These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14020#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1844 fasta sequence [CGGCGGCTGTCAACGGGGACCGGCTCAGGGCGGAGCAGATCCGGAAGCAGGCGAAGGACGCGGCGGCCTCCGCCGCCGCGCTGGCCGCGGCGTCGCGCAGGCTCCACCTCGACCGCGCGCGCCACCTCCGGCTGCTCTCCTCCCTCCACCGCAACCTCACCGCCACGCTCCGTGACCTCAGCGCCGCCGCGTCGGCGTCGGCGTCCGCGTCCGCGTCCGAGGCCGGCTACGCGTCGGCGGGGGACGAGGTGCGGCGGCTCGACCTTCAGGCCAAGGACCTGATCCGCGCCGCGCGCGCCGCCATCGCGGACGCCAAGCCGCTGTTCGACCCGCAGCTCAAGATCCAGCGGCTCAAGGACGCCATCTTCGCGCAGAACGAGTTGCTCGCGCGCGCCAAGAAGCGCGGCGCCTTCGCCTCCCTCATCGCCGCCAAGTCCATCCCCAAGCCGCTCCACTGCCTCGCCGTCCGCCTCACCGCCGAGCGGATCGCACGGCCCGAGAATTACGCCGACCCGGTGCCGCCGCCGCACGCGCTCGAGGACCCCGCCATGTTCCACTACGCCATCTTCTCCGACAACGTCCTCGCCGCCTCCGTCGTCGTGCGCTCCGCCGTCGCCAACTCGCTCGACCCCTCCAAGCACGTCTTCCACGTCGTCACCGACCGAATGAACCTTGGCGCCATGCAGGTGATAATTCGCCTAATGGACTTAAAAGGCGCGCACTATGAGGTCAAAGCATTTGAAGACTACAAGTTTCTTAACTCCTCATATGTTCCTGTGCTTCGGCAACTGGAGTCAGCAAACCTCCAGAAGTTCTATTTTGAGAACAAGCTTGAGAATGCTACAAAAGATGCTAGTAATATGAAGTTTAGGAACCCCAAGTATCTCTCGATGCTCAATCACTTGCGGTTCTATTTGCCGGAGATGTACCCAAAGCTGCACCGGATACTTTTCTTGGATGATGATGTTGTGGTACAGCGGGATCTTACAGGATTGT-GGAAGATTGACAT-GGATGGGAAGGTGAATGGAGCAGTGGAAACATGCTTTGGAT-CGTTTCATCGGTATTGGCAGTATATGAACTTCTCGCACCCACTTATCAAAGAGAAGTTTAATCCTAATGCATGTGGATGGGCATATGGCATGAACTTCTTTGATCTTGATTCTTGGAGGAGAGAAAAGAGTACTGAGCAATATCATTACTGGCAGAGTCAGAATGAGAACAGGACATTATGGAAGCTAGGAACGTTGCCTCCTGGTTTGATCACATTCTACTCCACCACAAAGCCTCTGGAAAAATCTTGGCATGTTCTTGGACTCGGGTACAATCCAAGCATAAGCATGGAGGAGATTAGAAACGCTGCTGTTGTGCATTTCAACGGGAACATGAAGCCCTGGCTGGATATCGGTATGAACCAGTTCAGGCACCTATGGACAAAATACGTGGATTACGACGACTCATTCATTCGCCAATGCAATTTTGCACCACCGTAGAAGGAAAAGCCTTTGCCATTGTTCTACAGATATCAAGGAAGATTGGTAACTAGAGCTAGAGCCAC-TGTAACAGTTAACACATGTACTATCGCATG-TTTTGT-GGAAATCTCAGGAGCCTGCGAATTAGAACTGC-GGAGGACAAGAAATTCTTTCTAGATCTTGTTGTATGTCATCGATTAAGTTATGGTGAAAATGCTGTTCAAAACATGAACATTATTTTCATCCCGTTTGTAATAATCTTATGCGTGTCAGCGTGTGTATGCCAAAGTCATGTGCTATGTTCATAATATGAAGACAATCTTACTAGGACAAATTATCAGAAGATCAATGAACTCCTGTAGAGAAATATTGNGC] [+] EMBL AK069572 [CGGCGGCTGTCAACGGGGACCGGCTCAGGGCGGAGCAGATCCGGAAGCAGGCGAAGGACGCGGCGGCCTCCGCCGCCGCGCTGGCCGCGGCGTCGAGCAGGCTCCACCTCGACCGCGCGCGCCACCTCCGGCTGCTCTCCTCCCTCCACCGCAACCTCACCGCCACGCTCCGTGACCTCAGCGCCGCCGCGTCGGCGTCGGCGTCCGCGTCCGCGTCCGAGGCCGGCTACGCGTCGGCGGGGGACGAGGTGCGGCGGCTCGACCTTCAGGCCAAGGACCTGATCCGCGCCGCGCGCGCCGCCATCGCGGACGCCAAGCCGCTGTTCGACCCGCAGCTCAAGATCCAGCGGCTCAAGGACGCCATCTTCGCGCAGAACGAGTTGCTCGCGCGCGCCAAGAAGCGCGGCGCCTTCGCCTCCCTCATCGCCGCCAAGTCCATCCCCAAGCCGCTCCACTGCCTCGCCGTCCGCCTCACCGCCGAGCGGATCGCACGGCCCGAGAATTACGCCGACCCGGTGCCGCCGCCGCACGCGCTCGAGGACCCCGCCATGTTCCACTACGCCATCTTCTCCGACAACGTCCTCGCCGCCTCCGTCGTCGTGCGCTCCGCCGTCGCGAACTCGCTCGACCCCTCCAAGCACGTCTTCCACGTCGTCACCGACCGAATGAACCTTGGCGCCATGCAGGTGATAATTCGCCTAATGGACTTAAAAGGCGCGCACTATGAGGTCAAAGCATTTGAAGACTACAAGTTTCTTAACTCCTCATATGTTCCTGTGCTTCGGCAACTGGAGTCAGCAAACCTCCAGAAGTTCTATTTTGAGAACAAGCTTGAGAATGCTACAAAAGATGCTAGTAATATGAAGTTTAGGAACCCCAAGTATCTCTCGATGCTCAATCACTTGCGGTTCTATTTGCCGGAGATGTACCCAAAGCTGCACCGGATACTTTTCTTGGATGATGATGTTGTGGTACAGCGGGATCTTACAGGATTGT GGAAGATTGACAT GGATGGGAAGGTGAATGGAGCAGTGGAAACATGCTTTGGAT CGTTTCATCGGTATTGGCAGTATATGAACTTCTCGCACCCACTTATCAAAGAGAAGTTTAATCCTAATGCATGTGGATGGGCATATGGCATGAACTTCTTTGATCTTGATTCTTGGAGGAGAGAAAAGAGTACTGAGCAATATCATTACTGGCAGAGTCAGAATGAGAACAGGACATTATGGAAGCTAGGAACGTTGCCTCCTGGTTTGATCACATTCTACTCCACCACAAAGCCTCTGGAAAAATCTTGGCATGTTCTTGGACTCGGGTACAATCCAAGCATAAGCATGGAGGAGATTAGAAACGCTGCTGTTGTGCATTTCAACGGGAACATGAAGCCCTGGCTGGATATCGGTATGAACCAGTTCAGGCACCTATGGACAAAATACGTGGATTACGACGACTCATTCATTCGCCAATGCAATTTTGCACCACCGTAGAAGGAAAAGCCTTTGCCATTGTTCTACAGATATCAAGGAAGATTGGTAACTAGAGCTAGAGCCAC TGTAACAGTTAACACATGTACTATCGCATG TTTTGT GGAAATCTCAGGAGCCTGCGAATTAGAACTGC GGAGGACAAGAAATTCTTTCTAGATCTTGTTGTATGTCATCGATTAAGTTATGGTGAAAATGCTGTTCAAAACATGAACATTATTTTCATCCCGTTTGTAATAATCTTATGCGTGTCAGCGTGTGTATGCCAAAGTCATGTGCTATGTTCATAATATGAAGACAATCTTACTAGGACAAATTATCAGAAGATCAATGAACTCCTGTAGAGA ] [+] EMBL AK102664 [CGGCGGCTGTCAACGGGGACCGGCTCAGGGCGGAGCAGATCCGGAAGCAGGCGAAGGACGCGGCGGCCTCCGCCGCCGCGCTGGCCGCGGCGTCGCGCAGGCTCCACCTCGACCGCGCGCGCCACCTCCGGCTGCTCTCCTCCCTCCACCGCAACCTCACCGCCACGCTCCGTGACCTCAGCGCCGCCGCGTCGGCGTCGGCGTCCGCGTCCGCGTCCGAGGCCGGCTACGCGTCGGCGGGGGACGAGGTGCGGCGGCTCGACCTTCAGGCCAAGGACCTGATCCGCGCCGCGCGCGCCGCCATCGCGGACGCCAAGCCGCTGTTCGACCCGCAGCTCAAGATCCAGCGGCTCAAGGACGCCATCTTCGCGCAGAACGAGTTGCTCGCGCGCGCCAAGAAGCGCGGCGCCTTCGCCTCCCTCATCGCCGCCAAGTCCATCCCCAAGCCGCTCCACTGCCTCGCCGTCCGCCTCACCGCCGAGCGGATCGCACGGCCCGAGAATTACGCCGACCCGGTGCCGCCGCCGCACGCGCTCGAGGACCCCGCCATGTTCCACTACGCCATCTTCTCCGACAACGTCCTCGCCGCCTCCGTCGTCGTGCGCTCCGCCGTCGCCAACTCGCTCGACCCCTCCAAGCACGTCTTCCACGTCGTCACCGACCGAATGAACCTTGGCGCCATGCAGGTGATAATTCGCCTAATGGACTTAAAAGGCGCGCACTATGAGGTCAAAGCATTTGAAGACTACAAGTTTCTTGACTCCTCATATGTTCCTGTGCTTCGGCAACTGGAGTCAGCAAACCTCCAGAAGTTCTATTTTGAGAACAAGCTTGAGAATGCTACAAAAGATGCTAGTAATATGAAGTTTAGGAACCCCAAGTATCTCTCGATGCTCAATCACTTGCGGTTCTATTTGCCGGAGATGTACCCAAAGCTGCACCGGATACTTTTCTTGGATGATGATGTTGTGGTACAGCGGGATCTTACAGGATTGT GGAAGATTGACAT