CCAG AAGGGTTTCCT CCCCAACGTTGCTGTAAATTGTAAAATGGGAGTTTCGCACGTAATCATCGATCTTTCTTTCCTCTCACTGGAGGGC CAGGTTGTTTTGTTGACCCCCTTCATGAGTTCCACTGAAGCTCCCCAGCATCCGGTGTTCAGTTCCATCAGTACATGCCGCCGCCATAGTTGCCTAGCTGTAGATGTTTCAGCCTTGTGTTGATCAGATTATGTGTTGTTTGGGGTTGGTATTGGTTGCTGAGGAGTGATACATTTTTCACAATGCCTGGTGGTGTAGCCAAGATTATTGCTTCTGTAAAGTTTACAATATAAAGTTATTGAGAGTGGAAACAGATCCTGCCATCCTGTGCTCACTTTGACAAAAAAGC ATATGTAAAGCTTATTGATTTGAAGCTGTCAACTGAAAAAGTAAAAGAACTTGGTT                                                                                                                                               ]
[+] EMBL AU162424             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           T CCATGGATGAAGATGACATCCGCGG AATGCGTTTGCGCTATCCAATGATCCCAG AAGGGTTTCCTCCCCCAACGTTGCTGTAAATTGTAAAATGGGAGTTTCGCACGTAATCATCGATCTTTCTTTCCTCTCACTGGAGGGT CAGGTTGTTTTGTTGACCCCCTTCATGAGTTCCACTGAAGCTCCCCAGCATCCGGTGCTCAGTTCCATCAGTACATGCCGCCGCCATAGCTGCCTAGCTGTAGATGTTTCTGCCTTGTGTTGATCAGATTATGTGTTGTTTGGGGTTGGTATTGGTTGCTGAGGAGTGATACATTTTTCACAATGCCTGGTGGTGTAGCCAAGATTATTGCTTCTGTAAAGTTTACAATATAAAGTTATTGAGAGTGGAAACAGATCCTGCCATCCTGTGCCCACTTTGACAAAAAA                                                                                                                                                                                                          ]


>consensus_14006#0 GTAGAAACATTTCCCCCTTCTTCTCCTCTCGCTTCCTTTTCGGCTTCTTGGAGCGAGCGA GCGAGCGAGAGAGAGAGAGAGAGACCCACCTCACCTTCTCCTCCTGTCCTCTTCCTCACC CTGGTCCCGCTCAAGCTGAGCCTTTCCCAGTGCAAGATTCAATCTGCTGCTGCTGTTCTT GAGATTTGCCCGGCTCGGATTTCTTGCGTGCAGTTTCTTTGTTGATCTGGTTGGTTCAGA TTGATTTGCTGCAAGTGCAAACCTGTTCTTGGGGGGGTTTGATTTGATGTGGTGTGTTCT TGGCTCCGATTCGGCCGCGGCTCCCGGTGAAGAAATCCCCAAGTTTGATGAGGCTCTCGC ACTGTGAGAGCTACTGCGGCCCTCCCCTGTGCTACATCCCCTGCCTCCCCAAATCCAAAG ATGCAGCCGGCGACGCCGCCCACAAATCCAAGGATGCAGCCGCCGCCGACGCTGTCCCGG TGGCCGCCGCGGAGGACAAGCCGCCGCCGGTTCAGAAGATTGAGGCGGCGGTAGCGGAGA AGGACGGTGACGACAGCAAGGAGGTCGACGGCGACGAGGAGGAGGAGGAGGATGATGATG ATGTGAAGACGGCGGTGGCGGTGGCGGCGCCGCCTCCGGCTCCGCTGAAGAGTAACCTGA AGAAGGCCGACTGCGCCGACAGCAAGTGCGCCGAGAAAGGCAATGTGAAGTGGCTGGATT TGCTGGGGAAGGATCTCACCGAGGTCAAGGAATTCGAGCCAAGTGAATCAGGAGATTCCA TGGATGAAGATGACATCGCGGAATGCGTTTGCGCTATCCAATGATCCAGAAGGGTTTCCT CCCCAACGTTGCTGTAAATTGTAAAATGGGAGTTTCGCACGTAATCATCGATCTTTCTTT CCTCTCACTGGAGGGTCAGGTTGTTTTGTTGACCCCCTTCATGAGTTCCACTGAAGCTCC CCAGCATCCGGTGCTCAGTTCCATCAGTACATGCCGCCGCCATAGCTGCCTAGCTGTAGA TGTTTCTGCCTTGTGTTGATCAGATTATGTGTTGTTTGGGGTTGGTATTGGTTGCTGAGG AGTGATACATTTTTCACAATGCCTGGTGGTGTAGCCAAGATTATTGCTTCTGTAAAGTTT ACAATATAAAGTTATTGAGAGTGGAAACAGATCCTGCCATCCTGTGCCCACTTTGACAAA AAAGCATATGTAAAGCTTATTGATTTGAAGCTGTCAACTGAAAAAGTAAGAGAACTTGGT TGGTGTTAGTATCATGGACGCTGAGTTCTGACAAATTGTATGTATTATCATTTTGTTCAT TACTTCTCATGATGGTGTCCAAGCAAATAACTCTTCAGTGACCTGAATAACCTCCCCATT TGAGATAAAAAAAAAAAAAAAAAA



