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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14045#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 1258 fasta sequence
[GCCGCTTTGTGCTTCGCTTTGCGCTCTCTCTATCTCTCTCTCTTCCAAAACCCTAACCCTAGCGGCGGGCGGGAGCGGCGGAGGAGGAGGGCGCGGCGGCGGTGGGGTGGTAGTGGTGGTGGGTGGAATGGACGGAGGCGGGGCGCACCGCACGCCGGAGGACGTGTTCCGGGACTTCCGCGCGCGGCGGGCCGGGATGATCAAGGCGCTGACCACAGATGTGGAGAAGTTCTACCAGCAGTGCGACCCAGAGAAAGAGAATTTGTGTTTATATGGTCTTCCCAATGAGACATGGGAAGTGAACTTGCCTGCTGAGGAGGTTCCTCCAGAGCTTCCAGAACCAGCTCTGGGAATTAATTTTGCTCGGGATGGGATGGATGAGAAAGATTGGCTGTCACTTGTTGCGGTTCATAGTGATACCTGGCTGCTAGCAGTAGCCTTTTACTTTGGAGCAAGATTCGGGTTTGACAAAGAATCCAGGAAACGGCTTTTTAGCATGATTAACAACCTTCCAACCATATATGAGGTTGTCACTGGGACTGCAAAGAAGCAGAGCAAAGAAAAAACCCCCAAGACCAGTGGCAAGAGCAATAAATCCGGCACGAAGCCATCGCGCCAGCCGGAACCCAACTCTAGGGGTCCAAAGATGCCACCTCCGAAGGATG-AGGATGATAGCGGAGGTGAGGAAGAGGAGGAAGAAGAAGATCACGAAAACACATTATGTGGTGCATGTGGTGACAACTATGGACAGGATGAG-TTCTGGATCTGCTGCGATGCTTGTGAGACATGGTTCCACGGTAAGTGTGTCAAGATAACCCC-TGCCAAGGC-TGAGCACATCAAGCACTACA-AGTGCCCGA-AC-TGCAGCAGTAGTAGCAAGAGAGCCAGAGCTTGAT-GGTGGATCCCTCTATGGCTTATGTC-TGAAGAACCAA-GAATTTGAC-TCGCTGTAAAGACCCTCATGAGATAGAATGCCCAATGGATATGCATTCAGCTGTTGGTTTTCAGTTTAGGACCAGCTTTAGGGTCTTTAATGTGTTGTTTGGTGTATGTCAATGGCATCAATTCTAGATTTTCTGTTAGTAGTAGAAACTAACTGTAATAGCTTATGCTTCTTCAAGCCCTTCTAAGTGCACCTGTACTGGACTCTT-TAGTGTTTTAGATTTGAATTGTGTATTTGTGTCAAACATGTACTCTTGTAGTTTGTTAAAAATTGCTTGTGGTCATTTATTCTCAGCCTCATTATTGAAAAAAAAAAAAAAAA]
[+] EMBL AU225934 [GCCGCTTTGTGCTTCGCTTTGCGCTCTCTCTATCTCTCTCTCTTCCAAAACCCTAACCCTAGCGGCGGGCGGGAGCGGCGGAGGAGGAGGGCGCGGCGGCGGTGGGGTGGTAGTGGTGGTGGGTGGAATGGACGGAGGCGGGGCGCACCGCACGCCGGAGGACGTGTTCCGGGACTTCCGCGCGCGGCGGGCCGGGATGATCAAGGCGCTGACCACAGATGTGGAGAAGTTCTACCAGCAGTGCGACCCAGAGAAAGAGAATTTGTGTTTATATGGTCTTCCCAATGAGACATGGGAAGTGAACTTGCCTGCTGAGGAGGTTCCTCCAGAGCTTCCAGAACCAGCTCTGGGAATTAATTTTGCTCGGGATGGGATGGATGAGAAAGATTGGCTGTCACTTGTTGCGGTTCATAGTGATACCTGGCTGCTACCAGTACCCTTTT ]
