These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14156#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1246 fasta sequence [CAAAACCCACGCCGCCGCCGCCGTCTCTTCCCTCCCTTCTCCGCCGCAGCCGCCGTATCCCCCCTCTCTCTCCGGGAGCTGAAAGCGCCCGAGGAGGAGATCAGGTTCTTTGGCCATGGTGGGCTGGCGGGCGGCGGGCGGCGCTCGTGCCGTTCTTCGCCGGCTCAGCGCGGCGGCGGAGGCGGCGGCGAAGCAG-GACGGCCGTGTGTTCGCTGCCAGCTATAGCGGCAGCAGTGGCGGCGTGAATGCTCCGTTTGGCTTGGGCCAATATGCAAACCTTTTGAGGGCACAAGCTTTTGCATCCAGGGGAGTCGCGCTGAACTTCCATCAGCTGATCCGCAATGCTGGAATATCTACCACAAGGAACCTGCTTGCTGCAGATGATGCTATGGTTCCTGTTTCTTCTCCTTTGACACCTCCACTTGGTGATGGAGAACAAACTGACAAAAAGGGAGCAATTGTTAAGCGGCTGAAGGTCCAAGCCATCAAGAAGGATATCAAGCAGAGCCCCAAGAAGGTGAATCTGGTAGCAAAGCTGGTTCGAGGAATGCGTGTGGAAGATGCCCTGTTGCAGTTGCAAGTGACAGTTAAAAGGGCTGCAAAAACTGTATATCAGGTGATTCATTCTGCTCGTGCCAATGCAGCTCACAATCACGGACTGGATCCTGATAAACTTATTGTGGAAGAGGCTTTTGTTGGGAAAGGACTTTACCTGAAGAGGTTGTCCTACCATGCCAAAGGGCGGTGTGGCGTCATGGTGAGACCGAGGTGCAGACTGACAGTAGTGGTTCGAGAGGCTACCGCTGAGGAAGAGGCAAAGATCGCGAAACTCAGAGTCAGCAACTATAAGAAGCTGACCAGAAAGGAGAAGCAGCTAATGCCGCACCGTCTTATCGAGGTTAGCCCGAGGTGGGCTCGCAAGAGGAAAGAGGAGGCTGGTGCTGCTGCGTAGCATG-GCTTCCCATTTGCAGGATGTCTGCCTTCATTGGCCTTGAAGCGGTGAGTAGCCGCATATGCTGAAATTTACCCAAGAACAATTGTAGCTCTCTCAAGAATGAATTCAAAGGTC-TCATTTGTCAGGCCTGTCTTTGTTCTGTTTGTTTCATCTGTATGAAATTTGTC-TCATGAAGCATAGGAAACTGTGGCATTGCCCACGATTCTACTCAGAATGAATAATGTCACCTCTGATATTTTGTTCGGCCTGCCTATTTTTATAGTTGTCTTCGCTGAAGATCCGTATTCAAAG] [+] EMBL AK073157 [CAAAACCCACGCCGCCGCCGCCGTCTCTTCCCTCCCTTCTCCGCCGCAGCCGCCGTATCCCCCCTCTCTCTCCGGGAGCTGAAAGCGCCCGAGGAGGAGATCAGGTTCTTTGGCCATGGTGGGCTGGCGGGCGGCGGGCGGCGCTCGTGCCGTTCTTCGCCGGCTCAGCGCGGCGGCGGAGGCGGCGGCGAAGCAG GACGGCCGTGTGTTCGCTGCCAGCTATAGCGGCAGCAGTGGCGGCGTGAATGCTCCGTTTGGCTTGGGCCAATATGCAAACCTTTTGAGGGCACAAGCTTTTGCATCCAGGGGAGTCGCGCTGAACTTCCATCAGCTGATCCGCAATGCTGGAATATCTACCACAAGGAACCTGCTTGCTGCAGATGATGCTATGGTTCCTGTTTCTTCTCCTTTGACACCTCCACTTGGTGATGGAGAACAAACTGACAAAAAGGGAGCAATTGTTAAGCGGCTGAAGGTCCAAGCCATCAAGAAGGATATCAAGCAGAGCCCCAAGAAGGTGAATCTGGTAGCAAAGCTGGTTCGAGGAATGCGTGTGGAAGATGCCCTGTTGCAGTTGCAAGTGACAGTTAAAAGGGCTGCAAAAACTGTATATCAGGTGATTCATTCTGCTCGTGCCAATGCAGCTCACAATCACGGACTGGATCCTGATAAACTTATTGTGGAAGAGGCTTTTGTTGGGAAAGGACTTTACCTGAAGAGGTTGTCCTACCATGCCAAAGGGCGGTGTGGCGTCATGGTGAGACCGAGGTGCAGACTGACAGTAGTGGTTCGAGAGGCTACCGCTGAGGAAGAGGCAAAGATCGCGAAACTCAGAGTCAGCAACTATAAGAAGCTGACCAGAAAGGAGAAGCAGCTAATGCCGCACCGTCTTATCGAGGTTAGCCCGAGGTGGGCTCGCAAGAGGAAAGAGGAGGCTGGTGCTGCTGCGTAGCATG GCTTCCCATTTGCAGGATGTCTGCCTTCATTGGCCTTGAAGCGGTGAGTAGCCGCATATGCTGAAATTTACCCAAGAACAATTGTAGCTCTCTCAAGAATGAATTCAAAGGTC TCATTTGTCAGGCCTGTCTTTGTTCTGTTTGTTTCATCTGTATGAAATTTGTC