GGATGGGAAGGTGAATGGAGCAGTGGAAACATGCTTTGGAT CGTTTCATCGGTATTGGCAGTATATGAACTTCTCGCACCCACTTATCAAAGAGAAGTTTAATCCTAATGCATGTGGATGGGCATATGGCATGAACTTCTTTGATCTTGATTCTTGGAGGAGAGAAAAGAGTACTGAGCAATATCATTACTGGCAGAGTCAGAATGAGAACAGGACATTATGGAAGCTAGGAACGTTGCCTCCTGGTTTGATCACATTCTACTCCACCACAAAGCCTCTGGAAAAATCTTGGCATGTTCTTGGACTCGGGTACAATCCAAGCATAAGCATGGAGGAGATTAGAAACGCTGCTGTTGTGCATTTCAACGGGAACATGAAGCCCTGGCTGGATATCGGTATGAACCAGTTCAGGCACCTATGGACAAAATACGTGGATTACGACGACTCATTCATTCGCCAATGCAATTTTGCACCACCGTAGAAGGAAAAGCCTTTGCCATTGTTCTACAGATATCAAGGAAGATTGGTAACTGGAGCTAGAGCCAC TGTAACAGTTAACACATGTACTATCGCATG TTTTGT GGAAATCTCAGGAGCCTGCGAATTAGAACTGC GGAGGACAAGAAATTCTTTCTAGATCTTGTTGTATGTCATCGATTAAGTTATGGTGAAAATGCTGTTCAAAACATGAACATTATTTTCATCCCGTTTGTAATAATCTTATGCGTGTCAGCGTGTGTATGCCAAAGTCATGTGCTATGTTCATAATATGAAGACAATCTTACTAGGACAAATTATCAGAAGATCAATGAACTCCTGTAGA ] [+] EMBL CB618406 [ GCGGCCGTCAACGGGGACCGGCTCAGGGCGGAGCAGATCCGGAAGCAGGCGAAGGACGCGGCGGCCTCCGCCGCCGCGCTGGCCGCGGCGTCGCGCAGGCTCCACCTCGACCGCGCGCGCCACCTCCGGCTGCTCTCCTCCCTCCACCGCAACCTCACCGCCACGCTCCGTGACCTCAGCGCCGCCGCGTCGGCGTCGGCGTCCGCGTCCGCGTCCGAGGCCGGCTACGCGTCGGCGGGGGACGAGGTGCGGCGGCTCGACCTGCAGGCCAAGGACCTGATCCGCGCCGCGCGCGCCGCCATCGCGGACGCCAAGCCGCTGTTCGACCCGCAGCTCAAGATCCAGCGGCTCAAGGACGCCATCTTCGCGCAGAACGAGTTGCTCGCGCGCGCCAAGAAGCGCGGCGCCTTCGCCTCCCTCATCGCCGCCAAGTCCATCCCCAAGCCGCTCCACTGCCTCGCCGTCCGCCTCACCGCCGAGCGGATCGCACGGCCCGAGAATTACGCCGACCCGGTGCCGCCGCCGCACGCGCTCGAGGACCCCGCCATGTTCCACTACGCCATCTTCTCCGACAACGTCCTCGCCGCCTCCGTCGTCGTGCGCTCCGCCGTCGCCAACTCGCTCGACCCCTCCAAGCACGTCTTCCACGTCGTCACCGACCGAATGAACCTTGGCGCCATGCAGGTGATAATTCGCCTAATGGACTTAAAAGGCGCGCACTATGAGGTCAAAGCATTTGAAGACTACAAGTTTCTTAACTCCTCATATGTTCCTGTGCct ] [+] EMBL CB643030 [ CGACCTTCTGGCCAAGGACCTGATCCGCGCCGCGCGCGCCGCCATCGCGGACGCCAAGCCGCTGTTCGACCCGCAGCTCAAGATCCAGCGGCTCAAGGACGCCATCTTCGCGCAGAACGAGTTGCTCGCGCGCGCCAAGAAGCGCGGCGCCTTCGCCTCCCTCATCGCCGCCAAGTCCATCCCCAAGCCGCTCCACTGCCTCGCCGTCCGCCTCACCGCCGAGCGGATCGCACGGCCCGAGAATTACGCCGACCCGGTGCCGCCGCCGCACGCGCTCGAGGACCCCGCCATGTTCCACTACGCCATCTTCTCCGACAACGTCCTCGCCGCCTCCGTCGTCGTGCGCTCCGCCGTCGCCAACTCGCTCGACCCCTCCAAGCACGTCTTCCACGTCGTCACCGACCGAATGAACCTTGGCGCCATGCAGGTGATAATTCGCCTAATGGACTTAAAAGGCGCGCACTATGAGGTCAAAGCATTTGAAGACTACAAGTTTCTTAACTCCTCATATGTTCCTGTGCTTCGGCAACTGGAGTCAGCAAACCTCCAGAAGTTCTATTTTGAGAACAAGCTTGAGAATGCTACAAAAGATGCTAGTAATATGAAGTTTAGGAACCCCAAGTATCTCTCGATGCTCAATCACTTGCGGTTCTATTTGCCGGAGATGTACCCAAAGCTGCACCGGATACTTTTCTTGGATGATGATGTTGTGGTACAGCGGGATCTTACAGGATTGT GGAAGATTGACAT GGATGGGAAGGTGAATGGAGCAGTGGAAACATGCTTTGGAT