These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14240#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1857 fasta sequence [GCTCCACCCCCTCCTCCTCCTTCGAAACCCTA-GCCTCACCACCCCCCGCCACGAGGGAGGAGCGAGCGGCGCAGTGGTGGACGGCGGCGGCGGCGGGATGGAGGGGCCCAAGAGGTCGCAGCTGAGGGTGCGGCTCCGCGTGACGGCGCGGCGGAGGGGCGGCGACGGCGGCGCGGACGGCGGAGGGAGCGGGGGCGGAGGCGGCGGGGCCGGGGGCAGGAAGCGGCTGCTGGACGCGCCGGCCTTCAACTCGGCCGCGAAGCTGCAGCGGCGCGAGATCGGGGGCAGGCAGCTCGCCGCGCGCGGCGGGGGCGCCGCGTCCGCCGTGCCCGAGCGGTTCCGGAACATGCATCTCCAGGAAGAGTTCGATACGTATGATCACAATGCCCACCTATTTGTGAAGCTGCAGTTTCTTAAAAAGAGATCCAAAATAATTGAGATTGTTGCAGCAAAAGATATCATATTTGCTCTTGCGCACTCTGGGTTGTGTGCTGCTTTTAGTCGAGTTACAAATAAGCGCATATCCTTCCTGAATTTAAGCCCAGATGAAGTCATCCGGAGCTTGTTCTACAACAAGAACAATGATTCACTTATTACTGTGTCTGTTTATGCGTCAGACCATTTTAGCACATTGAAGTGCAGAACAACCCCAATCGAGTATATAAGGAGGAATCAGTTAGATGCTGGGTTTCCTCTTTTTGAAACAGAATCTCTGAAGTGGCCTGGCTTTGTGGAGTTTGATGATGTGAATGGAAAAGTACTCACCTACTCAGCTCAGGATGGTATCTATAAGGTCTTCGATTTGAAGAATTACTCTTTTCTATATTCAATACCTGACACCAATGTGCAGGAGATAAAAATAAGTCCAGGAATCATGCTCTTGATATATGAAAGAACACCATGTCATGTTCCTTTGAAGATATTGTCAATTGAAGATGGAAGACCACTANAATCCTTCACGCATTTGTTGCACCGTAATAAGAAAATTGATTTTATTGAGCAAATTCAATG-AAAGCTCCTTGTCAAGCAAGAAGATGAGAACCTTCAGATACTTGATGTACGGAGTTCTGAGCTAATTGAAGTCAGTGTTACCAAGTTTATGACTCCATCAGCATTCATTTTTCTGTACGAGAACAATCTCTTCTTGACATTCCGAAACAGGACGGTTGCTGTATGGAATTTTCGAGGAGAGCTCGTGACCTCATTTGAAGACCATTTGCTTTGGCATCAAGATTGTAGCACCAACAATATCTACATTACCAGTGATCAGGATCTGATTATCTCATACTGCAAATCTGAGGCAGGGGTTGATGATGGTACAGTACCTCCAATTGGGTCTATCAACATGAGTGACATTATGACTGGCAAATGCATCGCCAAGATTGCTGCTAATGATCCCACCCTCCGTATTGGCCCTCGCAAGAATGGTAACTCTGAGAGGTCCTCAATTTGGAGCACCATTCCAGAAGCTCTTGAAGATGTCACAGCGCTTTTTTATGACGAGGACAGGAATGAGATCTATACTGGCAACAGGCATGGGCTGGTGCATGTGTGGTCCAACTAGGTTGTAATATGTATATGTACATACGCCCTTTTCGATTTGACCAGAAGATTGGATTAGCCATTGTGCACCATCATCCCCTGCCTGGTGATCACCTTAGTTTTTGTATTTTTGGTCTTTTGGCAAAGAATGTTATTCCCTTGTCAGTCAAGAGAAAAATGTAGTTACCCTGTATATATCTTTTGTAATGCCCTGTCATATACCATGTTCTTGGCAGCTGGCCTCTCTGTCCCAACCACGAAACATCTGGCAGGAACCATCTAACTAATTAAGCTTCTCATTCCTAAAAAAAAAAA] [+] EMBL CB647577 [GCTCCACCCCTTCCTCCTCCTTCGAAACCCTA GCCTCACCACCCCCCGCCACGAGGGAGGAGCGAGCGGCGCAGTGGTGGACGGCGGCGGCGGCGGGATGGAGGGGCCCAAGAGGTCGCAGCTGAGGGTGCGGCTCCGCGTGACGGCGCGGCGGAGGGGCGGCGACGGCGGCGCGGACGGCGGAGGGAGCGGGGGCGGAGGCGGCGGGGCCGGGGGCAGGAAGCGGCTGCTGGACGCGCCGGCCTTCAACTCGGCCGCGAAGCTGCAGCGGCGCGAGATCGGGGGCAGGCAGCTCGCCGCGCGCGGCGGGGGCGCCGCGTCCGCCGTGCCCGAGCGGTTCCGGAACATGCATCTCCAGGAAGAGTTCGATACGTATGATCACAATGCCCACCTATTTGTGAAGCTGCAGTTTCTTAAAAAGAGATCCAAAATAATTGAGATTGTTGCAGCAAAAGATATCATCTTTGCTCTTGCGCACTCTGGGTTGTGTGCTGCTTTTAGTCGAGTTACAAATAAGCGCATATCCTTCCTGAATTTAAGCCCAGATGAAGTCATCCGGAGCTTGTTCTACAACAAGAACAATGATTCACTTATTACTGTGTCTGTTTATGCGTCAGACCATTTTAGCACATTGAAGTGCAGAACAACCCCAATCGAGTATATAAGGAGGAATCAGTTAGATGCTGGGTTTCCTCTTTTTGAAACAGAATCTCTGAAGTGGCCTGGCTTTGTGGAGTTTGATGA ] [+] EMBL AU070217 [ ctCCTCCTNCTCCTTNGAAACCCTA GCCTCACCACCCCCCGCCACGAGGGAGGAGCGAGCGGCGCAGTGGTGGACGGCGGCGGCGGCGGGATGGAGGGGCCCAAGAGGTCGCAGCTGAGGGTGCGGCTCCGCGTGACGGCGCGGCGGAGNNGCGGCGACGGCGGCGCGGACGGCGGAGGGAGCGNNTGCGGAGGCGGCGGNGCCGGGNGCAGGAAGCGGCTGCTGGACGCGCCGGC ] [+] EMBL CB651286 [ CCTCCTCCTCTTTCGAAACCCTATGCCTCACCACCCCCCGCCACGAGGGAGGAGCGAGCGGCGCAGTGGTGGACGGCGGCGGCGGCGGGATGGAGGGGCCCAAGAGGTCGCAGCTGAGGGTGCGGCTCCGCGTGACGGCGCGGCGGAGGGGCGGCGACGGCGGCGCGGACGGCGGAGGGAGCGGGGGCGGAGGCGGCGGGGCCGGGGGCAGGAAGCGGCTGCTGGACGCGCCGGCCTTCAACTCGGCCGCTAAGCTGCAGCGGCGCGAGATCGGGGGCAGGCAGCTCGCCGCGCGCGGCGGGGGCGCCGCGTCCGCCGTGCCCGAGCGGTTCCGGAACATGCATCTCCAGGAAGAGTTCGATACGTATGATCACAATGCCCACCTATTTGTGAAGCTGCAGTTTCTTAAAAAGAGATCCGAAATAATTGAGATTGTTGCAGCAAAAGATATCATATTTGCTCTTGCGCACTCTGGGTTGTGTGCTGCTTTTAGTCGAGTTACAAATAAGCGCATATCCTTCCTGAATTTAAGCCCAGATGAAGTCATCCGGAGCTTGTTCTACAACAAGAACAATGATTCACTTATTACTGTGTCTGTTTATGCGTCAGACCATTTTAGCCCATTGAAGTGCCAAACAACCCCc ] [+] EMBL CB630483 [ GCCGGCCTTCAACTCGGCCGCGAAGCTGCAGCGGCGCGAGATCGGGGGCAGGCAGCTCGCCGCGCGCGGCGGGGGCGCCGCGTCCGCCGTGCCCGAGCGGTTCCGGAACATGCATCTCCAGGAAGAGTTCGATACGTATGATCACAATGCCCACCTATTTGTGAAGCTGCAGTTTCTTAAAAAGAGATCCAAAATAATTGAGATTGTTGCAGCAAAAGATATCATATTTGCTCTTGCGCACTCTGGGTTGTGTGCTGCTTTTAGTCGAGTTACAAATAAGCGCATATCCTTCCTGAATTTAAGCCCAGATGAAGTCATCCGGAGCTTGTTCTACAACAAGAACAATGATTCACTTATTACTGTGTCTGTTTATGCGTCAGACCATTTTAGCACATTGAAGTGCAGAACAACCCCAATCGAGTATATAAGGAGGAATCAGTTAGATGCTGGGTTTCCTCTTTTTGAAACAGAATCTCTGAAGTGGCCTGGCTTTGTGGAGTTTGATGATGTGAATGGAAAAGTACTCACCTACTCAGCTCAGGATGGTATCTATAAGGTCTTCGATTTGAAGAATTACTCTTTTCTATATTCAATACCTGACACCAATGTGCAGGAGATAAAAATAAGTCCAGGAATCATGCTCTTGATATATGAAAGAACACCATGTCATGTTCCTTTGAAGATATTGTCAATTGAAGATGGAAGACCACTANAATCCTTCACGCATTTGTTGCACCGTAATAAGAAAATTGATTTTATTGAGCAAATTCAATG AAAGCTCCTTGTCAAGCAAGAAGATGAGAACCTTCAG ] [+] EMBL CF196723 [ TTTATCGAGC AATTCAATGAAAAGCTCCTTGTCAAGCAAGAAGATGAGAACCTTCAGATACTTGATGTACGGAGTTCTGAGCTAATTGAAGTCAGTGTTACCAAGTTTATGACTCCATCAGCATTCATTTTTCTGTACGAGAACAATCTCTTCTTGACATTCCGAAACAGGACGGTTGCTGTATGGAATTTTCGAGGAGAGCTCGTGACCTCATTTGAAGACCATTTGCTTTGGCATCAAGATTGTAGCACCAACAATATCTACATTACCAGTGATCAGGATCTGATTATCTCATACTGCAAATCTGAGGCAGGGGTTGATGATGGTACAGTACCTCCAATTGGGTCTATCAACATGAGTGACATTATGACTGGCAAATGCATCGCCAAGATTGCTGCTAATGATCCCACCCTCCGTATTGGCCCTC ] [-] EMBL CB630484 [ tga AAAGCTCCTTGTCAAGCAAGAAGATGAGAACCTTCAGATACTTGATGTACGGAGTTCTGAGCTAATTGAAGTCAGTGTTACCAAGTTTATGACTCCATCAGCATTCATTTTTCTGTACGAGAACAATCTCTTCTTGACATTCCGAAACAGGACGGTTGCTGTATGGAATTTTCGAGGAGAGCTCGTGACCTCATTTGAAGACCATTTGCTTTGGCATCAAGATTGTAGCACCAACAATATCTACATTACCAGTGATCAGGATCTGATTATCTCATACTGCAAATCTGAGGCAGGGGTTGATGATGGTACAGTACCTCCAATTGGGTCTATCAACATGAGTGACATTATGACTGGCAAATGCATCGCCAAGATTGCTGCTAATGATCCCACCCTCCGTATTGGCCCTCGCAAGAATGGTAACTCTGAGAGGTCCTCAATTTGGAGCACCATTCCAGAAGCTCTTGAAGATGTCACAGCGCTTTTTTATGACGAGGACAGGAATGAGATCTATACTGGCAACAGGCATGGGCTGGTGCATGTGTGGTCCAACTAGGTTGTAATATGTATAAGTACATACGCCCTTTTCGATTTGACCAGAAGATTGGATTAGCCATTGTGCACCATCATCCCCTGCCTGGTGATCACCTTAGTTTTTGTATTTTTGGTCTTTTGGCAAAGAATGTTATTCCCTTGTCAGTCAAGAGAAAAATGTAGTTACCCTGTATATATCTTTTGTAATGCCCTGTCATATGCCATGTTCTTGGCAGCTGGCCTCTCTGTCCCAA ] [-] EMBL CB651287 [ AGTCAGTGTTACCAAGTTTATGACTCCATCAGCATTCATTTTTCTGTACGAGAACAATCTCTTCTTGACATTCCGAAACAGGACGGTTGCTGTATGGAATTTTCGAGGAGAGCTCGTGACCTCATTTGAAGACCATTTGCTTTGGCATCAAGATTGTAGCACCAACAATATCTACATTACCAGTGATCAGGATCTGATTATCTCATACTGCAAATCTGAGGCAGGGGTTGATGATGGTACAGTACCTCCAATTGGGTCTATCAACATGAGTGACATTATGACTGGCAAATGCATCGCCAAGATTGCTGCTAATGATCCCACCCTCCGTATTGGCCCTCGCAAGAATGGTAACTCTGAGAGGTCCTCAATTTGGAGCACCATTCCAGAAGCTCTTGAAGATGTCACAGCGCTTTTTTATGACGAGGACAGGAATGAGATCTATACTGGCAACAGGCATGGGCTGGTGCATGTGTGGTCCAACTAGGTTGTAATATGTATATGTACATACGCCCTTTTCGATTTGACCAGAAGATTGGATTAGCCATTGTGCACCATCATCCCCTGCCTGGTGATCACCTTAGTTTTTGTATTTTTGGTCTTTTGGCAAAGAATGTTATTCCCTTGTCAGTCAAGAGAAAAATGTAGTTACCCTGTATATATCTTTTGTAATGCCCTGTCATATACCATGTTCTTGGCAGCTGGCCTCTCTGTCCCAACCACGAAACATCTGGCAGGAACCATCTAACTAATTAAGCTTCTCATTCCT ] [+] EMBL CB000896 [ GTTTATGACTCCATCAGCATTCATTTTTCTGTACGAGAACAATCTCTTCTTGACATTCCGAAACAGGACGGTTGCTGTATGGAATTTTCGAGGAGAGCTCGTGACCTCATTTGAAGACCATTTGCTTTGGCATCAAGATTGTAGCACCAACAATATCTACATTACCAGTGATCAGGATCTGATTATCTCATACTGCAAATCTGAGGCAGGGGTTGATGATGGTACAGTACCTCCAATTGGGTCTATCAACATGAGTGACATTATGA ] [+] EMBL AU173800 [ CTNTGAGAGGTCCTCAATTTGGAGCACCATTCCAGAAGCTCTTGAAGATGTCACAGCGCTTTTTTATGACGAGGACAGGAATGAGATCTATACTGGCAACAGGCATGGGCTGGTGCATGTGTGGTCCAACTAGGTTGTAATATGTATATGTACATACGCCCTTTTCGATTTGACCAGAAGATTGGATTAGCCATTGTGCACCATCATCCCCTGCCTGGTGATCACCTTAGTTTTTGTATTTTTGGTCTTTTGGCAAAGAATGTTATTCCCTTGTCAGTCAAGAGAAAAATGTAGTTACCCTGTATATATCTTTTGTAATGCCCTGTCATATACCATGTTCTTGGCAGCTGGCCTNTCTGTCCCAACCACGAAACATCTGGCAGGAACCATCTAACTAATTAAGCTTCTCATTCCAAAAAAAAAAAA] consensusID : consensus_14240#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 692 fasta sequence [ATGTACGGAGTTCTGAGCTAATTGAAGTCAGTGTACCCAAGTTTATGCCTCCATCAGCATTCATTTTTCTGTACTAGAACAATCTCTTCTTGACATTCCGAAACAGGACGGTTGCTGTATGGAATTTTCGAGGAGAGCTCGTGACCTCATTTGAAGACCATTTGCTTTGGCATCAAGATTGTAGCACCAACAATATCTACATTACCAGTGATCAGGATCTGATTATCTCATACTGCAAATCTGAGGCAGGGGTTGATGATGGTACAGTACCTCCAATTGGGTCTATCAACATGAGTGACATTATGACTGGCAAATGCATCTCCAAGATTGCTGCTAATGATCCCACCCTCCGTATTGGCCCTCGCAAGAATGGTAACTTTGAGAGGTCCTCAATTTGGAGCACCATTCCAGAAGCTCTTGAAGATGTCACAGCGCTTCTTTATGACGAGGACAGGAATGAGATCTATACTGGCAACAGGCATGGGCTGGTGCATGTGTGGTCCAACTAGGTTGTAATATGTATATGTACATACGCCCTTTTCGATTTGACCAGAAGATTGGATTAGCCATTGTGCACCATCATCCCCTGCCTGGTGATCACCTTAGTTTTTGTATTTTTGGTCTTTTGGCAAAGAATGTTATTCCCTTGTCAGTCAAGAGAAAAATGTAGTTACCCTGTAAAAAAAAAAAAA] [-] EMBL CA762179 [ATGTACGGAGTTCTGAGCTAATTGAAGTCAGTGTACCCAAGTTTATGCCTCCATCAGCATTCATTTTTCTGTACTAGAACAATCTCTTCTTGACATTCCGAAACAGGACGGTTGCTGTATGGAATTTTCGAGGAGAGCTCGTGACCTCATTTGAAGACCATTTGCTTTGGCATCAAGATTGTAGCACCAACAATATCTACATTACCAGTGATCAGGATCTGATTATCTCATACTGCAAATCTGAGGCAGGGGTTGATGATGGTACAGTACCTCCAATTGGGTCTATCAACATGAGTGACATTATGACTGGCAAATGCATCTCCAAGATTGCTGCTAATGATCCCACCCTCCGTATTGGCCCTCGCAAGAATGGTAACTTTGAGAGGTCCTCAATTTGGAGCACCATTCCAGAAGCTCTTGAAGATGTCACAGCGCTTCTTTATGACGAGGACAGGAATGAGATCTATACTGGCAACAGGCATGGGCTGGTGCATGTGTGGTCCAACTAGGTTGTAATATGTATATGTACATACGCCCTTTTCGATTTGACCAGAAGATTGGATTAGCCATTGTGCACCATCATCCCCTGCCTGGTGATCACCTTAGTTTTTGTATTTTTGGTCTTTTGGCAAAGAATGTTATTCCCTTGTCAGTCAAGAGAAAAATGTAGTTACCCTGTAAAAAAAAAAAAA] consensusID : consensus_14240#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 612 fasta sequence [CTCATACGGCAAATCTGAGCCCGGGGTTGATGATGGTACAGTACCTCCCATTGGGTCTATCAACATGAGCGACATTATGACTGGCCAATGCATCGCCAAGATTGCTGCTAATGATCCCACCNCTCCGTATTGGCCCTCGCCAAGAATGGTAACTTCTGAGAGGTCCCCCATTTGGAGCCACCCTTCCCAGAAGCTTCTTGAAGATGTTCACCCGCGCTTTTTTATGACCCGAGGACCCGGAACTGAGATCTATACCTGGCCACACGGCATGGGNCTGGTGCACTGTGTGGTCCCAACTAGGTTGTAATAAATGTATAATGTACATACCGCCCTTTTCCGATTTGACCCACGAAGATNTGGATTAGCCCCTTGTGCACCCATCATTCCCCTGCCTGGTGCGTCACCCTTAGTTTTNTGTATTNTTTGGTTCTTTTGGCCCAAGAATGTTATTCCCTTGTCACGTCCCAGAGAAAAATGTAGTTACCCCCGTATATATCTTTTGTAATGCCCCTGTCATATACACTGTTCTTGGCAGCTGGCCTCTCTGTCCCCACCCCGAAACATCTGGCCGGAACCATCTGACTAATTAAGCTTCTCATTCCCTTCGGTGTT] [-] EMBL CB967254 [CTCATACGGCAAATCTGAGCCCGGGGTTGATGATGGTACAGTACCTCCCATTGGGTCTATCAACATGAGCGACATTATGACTGGCCAATGCATCGCCAAGATTGCTGCTAATGATCCCACCNCTCCGTATTGGCCCTCGCCAAGAATGGTAACTTCTGAGAGGTCCCCCATTTGGAGCCACCCTTCCCAGAAGCTTCTTGAAGATGTTCACCCGCGCTTTTTTATGACCCGAGGACCCGGAACTGAGATCTATACCTGGCCACACGGCATGGGNCTGGTGCACTGTGTGGTCCCAACTAGGTTGTAATAAATGTATAATGTACATACCGCCCTTTTCCGATTTGACCCACGAAGATNTGGATTAGCCCCTTGTGCACCCATCATTCCCCTGCCTGGTGCGTCACCCTTAGTTTTNTGTATTNTTTGGTTCTTTTGGCCCAAGAATGTTATTCCCTTGTCACGTCCCAGAGAAAAATGTAGTTACCCCCGTATATATCTTTTGTAATGCCCCTGTCATATACACTGTTCTTGGCAGCTGGCCTCTCTGTCCCCACCCCGAAACATCTGGCCGGAACCATCTGACTAATTAAGCTTCTCATTCCCTTCGGTGTT] consensusID : consensus_14240#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 397 fasta sequence [TTGAAGATGTCACACGCGCTTTTTTATGACGAGGAACAGGAATGAGATCTATACTGGCAACAGGCATGGCCTGGT-CATGTGTGGTCCCACTAGGTTGTAATATGTATATGTACATACGCCCTTTTCGATTTGACCAGAAGATTGGATTA-CCCTTGTGCACCATCATCCCCTGCCTGGTGATCACCTTAGTTTTTGTATTTTTGGTCTTTT-GCAAAGAATGTTATTCCCTTGTCAGTCAAGAGAAAAATGTAGTTACCCTGTATATATCTTTTGTAATGCCCTGTCATATACCATGTTCTT-GCAGCTGGCCTCTCTGTCCCAACCACGAAACATCTGGCAGGAACCATCTAACTAATTAAGCTTCTCATTCCTTTCGGTGTTTATTCTAAAAAAAAAA] [+] EMBL BI805144 [TTGAAGATGTCACACGCGCTTTTTTATGACGAGGAACAGGAATGAGATCTATACTGGCAACAGGCATGGCCTGGT CATGTGTGGTCCCACTAGGTTGTAATATGTATATGTACATACGCCCTTTTCGATTTGACCAGAAGATTGGATTA CCCTTGTGCACCATCATCCCCTGCCTGGTGATCACCTTAGTTTTTGTATTTTTGGTCTTTT GCAAAGAATGTTATTCCCTTGTCAGTCAAGAGAAAAATGTAGTTACCCTGTATATATCTTTTGTAATGCCCTGTCATATACCATGTTCTT GCAGCTGGCCTCTCTGTCCCAACCACGAAACATCTGGCAGGAACCATCTAACTAATTAAGCTTCTCATTCCTTTCGGTGTTTATTCTAAAAAAAAAA] [+] EMBL BE228645 [ gaattcggcTCNAT CTGGCNACAGGCATGGGCTGGTGCATGTGTGGTCCAACTAGGTNGTAATATGTATATGTACATACGCCCTTTTCGATTTGACCAGAANATTGGATTAGCCATTGTGCACCATCAACCCCTGCCTGGTGCTCACCTTAATTTTTGTATTTTTGGTCTTTTGGCAAAGAATGTTATTCCCTTGTCAGTCAANAGAAAAATGTAGTTACCCTGTATATATCTTTTGTAATGCCCTGTCATATACCATGTTCTTGGCAGCTGGCCTCTCTGTCCCAACCACGAAACATCTGGCAGGAACCATCTGACTAATTAAGCTTCTCATTCCTTTCGGTGTTTATTCTt ] consensusID : consensus_14240#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 118 fasta sequence [CAGAGGACGAGACAAGGGGTACCATGTTCTTGGCAGCTGGCCTCTCTGTCCCAACCACGAAACATCTGGCAGGAACCATCTAACTAATTAAGCTTCTCAAAAAAAAAAAAAAAAAAAA] [+] EMBL CA767006 [CAGAGGACGAGACAAGGGGTACCATGTTCTTGGCAGCTGGCCTCTCTGTCCCAACCACGAAACATCTGGCAGGAACCATCTAACTAATTAAGCTTCTCAAAAAAAAAAAAAAAAAAA ] [-] EMBL CA761014 [ AGAGGACGAGACAAGGGGTACCATGTTTTTGGCAGCTGGCCTCTCTGTCCCAACCCCGAAACATTTGGCAGGAACCATCTAACTAATTAAGCTTCTCAAAAAAAAAAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14240#3 ------------------------------------------------------------ consensus_14240#4 ------------------------------------------------------------ consensus_14240#2 ------------------------------------------------------------ consensus_14240#0 