TCATGAAGCATAGGAAACTGTGGCATTGCCCACGATTCTACTCAGAATGAATAAT ] [+] EMBL OSS2054A [ CCATGGTGGGCTGGCGGGCGGCGGGCGGCGCTCGTNCCGTTCTTCGCCGGCTCAGCGCGGCGGCGGAGGCGGCGGCGAA NAGCGACGGCCGTGTGTTCGCTGCCAGCTATAGCGGCANAGGTNGCGGCGTGAATTCTCCGTTTGGCTTGGGCCAATATGCAAACCTTTTGAGGGCACAAGCTTTTGCATCCAGGGGAGTCGCGCTGAACTTCCATCAGCTGATCCGCAATGCTGGAATATCTACCACAAGGAACCTGCTTGCTGCAGATGATGCTATGGTTCCTGTTTCTTCTCCTTTGAC ] [-] EMBL CB685713 [ ATTGTTAAGCGGCTGAAGGTCCAAGCCATCAAGAAGGATATCAAGCAGAGCCCCAAGAAGGTGAATCTGGTAGCAAAGCTGGTTCGAGGAATGCGTGTGGAAGATGCCCTGTTGCAGTTGCAAGTGACAGTTAAAAGGGCTGCAAAAACTGTATATCAGGTGATTCATTCTGCTCGTGCCAATGCAGCTCACAATCACGGACTGGATCCTGATAAACTTATTGTGGAAGAGGCTTTTGTTGGGAAAGGACTTTACCTGAAGAGGTTGTCCTACCATGCCAAAGGGCGGTGTGGCGTCATGGTGAGACCGAGGTGCAGACTGACAGTAGTGGTTCGAGAGGCTACCGCTGAGGAAGAGGCAAAGATCGCGAAACTCAGAGTCAGCAACTATAAGAAGCTGACCAGAAAGGAGAAGCAGCTAATGCCGCACCGTCTTATCGAGGTTAGCCCGAGGTGGGCTCGCAAGAGGAAAGAGGAGGCTGGTGCTGCTGCGTAGCATG GCTTCCCATTTGCAGGATGTCTGCCTTCATTGGCCTTGAAGCGGTGAGTAGCCGCATATGCTGAAATTTACCCAAGAACAATTGTAGCTCTCTCAAGAATGAATTCAAAGGTC TCATTTGTCAGGCCTGTCTTTGTTCTGTTTGTTTCATCTGTATGAAATTTGTC TCATGAAGCATAGGAAACTGTGGCATTGCCCACGATTCTACTCAGAATGAATAATGTCACCTCTGATATTTTGTTCGGCCTGCCTATTTTGATAGTTGTCTTCGCTGAAGATCCGTATTCAAAG] [+] EMBL CA765382 [ TCATTCTGCTCGTGCCAATGCAGCTCACAATCACGGACTGGATCCTGATAAACTTATTGTGGAAGAGGCTTTTGTTGGGAAAGGACTTTACCTGAAGAGGTTGTCCTACCATGCCAAAGGGCGGTGTGGCGTCATGGTGAGACCGAGGTGCAGACTGACAGTAGTGGTTCGAGAGGCTACCGCTGAGGAAGAGGCAAAGATCGCGAAACTCAGAGTCAGCAACTATAAGAAGCTGACCAGAAAGGAGAAGCAGCTAATGCCGCACCGTCTTATCGAGGTTAGCCCGAGGTGGGCTCGCAAGAGGAAAGAGGAGGCTGGTGCTGCTGCGTAGCATG GCTTCCCATTTGCAGGATGTCTGCCTTCATTGGCCTTGAAGCGGTGAGTAGCCGCATATACTGAAATTTACCCAAGAACAATTGTAGCTCTCTCAAGAATGAATTCAAAGGTC TCATTTGTCAGGCCTGTCTTTGTTCTGTTTGTTTCATCTGTATGAAATTTGTC TCATGAAGCATAGAAAACTGTGGCATTGCCCACGATTCTACTCAGAATGAATAATGTCACCTCTGATGTTTTGTTCGGCCTGCCTATTTTTATAGNTGTCTTC ] [+] EMBL OSC20641 [ CGTGCCAATGCAGCTCACAATCACGGACTGGATCCTGATAAACTTATTGTGGAAGAGGCTTTTGTTGGGAAAGGACTTTACCTGAAGAGGTTGTCCTACCATGCCAAAGGGCGGTGTGGCGTCATGGTGAGACCGAGGTGCAGACTGACAGTAGTGGTTCGAGAGGCTACCGCTGAGGAAGAGGCAAAGATCGCGAAACTCAGAGTCAGCAACTATAAGAAGCTGACCAGAAAGGAGAAGCAGCTAATGCCGCACCGTCTTATCGAGGTTAGCCCGAGGTGGGCTCGCAAGANGAAAGAGGAGGCTGGTNCTGCTGCGTAG ATGNGCTTCCCATTTGCAGGA ] [+] EMBL BI799786 [ CTTATTGTGGAAGAGGCTTTTGTTGGGAAAGGACTTTACCTGAAGAGGTTGTCCTACCATGCCAAAGGGCGGTGTGGCGTCATGGTGAGACCGAGGTGCAGACTGACAGTAGTGGTTCGAGAGGCTACCGCTGAGGAAGAGGCAAAGATCGCGAAACTCAGAGTCAGCAACTATAAGAAGCTGACCAGAAAGGAGAAGCAGCTAATGCCGCACCGTCTTATCGAGGTTAGCCCGAGGTGGGCTCGCAAGAGGAAAGAGGAGGCTGGTGCTGCTGCGTAGCATG GCTTCCCATTTGCAGGATGTCTGCCTTCATTGGCCTTGAAGCGGTGAGTAGCCGCATATACTGAAATTTACCCAAGAACAATTGTAGCTCTCTCAAGAATGAATTCAAAGGTC