consensusID : consensus_14006#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 564
fasta sequence
                              [TGGACTGAAGGAGTAGAAAGAGCGAGCGAGCGAGCGAGAGAGAGAGAGAGAGACCCACCTCACTTTCTCCTCCTGTCCTCTTCCTCACCCTGGTCCCGCTCAAGCTGAGCCTTTCCCAGTGCAAGATTCAATCTGCTGCTGCTGTTCTTGAGATTTGCCCGGCTCGGATTTCTTGCGTGCAGTTTCTTTGTTGATCTGGTTGGTTCAGATTGATTTGCTGCAAGTGCAAACCTGTTCTTGGGGGGGTTTGATTGATGTGGTGTGTTCTTGGCTCCGATTCGGCCGCGGCTCCCGGTGAAGAAATCCCCAAGTTTGATGAGGCTCTCGCACTGTGAGAGCTACTGCGGCCCTCCCCTGTGCTACATCCCCTGCCTCCCCAAATCCAAAGATGCAGCCGGCGACGCCGCCCACAAATCCAAGGATGCAGCCGCCGCCGACGCTGTCCCGGTGGCCGCCGCGGAGGACAAGCCGCCGCCGGTTCAGAAGATTGAGGCGGCGGTAGCGGAGAAGGACGGTGACGACAGCAAGGAGGTCGACGGCGACGAGGAGGAGGAGGAGGATGAT]

[+] EMBL CF327981             [TGGACTGAAGGAGTAGAAAGAGCGAGCGAGCGAGCGAGAGAGAGAGAGAGAGACCCACCTCACTTTCTCCTCCTGTCCTCTTCCTCACCCTGGTCCCGCTCAAGCTGAGCCTTTCCCAGTGCAAGATTCAATCTGCTGCTGCTGTTCTTGAGATTTGCCCGGCTCGGATTTCTTGCGTGCAGTTTCTTTGTTGATCTGGTTGGTTCAGATTGATTTGCTGCAAGTGCAAACCTGTTCTTGGGGGGGTTTGATTGATGTGGTGTGTTCTTGGCTCCGATTCGGCCGCGGCTCCCGGTGAAGAAATCCCCAAGTTTGATGAGGCTCTCGCACTGTGAGAGCTACTGCGGCCCTCCCCTGTGCTACATCCCCTGCCTCCCCAAATCCAAAGATGCAGCCGGCGACGCCGCCCACAAATCCAAGGATGCAGCCGCCGCCGACGCTGTCCCGGTGGCCGCCGCGGAGGACAAGCCGCCGCCGGTTCAGAAGATTGAGGCGGCGGTAGCGGAGAAGGACGGTGACGACAGCAAGGAGGTCGACGGCGACGAGGAGGAGGAGGAGGATGAT]


