These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14052#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1962 fasta sequence [TCGCCTTGCTTGATTTGCCTCGCCTGCCCTTTTTCTCGCGCGGCCGCCTCCGAGATTTCTCCTCCTCCTCCTCCTCCTCGACTCGACTCGACTCACCCCCCACTGAAATCTTCCTCCCACCACCGCGCCGCGACGTCGCACGCCCCCGCGGCCGCCGCCGACGTCGCTGTACCCCCAAACCCTAGCCCCGCTAGCGGGAGCGGTCGAGCACACACGCACGCGCGCGCGCGCGCGCGGAGTTCTCTCTCTCTCCTGTTGACCACCTGCAGATCGCCCGCGCGATGGGATCCAAGGACGGGAGTGGAGCCGCCTCGTCGGGAGGCGGCGGGGGCTTCTTCTCCTCGATCGCCGCCGGCGTGCGCAGCTTGGGCACCGCCGTCCACAAATCTGTCAACGGGTTGGTCGGCTATGAAGGACTTGAAGTTATTAACCCAGATGGAGGCACAG-AAGATGCGGAAGCTGAGGCTTTGAGAGGGCGATGGAAACAAGAGGATCGTGATAGTTATTGG-AAGATGATGCACAAGTACATAGGGGCAGATGTTACATCACTTGTGACACTTCCGGTCATCATTTTTGAGCCAATGACAATGCTTCAGAAAATGGCAGAGTTGATGGAATACTGTGAACTTTTAGACAAAGCAGATGAATGCGAAGACCCGTACATGCGTATGGCATATGCCTCTGCATGGGCTGTATCGGTCTACTTTGCATACCAGCGTACCTGGAAGCCTTTCAATCCCATCCTTGGGGAGACATATGAGATGGTTAACCACCAGGGTATTTCATTTATTGCTGAGCAGGTAAGCCATCATCCTCCGATGGGTGCCGCTCACTGTGAAAATGCACATTTTACATATGACATCACCTCCAAGTTGAAGACCAAATTCTTGGGGAACTCTCTGGAAGTTTATCCACTTGGAAGGACTAGAGTGTCACTTAAGAAGTCCGGTGTCAAGCTGGAATTGGTACCACCACTCACGAAGGTCAACAACTTGATATTTGGGCGTACTTGGGTTGATTCTCCTGGAGAGATGGTATTGACAAACCTGACAACTGGAGACAAAGTTGTGCTTTTATTCCAGCCATGTGGCTGGTTTGGGGCTGGTCGGTACGAGGTGGATGGCTATGTGTATAGTGCAGCTGAAGAACCCAAAATAATGATAACTGGAAAGTGGAACCAGTCCATGAGTTGTCAGCCATGCGATCAAGAAGGCGATCCTCTTCCAGGAACTGAGCTAAAGGAGATATGGAGAGTTGCTCCTACTCCACCAAATGACAAGTACCAGTACACGCACTTCGCGCACAAAATAAACAGCTTCGATACGGCGCCGAAGAAGCTATTGGCATCGGACTCCCGATTGAGGCCTGATAGATATGCCCTCGAGAAGGGTGACATGTCAAAATCAGGTTCAGAAAAGAGCAGGCTTGAAGAGCAACAAAGAGCTGAGAAAAGAACACGAGAGGCCAAGGGGGAGCAATTTACTCCAAGATGGTTTAACAGGACCGATGAAATCGCCCCTACACCCTGGGGCGAGCTGGAAGTGTATGAATACAATGGAAAATACACCGAGCACCGCGCTGCCATTGACAGCTCAAGTGTGGCCGACGACGATACAGACGTCACTTCGATCGAATTCAACCCGTGGCAGTACAGTAGCTCATCTTCCCAATGATTTTCGTA-GGGTCTGAAACTGCACATCCGTATTTTTATTATCCAATATGCTTCCAGGCCTTGCTTTGCACGCTGATTCATCTCAGCAGAGTTTTCGTGCCTTTGTAGTATTATGACCTTCACTTTTTCCCTTCTTCATGCTTCTACTGTTCAGGAAGTGATGGTGTATTCGATGTAGTCCATATACTGTCGTTGTTAATCTAGCGAAAATTACAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTTTAAAAAAAAAAACCACTGTCTTGCCGTTACGTACCGTAT] [+] EMBL AK060769 [TCGCCTTGCTTGATTTGCCTCGCCTGCCCTTTTTCTCGCGCGGCCGCCTCCGAGATTTCTCCTCCTCCTCCTCCTCCTCGACTCGACTCGACTCACCCCCCACTGAAATCTTCCTCCCACCACCGCGCCGCGACGTCGCACGCCCCCGCGGCCGCCGCCGACGTCGCTGTACCCCCAAACCCTAGCCCCGCTAGCGGGAGCGGTCGAGCACACACGCACGCGCGCGCGCGCGCGCGGAGTTCTCTCTCTCTCCTGTTGACCACCTGCAGATCGCCCGCGCGATGGGATCCAAGGACGGGAGTGGAGCCGCCTCGTCGGGAGGCGGCGGGGGCTTCTTCTCCTCGATCGCCGCCGGCGTGCGCAGCTTGGGCACCGCCGTCCACAAATCTGTCAACGGGTTGGTCGGCTATGAAGGACTTGAAGTTATTAACCCAGATGGAGGCACAG