TCATTTGTCAGGCCTGTCTTTGTTCTGTTTGTTTCATCTGTATGAAATTTGTC TCATGAAGCATAGAAAACTGTGCCATTGCCCACGATTCTACTCAGAAaaa ] [+] EMBL CB683856 [ AATGCCGCACCGTCTTATCGAGGTTAGCCCGAGGTGGGCTCGCAAGAGGAAAGAGGAGGCTGGTGCTGCTGCGTAGCATG GCTTCCCATTTGCAGGATGTCTGCCTTCATTGGCCTTGAAGCGGTGAGTAGCCGCATATGCTGAAATTTACCCAAGAACAATTGTAGCTCTCTCAAGAATGAATTCAAAGGTC TCATTTGTCAGGCCTGTCTTTGTTCTGTTTGTTTCATCTGTATGAAATTTGTC TCATGAAGCATAGGAAACTGTGGCATTGCCCACGATTCTACTCAGAATGAATAATGTCACCTCTGATATTTTGT ] [-] EMBL AU225487 [ TGGGCTCGCAAGAGGAAAGAGGAGGCTGGTGCTGCTGCGTAGCATG GCTTCCCATTTGCAGGATGTCTGCCTTCATTGGCCTTGAAGCGGTGAGTAGCCGCATATGCTGAAATTTACCCAAGAACAATTGTAGCTCTCTCAAGAATGAATTCAAAGGTCTTCATTTGTCAGGCCTGTCTTTGTTCTGTTTGTTTCATCTGTATGAAATTTGTCTTCATGAAGCATAGGAAACTGTGGCATTGCCCACGATTCTACTCAGAATGAATAATGTCACCTCTGATATTTTGTTCGGCCTGCCTATTTTTATAGTTGagcggc ] consensusID : consensus_14156#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 853 fasta sequence [CACTAAGGGAATACTTGGCTCCGCAGCCG-CGTATCCCCCTCTCTCTCCGGGAGCTGAAAGCGCCCGAGGAGGAGATCAGGTTCTTTGGCCATGGTGGGCTGGAGGGCGGCGGGCGGCGCTCGTGCCGTTCTTCGCCGGCTCAGCGCGGCGGCGGAGGCGGCGGCGAAGCAGGACGGCCGTGTGTTCGCTGCCAGCTATAGCGGCAGCAGTGGCGGCGTGAATGCTCCGTTTGGCTTGGGCCAATATGCAAACCTTTTGAGGGCACAAGCTTTTGCATCCANGGGAGTCGCGCTGAACTTCCATCAGCTGATCCGCAATGCTGGAATATCTACCACAAGGAACCTGCTTGCTGCAGATGATGCTATGGTTCCTGTTTCTTCTCCTTTGACACCTCCACTTGGTGATGGAGAACAAACTGACAAAAAGGGAGCAATTGTTAAGCGGCTGAAGGTCCAAGCCATCAAGAAGGATATCAAGCAGAGCCCCAAGAAGGTGAATCTGGTAGCAAAGCTGGTTCGAGGAATGCGTGTGGAAGATGCCCTGTTGCAGTTGCAAGTGACAGTTAAAAGGGCTGCAAAAACTGTATATCAGGTGATTCATTCTGCTCGTGCCAATGCAGCTCACAATCACGGACTGGATCCTGATAAACTTATTGTGGAAGAGGCTTTTGTTGGGAAAGGACTTTACCTGAAGAGGTTGTCCTACCATGCCAAAGGGCGGTGTGGCGTCATGGTGAGACCGAGGTGCAGACTGACAGTAGTGGTTCGAGA-GGTTACCCGCTGAGGAAGAGGCAAAGATCGCGAAACTCAGAGTCGCAACTAATAAAAACTGACACAAAGGGAAGCGCTATTGC] [+] EMBL CB964865 [CACTAAGGGAATACTTGGCTCCGCAGCCG CGTATCCCCCTCTCTCTCCGGGAGCTGAAAGCGCCCGAGGAGGAGATCAGGTTCTTTGGCCATGGTGGGCTGGAGGGCGGCGGGCGGCGCTCGTGCCGTTCTTCGCCGGCTCAGCGCGGCGGCGGAGGCGGCGGCGAAGCAGGACGGCCGTGTGTTCGCTGCCAGCTATAGCGGCAGCAGTGGCGGCGTGAATGCTCCGTTTGGCTTGGGCCAATATGCAAACCTTTTGAGGGCACAAGCTTTTGCATCCANGGGAGTCGCGCTGAACTTCCATCAGCTGATCCGCAATGCTGGAATATCTACCACAAGGAACCTGCTTGCTGCAGATGATGCTATGGTTCCTGTTTCTTCTCCTTTGACACCTCCACTTGGTGATGGAGAACAAACTGACAAAAAGGGAGCAATTGTTAAGCGGCTGAAGGTCCAAGCCATCAAGAAGGATATCAAGCAGAGCCCCAAGAAGGTGAATCTGGTAGCAAAGCTGGTTCGAGGAATGCGTGTGGAAGATGCCCTGTTGCAGTTGCAAGTGACAGTTAAAAGGGCTGCAAAAACTGTATATCAGGTGATTCATTCTGCTCGTGCCAATGCAGCTCACAATCACGGACTGGATCCTGATAAACTTATTGTGGAAGAGGCTTTTGTTGGGAAAGGACTTTACCTGAAGAGGTTGTCCTACCATGCCAAAGGGCGGTGTGGCGTCATGGTGAGAACGAGGTGCAGACTGACAGTAGTGGTTCGAGA