CGTTTCATCGGTATTGG ] [+] EMBL C28735 [ CTCGACCCCTCCAAGCACGTCTTCCACGTCGTCACCGACCGAATGAACCTTGGCGCCATGCAGGTGATAATTCGCCTAATGGACTTAAAAGGCGCGCACTATGAGGTCAAAGCATTTGAAGACTACAAGTTTCTTAACTCCTCATATGTTCCTGTGCTTCGGCAACTGGAGTCAGCAAACCTCCAGAAGTTCTATTTTGAGAACAAGCTTGAGAATGCTACAAAAGATGCTAGTANTATGAAGTTTAGGAACCCCAAGTATCTCTCGATGCTCAATCACTTGCGGTTCTATTTGCCGGAGATGTACCCAAAGCTGCACCGGATACTTTTCTTGGATGATGATGTTGTGGTACAGCGGGATCTTACAGGATTGTGGGANGATTGACATNGGATGGGAAGGTGAATGGAGCAGTTNGAACATGCTTTGGATCCGTTTCATCGG ATTn ] [+] EMBL CB096529 [ aggggGATGCTAGTAATATGAAGTTTAGGAACCCCAAGTATCTCTCGATGCTCAATCACTTGCGGTTCTATTTGCCGGAGATGTACCCAAAGCTGCACCGGATACTTTTCTTGGATGATGATGTTGTGGTACAGCGGGATCTTACAGGATTGT GGAAGATTGACAT GGATGGGAAGGTGAATGGAGCAGTGGAAACATGCTTTGGAT CGTTTCATCGGTATTGGCAGTATATGAACTTCTCGCACCCACTTATCAAAGAGAGGTTTAATCCTAATGCATGTGGATGGGCATATGGCATGAACTTCTTTGATCTTGATTCTTGGAGGAGAGAAAAGAGTACTGAGCAATATCATTACTGGCAGAGTCAGAATGAGAACAGGACATTATGGAAGCTAGGAACGTTGCCTCCTGGTTTGATCACATTCTACTCCACCACAAAGCCTCTGGAAAAATCTTGGCATGTTCTTGGACTCGGGTACAATCCAAGCATAAGCATGGAGGAGATTAGAAACGCTGCTGTTGTGCATTTCAACGGGAACATGAAGCCCTGGCTGGATATCGGTATGAACTAGTTCAGGCACCTATGGACAAAATACGTGGATTACGACGACTCATTCATTCGCCAATGCAATTTTGCACCACCGTAGAAGGAAAAGCCTTTGCCATTGTTCTACAGATATCAAGGAAGATTGGTAACTAGAGCTAGAGCCAC TGTAACAGTTAACACATGTACTATCGCATG TTTTGT GGAAATCTCAGGAGCCTGCGAATTAGAACTGCGGGAGG ] [-] EMBL CB643031 [ AGGTGAATGGAGCAGTGGAAACATGCTTTGGAT CGTTTCATCGGTATTGGCAGTATATGAACTTCTCGCACCCACTTATCAAAGAGAAGTTTAATCCTAATGCATGTGGATGGGCATATGGCATGAACTTCTTTGATCTTGATTCTTGGAGGAGAGAAAAGAGTACTGAGCAATATCATTACTGGCAGAGTCAGAATGAGAACAGGACATTATGGAAGCTAGGAACGTTGCCTCCTGGTTTGATCACATTCTACTCCACCACAAAGCCTCTGGAAAAATCTTGGCATGTTCTTGGACTCGGGTACAATCCAAGCATAAGCATGGAGGAGATTAGAAACGCTGCTGTTGTGCATTTCAACGGGAACATGAAGCCCTGGCTGGATATCGGTATGAACCAGTTCAGGCACCTATGGACAAAATACGTGGATTACGACGACTCATTCATTCGCCAATGCAATTTTGCACCACCGTAGAAGGAAAAGCCTTTGCCATTGTTCTACAGATATCAAGGAAGATTGGTAACTAGAGCTAGAGCCAC TGTAACAGTTAACACATGTACTATCGCATG TTTTGT GGAAATCTCAGGAGCCTGCGAATTAGAACTGC GGAGGACAAGAAATTCTTTCTAGATCTTGTTGTATGTCATCGATTAAGTTATGGTGAAAATGCTGTTCAAAACATGAACATTATTTTCATCCCGTTTGTAATAATCTTATGCGTGTCAGCGTGTGTATGCCAAAGTCATGTGCTATGTTCATAATGGGAAGACAATCTTACTAGGACAAATTATCAGAAAAAAAAAGA ] [+] EMBL C73265 [ AGAACAGGACATTATGGAAGCTAGGAACGTTGCCTCCTGGTTTNATCACATTCTACTCCACCACAAAGCCTCTGGAAAAATCTTGGCATGTNCTTGGACTCGGGTACAATCCAAGCATAAGCATGGAGGAGATTAGAAACGCTGCTGTTGTGCATTTCAACGGGAACATGAAGCCCTGGCTGGATATCGGTATGAACCAGTTCAGGCACCTATGGACAAAATACGTGGATTACGACGACTCATTCATTCGCCAATGCAATTTTGCACCACCGTAGAAGGAAAAGCCTTTGCCATTGTTCTACAGATATCAAGGAAGATTGGTACCTAGAGCTAGAGCCACTTGTAACAGTTACCACATGTACTATCGCATGTTTTTGTGGGAAATCTCAGGAGCCTGCGn ] [+] EMBL CA767412 [ GACATTATGGAAGCTAGGAACGTTGCCTCCTGGTTTGATCACATTCTACTCCACCACAAAGCCTCTGGAAAAATCTTGGCATGTTCTTGGACTCGGGTACAATCCAAGCATAAGCATGGAGGAGATTAGAAACGCTGCTGTTGTGCATTTCAACGGGAACATGAAGCCCTGGCTGGATATCGGTATGAACCAGTTCAGGCACCTATGGACAAAATACGTGGATTACGACGACTCATTCATTCGCCAATGCAATTTTGCACCACCGTAGAAGGAAAAGCCTTTGCCATTGTTCTACAGATATCAAGGAAGATTGGTAACTAGAGCTAGAGCCAC TGTAACAGTTAACACATGTACTATCGCATG TTTTGT GGAAATCTCAGGAGCCTGCGAATTAGAACTGC GGAGGACAAGAAATTCTTTCTAGATCTTGTTGTATGTCATCGATTAAGTTATGGTGAAAATGCTGTTCAAAACATGAACATTATTTTCATCCCGTTTGTAATAATCTTATGCGTGTCAGCGTGTGTATGCCAAAGTCATGTGCTATGTTCATAATATGAAGACAATCTTACTAGGACAAATTATCAGAAGATCAATGAACTCCTGTAGAGAAATATTGNGC] [+] EMBL AU161988 [ TGGAAAANTCTTGGCATGTTCTTGGACTCGGGTACAATCCAAGCATAAGCATGGAGGAGATTAGAANCGCTGCTGTTGTGCATTTCAACGGGAACATGAAGCCCTGGCTGGATATCGGTATGAACCAGTTCAGGCACCTATGGACAAAATACGTGGATTACGACGACTCATTCATTCGCCAATGCAATTTTGCACCACCGTAGAAGGAAAAGCCTTTGCCATTGTTCTACAGATATCAAGGAAGATTGGTAACTAGAGCTAGAGCCAC TGTAACAGTTAANACATGTACTATCGCATG TTTTGT GGAAATCTCAGGAGCCTGCGAATTAGAACTGC GGAGGACAAGAAATTCTTTCTAGATCTTGTTGTATGTCATCGATTAAGTTATGGTGAAAATGCTGTTCAAANCATGAACATTATTTTCANCCCGTTTGTAATAATCTTATGCGTGTCAGCGTGTGTATGCCAAAGTCATGTGCTATGTTCATAATATGAAGACAATCTTACTAGGACAAATTATCAGAAGATCAATGAACTCCTGTAGAGAAAaaaaaa ] [+] EMBL CF328111 [ CATTCATTCGCCAATGCAATTTTGCACCACCGTAGAAGGAAAAGCCTTTGCCATTGTTCTACAGATATCAAGGAAGATTGGTAACTAGAGCTAGAGCCAC TGTAACAGTTAACACATGTACTATCGCATG TTTTGT GGAAATCTCAGGAGCCTGCGAATTAGAACTGC GGAGGACAAGAAATTCTTTCTAGATCTTGTTGTATGTCATCGATTAAGTTATGGTGAAAATGCTGTTCAAAACATGAACATTATTTTCATCCCGTTTGTAATAATCTTATGCGTGTCAGCGTGTGTATGCCAAAGTCATGTGCTATGTTCATAATATGAAGACAATCTTACTAGGACAAAaaaaaaa ] [-] EMBL CF328112 [ ATTCATTCGCCAATGCAATTTTGCACCACCGTAGAAGGAAAAGCCTTTGCCATTGTTCTACAGATATCAAGGAAGATTGGTAACTAGAGCTAGAGCCAC TGTAACAGTTAACACATGTACTATCGCATG TTTTGT GGAAATCTCAGGAGCCTGCGAATTAGAACTGC GGAGGACAAGAAATTCTTTCTAGATCTTGTTGTATGTCATCGATTAAGTTATGGTGAAAATGCTGTTCAAAACATGAACATTATTTTCATCCCGTTTGTAATAATCTTATGCGTGTCAGCGTGTGTATGCCAAAGTCATGTGCTATGTTCATAATATGAAGACAATCTTACTAGGCCAAAaaaaaaaa ] consensusID : consensus_14020#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 664 fasta sequence [TTAATCCTAATGCATGTGGATGGGCATATGGCATGAACTTCTTTGATCTTGATTCTTGGAGGAGAGAAAAGAGTACTGAGCAATATCATTACTGGCAGAGTCAGAATGAGAACAGGCCATTATGGAAGCTAGGAACGTTGCCTCCTGGTTTGATCACATTCTACTCCACCACAAAGCCTCTGGAAAAATCTTGGCATGTTCTTGGACTCGGGTACAATCCAAGCATAAGCATGGAGGAGATTAGAAACGCTGCTGTTGTGCATTTCAACGGGAACATGAAGCCCTGGCTGGATATCGGTATGAACCAGTTCAGGCACCTATGGACAAAATACGTGGATTACGACGACTCATTCATTCGCCAATGCAATTTTGCACCACCGTAGAAGGAAAAGCCTTTGCCATTGTTCTACAGATATCAAGGAAGATTGGTAACTAGAGCTAGAGCCACTGTAACAGTTAACACATGTACTATCGCATGTTTTGTGGAAATCTCAGGAGCCTGCGAATTAGAACTACGGAGGACAAGAAATTCTTTCTAGATCTTGTTGTATGTCATCGATTAAGTTATGGTGAAAATGCTGTTCAAAACATGAACATTATTTTCATCCCGTTTGTAATAATTTTATGCGTGTCAAGCGTGTGTATGCCAAAAAAAAAAAAAAAA] [-] EMBL CA763555 [TTAATCCTAATGCATGTGGATGGGCATATGGCATGAACTTCTTTGATCTTGATTCTTGGAGGAGAGAAAAGAGTACTGAGCAATATCATTACTGGCAGAGTCAGAATGAGAACAGGCCATTATGGAAGCTAGGAACGTTGCCTCCTGGTTTGATCACATTCTACTCCACCACAAAGCCTCTGGAAAAATCTTGGCATGTTCTTGGACTCGGGTACAATCCAAGCATAAGCATGGAGGAGATTAGAAACGCTGCTGTTGTGCATTTCAACGGGAACATGAAGCCCTGGCTGGATATCGGTATGAACCAGTTCAGGCACCTATGGACAAAATACGTGGATTACGACGACTCATTCATTCGCCAATGCAATTTTGCACCACCGTAGAAGGAAAAGCCTTTGCCATTGTTCTACAGATATCAAGGAAGATTGGTAACTAGAGCTAGAGCCACTGTAACAGTTAACACATGTACTATCGCATGTTTTGTGGAAATCTCAGGAGCCTGCGAATTAGAACTACGGAGGACAAGAAATTCTTTCTAGATCTTGTTGTATGTCATCGATTAAGTTATGGTGAAAATGCTGTTCAAAACATGAACATTATTTTCATCCCGTTTGTAATAATTTTATGCGTGTCAAGCGTGTGTATGCCAAAAAAAAAAAAAAAA] [+] EMBL BE607487 [ GCCTCTGGAAAAATCTTGGCATGTTCTTGGACTCGGGTACAATCCAAGCATAAGCATGGAGGAGATTAGAAACGCTGCTGTTGTGCATTTCAACGGGAACATGAAGCCCTGGCTGGATATCGGTATGAACCAGTTCAGGCACCTATGGACAAAATACGTGGATTACGACGACTCATTCATTCGCCAATGCAATTTTGCACCACCGTAGAAGGAAAAGCCTTTGCCATTGTTCTACAGATATCAAGGAAGATTGGTAACTAGAGCTAGAGCCACTGTAACAGTTAACACATGTACTATCGCATGTTTTGTGGAAATCTCAGGAGCCTGCGAATTAGAACTACGGAGGACAAGAAATTCTTTCTAGATCTTGTTGTATGTCATCGATTAAGTTATGG ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14020#0 CGGCGGCTGTCAACGGGGACCGGCTCAGGGCGGAGCAGATCCGGAAGCAGGCGAAGGACG 60 consensus_14020#1 ------------------------------------------------------------ consensus_14020#0 CGGCGGCCTCCGCCGCCGCGCTGGCCGCGGCGTCGCGCAGGCTCCACCTCGACCGCGCGC 120 consensus_14020#1 ------------------------------------------------------------ consensus_14020#0 GCCACCTCCGGCTGCTCTCCTCCCTCCACCGCAACCTCACCGCCACGCTCCGTGACCTCA 180 consensus_14020#1 ------------------------------------------------------------ consensus_14020#0 GCGCCGCCGCGTCGGCGTCGGCGTCCGCGTCCGCGTCCGAGGCCGGCTACGCGTCGGCGG 240 consensus_14020#1 ------------------------------------------------------------ consensus_14020#0 GGGACGAGGTGCGGCGGCTCGACCTTCAGGCCAAGGACCTGATCCGCGCCGCGCGCGCCG 300 consensus_14020#1 ------------------------------------------------------------ consensus_14020#0 