>consensus_14006#1 TGGACTGAAGGAGTAGAAAGAGCGAGCGAGCGAGCGAGAGAGAGAGAGAGAGACCCACCT CACTTTCTCCTCCTGTCCTCTTCCTCACCCTGGTCCCGCTCAAGCTGAGCCTTTCCCAGT GCAAGATTCAATCTGCTGCTGCTGTTCTTGAGATTTGCCCGGCTCGGATTTCTTGCGTGC AGTTTCTTTGTTGATCTGGTTGGTTCAGATTGATTTGCTGCAAGTGCAAACCTGTTCTTG GGGGGGTTTGATTGATGTGGTGTGTTCTTGGCTCCGATTCGGCCGCGGCTCCCGGTGAAG AAATCCCCAAGTTTGATGAGGCTCTCGCACTGTGAGAGCTACTGCGGCCCTCCCCTGTGC TACATCCCCTGCCTCCCCAAATCCAAAGATGCAGCCGGCGACGCCGCCCACAAATCCAAG GATGCAGCCGCCGCCGACGCTGTCCCGGTGGCCGCCGCGGAGGACAAGCCGCCGCCGGTT CAGAAGATTGAGGCGGCGGTAGCGGAGAAGGACGGTGACGACAGCAAGGAGGTCGACGGC GACGAGGAGGAGGAGGAGGATGAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14006#0      GTAGAAACATTTCCCCCTTCTTCTCCTCTCGCTTCCTTTTCGGCTTCTTGGAGCGAGCGA 60
consensus_14006#1      -------------------------------TGGACTGAAGGAGTAGAAAGAGCGAGCGA 29
                                                          **    *  *     **********

consensus_14006#0      GCGAGCGAGAGAGAGAGAGAGAGACCCACCTCACCTTCTCCTCCTGTCCTCTTCCTCACC 120
consensus_14006#1      GCGAGCGAGAGAGAGAGAGAGAGACCCACCTCACTTTCTCCTCCTGTCCTCTTCCTCACC 89
                       ********************************** *************************

consensus_14006#0      CTGGTCCCGCTCAAGCTGAGCCTTTCCCAGTGCAAGATTCAATCTGCTGCTGCTGTTCTT 180
consensus_14006#1      CTGGTCCCGCTCAAGCTGAGCCTTTCCCAGTGCAAGATTCAATCTGCTGCTGCTGTTCTT 149
                       ************************************************************

consensus_14006#0      GAGATTTGCCCGGCTCGGATTTCTTGCGTGCAGTTTCTTTGTTGATCTGGTTGGTTCAGA 240
consensus_14006#1      GAGATTTGCCCGGCTCGGATTTCTTGCGTGCAGTTTCTTTGTTGATCTGGTTGGTTCAGA 209
                       ************************************************************

consensus_14006#0      TTGATTTGCTGCAAGTGCAAACCTGTTCTTGGGGGGGTTTGATTTGATGTGGTGTGTTCT 300
consensus_14006#1      TTGATTTGCTGCAAGTGCAAACCTGTTCTTGGGGGGGTTTGATT-GATGTGGTGTGTTCT 268
                       ******************************************** ***************

consensus_14006#0      TGGCTCCGATTCGGCCGCGGCTCCCGGTGAAGAAATCCCCAAGTTTGATGAGGCTCTCGC 360
consensus_14006#1      TGGCTCCGATTCGGCCGCGGCTCCCGGTGAAGAAATCCCCAAGTTTGATGAGGCTCTCGC 328
                       ************************************************************

consensus_14006#0      ACTGTGAGAGCTACTGCGGCCCTCCCCTGTGCTACATCCCCTGCCTCCCCAAATCCAAAG 420
consensus_14006#1      ACTGTGAGAGCTACTGCGGCCCTCCCCTGTGCTACATCCCCTGCCTCCCCAAATCCAAAG 388
                       ************************************************************

consensus_14006#0      ATGCAGCCGGCGACGCCGCCCACAAATCCAAGGATGCAGCCGCCGCCGACGCTGTCCCGG 480
consensus_14006#1      ATGCAGCCGGCGACGCCGCCCACAAATCCAAGGATGCAGCCGCCGCCGACGCTGTCCCGG 448
                       ************************************************************