GGTTAC ] [+] EMBL CB966166 [ GAATAACTGGCTCCGCAGCCGCCGTATCCCCCTCTCTCTCCGGGAGCTGAAAGCGCCCGAGGAGGAGATCAGGTTCTTTGGCCATGGTGGGCTGGAGGGCGGCGGGCGGCGCTCGTGCCGTTCTTCGCCGGCTCAGCGCGGCGGCGGAGGCGGCGGCGAAGCAGGACGGCCGTGTGTTCGCTGCCAGCTATAGCGGCAGCAGTGGCGGCGTGAATGCTCCGTTTGGCTTGGGCCAATATGCAAACCTTTTGAGGGCACAAGCTTTTGCATCCAGGGGAGTCGCGCTGAACTTCCATCAGCTGATCCGCAATGCTGGAATATCTACCACAAGGAACCTGCTTGCTGCAGATGATGCTATGGTTCCTGTTTCTTCTCCTTTGACACCTCCACTTGGTGATGGAGAACAAACTGACAAAAAGGGAGCAATTGTTAAGCGGCTGAAGGTCCAAGCCATCAAGAAGGATATCAAGCAGAGCCCCAAGAAGGTGAATCTGGTAGCAAAGCTGGTTCGAGGAATGCGTGTGGAAGATGCCCTGTTGCAGTTGCAAGTGACAGTTAAAAGGGCTGCAAAAACTGTATATCAGGTGATTCATTCTGCTCGTGCCAATGCAGCTCACAATCACGGACTGGATCCTGATAAACTTATTGTGGAAGAGGCTTTTGTTGGGAAAGGACTTTACCTGAAGAGGTTGTCCTACCATGCCAAAGGGCGGTGTGGCGTCATGGTGAGACCGAGGTGCAGACTGACAGTAGTGGTTCGAGAGGGCTA CCGCTGAGGAAGAGGCAAAGATCGCGAAACTCAGAGTCGCAACTAATAAAAACTGACACAAAGGGAAGCGCTATTGC] [+] EMBL CB685712 [ ACCCCAAGGAATCTGCTTGCTGTAGATGATGCTATGGTTCCTGGTTCTTCTCCTTTGACACCTCCACTTGGTGATGGAGAACAAACTGACAAAAAGGGAGCAATTGTTAAGCGGCTGAAGGTCCAAGCCATCAAGAAGGATATCAAGCAGAGCCCCAAGAAGGTGAATCTGGTAGCAAAGCTGGTTCGAGGAATGCGTGTGGAAGATGCCCTGTTGCAGTTGCAAGTGACAGTTAAAAGGGCTGCAAAAACTGTATATCAGGTGATTCATTCTGCTCGTGCCAATGCAGCTCACAATCACGGACTGGATCCTGATAAACTTATTGTGGAAGAGGCTTTTGTTGGGAAAGGACTTTACCTGAAGAGGTTGTCCTACCATGCCAAAGGGCGGTGTGGCGTCATGGTGAGACCGAGGTGCAGACTGACAGTAGTGGCTC ] consensusID : consensus_14156#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 535 fasta sequence [GTCCAAGCCATCAAGAAGGATATCAAGCAGAGCCCCAAGAAGGTGAATCTGGTAGCAAAGTTGGTTCGAGGAATGCGTGTGGAAGATGCCCTGTTGCAGTTGCAAGTGACAGTTAAAAGGGCTGCAAAAACTGTATATCAGGTTCTGTAGTTAACAAAATTTTGTCCTGCAACTGCTCCTTGTGGTAGATAGGGTCAGGTGTGACCAATATTTTTCATGATCATTCCTTTCTATCAATCACTGCAGGTGATTCATTCTGCTCGTGCCAATGCAGCTCACAATCACGGACTGGATCCTGATAAACTTATTGTGGAAGAGGCTTTTGTTGGGAAAGGACTTTACCTGAAGAGGTTGTCCTACCATGCCAAAGGGCGGTGTGGCGTCATGGTGAGACCGAGGTGCAGACTGACAGTAGTGGTTCGAGAGGCTACCGCTGAGGAAGAGGCAAAGATCGCGAAACTCAGAGTCAGCAACTATAAGAAGCTGACCAGAAAGGAGAAGCAGCTAATGCCGCACCGTCTTATCGAGGTTAGCC] [+] EMBL CA997854 [GTCCAAGCCATCAAGAAGGATATCAAGCAGAGCCCCAAGAAGGTGAATCTGGTAGCAAAGTTGGTTCGAGGAATGCGTGTGGAAGATGCCCTGTTGCAGTTGCAAGTGACAGTTAAAAGGGCTGCAAAAACTGTATATCAGGTTCTGTAGTTAACAAAATTTTGTCCTGCAACTGCTCCTTGTGGTAGATAGGGTCAGGTGTGACCAATATTTTTCATGATCATTCCTTTCTATCAATCACTGCAGGTGATTCATTCTGCTCGTGCCAATGCAGCTCACAATCACGGACTGGATCCTGATAAACTTATTGTGGAAGAGGCTTTTGTTGGGAAAGGACTTTACCTGAAGAGGTTGTCCTACCATGCCAAAGGGCGGTGTGGCGTCATGGTGAGACCGAGGTGCAGACTGACAGTAGTGGTTCGAGAGGCTACCGCTGAGGAAGAGGCAAAGATCGCGAAACTCAGAGTCAGCAACTATAAGAAGCTGACCAGAAAGGAGAAGCAGCTAATGCCGCACCGTCTTATCGAGGTTAGCC] consensusID : consensus_14156#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 367 fasta sequence [CCGCACCGTCTTATCGAGGTTAGCCCGAGGTGGGCTCGCAAGAGGAAAGAGGAGGCTGGTGCTGCTGCGTAGCATGGCTTCCCATTTGCAGGATGTCTGCCTTCATTGGCCTTGAAGCGGTGAGTAGCCGCATATGCTGAAATTTACCCAAGAACAATTGTAGCTCCCTCAAGAATGAATTCAAAGGTCTCATTTGTCAGGCCTGTCTTTGTTCTGTTTGTTTCATCTGTATGAAATTTGTCTCATGAAGCATAGGAAACTGTGGCATTGCCCACGATTCTACTCAGAATGAATAATGTCACCTCTGATATTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL CF331131 [CCGCACCGTCTTATCGAGGTTAGCCCGAGGTGGGCTCGCAAGAGGAAAGAGGAGGCTGGTGCTGCTGCGTAGCATGGCTTCCCATTTGCAGGATGTCTGCCTTCATTGGCCTTGAAGCGGTGAGTAGCCGCATATGCTGAAATTTACCCAAGAACAATTGTAGCTCCCTCAAGAATGAATTCAAAGGTCTCATTTGTCAGGCCTGTCTTTGTTCTGTTTGTTTCATCTGTATGAAATTTGTCTCATGAAGCATAGGAAACTGTGGCATTGCCCACGATTCTACTCAGAATGAATAATGTCACCTCTGATATTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] consensusID : consensus_14156#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 167 fasta sequence [AAAGGTCTCATTTGTCAGGCCTGTCTTTGTTCTGTTTGTTTCATCTGTATGAAATTTGTCTCATGAAGCATAGGAAACTGTGGCATTGCCCACGATTCTACTCAGAATGAATAATGTCACCTCTAAAAAAAAAAAAAAAAAAAAAAAACAAAGTCATGCCGTTACGT] [+] EMBL CF332099 [AAAGGTCTCATTTGTCAGGCCTGTCTTTGTTCTGTTTGTTTCATCTGTATGAAATTTGTCTCATGAAGCATAGGAAACTGTGGCATTGCCCACGATTCTACTCAGAATGAATAATGTCACCTCTAAAAAAAAAAA ] [-] EMBL CF332100 [ AAGGTCTCATTTGTCAGGCCTGTCTTTGTTCTGTTTGTTTCATCTGTATGAAATTTGTCTCATGAAGCATAGGAAACTGTGGCATTGCCCACGATTCTACTCAGAATGAATAATGTCACCTCTAAAAAAAAAAAAAAAAAAAAAAAACAAAGTCATGCCGTTACGT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14156#1 --------------------------CACTAAGGGAATACTTGGCTCCGCAGCCGCGTAT 34 consensus_14156#2 ------------------------------------------------------------ consensus_14156#0 CAAAACCCACGCCGCCGCCGCCGTCTCTTCCCTCCCTTCTCCGCCGCAGCCGCCGTAT-C 59 consensus_14156#3 ------------------------------------------------------------ consensus_14156#4 ------------------------------------------------------------ consensus_14156#1 CCCCCTCTCTCTCCGGGAGCTGAAAGCGCCCGAGGAGGAGATCAGGTTCTTTGGCCATGG 94 consensus_14156#2 ------------------------------------------------------------ consensus_14156#0 CCCCCTCTCTCTCCGGGAGCTGAAAGCGCCCGAGGAGGAGATCAGGTTCTTTGGCCATGG 119 consensus_14156#3 ------------------------------------------------------------ consensus_14156#4 ------------------------------------------------------------ consensus_14156#1 TGGGCTGGAGGGCGGCGGGCGGCGCTCGTGCCGTTCTTCGCCGGCTCAGCGCGGCGGCGG 154 consensus_14156#2 ------------------------------------------------------------ consensus_14156#0 