[+] EMBL CB655337 [ GCCCTCTTTCTATCTCTCTCTCTTCCAAAACCCTAACCCTAGCGGCGGGCGGGAGCGGCGGAGGAGGAGGGCGCGGCGGCGGTGGGGTGGTAGTGGTGGTGGGTGGAATGGACGGAGGCGGGGCGCACCGCACGCCGGAGGACGTGTTCCGGGACTTCCGCGCGCGGCGGGCCGGGATGATCAAGGCGCTGACCACAGATGTGGAGAAGTTCTACCAGCAGTGCGACCCAGAGAAAGAGAATTTGTGTTTATATGGTCTTCCCAATGAGACATGGGAAGTGAACTTGCCTGCTGAGGATGTTCCTCCAGAGCTTCCAGAACCAGCTCTGGGAATTAATTTTGCTCGGGATGGGATGGATGAGAAAGATTGGCTGTCACTTGTTGCGGTTCATAGTGATACCTGGCTGCTAGCAGTAGCCTTTTACTTTGGAGCAAGATTCGGGTTTGACAAAGAATCCAGGAAACGGCTTTTTAGCATGATTAACAACCTTCCAACCATATATGAGGTTGTCACTGGGACTGCAAAGAAGCAGAGCAAAGAAAAAACCCCCAAGACCAGTGGCAAGAGCAATAAATCCGGCACGA ]
[+] EMBL BP184795 [ CTATCTCTCTCTCTTCCAAAACCCTAACCCTAGCGGCGGGCGGGAGCGGCGGAGGAGGAGGGCGCGGCGGCGGTGGGGTGGTAGTGGTGGTGGGTGGAATGGACGGAGGCGGGGCGCACCGCACGCCGGAGGACGTGTTCCGGGACTTCCGCGCGCGGCGGGCCGGGATGATCAAGGCGCTGACCACAGATGTGGAGAAGTTCTACCAGCAGTGCGACCCAGAGAAAGAGAATTTGTGTTTATATGGTCTTCCCAATGAGACATGGGAAGTGAACTTGCCTGCTGAGGAGGTTCCTCCAGAGCTTCCAGAACCAGCTCTGGGAATTAATTTTGCTCGGGATGGGATGGATGAGAAAGATTGGCTGTCACTTGTTGCGGTTCATAGTGATACCTGGCTGCTAGCAGTAGCCTTTTACTTTGGAGCAAGATTCGGGTTTGACAAAGAATCCAGGAAACGGCTTTTTAGCATGATTAACAACCTTCCAACCATATATGAGGTTGTCACTGGGACTGCAAAGAAGCAGAG ]
[+] EMBL AK103215 [ CTCTTCCAAAACCCTAACCCTAGCGGCGGGCGGGAGCGGCGGAGGAGGAGGGCGCGGCGGCGGTGGGGTGGTAGTGGTGTTGGGTGGAATGGACGGAGGCGGGGCGCACCGCACGCCGGAGGACGTGTTCCGGGACTTCCGCGCGCGGCGGGCCGGGATGATCAAGGCGCTGACCACAGATGTGGAGAAGTTCTACCAGCAGTGCGACCCAGAGAAAGAGAATTTGTGTTTATATGGTCTTCCCAATGAGACATGGGAAGTGAACTTGCCTGCTGAGGAGGTTCCTCCAGAGCTTCCAGAACCAGCTCTGGGAATTAATTTTGCTCGGGATGGGATGGATGAGAAAGATTGGCTGTCACTTGTTGCGGTTCATAGTGATACCTGGCTGCTAGCAGTAGCCTTTTACTTTGGAGCAAGATTCGGGTTTGACAAAGAATCCAGGAAACGGCTTTTTAGCATGATTAACAACCTTCCAACCATATATGAGGTTGTCACTGGGACTGCAAAGAAGCAGAGCAAAGAAAAAACCCCCAAGACCAGTGGCAAGAGCAATAAATCCGGCACGAAGCCATCGCGCCAGCCGGAACCCAACTCTAGGGGTCCAAAGATGCCACCTCCGAAGGATG AGGATGATAGCGGAGGTGAGGAAGAGGAGGAAGAAGAAGATCACGAAAACACATTATGTGGTGCATGTGGTGACAACTATGGACAGGATGAG TTCTGGATCTGCTGCGATGCTTGTGAGACATGGTTCCACGGTAAGTGTGTCAAGATAACCCC TGCCAAGGC TGAGCACATCAAGCACTACA AGTGCCCGA AC TGCAGCAGTAGTAGCAAGAGAGCCAGAGCTTGAT GGTGGATCCCTCTATGGCTTATGTC TGAAGAACCAA GAATTTGAC TCGCTGTAAAGACCCTCATGAGATAGAATGCCCAATGGATATGCATTCAGCTGTTGGTTTTCAGTTTAGGACCAGCTTTAGGGTCTTTAATGTGTTGTTTGGTGTATGTCAATGGCATCAATTCTAGATTTTCTGTTAGTAGTAGAAACTAACTGTAATAGCTTATGCTTCTTCAAGCCCTTCTAAGTGCACCTGTACTGGACTCTT TAGTGTTTTAGATTTGAATTGTGTATTTGTGTCAAACATGTACTCTTGTAGTTTGTTAAAAATTGCTTGTGGTC ]
[+] EMBL OSS2832A [ TAGCGGCGGGCGGGAGCGGCGGAGGAGGAGGGCGCGGCGGCGGTGGGGTGGTAGTGGTGGTGGGTGGAATGGACGGAGGCGGGGCGCACCGCACGCCGGAGGACGTGTTCCGGGACTTCCGCGCGCGGCGGGCCGGGATGATCAAGGCGCTGACCACAGATGTGGAGAAGTTCTACCAGCAGTGCGACCCAGAGAAAGAGAATTTGTGTTTATATGGTCTTCCCAATGAGACATGGGAAGTGAACTTGCCTGCTGAGGAGGTTCCTCCAGAG ]
[+] EMBL BP184848 [ ACGAGGGCGGGGCGCACCGCACGCCGGAGGACGTGTTCCGGGACTTCCGCGCGCGGCGGGCCGGGATGATCAAGGCGCTGACCACAGATGTGGAGAAGTTCTACCAGCAGTGCGACCCAGAGAAAGAGAATTTGTGTTTATATGGTCTTCCCAATGAGACATGGGAAGTGAACTTGCCTGCTGAGGAGGTTCCTCCAGAGCTTCCAGAACCAGCTCTGGGAATTAATTTTGCTCGGGATGGGATGGATGAGAAAGATTGGCTGTCACTTGTTGCGGTTCATAGTGATACCTGGCTGCTAGCAGTAGCCTTTTACTTTGGAGCAAGATTCGGGTTTGACAAAGAATCCAGGAAACGGCTTTTTAGCATGATTAACAACCTTCCAACCATATATGAGGTTGTCACTGGGACTGCAAAGAAGCAGAGCAAAGAAAAAACCCCCAAGACCAGTGGCAAGAGCAATAAATCCGGCACGAAGCCATCGCGCCAGCCGGAACCCAACTCTAGGGGTCCAAAGATGCCACCTCCGAAGGATG AGGATGATAGCGGAGGTGAGGAAGAGGAGGAAGAAGAAGATCACGAAAACACATTATGTGGTGCATGTGGTGACAACTATGGACAGGATGAG TTCTGGATCTGCTGCGATGCTTGTGAGACATGG ]
[+] EMBL OSC21371 [ CACGNCGGAGGACGTGTTCCGGGACTTCCGCGCGCGGCGGGCCGGGATGATCAAGGCGCTGACCACAGATGTGGAGAAGTTCTACCAGCAGTGCGACCCAGAGAAAGAGAATTTGTGTTTATATGGTCTTCCCAATGAGACATGGGAAGTGAACTTGCCTGCTGAGGAGGTTCCTCCAGAGCTTCCAGAACCAGCTCTGGGAATTAATTTTGCTCGGGATGGGATGGATGAGAAAGATTGGCTGTCACTTGTTGCGGTTCATAGTGATACCTGGCTGCTAGCAGTAGCCTTTTACTTTGGAGCAAGATTCGGGTTTGACAAAGAATCCAGGAAACGGCTTTTTAGCATGATTAAC ACCTTCCAACCATATATGAGGTTGTCACTGGGACTGCAAAG AGCAGAGCAAAG ]
[-] EMBL CA305668 [ GCATGATTAACAACCTTCCAACCATATATGAGGTTGTCACTGGGACTGCAAAGAAGCAGAGCAAAGAAAAAACCCCCAAGACCAGTGGCAAGAGCAATAAATCCGGCACGAAGCCATCGCGCCAGCCGGAACCCAACTCTAGGGGTCCAAAGATGCCACCTCCGAAGGATG AGGATGATAGCGGAGGTGAGGAAGAGGAGGAAGAAGAAGATCACGAAAACACATTATGTGGTGCATGTGGTGACAACTATGGACAGGATGAG TTCTGGATCTGCTGCGATGCTTGTGAGACATGGTTCCACGGTAAGTGTGTCAAGATAACCCC TGCCAAGGC TGAGCACATCAAGCACTACA AGTGCCCGA AC TGCAGCAGTAGTAGCAAGAGAGCCAGAGCTTGAT GGTGGATCCCTCTATGGCTTATGTC TGAAGAACCAA GAATTTGAC TCGCTGTAAAGACCCTCATGAGATAGAATGCCCAATGGATATGCATTCAGCTGTTGGTTTTCAGTTTAGGACCAGCTTTAGGGTCTTTAATGTGTTGTTTGGTGTATGTCAATGGCATCAATTCTAGATTTTCTGTTAGTAGTAGAAACTAACTGTAATAGCTTATGCTTCTTCAAGCCCTTCTAA ]