AAGATGCGGAAGCTGAGGCTTTGAGAGGGCGATGGAAACAAGAGGATCGTGATAGTTATTGG AAGATGATGCACAAGTACATAGGGGCAGATGTTACATCACTTGTGACACTTCCGGTCATCATTTTTGAGCCAATGACAATGCTTCAGAAAATGGCAGAGTTGATGGAATACTGTGAACTTTTAGACAAAGCAGATGAATGCGAAGACCCGTACATGCGTATGGCATATGCCTCTGCATGGGCTGTATCGGTCTACTTTGCATACCAGCGTACCTGGAAGCCTTTCAATCCCATCCTTGGGGAGACATATGAGATGGTTAACCACCAGGGTATTTCATTTATTGCTGAGCAGGTAAGCCATCATCCTCCGATGGGTGCCGCTCACTGTGAAAATGCACATTTTACATATGACATCACCTCCAAGTTGAAGACCAAATTCTTGGGGAACTCTCTGGAAGTTTATCCACTTGGAAGGACTAGAGTGTTACTTAAGAAGTCCGGTGTCAAGCTGGAATTGGTACCACCACTCACGAAGGTCAACAACTTGATATTTGGGCGTACTTGGGTTGATTCTCCTGGAGAGATGGTATTGACAAACCTGACAACTGGAGACAAAGTTGTGCTTTTATTCCAGCCATGTGGCTGGTTTGGGGCTGGTCGGTACGAGGTGGATGGCTATGTGTATAGTGCAGCTGAAGAACCCAAAATAATGATAACTGGAAAGTGGAACCAGTCCATGAGTTGTCAGCCATGCGATCAAGAAGGCGATCCTCTTCCAGGAACTGAGCTAAAGGAGATATGGAGAGTTGCTCCTACTCCACCAAATGACAAGTACCAGTACACGCACTTCGCGCACAAAATAAACAGCTTCGATACGGCGCCGAAGAAGCTATTGGCATCGGACTCCCGATTGAGGCCTGATAGATATGCCCTCGAGAAGGGTGACATGTCAAAATCAGGTTCAGAAAAGAGCAGGCTTGAAGAGCAACAAAGAGCTGAGAAAAGAACACGAGAGGCCAAGGGGGAGCAATTTACTCCAAGATGGTTTAACAGGACCGATGAAATCGCCCCTACACCCTGGGGCGAGCTGGAAGTGTATGAATACAATGGAAAATACACCGAGCACCGCGCTGCCATTGACAGCTCAAGTGTGGCCGACGACGATACAGACGTCACTTCGATCGAATTCAACCCGTGGCAGTACAGTAGCTCATCTTCCCAATGATTTTCGTA GGGTCTGAAACTGCACATCCGTATTTTTATTATCCAATATGCTTCCAGGCCTTGCTTTGCACGCTGATTCATCTCAGCAGAGTTTTCGTGCCTTTGTAGTATTATGACCTTCACTTTTTCCCTTCTTCATGCTTCTACTGTTCAGGAAGTGATGGTGTATTCGATGTAGTCCATATACTGTCGTTGTTAATCTAGCGA ] [+] EMBL AU225702 [ gccgctCAAACCCTAGCCCCGCTAGCGGGAGCGGTCGAGCACACACGCACGCGCGCGCGCGCGCGCGGAGTTCTCTCTCTCTCCTGTTGACCACCTGCAGATCGCCCGCGCGATGGGATCCAAGGACGGGAGTGGAGCCGCCTCGTCGGGAGGCGGCGGGGGCTTCTTCTCCTCGATCGCCGCCGGCGTGCGCAGCTTGGGCACCGCCGTCCACAAATCTGTCAACGGGTTGGTCGGCTATGAAGGACTTGAAGTTATTAACCCAGATGGAGGCACAGAAAGATGCGGAAGCTGAGGCTTTGAGAGGGCGATGGAAACAAGAGGATCGTGATAGTTATTGGAAAGATGATGCACAAGTACATAGGGGCAGATGTTACATCACTTGTGACACTTCCGGTCATCATTTTTGAGCCAATGACAATGCTCCAGAAAATGGCAGAGTTGATGGAATA ] [+] EMBL CB623304 [ ACAAATCTGTCAACGGGTTGGTCGGCTATGAAGGACTTGAAGTTATTAACCCAGATGGAGGCACAG AAGATGCGGAAGCTGAGGCTTTGAGAGGGCGATGGAAACAAGAGGATCGTGATAGTTATTGG AAGATGATGCACAAGTACATAGGGGCAGATGTTACATCACTTGTGACACTTCCGGTCATCATTTTTGAGCCAATGACAATGCTTCAGAAAATGGCAGAGTTGATGGAATACTGTGAACTTTTAGACAAAGCAGATGAATGCGAAGACCCGTACATGCGTATGGCATATGCCTCTGCATGGGCTGTATCGGTCTACTTTGCATACCAGCGTACCTGGAAGCCTTTCAATCCCATCCTTGGGGAGACATATGAGATGGTTAACCACCAGGGTATTTCATTTATTGCTGAGCAGGTAAGCCATCATCCTCCGATGGGTGCCGCTCACTGTGAAAATGCACATTTTACATATGACATCACCTCCAAGTTGAAGACCAAATTCTTGGGGAACTCTCTGGAAGTTTATCCACTTGGAAGGACTAGAGTGTCACTTAAGAAGTCCGGTGTCAAGCTGGAATTGGTACCACCACTCACGAAGGTCAACAACTTGATATTTGGGCGTACTTGGGTTGATTCTCCTGGAGAGATGGTATTGACAAACCTGACAACTGGAGACAAAGTTGTGCTTTTATTCCAGCCATGTGGCTGGTTTGGGGCTGGTCGGTACGAGGTGGATGGCTATGTGTATAGTGCAGCTGAAGAACCCAAAATAATGATAACTGGAAAGTGGAACCAGTCCATGAGTTGTCA ] [+] EMBL CF196019 [ ACCACCAGGGTATTTCATTTATTGCTGAGCAGGTAAGCCATCATCCTCCGATGGGTGCCGCTCACTGTGAAAATGCACATTTTACATATGACATCACCTCCAAGTTGAAGACCAAATTCTTGGGGAACTCTCTGGAAGTTTATCCACTTGGAAGGACTAGAGTGTCACTTAAGAAGTCCGGTGTCAAGCTGGAATTGGTACCACCACTCACGAAGGTCAACAACTTGATATTTGGGCGTACTTGGGTTGATTCTCCTnnnnnnn ] [+] EMBL AK119251 [ TCCAGCCATGTGGCTGGTTTGGGGCTGGTCGGTACGAGGTGGATGGCTATGTGTATAGTGCAGCTGAAGAACCCAAAATAATGATAACTGGAAAGTGGAACCAGTCCATGAGTTGTCAGCCATGCGATCAAGAAGGCGATCCTCTTCCAGGAACTGAGCTAAAGGAGATATGGAGAGTTGCTCCTACTCCACCAAATGACAAGTACCAGTACACGCACTTCGCGCACAAAATAAACAGCTTCGATACGGCGCCGAAGAAGCTATTGGCATCGGACTCCCGATTGAGGCCTGATAGATATGCCCTCGAGAAGGGTGACATGTCAAAATCAGGTTCAGAAAAGAGCAGGCTTGAAGAGCAACAAAGAGCTGAGAAAAGAACACGAGAGGCCAAGGGGGAGCAATTTACTCCAAGATGGTTTAACAGGACCGATGAAATCGCCCCTACACCCTGGGGCGAGCTGGAAGTGTATGAATACAATGGAAAATACACCGAGCACCGCGCTGCCATTGACAGCTCAAGTGTGGCCGACGACGATACAGACGTCACTTCGATCGAATTCAACCCGTGGCAGTACAGTAGCTCATCTTCCCAATGATTTTCGTA GGGTCTGAAACTGCACATCCGTATTTTTATTATCCAATATGCTTCCAGGCCTTGCTTTGCACGCTGATTCATCTCAGCAGAGTTTTCGTGCCTTTGTAGTATTATGACCTTCACTTTTTCCCTTCTTCATGCTTCTACTGTTCAGGAAGTGATGGTGTATTCGATGTAGTCCATATACTGTCGTTGTTAATCTAGCGA ] [-] EMBL CB623305 [ CTGGTCGGTACGAGGTGGATGGCTATGTGTATAGTGCAGCTGAAGAACCCAAAATAATGATAACTGGAAAGTGGAACCAGTCCATGAGTTGTCAGCCATGCGATCAAGAAGGCGATCCTCTTCCAGGAACTGAGCTAAAGGAGATATGGAGAGTTGCTCCTACTCCACCAAATGACAAGTACCAGTACACGCACTTCGCGCACAAAATAAACAGCTTCGATACGGCGCCGAAGAAGCTATTGGCATCGGACTCCCGATTGAGGCCTGATAGATATGCCCTCGAGAAGGGTGACATGTCAAAATCAGGTTCAGAAAAGAGCAGGCTTGAAGAGCAACAAAGAGCTGAGAAAAGAACACGAGAGGCCAAGGGGGAGCAATTTACTCCAAGATGGTTTAACAGGACCGATGAAATCGCCCCTACACCCTGGGGCGAGCTGGAAGTGTATGAATACAATGGAAAATACACCGAGCACCGCGCTGCCATTGACAGCTCAAGTGTGGCCGACGACGATACAGACGTCACTTCGATCGAATTCAACCCGTGGCAGTACAGTAGCTCATCTTCCCAATGATTTTCGTA GGGTCTGAAACTGCACATCCGTATTTTTATTATCCAATATGCTTCCAGGCCTTGCTTTGCACGCTGATTCATCTCAGCAGAGTTTTCGTGCCTTTGTAGTATTATGACCTTCACTTTTTCCCTTCTTCATGCTTCTACTGTTCAGGAAGTGATGGTGTATTCGATGTAGTCCATATACTGTCGTTGTTAATCTAGCGAAAATTACAACAtttcccttg ] [+] EMBL CF315064 [ TGAGTTGTCAGCCATGCGATCAAGAAGGCGATCCTCTTCCAGGAACTGAGCTAAAGGAGATATGGAGAGTTGCTCCTACTCCACCAAATGACAAGTACCAGTACACGCACTTCGCGCACAAAATAAACAGCTTCGATACGGCGCCGAAGAAGCTATTGGCATCGGACTCCCGATTGAGGCCTGATAGATATGCCCTCGAGAAGGGTGACATGTCAAAATCAGGTTCAGAAAAGAGCAGGCTTGAAGAGCAACAAAGAGCTGAGAAAAGAACACGAGAGGCCAAGGGGGAGCAATTTACTCCAAGATGGTTTAACAGGACCGATGAAATCGCCCCTACACCCTGGGGCGAGCTGGAAGTGTATGAATACAATGGAAAATACACCGAGCACCGCGCTGCCATTGACAGCTCAAGTGTGGCCGACGACGATACAGACGTCACTTCGATCGAATTCAACCCGTGGCAGTACAGTAGCTCATCTTCCCAATGATTTTCGTANGGGTCTGAAACTGCACATCCGTATTTTTATTATCCAATATGCTTCCAGGCCTTGCTTTGCACG ] [+] EMBL CB679152 [ ACAACT TCAGGACACGCACTTCGCGCACAAAATAAACAGCTTCGATACGGCGCCGAAGAAGCTATTGGCATCGGACTCCCGATTGAGGCCTGATAGATATGCCCTCGAGAAGGGTGACATGTCAAAATCAGGTTCAGAAAAGAGCAGGCTTGAAGAGCAACAAAGAGCTGAGAAAAGAACACGAGAGGCCAAGGGGGAGCAATTTACTCCGAGATGGTTTAACAGGACCGATGAAATCGCCCCTACACCCTGGGGCGAGCTGGAAGTGTATGAATACAATGGAAAATACACCGAGCACCGCGCTGCCATTGACAGCTCAAGTGTGGCCGACGACGATACAGACGTCACTTCGATCGAATTCAACCCGTGGCAGTACAGTAGCTCATCTTCCCAATGATTTTCGTA GGGTCTGAAACTGCACATCCGTATTTTTATTATCCAATATGCTTCCAGGCCTTGCTTTGCACGCTGATTCATCTCAGCAGAGTTTTCGTGCCTTTGTAGTATTATGACCTTCACTTTTTCCCTTCTTCATGCTTCTACTGTTCAGGAAGTGATGGTGTATTCGATGTAGTCCATATACTGTCGTTGTTAATCTAGCGA ] [+] EMBL AU174957 [ AAATCAGGTTCAGAAAAGAGCAGGCTTGAAGAGCAACAAAGAGCTGAGAAAAGAACACGAGAGGCCAAGGGGGAGCAATTTACTCCAAGATGGTTTAACAGGACCGATGAAATCGCCCCTACACCCTGGGGCGAGCTGGAAGTGTATGAATACAATGGAAAATACACCGAGCACCGCGCTGCCATTGACAGCTCAAGTGTGGCCGACGACGATACAGACGTCACTTCGATCGAATTCAACCCGTGGCAGTACAGTAGCTCATCTTCCCAATGATTTTCGTA GGGTCTGAAACTGCACATCCGTATTTTTATTATCCAATATGCTTCCAGGCCTTGCTTTGCACGCTGATTCATCTCAGCAGAGTTTTCGTGCCTTTGTAGTATTATGACCTTCACTTTTTCCCTTCTTCATGCTTCTACTGTTCAGGAAGTGATGGTGTATTCGATGTAG ] [-] EMBL CA756158 [ CAACAAAGAGCTGAGAAAAGAACACGAGAGGCCAAGGGGGAGCAATTTACTCCAAGATGGTTTAACAGGACCGATGAAATCGCCCCTACACCCTGGGGCGAGCTGGAAGTGTATGAATACAATGGAAAATACACCGAGCACCGCGCTGCCATTGACAGCTCAAGTGTGGCCGACGACGATACAGACGTCACTTCGATCGAATTCAACCCGTGGCAGTACAGTAGCTCATCTTCCCAATGATTTTCGTA GGGTCTGAAACTGCACATCCGTATTTTTATTATCCAATATGCTTCCAGGCCTTGCTTTGCACGCTGATTCATCTCAGCAGAGTTTTCGTGCCTTTGTAGTATTATGACCTTCACTTTTTCCCTTCTTCATGCTTTTACTGTTCAGGAAGTGATGGTGTATTCGATGTAGTCCATATACTGTCGTTGTTAATCTAGCGAAAATTCCACCAAAAAAAAAAAAAAAAAAAA ] [+] EMBL AU174958 [ CGATGAAATCGCCCCTACACCCTGGGGCGAGCTGGAAGTGTATGAATACAATGGAAAATACACCGAGCACCGCGCTGCCATTGACAGCTCAAGTGTGGCCGACGACGATACAGACGTCACTTCGATCGAATTCAACCCGTGGCAGTACAGTAGCTCATCTTCCCAATGATTTTCGTA GGGTCTGAAACTGCACATCCGTATTTTTATTATCCAATATGCTTCCAGGCCTTGCTTTGCACGCTGATTCATCTCAGCAGAGTTTTCGTGCCTTTGTAGTATTATGACCTTCACTTTTTCCCTTCTTCATGCTTCTACTGTTCAGGAAGTGATGGTGTATTCGATGTAGTCCATATACTGTCGTTGTTAATCTAGCGAAAATTACAACAAAAAAAAAA ] [+] EMBL CF321893 [ CCTTTGTAGTATTATGACCTTCACTTTTTCCCTTCTTCATGCTTCTACTGTTCAGGAAGTGATGGTGTATTCGATGTAGTCCATATACTGTCGTTGTTAATCTAGCGAAAATTACAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTTTAAAAAAAAAAACCACTGTCTTGCCGTTACGTACCGTAT] consensusID : consensus_14052#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 563 fasta sequence [GTAATAGATCACTATAGGGAATGGTACCGGCCCCCTCCGATTGAGNCTGATAGATATGCCTCGAGAAGGTGACATGTCAAATCAGGTCAGAAGAGCAGGCTGAGAGCACAAGAGCTGAGAAGACACGAGAGGCCAAGGGGAGCAATTACTCCAAGATGGTTTAACAGGACCGATGAAATCGCCCCTACACCCTGGGGCGAGCTGGAAGTGTATGAATACAATGGAAAATACACCGAGCACCGCGCTGCCATTGACAGCTCAAGTGTGGCCGACGACGATACAGACGTCACTTCGATCGAATTCAACCCGTGGCAGTACAGTAGCTCATCTTCCCAATGATTTTCGTAGGGTCTGAAACTGCACATCCGTATTTTTATTATCCAATATGCTTCCAGGCCTTGCTTTGCACGCTGATTCATCTCAGCAGAGTTTTCGTGCCTTTGTAGTATTATGACCTTCACTTTTTCCCTTCTTCATGCTTCTACTGTTCTAGGAAGTGAGGGNGTATTCGATGTAGTCCATATACTGTCGTTGTTGATCNNGCGNAAATTACNAANCCANNA] [-] EMBL AA752939 [GTAATAGATCACTATAGGGAATGGTACCGGCCCCCTCCGATTGAGNCTGATAGATATGCCTCGAGAAGGTGACATGTCAAATCAGGTCAGAAGAGCAGGCTGAGAGCACAAGAGCTGAGAAGACACGAGAGGCCAAGGGGAGCAATTACTCCAAGATGGTTTAACAGGACCGATGAAATCGCCCCTACACCCTGGGGCGAGCTGGAAGTGTATGAATACAATGGAAAATACACCGAGCACCGCGCTGCCATTGACAGCTCAAGTGTGGCCGACGACGATACAGACGTCACTTCGATCGAATTCAACCCGTGGCAGTACAGTAGCTCATCTTCCCAATGATTTTCGTAGGGTCTGAAACTGCACATCCGTATTTTTATTATCCAATATGCTTCCAGGCCTTGCTTTGCACGCTGATTCATCTCAGCAGAGTTTTCGTGCCTTTGTAGTATTATGACCTTCACTTTTTCCCTTCTTCATGCTTCTACTGTTCTAGGAAGTGAGGGNGTATTCG ] [-] EMBL OSS2072A [ TTTTATTATCCAATATGCTTCCAGGCCTTGCTTTGCACGCTGATTCATCTCAGCAGAGTTTTCGTGCCTTTGTAGTATTATGACCTTCACTTTTTCCCTTCTTCATGCTTCTACTGTTC AGGAAGTGATGGTGTATTCGATGTAGTCCATATACTGTCGTTGTTGATCNNGCGNAAATTACNAANCCANNA] consensusID : consensus_14052#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 201 fasta sequence [GATTGAGGCCTGATAGATATGCCCTCCACAAGGGTGACATGTCATTATCTCGTTCAGAATACAGCTGGCTTGGAGAGCAACTAGAGCTGAGAAAAGAACACTAGAGGCCAAGGGGGATCAATTTACTCCCAGATGGTTTAACAGGACCGATGAAATCGCCCCTACACCCTGAGGCGAGCTGGAAGTGTATGAATACAATGG] [+] EMBL CA998055 [GATTGAGGCCTGATAGATATGCCCTCCACAAGGGTGACATGTCATTATCTCGTTCAGAATACAGCTGGCTTGGAGAGCAACTAGAGCTGAGAAAAGAACACTAGAGGCCAAGGGGGATCAATTTACTCCCAGATGGTTTAACAGGACCGATGAAATCGCCCCTACACCCTGAGGCGAGCTGGAAGTGTATGAATACAATGG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14052#0 TCGCCTTGCTTGATTTGCCTCGCCTGCCCTTTTTCTCGCGCGGCCGCCTCCGAGATTTCT 60 consensus_14052#1 ------------------------------------------------------------ consensus_14052#2 ------------------------------------------------------------ consensus_14052#0 CCTCCTCCTCCTCCTCCTCGACTCGACTCGACTCACCCCCCACTGAAATCTTCCTCCCAC 120 consensus_14052#1 ------------------------------------------------------------ consensus_14052#2 ------------------------------------------------------------ consensus_14052#0 CACCGCGCCGCGACGTCGCACGCCCCCGCGGCCGCCGCCGACGTCGCTGTACCCCCAAAC 180 consensus_14052#1 ------------------------------------------------------------ consensus_14052#2 ------------------------------------------------------------ consensus_14052#0 CCTAGCCCCGCTAGCGGGAGCGGTCGAGCACACACGCACGCGCGCGCGCGCGCGCGGAGT 240 consensus_14052#1 ------------------------------------------------------------ consensus_14052#2 ------------------------------------------------------------ consensus_14052#0 TCTCTCTCTCTCCTGTTGACCACCTGCAGATCGCCCGCGCGATGGGATCCAAGGACGGGA 300 consensus_14052#1 ------------------------------------------------------------ consensus_14052#2 ------------------------------------------------------------ consensus_14052#0 GTGGAGCCGCCTCGTCGGGAGGCGGCGGGGGCTTCTTCTCCTCGATCGCCGCCGGCGTGC 360 consensus_14052#1 ------------------------------------------------------------ consensus_14052#2 ------------------------------------------------------------ consensus_14052#0 GCAGCTTGGGCACCGCCGTCCACAAATCTGTCAACGGGTTGGTCGGCTATGAAGGACTTG 420 consensus_14052#1 ------------------------------------------------------------ consensus_14052#2 ------------------------------------------------------------ consensus_14052#0 AAGTTATTAACCCAGATGGAGGCACAGAAGATGCGGAAGCTGAGGCTTTGAGAGGGCGAT 480 consensus_14052#1 ------------------------------------------------------------ consensus_14052#2 ------------------------------------------------------------ consensus_14052#0 GGAAACAAGAGGATCGTGATAGTTATTGGAAGATGATGCACAAGTACATAGGGGCAGATG 540 consensus_14052#1 ------------------------------------------------------------ consensus_14052#2 ------------------------------------------------------------ consensus_14052#0 TTACATCACTTGTGACACTTCCGGTCATCATTTTTGAGCCAATGACAATGCTTCAGAAAA 600 consensus_14052#1 ------------------------------------------------------------ consensus_14052#2 ------------------------------------------------------------ consensus_14052#0 TGGCAGAGTTGATGGAATACTGTGAACTTTTAGACAAAGCAGATGAATGCGAAGACCCGT 660 consensus_14052#1 ------------------------------------------------------------ consensus_14052#2 ------------------------------------------------------------ consensus_14052#0 ACATGCGTATGGCATATGCCTCTGCATGGGCTGTATCGGTCTACTTTGCATACCAGCGTA 720 consensus_14052#1 ------------------------------------------------------------ consensus_14052#2 ------------------------------------------------------------ consensus_14052#0 CCTGGAAGCCTTTCAATCCCATCCTTGGGGAGACATATGAGATGGTTAACCACCAGGGTA 780 consensus_14052#1 ------------------------------------------------------------ consensus_14052#2 ------------------------------------------------------------ consensus_14052#0 TTTCATTTATTGCTGAGCAGGTAAGCCATCATCCTCCGATGGGTGCCGCTCACTGTGAAA 840 consensus_14052#1 ------------------------------------------------------------ consensus_14052#2 ------------------------------------------------------------ consensus_14052#0 ATGCACATTTTACATATGACATCACCTCCAAGTTGAAGACCAAATTCTTGGGGAACTCTC 900 consensus_14052#1 ------------------------------------------------------------ consensus_14052#2 ------------------------------------------------------------ consensus_14052#0 TGGAAGTTTATCCACTTGGAAGGACTAGAGTGTCACTTAAGAAGTCCGGTGTCAAGCTGG 960 consensus_14052#1 ------------------------------------------------------------ consensus_14052#2 ------------------------------------------------------------ consensus_14052#0 AATTGGTACCACCACTCACGAAGGTCAACAACTTGATATTTGGGCGTACTTGGGTTGATT 1020 consensus_14052#1 ------------------------------------------------------------ consensus_14052#2 ------------------------------------------------------------ consensus_14052#0 CTCCTGGAGAGATGGTATTGACAAACCTGACAACTGGAGACAAAGTTGTGCTTTTATTCC 1080 consensus_14052#1 ------------------------------------------------------------ consensus_14052#2 ------------------------------------------------------------ consensus_14052#0 AGCCATGTGGCTGGTTTGGGGCTGGTCGGTACGAGGTGGATGGCTATGTGTATAGTGCAG 1140 consensus_14052#1 ------------------------------------------------------------ consensus_14052#2 ------------------------------------------------------------ consensus_14052#0 CTGAAGAACCCAAAATAATGATAACTGGAAAGTGGAACCAGTCCATGAGTTGTCAGCCAT 1200 consensus_14052#1 ------------------------------------------------------------ consensus_14052#2 ------------------------------------------------------------ consensus_14052#0 GCGATCAAGAAGGCGATCCTCTTCCAGGAACTGAGCTAAAGGAGATATGGAGAGTTGCTC 1260 consensus_14052#1 ------------------------------------------------------------ consensus_14052#2 ------------------------------------------------------------ consensus_14052#0 CTACTCCACCAAATGACAAGTACCAGTACACGCACTTCGCGCACAAAATAAACAGCTTCG 1320 consensus_14052#1 ---------------------------------------------------------GTA 3 consensus_14052#2 ------------------------------------------------------------ consensus_14052#0 ATACGGCGCCGAAGAAGCTATTGGCATCGGACTCC--CGATTGAGGCCTGATAGATATGC 1378 consensus_14052#1 ATAGATCACTATAGGG---AATGGTACCGGCCCCCTCCGATTGAGNC-TGATAGATATGC 59 consensus_14052#2 --------------------------------------GATTGAGGCCTGATAGATATGC 22 ******* * ************ consensus_14052#0 CCTCGAGAAGGGTGACATGTCAAAATCAGGTTCAGAAAAGAGCAGGCTTGAAGAGCAACA 1438 consensus_14052#1 