TGGGCTGGCGGGCGGCGGGCGGCGCTCGTGCCGTTCTTCGCCGGCTCAGCGCGGCGGCGG 179 consensus_14156#3 ------------------------------------------------------------ consensus_14156#4 ------------------------------------------------------------ consensus_14156#1 AGGCGGCGGCGAAGCAGGACGGCCGTGTGTTCGCTGCCAGCTATAGCGGCAGCAGTGGCG 214 consensus_14156#2 ------------------------------------------------------------ consensus_14156#0 AGGCGGCGGCGAAGCAGGACGGCCGTGTGTTCGCTGCCAGCTATAGCGGCAGCAGTGGCG 239 consensus_14156#3 ------------------------------------------------------------ consensus_14156#4 ------------------------------------------------------------ consensus_14156#1 GCGTGAATGCTCCGTTTGGCTTGGGCCAATATGCAAACCTTTTGAGGGCACAAGCTTTTG 274 consensus_14156#2 ------------------------------------------------------------ consensus_14156#0 GCGTGAATGCTCCGTTTGGCTTGGGCCAATATGCAAACCTTTTGAGGGCACAAGCTTTTG 299 consensus_14156#3 ------------------------------------------------------------ consensus_14156#4 ------------------------------------------------------------ consensus_14156#1 CATCCANGGGAGTCGCGCTGAACTTCCATCAGCTGATCCGCAATGCTGGAATATCTACCA 334 consensus_14156#2 ------------------------------------------------------------ consensus_14156#0 CATCCAGGGGAGTCGCGCTGAACTTCCATCAGCTGATCCGCAATGCTGGAATATCTACCA 359 consensus_14156#3 ------------------------------------------------------------ consensus_14156#4 ------------------------------------------------------------ consensus_14156#1 CAAGGAACCTGCTTGCTGCAGATGATGCTATGGTTCCTGTTTCTTCTCCTTTGACACCTC 394 consensus_14156#2 --------------GTCCAAGCCATCAAGAAGGATATCAAGCAGAGCCCCAAGA-AGGTG 45 consensus_14156#0 CAAGGAACCTGCTTGCTGCAGATGATGCTATGGTTCCTGTTTCTTCTCCTTTGACACCTC 419 consensus_14156#3 ------------------------------------------------------------ consensus_14156#4 ------------------------------------------------------------ consensus_14156#1 CACTTGGTGATGGAGAACAAACTGACAAAAAGGGAGCAATTGTTAAGCGGCTGAAGGTCC 454 consensus_14156#2 AATCTGGTAGC--AAAGTTGGTTCGAGGAATGCGTGTGGAAGATGCCCTGTTGCAGTTGC 103 consensus_14156#0 CACTTGGTGATGGAGAACAAACTGACAAAAAGGGAGCAATTGTTAAGCGGCTGAAGGTCC 479 consensus_14156#3 ------------------------------------------------------------ consensus_14156#4 ------------------------------------------------------------ consensus_14156#1 AAGCCATCAAGAAGGATATCAAGCAGAGCCCCAAGAAGGTGAATCTGGTAGCAAAGCTGG 514 consensus_14156#2 AAGTGACAGTTAAAAGGGCTGCAAAAACTGTATATCAGGTTCTGTAGTTAACAAAATTTT 163 consensus_14156#0 AAGCCATCAAGAAGGATATCAAGCAGAGCCCCAAGAAGGTGAATCTGGTAGCAAAGCTGG 539 consensus_14156#3 -----CCGCACCGTCTTATCGAGGTTAGCCCGAGGTGGGCTCGCAAGAGGAAAGAGGAGG 