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Oryza sativa
cluster # 1416 cluster # 1416       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1416#0 length = 3305 sequences # 2  

consensusID : consensus_1416#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 3305
fasta sequence
                              [GTAGGTATGCAATTTTGTCGAAATTTACATAGTAACAACCGAAAGGCCCCCGAAAACCTCGAAACGCATGAGCCAACCCACGCCGCCGACGACGACGGCCACCACCACCGCCCTGCGCGAGTGGAACCGCCTGATCCAGCACGCCGCCGCGTCGGGCTCCTACTCCCGCTGCCTCCGCCACTACGCCTCCCTCCTCGCCGCGGGCCTCGGCGGCGGCGGCGCATCCACCTTCCCGTCCCTCGCCAAGTCATGCGCCGCGCTCCGCCTCCCCCGCCTCGGCGCCGCCGTCCACGCCCACGCCCTCCTCGCCGGCGCCGCCTCCGCCGTGTTCGTCCGGACCTCCCTGCTCGACATGTACGCCAAGTGCGGGCGCCTCCCCGACGCGCGCCGCCTGTTCGACGAAATGCCGCGCCCGACCCTGGTCTCCTGGAACTGCATGGTCGCTGCGTACGGCAGGAGCTCCCAGGTGGAGGAGTCTGTTGCGGTGTTCAACGCGATGCGGCGTGCGGGGGTCAGACCCAGCGAGGGCACACTCGTCGGCGTGCTCTCCGGGTGTGTGGGCTCCGTTTCCGCAAGCAATCCTGGCATGTGCGTCTACGGGTTTAGCGTGAAATCTGGGCTTGATGCCGGTTTGCCTGTGTTGAACTCGGTTCTCACCATGCTTGTCCGTGGTAGCCATCTGGATGCTGCGCGGTTGTTGTTTGATGGAATATGCAACAAGTCTGTAGTTACTTGGACTGCATTGGCATCTGGTTATTTACTTAGAGGGGATTATCTGGAGGTGTTTGATCTGTTCAACCGCATGCGGGGAGTTGGGAAAAATGTTGACTCGGTAGTGCTCGTGAATCTCATATCAGCTGCTGTTCTGTTTGGGAACTTGTCGGTGGCCAAGGGTGTGCATGCTCTCATTATTAAGCTTGGCTTTGAATGTGAGGAAGACCTTGCGGCATCATTGATAAACTTGTATGCAAAGTGTGGAGATCTTGAATCCGCTCGAGAAGTCTTTGATGCAGTTCACATGGCGAATGTGGTTGTGTGGACTTCAATGATAAGTGGGTATGTTGAAGGTGGTCATCTGAATGAAGCGTTGGTGATGTTCGATAGCATGGTGTGCGCAAACATTGAGCCGAATGAAGCAACTCTGTCATCAGTTCTTTCAGCTTGTGCCAAATTGGGGTCTGCTAATCTGGGGAAAAAGGTTGAGGAGCAGGCAATTGCCACTGGACTGCATTCAGAGCCGCGAGTAGCTACTGGATTAATCGACATGTATAGCAAGTTTGGTAGCATCAATCTGGCTAGGAAAATATTTGAGGGTGTTACCAATAGAGATATAGCTGTTTGGAGTGCCATGATTAATGGGTATGCTTGCAATGGAGAAGGAAGTGAGGCTCTTGTCCTTTTCAAGGAGATGAAAAACAAAGGTTTTCAACCAGATGGGATTGCGTTTACTCATGTTCTTACCGCATGCAACTATTCTGGTTTAGTAGATGAAGGTCTTGAGTGCTTTCACAGCATGACAATGGAATATGGTATCGAGCCATCTATTGAACATCATATGTGCATGGTTGATTTGCTTTGTAAAGCTGGTCATTTTGGGAGCGCCCTAAAGTTCTTCAAGCAGATGCCAAGTGAGGTGCAAAATAAGGTTTTAGCTCCTATAATTAGTTCATACAGTGCTCGTTGTGCTGATTCATCCATAGATTTCATACCAGAGGAACTTCTGAATTTGGAGACTCAAGATTCTGATCACTGTGTTCTGATGTCTAATATGCTCAGTTGTTTAGGGAAATGGAAGAAGGCCACAAGTTATAGGAGGCAACTAAGCAAGCAAGGATTAATGAAGGAACCTGGATGGAGTTGTATTGAGCTGAGTGGCTAATTATTCTTGATGTTTAGAGCACTTGATTCACATAATTTTCCAATCCTAAGAGTAGTCACGTCTCTGGGGGAAAAAAGAGGGGTCATGTCTCATGAGTTTATTGAACAGATATCATTCTCAAGTGAAGCCTTAAGGTTGAAGAATTAATTCATCTTGCAGTCTCAAGTTCAACGTGCATTACTAGAATTACACACTTGCAGCCAATATGGTTTGAGGATATGGTTTGGCACAATAAAATGTGACATCCGTTCCAGATACATTGATTTGGTGAGGACCATCCTCTGGTTAATGGAGAAGGGTACCATTCAGGAAAGTGGCTTTTTATTGGTATTCAAGCACGTCAGGTACTTAAGGTTCATAATGGTCCGTGTCTGGTGATCTAATAAATAGAACCCTTCAATGGAACGAAAAGAGAGAAAACATTTTAAGATGGCACCACTGAATCTACTCAGAGTTGGAATTATGGTCCTGTACTCTCCTCCATCCACTAACCTGTTCAAGCTGGCATGGTCACTTGCCTACTGGCTACTGCCGTTCCACAGCATGCTTCTCTCTAGCTGGGTGTGATTGCTAAAAGTTGGTGATAAGGAGGAGAAAAAGCATCCCTCGTGTGATCCCAAGCAAGAAGCTTAAGAAGGATCCCTAGGACGAGGGGGAGACAAGCAGGCAAATATAAAGATGACACTGCATAATTGATAATTCACTGACCACCTCAGATATGCTGAGAACGTGCTCATAGCATGGCGGTGAAGTCCTCATTTGTGAGGCTACAGGCCAGGGCTCAACCCTGGCTCTCACAAAAAAAAAAAAGGTCCCTTGCTGTGTGTTCCCCAAAAGCGCGAGTTAAGAACCGGTCTTCGGGTCCTCATATAGGAAGCAGAAGGGAACACACACATATACTGAATTTCAAGGTGACCGATATCACTGGAACGGGAGGCACACGGAATGCCAACAACGGTTGCAGCACCGAACATAGTTCCAGTAGCCTCAGCTACCAAAGTCTGGGAATGAGACCAGGGGGGCTGGAGCACTTGGTTGCCTTGCAAAGTTGCAATGGCATCAAGCAGTGCAGAGAAAGAAGGCACGGATTCAAAGCATGCCGGTCACATGCTCACAGCCCTCCGGCGATGGCCTCGTTCAGCCGTTCTTCTTGAGTGATCTCTACTCGTAGGGGCTTGGCTTGATGCAGCGCACGAGTAGGGATGCAAGCGGGGGCGGACAAGCGGGCTTTTTTATTCCGCTTATCCAACTTCTAGCTTATTTTTTCTTCTAAATTTTGTACTACCATACCAGAAATAAACTAGCAAGCGGGTAACGAGACTACCCACTTGCATCCCTCCCTACGCACGAGCTGTGCTCACGTGATCTGAACACATGCATGTTAGCTTGTGCTTCAGAACGATTTTTTATTCAGTTTAGTGGGAGG]