CCATCGCGGACGCCAAGCCGCTGTTCGACCCGCAGCTCAAGATCCAGCGGCTCAAGGACG 360 consensus_14020#1 ------------------------------------------------------------ consensus_14020#0 CCATCTTCGCGCAGAACGAGTTGCTCGCGCGCGCCAAGAAGCGCGGCGCCTTCGCCTCCC 420 consensus_14020#1 ------------------------------------------------------------ consensus_14020#0 TCATCGCCGCCAAGTCCATCCCCAAGCCGCTCCACTGCCTCGCCGTCCGCCTCACCGCCG 480 consensus_14020#1 ------------------------------------------------------------ consensus_14020#0 AGCGGATCGCACGGCCCGAGAATTACGCCGACCCGGTGCCGCCGCCGCACGCGCTCGAGG 540 consensus_14020#1 ------------------------------------------------------------ consensus_14020#0 ACCCCGCCATGTTCCACTACGCCATCTTCTCCGACAACGTCCTCGCCGCCTCCGTCGTCG 600 consensus_14020#1 ------------------------------------------------------------ consensus_14020#0 TGCGCTCCGCCGTCGCCAACTCGCTCGACCCCTCCAAGCACGTCTTCCACGTCGTCACCG 660 consensus_14020#1 ------------------------------------------------------------ consensus_14020#0 ACCGAATGAACCTTGGCGCCATGCAGGTGATAATTCGCCTAATGGACTTAAAAGGCGCGC 720 consensus_14020#1 ------------------------------------------------------------ consensus_14020#0 ACTATGAGGTCAAAGCATTTGAAGACTACAAGTTTCTTAACTCCTCATATGTTCCTGTGC 780 consensus_14020#1 ------------------------------------------------------------ consensus_14020#0 TTCGGCAACTGGAGTCAGCAAACCTCCAGAAGTTCTATTTTGAGAACAAGCTTGAGAATG 840 consensus_14020#1 ------------------------------------------------------------ consensus_14020#0 CTACAAAAGATGCTAGTAATATGAAGTTTAGGAACCCCAAGTATCTCTCGATGCTCAATC 900 consensus_14020#1 ------------------------------------------------------------ consensus_14020#0 ACTTGCGGTTCTATTTGCCGGAGATGTACCCAAAGCTGCACCGGATACTTTTCTTGGATG 960 consensus_14020#1 ------------------------------------------------------------ consensus_14020#0 ATGATGTTGTGGTACAGCGGGATCTTACAGGATTGTGGAAGATTGACATGGATGGGAAGG 1020 consensus_14020#1 ------------------------------------------------------------ consensus_14020#0 TGAATGGAGCAGTGGAAACATGCTTTGGATCGTTTCATCGGTATTGGCAGTATATGAACT 1080 consensus_14020#1 ------------------------------------------------------------ consensus_14020#0 TCTCGCACCCACTTATCAAAGAGAAGTTTAATCCTAATGCATGTGGATGGGCATATGGCA 1140 consensus_14020#1 ---------------------------TTAATCCTAATGCATGTGGATGGGCATATGGCA 33 ********************************* consensus_14020#0 TGAACTTCTTTGATCTTGATTCTTGGAGGAGAGAAAAGAGTACTGAGCAATATCATTACT 1200 consensus_14020#1 TGAACTTCTTTGATCTTGATTCTTGGAGGAGAGAAAAGAGTACTGAGCAATATCATTACT 93 ************************************************************ consensus_14020#0 GGCAGAGTCAGAATGAGAACAGGACATTATGGAAGCTAGGAACGTTGCCTCCTGGTTTGA 1260 consensus_14020#1 GGCAGAGTCAGAATGAGAACAGGCCATTATGGAAGCTAGGAACGTTGCCTCCTGGTTTGA 153 *********************** ************************************ consensus_14020#0 TCACATTCTACTCCACCACAAAGCCTCTGGAAAAATCTTGGCATGTTCTTGGACTCGGGT 1320 consensus_14020#1 TCACATTCTACTCCACCACAAAGCCTCTGGAAAAATCTTGGCATGTTCTTGGACTCGGGT 213 ************************************************************ consensus_14020#0 ACAATCCAAGCATAAGCATGGAGGAGATTAGAAACGCTGCTGTTGTGCATTTCAACGGGA 1380 consensus_14020#1 ACAATCCAAGCATAAGCATGGAGGAGATTAGAAACGCTGCTGTTGTGCATTTCAACGGGA 273 ************************************************************ consensus_14020#0 ACATGAAGCCCTGGCTGGATATCGGTATGAACCAGTTCAGGCACCTATGGACAAAATACG 1440 consensus_14020#1 ACATGAAGCCCTGGCTGGATATCGGTATGAACCAGTTCAGGCACCTATGGACAAAATACG 333 ************************************************************ consensus_14020#0 TGGATTACGACGACTCATTCATTCGCCAATGCAATTTTGCACCACCGTAGAAGGAAAAGC 1500 consensus_14020#1 TGGATTACGACGACTCATTCATTCGCCAATGCAATTTTGCACCACCGTAGAAGGAAAAGC 393 ************************************************************ consensus_14020#0 CTTTGCCATTGTTCTACAGATATCAAGGAAGATTGGTAACTAGAGCTAGAGCCACTGTAA 1560 consensus_14020#1 CTTTGCCATTGTTCTACAGATATCAAGGAAGATTGGTAACTAGAGCTAGAGCCACTGTAA 453 ************************************************************ consensus_14020#0 CAGTTAACACATGTACTATCGCATGTTTTGTGGAAATCTCAGGAGCCTGCGAATTAGAAC 1620 consensus_14020#1 CAGTTAACACATGTACTATCGCATGTTTTGTGGAAATCTCAGGAGCCTGCGAATTAGAAC 513 ************************************************************ consensus_14020#0 TGCGGAGGACAAGAAATTCTTTCTAGATCTTGTTGTATGTCATCGATTAAGTTATGGTGA 1680 consensus_14020#1 TACGGAGGACAAGAAATTCTTTCTAGATCTTGTTGTATGTCATCGATTAAGTTATGGTGA 573 * ********************************************************** consensus_14020#0 AAATGCTGTTCAAAACATGAACATTATTTTCATCCCGTTTGTAATAATCTTATGCGTGTC 1740 consensus_14020#1 AAATGCTGTTCAAAACATGAACATTATTTTCATCCCGTTTGTAATAATTTTATGCGTGTC 633 ************************************************ *********** consensus_14020#0 A-GCGTGTGTATGCCAAAGTCATGTGCTATGTTCATAATATGAAGACAATCTTACTAGGA 1799 consensus_14020#1 AAGCGTGTGTATGCCAAAAAAAAAAAAAAAA----------------------------- 664 * **************** * * consensus_14020#0 CAAATTATCAGAAGATCAATGAACTCCTGTAGAGAAATATTGNGC 1844 consensus_14020#1 --------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||