55 consensus_14156#4 ------------------------------------------------------------ consensus_14156#1 TTCGAGGAA----TGCGTGTGGAAGAT--GCCCTGTTGCAGTTGCAAGTGACAGTTAAAA 568 consensus_14156#2 GTCCTGCAACTGCTCCTTGTGGTAGATAGGGTCAGGTGTGACCAATATTTTTCATGATCA 223 consensus_14156#0 TTCGAGGAA----TGCGTGTGGAAGAT--GCCCTGTTGCAGTTGCAAGTGACAGTTAAAA 593 consensus_14156#3 CTGGTGCTG---CTGCGTAGCATGGCTTCCCATTTGCAGGATGTCTGCCTTCATTGGCCT 112 consensus_14156#4 ------------------------------------------------------------ consensus_14156#1 GGGCTGCAAAAACTGTATATCAGGTGATTCATTCTGCTCGTGCCAATGCAGCTCACAATC 628 consensus_14156#2 TTCCTTTCTATCAATCACTGCAGGTGATTCATTCTGCTCGTGCCAATGCAGCTCACAATC 283 consensus_14156#0 GGGCTGCAAAAACTGTATATCAGGTGATTCATTCTGCTCGTGCCAATGCAGCTCACAATC 653 consensus_14156#3 TGAAGCGGTGAGTAGCCGCATATGCTGAAATTTACCCAAGAACAATTGTAGCTCCC---T 169 consensus_14156#4 ------------------------------------------------------------ consensus_14156#1 ACGGACTGGATCCTGATAAACTTATTGTGGAAGAGGCTTTTGTTGGGAAAGGACTTTACC 688 consensus_14156#2 ACGGACTGGATCCTGATAAACTTATTGTGGAAGAGGCTTTTGTTGGGAAAGGACTTTACC 343 consensus_14156#0 ACGGACTGGATCCTGATAAACTTATTGTGGAAGAGGCTTTTGTTGGGAAAGGACTTTACC 713 consensus_14156#3 CAAGAATGAATTCAAAGGTCTCATTTGTCAGGCCTGTCTTTGTTCTGTTTGTTTCATCTG 229 consensus_14156#4 -------------AAAGGTCTCATTTGTCAGGCCTGTCTTTGTTCTGTTTGTTTCATCTG 47 * **** * ****** * * * consensus_14156#1 TGAAGAGGTTGTCCTACCATGCCAAAGGGCGGTGTGGCGTCATGGTGAGACCGAGGTGCA 748 consensus_14156#2 TGAAGAGGTTGTCCTACCATGCCAAAGGGCGGTGTGGCGTCATGGTGAGACCGAGGTGCA 403 consensus_14156#0 TGAAGAGGTTGTCCTACCATGCCAAAGGGCGGTGTGGCGTCATGGTGAGACCGAGGTGCA 773 consensus_14156#3 TATGAAATTTGTCTCATGAAGC-ATAGGAAACTGTGGCATTGCC-CACGATTCTACTCAG 287 consensus_14156#4 TATGAAATTTGTCTCATGAAGC-ATAGGAAACTGTGGCATTGCC-CACGATTCTACTCAG 105 * * ***** * * ** * *** ****** * ** * consensus_14156#1 GACTGACAGTAGTGGTTCGAGAGGTTACCCGCTGAGGAAGAGGCAAAGATCGCGAAACTC 808 consensus_14156#2 GACTGACAGTAGTGGTTCGAGAGGCTACC-GCTGAGGAAGAGGCAAAGATCGCGAAACTC 462 consensus_14156#0 GACTGACAGTAGTGGTTCGAGAGGCTACC-GCTGAGGAAGAGGCAAAGATCGCGAAACTC 832 consensus_14156#3 AATGAATAATGTCACCTCTGATATTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 347 consensus_14156#4 AATGAATAATGTCACCTCTAA------AAAAAAAAAAAAAAAAAAAAAACAAAGTCATGC 159 * * * * ** * ** * *** * * consensus_14156#1 AGAGTC-GCAACTAATAAAAACTGAC--ACAAAGGGAAGC-GCTATTGC----------- 853 consensus_14156#2 AGAGTCAGCAACTATAAGAAGCTGACCAGAAAGGAGAAGCAGCTAATGCCGCACCGTCTT 522 consensus_14156#0 AGAGTCAGCAACTATAAGAAGCTGACCAGAAAGGAGAAGCAGCTAATGCCGCACCGTCTT 892 consensus_14156#3 