[+] EMBL AK066711             [GTAGGTATGCAATTTTGTCGAAATTTACATAGTAACAACCGAAAGGCCCCCGAAAACCTCGAAACGCATGAGCCAACCCACGCCGCCGACGACGACGGCCACCACCACCGCCCTGCGCGAGTGGAACCGCCTGATCCAGCACGCCGCCGCGTCGGGCTCCTACTCCCGCTGCCTCCGCCACTACGCCTCCCTCCTCGCCGCGGGCCTCGGCGGCGGCGGCGCATCCACCTTCCCGTCCCTCGCCAAGTCATGCGCCGCGCTCCGCCTCCCCCGCCTCGGCGCCGCCGTCCACGCCCACGCCCTCCTCGCCGGCGCCGCCTCCGCCGTGTTCGTCCGGACCTCCCTGCTCGACATGTACGCCAAGTGCGGGCGCCTCCCCGACGCGCGCCGCCTGTTCGACGAAATGCCGCGCCCGACCCTGGTCTCCTGGAACTGCATGGTCGCTGCGTACGGCAGGAGCTCCCAGGTGGAGGAGTCTGTTGCGGTGTTCAACGCGATGCGGCGTGCGGGGGTCAGACCCAGCGAGGGCACACTCGTCGGCGTGCTCTCCGGGTGTGTGGGCTCCGTTTCCGCAAGCAATCCTGGCATGTGCGTCTACGGGTTTAGCGTGAAATCTGGGCTTGATGCCGGTTTGCCTGTGTTGAACTCGGTTCTCACCATGCTTGTCCGTGGTAGCCATCTGGATGCTGCGCGGTTGTTGTTTGATGGAATATGCAACAAGTCTGTAGTTACTTGGACTGCATTGGCATCTGGTTATTTACTTAGAGGGGATTATCTGGAGGTGTTTGATCTGTTCAACCGCATGCGGGGAGTTGGGAAAAATGTTGACTCGGTAGTGCTCGTGAATCTCATATCAGCTGCTGTTCTGTTTGGGAACTTGTCGGTGGCCAAGGGTGTGCATGCTCTCATTATTAAGCTTGGCTTTGAATGTGAGGAAGACCTTGCGGCATCATTGATAAACTTGTATGCAAAGTGTGGAGATCTTGAATCCGCTCGAGAAGTCTTTGATGCAGTTCACATGGCGAATGTGGTTGTGTGGACTTCAATGATAAGTGGGTATGTTGAAGGTGGTCATCTGAATGAAGCGTTGGTGATGTTCGATAGCATGGTGTGCGCAAACATTGAGCCGAATGAAGCAACTCTGTCATCAGTTCTTTCAGCTTGTGCCAAATTGGGGTCTGCTAATCTGGGGAAAAAGGTTGAGGAGCAGGCAATTGCCACTGGACTGCATTCAGAGCCGCGAGTAGCTACTGGATTAATCGACATGTATAGCAAGTTTGGTAGCATCAATCTGGCTAGGAAAATATTTGAGGGTGTTACCAATAGAGATATAGCTGTTTGGAGTGCCATGATTAATGGGTATGCTTGCAATGGAGAAGGAAGTGAGGCTCTTGTCCTTTTCAAGGAGATGAAAAACAAAGGTTTTCAACCAGATGGGATTGCGTTTACTCATGTTCTTACCGCATGCAACTATTCTGGTTTAGTAGATGAAGGTCTTGAGTGCTTTCACAGCATGACAATGGAATATGGTATCGAGCCATCTATTGAACATCATATGTGCATGGTTGATTTGCTTTGTAAAGCTGGTCATTTTGGGAGCGCCCTAAAGTTCTTCAAGCAGATGCCAAGTGAGGTGCAAAATAAGGTTTTAGCTCCTATAATTAGTTCATACAGTGCTCGTTGTGCTGATTCATCCATAGATTTCATACCAGAGGAACTTCTGAATTTGGAGACTCAAGATTCTGATCACTGTGTTCTGATGTCTAATATGCTCAGTTGTTTAGGGAAATGGAAGAAGGCCACAAGTTATAGGAGGCAACTAAGCAAGCAAGGATTAATGAAGGAACCTGGATGGAGTTGTATTGAGCTGAGTGGCTAATTATTCTTGATGTTTAGAGCACTTGATTCACATAATTTTCCAATCCTAAGAGTAGTCACGTCTCTGGGGGAAAAAAGAGGGGTCATGTCTCATGAGTTTATTGAACAGATATCATTCTCAAGTGAAGCCTTAAGGTTGAAGAATTAATTCATCTTGCAGTCTCAAGTTCAACGTGCATTACTAGAATTACACACTTGCAGCCAATATGGTTTGAGGATATGGTTTGGCACAATAAAATGTGACATCCGTTCCAGATACATTGATTTGGTGAGGACCATCCTCTGGTTAATGGAGAAGGGTACCATTCAGGAAAGTGGCTTTTTATTGGTATTCAAGCACGTCAGGTACTTAAGGTTCATAATGGTCCGTGTCTGGTGATCTAATAAATAGAACCCTTCAATGGAACGAAAAGAGAGAAAACATTTTAAGATGGCACCACTGAATCTACTCAGAGTTGGAATTATGGTCCTGTACTCTCCTCCATCCACTAACCTGTTCAAGCTGGCATGGTCACTTGCCTACTGGCTACTGCCGTTCCACAGCATGCTTCTCTCTAGCTGGGTGTGATTGCTAAAAGTTGGTGATAAGGAGGAGAAAAAGCATCCCTCGTGTGATCCCAAGCAAGAAGCTTAAGAAGGATCCCTAGGACGAGGGGGAGACAAGCAGGCAAATATAAAGATGACACTGCATAATTGATAATTCACTGACCACCTCAGATATGCTGAGAACGTGCTCATAGCATGGCGGTGAAGTCCTCATTTGTGAGGCTACAGGCCAGGGCTCAACCCTGGCTCTCACAAAAAAAAAAAAGGTCCCTTGCTGTGTGTTCCCCAAAAGCGCGAGTTAAGAACCGGTCTTCGGGTCCTCATATAGGAAGCAGAAGGGAACACACACATATACTGAATTTCAAGGTGACCGATATCACTGGAACGGGAGGCACACGGAATGCCAACAACGGTTGCAGCACCGAACATAGTTCCAGTAGCCTCAGCTACCAAAGTCTGGGAATGAGACCAGGGGGGCTGGAGCACTTGGTTGCCTTGCAAAGTTGCAATGGCATCAAGCAGTGCAGAGAAAGAAGGCACGGATTCAAAGCATGCCGGTCACATGCTCACAGCCCTCCGGCGATGGCCTCGTTCAGCCGTTCTTCTTGAGTGATCTCTACTCGTAGGGGCTTGGCTTGATGCAGCGCACGAGTAGGGATGCAAGCGGGGGCGGACAAGCGGGCTTTTTTATTCCGCTTATCCAACTTCTAGCTTATTTTTTCTTCTAAATTTTGTACTACCATACCAGAAATAAACTAGCAAGCGGGTAACGAGACTACCCACTTGCATCCCTCCCTACGCACGAGCTGTGCTCACGTGATCTGAACACATGCATGTTAGCTTGTGCTTCAGAACGATTTTTTATTCAGTTTAGTGGGAGG]
[+] EMBL CF323481             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TGATTTGGTGAGGACCATCCTCTGGTTAATGGAGAAGGGTACCATTCAGGAAAGTGGCTTTTTATTGGTATTCAAGCACGTCAGGTACTTAAGGTTCATAATGGTCCGTGTCTGGTGATCTAATAAATAGAACCCTTCAATGGAACGAAAAGAGAGAAAACATTTTAAGATGGCACCACTGAATCTACTCAGAGTTGGAATTATGGTCCTGTACTCTCCTCCATCCACTAACCTGTTCAAGCTGGCATGGTCACTTGCCTACTGGCTACTGCCGTTCCACAGCATGCTTCTCTCTAGCTGGGTGTGATTGCTAAAAGTTGGTGATAAGGAGGAGAAAAAGCATCCCTCGTGTGATCCCAAGCAAGAAGCTTAAGAAGGATCCCTAGGACGAGGGGGAGACAAGCAGGCAAATATAAAGATGACACTGCATAATTGATAATTCACTGACCACCTCAGATATGCTGAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]