C-TCGAGAAGG-TGACATGTCAAA-TCAGGTC---AGAAGAGCAGGCT--GAGAGCAC-- 109 consensus_14052#2 CCTCCACAAGGGTGACATGTCATTATCTCGTTCAGAATACAGCTGGCTTGGAGAGCAAC- 81 * ** * **** ********** ** ** * * *** **** ****** consensus_14052#0 AAGAGCTGAGAAAAGAACACGAGAGGCCAAGGGGGAGCAATTTACTCCAAGATGGTTTAA 1498 consensus_14052#1 AAGAGCTGAGAAGA---CACGAGAGGCCAAGGGG-AGCAATT-ACTCCAAGATGGTTTAA 164 consensus_14052#2 TAGAGCTGAGAAAAGAACACTAGAGGCCAAGGGGGATCAATTTACTCCCAGATGGTTTAA 141 *********** * *** ************* * ***** ***** *********** consensus_14052#0 CAGGACCGATGAAATCGCCCCTACACCCTGGGGCGAGCTGGAAGTGTATGAATACAATGG 1558 consensus_14052#1 CAGGACCGATGAAATCGCCCCTACACCCTGGGGCGAGCTGGAAGTGTATGAATACAATGG 224 consensus_14052#2 CAGGACCGATGAAATCGCCCCTACACCCTGAGGCGAGCTGGAAGTGTATGAATACAATGG 201 ****************************** ***************************** consensus_14052#0 AAAATACACCGAGCACCGCGCTGCCATTGACAGCTCAAGTGTGGCCGACGACGATACAGA 1618 consensus_14052#1 AAAATACACCGAGCACCGCGCTGCCATTGACAGCTCAAGTGTGGCCGACGACGATACAGA 284 consensus_14052#2 ------------------------------------------------------------ consensus_14052#0 CGTCACTTCGATCGAATTCAACCCGTGGCAGTACAGTAGCTCATCTTCCCAATGATTTTC 1678 consensus_14052#1 CGTCACTTCGATCGAATTCAACCCGTGGCAGTACAGTAGCTCATCTTCCCAATGATTTTC 344 consensus_14052#2 ------------------------------------------------------------ consensus_14052#0 GTAGGGTCTGAAACTGCACATCCGTATTTTTATTATCCAATATGCTTCCAGGCCTTGCTT 1738 consensus_14052#1 GTAGGGTCTGAAACTGCACATCCGTATTTTTATTATCCAATATGCTTCCAGGCCTTGCTT 404 consensus_14052#2 ------------------------------------------------------------ consensus_14052#0 TGCACGCTGATTCATCTCAGCAGAGTTTTCGTGCCTTTGTAGTATTATGACCTTCACTTT 1798 consensus_14052#1 TGCACGCTGATTCATCTCAGCAGAGTTTTCGTGCCTTTGTAGTATTATGACCTTCACTTT 464 consensus_14052#2 ------------------------------------------------------------ consensus_14052#0 TTCCCTTCTTCATGCTTCTACTGTTC-AGGAAGTGATGGTGTATTCGATGTAGTCCATAT 1857 consensus_14052#1 TTCCCTTCTTCATGCTTCTACTGTTCTAGGAAGTGAGGGNGTATTCGATGTAGTCCATAT 524 consensus_14052#2 ------------------------------------------------------------ consensus_14052#0 ACTGTCGTTGTTAATCTAGCGAAAATTACAACAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1917 consensus_14052#1 ACTGTCGTTGTTGATCNNGCGNAAATTACNAANCCANNA--------------------- 563 consensus_14052#2 ------------------------------------------------------------ consensus_14052#0 AAATTTTAAAAAAAAAAACCACTGTCTTGCCGTTACGTACCGTAT 1962 consensus_14052#1 --------------------------------------------- consensus_14052#2 --------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||