consensus_14006#0      TGGCCGCCGCGGAGGACAAGCCGCCGCCGGTTCAGAAGATTGAGGCGGCGGTAGCGGAGA 540
consensus_14006#1      TGGCCGCCGCGGAGGACAAGCCGCCGCCGGTTCAGAAGATTGAGGCGGCGGTAGCGGAGA 508
                       ************************************************************

consensus_14006#0      AGGACGGTGACGACAGCAAGGAGGTCGACGGCGACGAGGAGGAGGAGGAGGATGATGATG 600
consensus_14006#1      AGGACGGTGACGACAGCAAGGAGGTCGACGGCGACGAGGAGGAGGAGGAGGATGAT---- 564
                       ********************************************************    

consensus_14006#0      ATGTGAAGACGGCGGTGGCGGTGGCGGCGCCGCCTCCGGCTCCGCTGAAGAGTAACCTGA 660
consensus_14006#1      ------------------------------------------------------------
                                                                                   

consensus_14006#0      AGAAGGCCGACTGCGCCGACAGCAAGTGCGCCGAGAAAGGCAATGTGAAGTGGCTGGATT 720
consensus_14006#1      ------------------------------------------------------------
                                                                                   

consensus_14006#0      TGCTGGGGAAGGATCTCACCGAGGTCAAGGAATTCGAGCCAAGTGAATCAGGAGATTCCA 780
consensus_14006#1      ------------------------------------------------------------
                                                                                   

consensus_14006#0      TGGATGAAGATGACATCGCGGAATGCGTTTGCGCTATCCAATGATCCAGAAGGGTTTCCT 840
consensus_14006#1      ------------------------------------------------------------
                                                                                   

consensus_14006#0      CCCCAACGTTGCTGTAAATTGTAAAATGGGAGTTTCGCACGTAATCATCGATCTTTCTTT 900
consensus_14006#1      ------------------------------------------------------------
                                                                                   

consensus_14006#0      CCTCTCACTGGAGGGTCAGGTTGTTTTGTTGACCCCCTTCATGAGTTCCACTGAAGCTCC 960
consensus_14006#1      ------------------------------------------------------------
                                                                                   

consensus_14006#0      CCAGCATCCGGTGCTCAGTTCCATCAGTACATGCCGCCGCCATAGCTGCCTAGCTGTAGA 1020
consensus_14006#1      ------------------------------------------------------------
                                                                                   

consensus_14006#0      TGTTTCTGCCTTGTGTTGATCAGATTATGTGTTGTTTGGGGTTGGTATTGGTTGCTGAGG 1080
consensus_14006#1      ------------------------------------------------------------
                                                                                   

consensus_14006#0      AGTGATACATTTTTCACAATGCCTGGTGGTGTAGCCAAGATTATTGCTTCTGTAAAGTTT 1140
consensus_14006#1      ------------------------------------------------------------
                                                                                   

consensus_14006#0      ACAATATAAAGTTATTGAGAGTGGAAACAGATCCTGCCATCCTGTGCCCACTTTGACAAA 1200
consensus_14006#1      ------------------------------------------------------------
                                                                                   

consensus_14006#0      AAAGCATATGTAAAGCTTATTGATTTGAAGCTGTCAACTGAAAAAGTAAGAGAACTTGGT 1260
consensus_14006#1      ------------------------------------------------------------
                                                                                   

consensus_14006#0      TGGTGTTAGTATCATGGACGCTGAGTTCTGACAAATTGTATGTATTATCATTTTGTTCAT 1320
consensus_14006#1      ------------------------------------------------------------
                                                                                   

consensus_14006#0      TACTTCTCATGATGGTGTCCAAGCAAATAACTCTTCAGTGACCTGAATAACCTCCCCATT 1380
consensus_14006#1      ------------------------------------------------------------
                                                                                   

consensus_14006#0      TGAGATAAAAAAAAAAAAAAAAAA 1404
consensus_14006#1      ------------------------
                                               




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)