GCTCCACCCCCTCCTCCTCCTTCGAAACCCTAGCCTCACCACCCCCCGCCACGAGGGAGG 60 consensus_14240#1 ------------------------------------------------------------ consensus_14240#3 ------------------------------------------------------------ consensus_14240#4 ------------------------------------------------------------ consensus_14240#2 ------------------------------------------------------------ consensus_14240#0 AGCGAGCGGCGCAGTGGTGGACGGCGGCGGCGGCGGGATGGAGGGGCCCAAGAGGTCGCA 120 consensus_14240#1 ------------------------------------------------------------ consensus_14240#3 ------------------------------------------------------------ consensus_14240#4 ------------------------------------------------------------ consensus_14240#2 ------------------------------------------------------------ consensus_14240#0 GCTGAGGGTGCGGCTCCGCGTGACGGCGCGGCGGAGGGGCGGCGACGGCGGCGCGGACGG 180 consensus_14240#1 ------------------------------------------------------------ consensus_14240#3 ------------------------------------------------------------ consensus_14240#4 ------------------------------------------------------------ consensus_14240#2 ------------------------------------------------------------ consensus_14240#0 CGGAGGGAGCGGGGGCGGAGGCGGCGGGGCCGGGGGCAGGAAGCGGCTGCTGGACGCGCC 240 consensus_14240#1 ------------------------------------------------------------ consensus_14240#3 ------------------------------------------------------------ consensus_14240#4 ------------------------------------------------------------ consensus_14240#2 ------------------------------------------------------------ consensus_14240#0 GGCCTTCAACTCGGCCGCGAAGCTGCAGCGGCGCGAGATCGGGGGCAGGCAGCTCGCCGC 300 consensus_14240#1 ------------------------------------------------------------ consensus_14240#3 ------------------------------------------------------------ consensus_14240#4 ------------------------------------------------------------ consensus_14240#2 ------------------------------------------------------------ consensus_14240#0 GCGCGGCGGGGGCGCCGCGTCCGCCGTGCCCGAGCGGTTCCGGAACATGCATCTCCAGGA 360 consensus_14240#1 ------------------------------------------------------------ consensus_14240#3 ------------------------------------------------------------ consensus_14240#4 ------------------------------------------------------------ consensus_14240#2 ------------------------------------------------------------ consensus_14240#0 AGAGTTCGATACGTATGATCACAATGCCCACCTATTTGTGAAGCTGCAGTTTCTTAAAAA 420 consensus_14240#1 ------------------------------------------------------------ consensus_14240#3 ------------------------------------------------------------ consensus_14240#4 ------------------------------------------------------------ consensus_14240#2 ------------------------------------------------------------ consensus_14240#0 GAGATCCAAAATAATTGAGATTGTTGCAGCAAAAGATATCATATTTGCTCTTGCGCACTC 480 consensus_14240#1 ------------------------------------------------------------ consensus_14240#3 ------------------------------------------------------------ consensus_14240#4 ------------------------------------------------------------ consensus_14240#2 ------------------------------------------------------------ consensus_14240#0 TGGGTTGTGTGCTGCTTTTAGTCGAGTTACAAATAAGCGCATATCCTTCCTGAATTTAAG 540 consensus_14240#1 ------------------------------------------------------------ consensus_14240#3 ------------------------------------------------------------ consensus_14240#4 ------------------------------------------------------------ consensus_14240#2 ------------------------------------------------------------ consensus_14240#0 CCCAGATGAAGTCATCCGGAGCTTGTTCTACAACAAGAACAATGATTCACTTATTACTGT 600 consensus_14240#1 ------------------------------------------------------------ consensus_14240#3 ------------------------------------------------------------ consensus_14240#4 ------------------------------------------------------------ consensus_14240#2 ------------------------------------------------------------ consensus_14240#0 GTCTGTTTATGCGTCAGACCATTTTAGCACATTGAAGTGCAGAACAACCCCAATCGAGTA 660 consensus_14240#1 ------------------------------------------------------------ consensus_14240#3 ------------------------------------------------------------ consensus_14240#4 ------------------------------------------------------------ consensus_14240#2 ------------------------------------------------------------ consensus_14240#0 TATAAGGAGGAATCAGTTAGATGCTGGGTTTCCTCTTTTTGAAACAGAATCTCTGAAGTG 720 consensus_14240#1 ------------------------------------------------------------ consensus_14240#3 ------------------------------------------------------------ consensus_14240#4 ------------------------------------------------------------ consensus_14240#2 ------------------------------------------------------------ consensus_14240#0 GCCTGGCTTTGTGGAGTTTGATGATGTGAATGGAAAAGTACTCACCTACTCAGCTCAGGA 780 consensus_14240#1 ------------------------------------------------------------ consensus_14240#3 ------------------------------------------------------------ consensus_14240#4 ------------------------------------------------------------ consensus_14240#2 ------------------------------------------------------------ consensus_14240#0 TGGTATCTATAAGGTCTTCGATTTGAAGAATTACTCTTTTCTATATTCAATACCTGACAC 840 consensus_14240#1 ------------------------------------------------------------ consensus_14240#3 ------------------------------------------------------------ consensus_14240#4 ------------------------------------------------------------ consensus_14240#2 ------------------------------------------------------------ consensus_14240#0 CAATGTGCAGGAGATAAAAATAAGTCCAGGAATCATGCTCTTGATATATGAAAGAACACC 900 consensus_14240#1 ------------------------------------------------------------ consensus_14240#3 ------------------------------------------------------------ consensus_14240#4 ------------------------------------------------------------ consensus_14240#2 ------------------------------------------------------------ consensus_14240#0 ATGTCATGTTCCTTTGAAGATATTGTCAATTGAAGATGGAAGACCACTANAATCCTTCAC 960 consensus_14240#1 ------------------------------------------------------------ consensus_14240#3 ------------------------------------------------------------ consensus_14240#4 ------------------------------------------------------------ consensus_14240#2 ------------------------------------------------------------ consensus_14240#0 GCATTTGTTGCACCGTAATAAGAAAATTGATTTTATTGAGCAAATTCAATGAAAGCTCCT 1020 consensus_14240#1 ------------------------------------------------------------ consensus_14240#3 ------------------------------------------------------------ consensus_14240#4 ------------------------------------------------------------ consensus_14240#2 ------------------------------------------------------------ consensus_14240#0 TGTCAAGCAAGAAGATGAGAACCTTCAGATACTTGATGTACGGAGTTCTGAGCTAATTGA 1080 consensus_14240#1 -----------------------------------ATGTACGGAGTTCTGAGCTAATTGA 25 consensus_14240#3 ------------------------------------------------------------ consensus_14240#4 ------------------------------------------------------------ consensus_14240#2 ----------------------------CTCATACGGCAAATCTGAGCCCGGGGTTGATG 32 consensus_14240#0 AGTCAGTGTTACCAAGTTTATGACTCCATCAGCATTCATTTTTCTGTACGAGAACAATCT 1140 consensus_14240#1 AGTCAGTGTACCCAAGTTTATGCCTCCATCAGCATTCATTTTTCTGTACTAGAACAATCT 85 consensus_14240#3 ------------------------------------------------------------ consensus_14240#4 ------------------------------------------------------------ consensus_14240#2 ATGGTACAGTACCTCCCATTGGGTCTATCAACATGAGCGACATTATGACTGGCCAATGCA 92 consensus_14240#0 CTTCTTGACATTCCGAAACAGGACGGTTGCTGTATGGAATTTTCGAGGAGAGCTCGTGAC 1200 consensus_14240#1 CTTCTTGACATTCCGAAACAGGACGGTTGCTGTATGGAATTTTCGAGGAGAGCTCGTGAC 145 consensus_14240#3 ------------------------------------------------------------ consensus_14240#4 ------------------------------------------------------------ consensus_14240#2 TCGCCAAGATTGCTGCTAATGATCCCACCNCTCCGTATTGGCCCTCGCCAAGAATGGTAA 152 consensus_14240#0 CTCATTTGAAGACCATTTGCTTTGGCATCAAGATTGTAGCACCAACAATATCTACATTAC 1260 consensus_14240#1 CTCATTTGAAGACCATTTGCTTTGGCATCAAGATTGTAGCACCAACAATATCTACATTAC 205 consensus_14240#3 ------------------------------------------------------------ consensus_14240#4 ------------------------------------------------------------ consensus_14240#2 CTTCTGAGAGGTCCCCCATTTGGAGCCACCCTTCCCAGAAGCTTCTTGAAGATGTTCACC 212 consensus_14240#0 CAGTGATCAGGATCTGATTATCTCATACTGCAAATCTGAGGCAGGGGTTGATGATGGTAC 1320 consensus_14240#1 CAGTGATCAGGATCTGATTATCTCATACTGCAAATCTGAGGCAGGGGTTGATGATGGTAC 265 consensus_14240#3 -----------------TTGAAGATGTCACACGCGCTTTTTTATGACGAGGAACAGGAAT 43 consensus_14240#4 ------------------------------------------------------------ consensus_14240#2 CGCGCTTTTTTATGACCCGAGGACCCGGAACTGAGATCTATACCTGGCCACACGGCATGG 272 consensus_14240#0 AGTACCTCCAATTGGGTCTATCAACATGAGTGACATTATGACTGGCAAATGCATCGCCAA 1380 consensus_14240#1 AGTACCTCCAATTGGGTCTATCAACATGAGTGACATTATGACTGGCAAATGCATCTCCAA 325 consensus_14240#3 GAGATCTATACTGGCAACAGGCATGGCCTGGTCATGTGTGGTCCCACTAGGTTGTAATAT 103 consensus_14240#4 ------------------------------------------------------------ consensus_14240#2 GNCTGGTGCACTGTGTGGTCCCAACTAGGTTGTAATAAATGTATAATGTACATACCGCCC 332 consensus_14240#0 