>consensus_1416#0 GTAGGTATGCAATTTTGTCGAAATTTACATAGTAACAACCGAAAGGCCCCCGAAAACCTC GAAACGCATGAGCCAACCCACGCCGCCGACGACGACGGCCACCACCACCGCCCTGCGCGA GTGGAACCGCCTGATCCAGCACGCCGCCGCGTCGGGCTCCTACTCCCGCTGCCTCCGCCA CTACGCCTCCCTCCTCGCCGCGGGCCTCGGCGGCGGCGGCGCATCCACCTTCCCGTCCCT CGCCAAGTCATGCGCCGCGCTCCGCCTCCCCCGCCTCGGCGCCGCCGTCCACGCCCACGC CCTCCTCGCCGGCGCCGCCTCCGCCGTGTTCGTCCGGACCTCCCTGCTCGACATGTACGC CAAGTGCGGGCGCCTCCCCGACGCGCGCCGCCTGTTCGACGAAATGCCGCGCCCGACCCT GGTCTCCTGGAACTGCATGGTCGCTGCGTACGGCAGGAGCTCCCAGGTGGAGGAGTCTGT TGCGGTGTTCAACGCGATGCGGCGTGCGGGGGTCAGACCCAGCGAGGGCACACTCGTCGG CGTGCTCTCCGGGTGTGTGGGCTCCGTTTCCGCAAGCAATCCTGGCATGTGCGTCTACGG GTTTAGCGTGAAATCTGGGCTTGATGCCGGTTTGCCTGTGTTGAACTCGGTTCTCACCAT GCTTGTCCGTGGTAGCCATCTGGATGCTGCGCGGTTGTTGTTTGATGGAATATGCAACAA GTCTGTAGTTACTTGGACTGCATTGGCATCTGGTTATTTACTTAGAGGGGATTATCTGGA GGTGTTTGATCTGTTCAACCGCATGCGGGGAGTTGGGAAAAATGTTGACTCGGTAGTGCT CGTGAATCTCATATCAGCTGCTGTTCTGTTTGGGAACTTGTCGGTGGCCAAGGGTGTGCA TGCTCTCATTATTAAGCTTGGCTTTGAATGTGAGGAAGACCTTGCGGCATCATTGATAAA CTTGTATGCAAAGTGTGGAGATCTTGAATCCGCTCGAGAAGTCTTTGATGCAGTTCACAT GGCGAATGTGGTTGTGTGGACTTCAATGATAAGTGGGTATGTTGAAGGTGGTCATCTGAA TGAAGCGTTGGTGATGTTCGATAGCATGGTGTGCGCAAACATTGAGCCGAATGAAGCAAC TCTGTCATCAGTTCTTTCAGCTTGTGCCAAATTGGGGTCTGCTAATCTGGGGAAAAAGGT TGAGGAGCAGGCAATTGCCACTGGACTGCATTCAGAGCCGCGAGTAGCTACTGGATTAAT CGACATGTATAGCAAGTTTGGTAGCATCAATCTGGCTAGGAAAATATTTGAGGGTGTTAC CAATAGAGATATAGCTGTTTGGAGTGCCATGATTAATGGGTATGCTTGCAATGGAGAAGG AAGTGAGGCTCTTGTCCTTTTCAAGGAGATGAAAAACAAAGGTTTTCAACCAGATGGGAT TGCGTTTACTCATGTTCTTACCGCATGCAACTATTCTGGTTTAGTAGATGAAGGTCTTGA GTGCTTTCACAGCATGACAATGGAATATGGTATCGAGCCATCTATTGAACATCATATGTG