[-] EMBL CB655338 [ AAACCCCCAAGACCAGTGGCAAGAGCAATAAATCCGGCAGGAAGCCATCGCGCCAGCCGGAACCCAACTTTAGGGGTCCAAAGATGCCACCTCCGAAGGATG AGGATGATAGCGGAGGTGAGGAAGAGGAGGAAGAAGAAGATCACGAAAACACATTATGTGGTGCATGTGGTGACAACTATGGACAGGATGAG TTCTGGATCTGCTGCGATGCTTGTGAGACATGGTTCCACGGTAAGTGTGTCAAGATAACCCC TGCCAAGGC TGAGCACATCAAGCACTACA AGTGCCCGA AC TGCAGCAGTAGTAGCAAGAGAGCCAGAGCTTGAT GGTGGATCCCTCTATGGCTTATGTC TGAAGAACCAA GAATTTGAC TCGCTGTAAAGACCCTCATGAGATAGAATGCCCAATGGATATGCATTCAGCTGTTGGTTTTCAGTTTAGGACCAGCTTTAGGGTCTTTAATGTGTTGTTTGGTGTATGTCAATGGCATCAATTCTAGATTTTCTGTTAGTAGTAGAAACTAACTGTAATAGCTTATGCTTTTTCAAGCCCTTTTAAGTGCACCTGTACTGGACTCTTCTAGTGTTTTAGATTTGAATTGGGTATTTGTGTCAAACATGTACTTTTGTAGTTTGTTAAAAATTGAGGGTGGTCATTTATTGTCAGC ]
[-] EMBL CA762849 [ AGTGGCAAGAGCAATAAATCCGGCACGAAGCCATCGCGCCAGCCGGAACCCAACTCTAGGGGTCCAAAGATGCCACCTCCGAAGGATG AGGATGATAACGGAGGTGAGGAAGAGGAGGAAGAAGAAGATCTCGAAAACACCTTATGTGGTGCATGTGGTGACAACTATGGACAGGATGAG TTTTGGATTTGCTGCGATGCTTGTGAGACATGGTTCCACGGTAAGTGTGTCAAGATAACCCC TGCCAAGGC TGAGCCCATCAAGCCCTTCA AGTGCCCGA AC TGCAGCAGTAGTAGCAAGAGAGCCAGAGCTTGAT GGTGGATCCCTCTATGGCTTATGTT TGAAGAACCAA GAATTTGAC TCGCTGTAAAGACCCTCCTGAGATAGAATGCCCAAAGGATATGCATTCAGCTGTTGGTTTTCAGTTTAGGACCAGCTTTAGGGTCTTTAATGTGTTGTTTGGTGTATGTCAATGGCATCAATTTTAGATTTTTTGTTAGTAGTAGAAACTAACTGTAATAGCTTATGCTTTTTCAAGCCCTTTTAAGTGCACCTGTACTGGACTCTT TAGTGTTTTAGATTTGAATTGTGTATTTGTGTCAAACATGTACCCTTGTAGTTTGTTAAAAAATGCTTGTGGTCATTTATTTTCAGCCTCCCTATTGAAAAAAAAAAAAAAAA]
[+] EMBL C93511 [ AATAAATCCGGCACGAAGCCATCGCNCCA CCGGAACCCAACTCTAGGGGTCCAAAGATGCCACCTCCGAA GATGNAGGATGATAGCGGAGGTGAGGAAGAGGAGGAAGAAGAAGATCACGAAAACACATTATGTGGTGCATGTGGTGACAACTATGGACAGGATGAG TTCTGGATCTGCTGCGATGCTTGTGAGACATGGTTCCACGGTAAGTGTGTCAAGATAACCCCTTGCCAAGGCTTGAGCACATCAAGCACTACA AGTNCCNGA AC TGCAGCAGTAGTAGCAAGAGAGCCAGAGTTTGATGGGTGGATCCCTCTATGGCTTATGTCTTGAAGGACCAAGGNATTTGACTTCGCTGT AAGACCCTCATGAGATAGAATGCCCAATGGATATGCATTCA NTGTTGGTTTTAAGTTAGGGACCA CTTTGGGGNCTTT ]