AAAAAAAAAAAAAAAAAAAA---------------------------------------- 367 consensus_14156#4 CGTTACGT---------------------------------------------------- 167 consensus_14156#1 ------------------------------------------------------------ consensus_14156#2 ATCGAGGTTAGCC----------------------------------------------- 535 consensus_14156#0 ATCGAGGTTAGCCCGAGGTGGGCTCGCAAGAGGAAAGAGGAGGCTGGTGCTGCTGCGTAG 952 consensus_14156#3 ------------------------------------------------------------ consensus_14156#4 ------------------------------------------------------------ consensus_14156#1 ------------------------------------------------------------ consensus_14156#2 ------------------------------------------------------------ consensus_14156#0 CATGGCTTCCCATTTGCAGGATGTCTGCCTTCATTGGCCTTGAAGCGGTGAGTAGCCGCA 1012 consensus_14156#3 ------------------------------------------------------------ consensus_14156#4 ------------------------------------------------------------ consensus_14156#1 ------------------------------------------------------------ consensus_14156#2 ------------------------------------------------------------ consensus_14156#0 TATGCTGAAATTTACCCAAGAACAATTGTAGCTCTCTCAAGAATGAATTCAAAGGTCTCA 1072 consensus_14156#3 ------------------------------------------------------------ consensus_14156#4 ------------------------------------------------------------ consensus_14156#1 ------------------------------------------------------------ consensus_14156#2 ------------------------------------------------------------ consensus_14156#0 TTTGTCAGGCCTGTCTTTGTTCTGTTTGTTTCATCTGTATGAAATTTGTCTCATGAAGCA 1132 consensus_14156#3 ------------------------------------------------------------ consensus_14156#4 ------------------------------------------------------------ consensus_14156#1 ------------------------------------------------------------ consensus_14156#2 ------------------------------------------------------------ consensus_14156#0 TAGGAAACTGTGGCATTGCCCACGATTCTACTCAGAATGAATAATGTCACCTCTGATATT 1192 consensus_14156#3 ------------------------------------------------------------ consensus_14156#4 ------------------------------------------------------------ consensus_14156#1 ------------------------------------------------------ consensus_14156#2 ------------------------------------------------------ consensus_14156#0 TTGTTCGGCCTGCCTATTTTTATAGTTGTCTTCGCTGAAGATCCGTATTCAAAG 1246 consensus_14156#3 ------------------------------------------------------ consensus_14156#4 ------------------------------------------------------ |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||