GATTGCTGCTAATGATCCCACCCTCCGTATTGGCCCTCGCAAGAATGGTAACTCTGAGAG 1440 consensus_14240#1 GATTGCTGCTAATGATCCCACCCTCCGTATTGGCCCTCGCAAGAATGGTAACTTTGAGAG 385 consensus_14240#3 GTATATGTACATACGCCCTTTTCGATTTGACCAGAAGATTGGATTACCCTTGTGCACCAT 163 consensus_14240#4 ------------------------------------------------------------ consensus_14240#2 TTTTCCGATTTGACCCACGAAGATNTGGATTAGCCCCTTGTGCACCCATCATTCCCCTGC 392 consensus_14240#0 GTCCTCAATTTGGAGCACCATTCCAGAAGCTCTTGAAGATGTCACAGCGCTTTTTTATGA 1500 consensus_14240#1 GTCCTCAATTTGGAGCACCATTCCAGAAGCTCTTGAAGATGTCACAGCGCTTCTTTATGA 445 consensus_14240#3 CATCCCCTGCCTGGTGATCACCTTAGTTTTTGTATTTTTGGTCTTTTGCAAAGAATGTTA 223 consensus_14240#4 ------------------------------------------------------------ consensus_14240#2 CTGGTGCGTCACCCTTAGTTTTNTGTATTNTTTGGTTCTTTTGGCCCAAGAATGTTATTC 452 consensus_14240#0 CGAGGACAGGAATGAGATCTATACTGGCAACAGGCATGGGCTGGTGCATGTGTGGTCCAA 1560 consensus_14240#1 CGAGGACAGGAATGAGATCTATACTGGCAACAGGCATGGGCTGGTGCATGTGTGGTCCAA 505 consensus_14240#3 TTCCCTTGTCAGTCAAGAGAAAAATGTAGTTACCCTGTATATATCTTTTGTAATGCCCT- 282 consensus_14240#4 ----------------------------------------------CAGAGGACGAGAC- 13 consensus_14240#2 CCTTGTCACGTCCCAGAGAAAAATGTAGTTACCCCCGTATATATCTTTTGTAATGCCCCT 512 consensus_14240#0 CTAGGTTGTAATATGTATATGTACATACGCCCTTTTCGATTTGAC-CAGAAGATTGGATT 1619 consensus_14240#1 CTAGGTTGTAATATGTATATGTACATACGCCCTTTTCGATTTGAC-CAGAAGATTGGATT 564 * consensus_14240#3 ----GTCATATACCATGTTCT--TG-CAGCTGGCCTCTCTG---TCCCAACCACGAAACA 332 consensus_14240#4 ----AAGGGGTACCATGTTCT--TGGCAGCTGGCCTCTCTG---TCCCAACCACGAAACA 64 consensus_14240#2 ----GTCATATACACTGTTCT--TGGCAGCTGGCCTCTCTG---TCCCCACCCCGAAACA 563 consensus_14240#0 AGCCATTGTGCACCATCATCCCCTGCCTGGTGATCACCTTAGTTTTTGTATTTTTGGTCT 1679 consensus_14240#1 AGCCATTGTGCACCATCATCCCCTGCCTGGTGATCACCTTAGTTTTTGTATTTTTGGTCT 624 ** * ** ** * * ** * * * * * * consensus_14240#3 TCTGGCAGGAACCATC--TAACTAATTAAGCTTCTCATTCCTTTCGGTGTTTATTCTAAA 390 consensus_14240#4 TCTGGCAGGAACCATC--TAACTAATTAAGCTTCTCA-----------AAAAAAAAAAAA 111 consensus_14240#2 TCTGGCCGGAACCATC--TGACTAATTAAGCTTCTCATTCCCTTCGGTGTT--------- 612 consensus_14240#0 TTTGGCAAAGAATGTTATTCCCTTGTCAGTCAAGAGAAAAATGTAGTTACCCTGTATATA 1739 consensus_14240#1 TTTGGCAAAGAATGTTATTCCCTTGTCAGTCAAGAGAAAAATGTAGTTACCCTGTAAAAA 684 * **** * * * ** * * * * consensus_14240#3 AAAAAAA----------------------------------------------------- 397 consensus_14240#4 AAAAAAA----------------------------------------------------- 118 consensus_14240#2 ------------------------------------------------------------ consensus_14240#0 TCTTTTGTAATGCCCTGTCATATACCATGTTCTTGGCAGCTGGCCTCTCTGTCCCAACCA 1799 consensus_14240#1 AAAAAAAA---------------------------------------------------- 692 consensus_14240#3 ---------------------------------------------------------- consensus_14240#4 ---------------------------------------------------------- consensus_14240#2 ---------------------------------------------------------- consensus_14240#0 CGAAACATCTGGCAGGAACCATCTAACTAATTAAGCTTCTCATTCCTAAAAAAAAAAA 1857 consensus_14240#1 ---------------------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||