CATGGTTGATTTGCTTTGTAAAGCTGGTCATTTTGGGAGCGCCCTAAAGTTCTTCAAGCA GATGCCAAGTGAGGTGCAAAATAAGGTTTTAGCTCCTATAATTAGTTCATACAGTGCTCG TTGTGCTGATTCATCCATAGATTTCATACCAGAGGAACTTCTGAATTTGGAGACTCAAGA TTCTGATCACTGTGTTCTGATGTCTAATATGCTCAGTTGTTTAGGGAAATGGAAGAAGGC CACAAGTTATAGGAGGCAACTAAGCAAGCAAGGATTAATGAAGGAACCTGGATGGAGTTG TATTGAGCTGAGTGGCTAATTATTCTTGATGTTTAGAGCACTTGATTCACATAATTTTCC AATCCTAAGAGTAGTCACGTCTCTGGGGGAAAAAAGAGGGGTCATGTCTCATGAGTTTAT TGAACAGATATCATTCTCAAGTGAAGCCTTAAGGTTGAAGAATTAATTCATCTTGCAGTC TCAAGTTCAACGTGCATTACTAGAATTACACACTTGCAGCCAATATGGTTTGAGGATATG GTTTGGCACAATAAAATGTGACATCCGTTCCAGATACATTGATTTGGTGAGGACCATCCT CTGGTTAATGGAGAAGGGTACCATTCAGGAAAGTGGCTTTTTATTGGTATTCAAGCACGT CAGGTACTTAAGGTTCATAATGGTCCGTGTCTGGTGATCTAATAAATAGAACCCTTCAAT GGAACGAAAAGAGAGAAAACATTTTAAGATGGCACCACTGAATCTACTCAGAGTTGGAAT TATGGTCCTGTACTCTCCTCCATCCACTAACCTGTTCAAGCTGGCATGGTCACTTGCCTA CTGGCTACTGCCGTTCCACAGCATGCTTCTCTCTAGCTGGGTGTGATTGCTAAAAGTTGG TGATAAGGAGGAGAAAAAGCATCCCTCGTGTGATCCCAAGCAAGAAGCTTAAGAAGGATC CCTAGGACGAGGGGGAGACAAGCAGGCAAATATAAAGATGACACTGCATAATTGATAATT CACTGACCACCTCAGATATGCTGAGAACGTGCTCATAGCATGGCGGTGAAGTCCTCATTT GTGAGGCTACAGGCCAGGGCTCAACCCTGGCTCTCACAAAAAAAAAAAAGGTCCCTTGCT GTGTGTTCCCCAAAAGCGCGAGTTAAGAACCGGTCTTCGGGTCCTCATATAGGAAGCAGA AGGGAACACACACATATACTGAATTTCAAGGTGACCGATATCACTGGAACGGGAGGCACA CGGAATGCCAACAACGGTTGCAGCACCGAACATAGTTCCAGTAGCCTCAGCTACCAAAGT CTGGGAATGAGACCAGGGGGGCTGGAGCACTTGGTTGCCTTGCAAAGTTGCAATGGCATC AAGCAGTGCAGAGAAAGAAGGCACGGATTCAAAGCATGCCGGTCACATGCTCACAGCCCT CCGGCGATGGCCTCGTTCAGCCGTTCTTCTTGAGTGATCTCTACTCGTAGGGGCTTGGCT TGATGCAGCGCACGAGTAGGGATGCAAGCGGGGGCGGACAAGCGGGCTTTTTTATTCCGC TTATCCAACTTCTAGCTTATTTTTTCTTCTAAATTTTGTACTACCATACCAGAAATAAAC TAGCAAGCGGGTAACGAGACTACCCACTTGCATCCCTCCCTACGCACGAGCTGTGCTCAC GTGATCTGAACACATGCATGTTAGCTTGTGCTTCAGAACGATTTTTTATTCAGTTTAGTG GGAGG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)