[-] EMBL CA999269 [ ATGATAGTGGAGGTGAGGAAGAGGAGGAAGAAGAAGATCACGAAAACACATTATGTGGTGCATGTGGTGACAACTATGGACAGGATGAG TTCTGGATCTGCTGCGATGCTTGTGAGACATGGTTCCACGGTAAGTGTGTCAAGATAACCCC TGCCAAGGC TGAGCACATCAAGCACTACA AGTGCCCGA AC TGCACCAGTAGTAGCAAGAGAGCCAGAGCTTGAT GGTGGATCCCTCTATGGCTTATGTC TGAAGAACCAA GAATTTGAC TCGCTGTAAAGACCCTCATGAGATAGAATGCCCAATGGATATGCATTCAGCTGTTGGTTTTCAGTTTAGGACCAGCTTTAGGGTCTTTAATGTGTTGTTTGGTGTATGTCAATGGCATCAATTCTAGATTTTCTGTTAGTAGTAGAAACTAACTGTAATAGCTTATGCTTCTTCAAGCCCTTCTAAGTGCACCTGTACTGGACTCTT TAGTGTTTTAGATTTGAATTGTGTATTTGTGTCAAACATGTACTCTTGTAGTTTGTTAAAAATTGCTTGTGGTCATTTATTCTCAGCCTCATTAT ]
[+] EMBL BI812000 [ GGATGAGTTTCTGGATCTGCTGCGATGCTTGTGAGACATGGTTCCACGGTAAGTGTGTCAAGATAACCCC TGCCAAGGC TGAGCACATCAAGCACTACAGAGTGCCCGAGACTTGCAGCAGTAGTAGCAAGAGACCCAGAGCTTGAT GGTGGATCCCTCTATGGCTTATGTC TGAAGAACCAA GAATTTGAC TCGCTGTAAAGACCCTCATGAGATAGAATGCCCAATGGATATGCATTCAGCTGTTGGTTTTCAGTTTAGGACCAGCTTTAGGGTCTGTAATGTGTTGTTTGGTGTATGTCAATGGCATCAATTCTAGATTTTCTGTTAGTAGTAGAAACTAACTGTAATAGCTTATGCTTCTTCAAGCCCTT TAAGTGCACCTGTACTGGACTCTT TAGTGTTTTAGATTTGAATTGTGTATTTGTGTCAAACATGTACCCTTGTAGTTTGTTAAAAATTGCTTGTGGTCATTTATTCTCAGCCTCATTATTGATAAAAAA ]
[-] EMBL AU174857 [ GA AC TGCAGCAGTAGTAGCAAGAGAGCCAGAGCTTGAT GGTGGATCCCTCTATGGCTTATGTC TGAAGAACCAA GAATTTGAC TCGCTGTAAAGACCCTCATGAGATAGAATGCCCAATGGATATGCATTCAGCTGTTGGTTTTCAGTTTAGGACCAGCTTTAGGGTCTTTAATGTGTTGTTTGGTGTATGTCAATGGCATCAATTCTAGATTTTCTGTTAGTAGTAGAAACTAACTGTAATAGCTTATGCTTCTTCAAGCCCTTCTAAGTGCACCTGTACTGGACTCTT TAGTGTTTTAGATTTGAATTGTGTATTTGTGTCAAACATGTACTCTTGTAGTTTGTTAAAAATTG ]
[-] EMBL AU174858 [ GCAGTAGTAGCAAGAGAGCCAGAGCTTGAT GGTGGATCCCTCTATGGCTTATGTC TGAAGAACCAA GAATTTGAC TCGCTGTAAAGACCCTCATGAGATAGAATGCCCAATGGATATGCATTCAGCTGTTGGTTTTCAGTTTAGGACCAGCTTTAGGGTCTTTAATGTGTTGTTTGGTGTATGTCAATGGCATCAATTCTAGATTTTCTGTTAGTAGTAGAAACTAACTGTAATAGCTTATGCTTCTTCAAGCCCTTCTAAGTGCACCTGTACTGGACTCTT TAGTGTTTTAGATTTGAATTGTGTATTTGTGTCAAACATGTACTCTTGTAGTTTGTTAAAAATTGCTTGTGGTCAT ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||