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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14252#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1242 fasta sequence
[GGCCTTGAGGGTAACCTGTTGACTAGCTTAAATTGTAGCAACAACTAAACAGCTCCATAAAAGGAGGAGCACTTTTTTTCCTCTGCATATCTCCTCTCTTGTCTTCTTCTCTTCTCTCATCTGCTCTCATCATCTCCATTGCAACTTCTCTCTCCATTTGCTGCTCATATCAACTTATCAAAGGGAGGTAGTGCAAGAGGAAGAACAAAACAAGATGTTTTTCCAGAGAAAGAATTCAAAGAAAGTGAAGGACTCCAATGGATCGTCGTCGAAGAAGGACAAAGATAGCCGCGGGAAGAACATTTTCGACAGTGCCAAGGGAGGACTTGGTGCCCTTACAGGAACTCTCCAGACAGCAAAGAATGATGCCGGAGAGAAGGCTGAAAACCTTCAAGATGATGTGAAGACAACCATCGGAGCAATCTTGCGCAGAGGATCTGGTGTTCTTGAGAAAGCCAAAGAGATTGGAGGCCATTCAGAGGCCAGCCAGTCCAAGGAACTAGAGCAAGGAAGTGAAGAACAAGGAAAGAAAGATATGGAAGCCTTAACCAAAGTCATGGACAAGGTCAAGGAAGTGAAGAGTAACCCAGAAGTGGTGGAGAAGCTGGACAAGGTCAAGGAAGACATCAGCAGCCTTGCTCATGCTTTACATCTGGGAAAACATGATAAGGAACATGAATCTGAGGAGAAGGCAAAGGAAGGTGAGACTGCGAAAAGGGCCGACGAGGGCGCCTCTGCCAGCAAGTCTGAAGATTCAGGTGTGGTAGTACAAGCTGTGGAAGAGATTCAGGCCGTTGTCACAGCTGTGCAGCAGCAGCTGCACACAGAAGGAGCTGCAGCTGAAACTCCCAATGAGGCTGCTGCTGCTGAAACTTCAGCAGAAGGAGAGAAGCCTGAAGAATCAAAGAGAGATGTAGAGAAGGATGATCCGTCGAAGCGGCTCGACTTCAAGGGCTTCTTTGCCATGATATTTGAGAGGTGCTGCAACCCTGGGAACAAGAAGAAAGATTAAGCTTGGAAGAAAATGATGTGGATTTTTTTTGTTTTTTTGTTTTTGTGTGTGTGTTCTTGGAGACTGAAGAATGATGTGCATGGGATTGTGGGATGGTGTACAGTTTGCAGTTTGTGTGTTTTCTTCAGAGTTAATTGTCTGCTTTTGGTGTTTTATCCTTTTATGTGTTGATGGATGTATGTCAAAGAGTACTTTGTGAAATTCTTGTTAGCCTTGTGAGCTTGATCTTA]
[+] EMBL CB655670 [GGCCTTGAGGGTAACCTGTTGACTAGCTTAAATTGTAGCAACAACTAAACAGCTCCATAAAAGGAGGAGCACTTTTTTTCCTCTGCATATCTCCTCTCTTGTCTTCTTCTCTTCTCTCATCTGCTCTCATCATCTCCATTGCAACTTCTCTCTCCATTTGCTGCTCATATCAACTTATCAAAGGGAGGTAGTGCAAGAGGAAGAACAAAACAAGATGTTTTTCCAGAGAAAGAATTCAAAGAAAGTGAAGGACTCCAATGGATCGTCGTCGAAGAAGGACAAAGATAGCCGCGGGAAGAACATTTTCGACAGTGCCAAGGGAGGACTTGGTGCCCTTACAGGAACTCTCCAGACAGCAAAGAATGATGCCGGAGAGAAGGCTGAAAACCTTCAAGATGATGTGAAGACAACCATCGGAGCAATCTTGCGCAGAGGATCTGGTGTTCTTGAGAAAGCCAAAGAGATTGGAGGCCATTCAGAGGCCAGCCAGTCCAAGGAACTAGAGCAAGGAAGTGAAGAACAAGGAAAGAAAGATATGGAAGCCTTAACCAAAGTCATGGACAAGGTCAAGGAAGTGAAGAGTAACCCAGAAGTGGTGGAGAAGCTGGACAAGGTCAAGGAAGACATCAGCAGCCTTGCTCATGCTTTACATCTGGGAAAACATGATAAGGAACATGAATCTGAGGAGAAGGCAAAGGAAGGTGAGACTGCGAAAAGGGCCGACGAGGGCGCCTCTGCCAGCAAGTCTGAAGATTCAGGTGTGGTAG ]
[+] EMBL CB655675 [ CATATCTCCTCTCTTGTCTTCTTCTCTTCTCTCATCTGCTCTCATCATCTCCATTGCAACTTCTCTCTCCATTTGCTGCTTATATCAACTTATCAAAGGG AGTGCAAGAGGAAGAACAAAACAAGATGTTTTTCCAGAGAAAGAATTCAAAGAAAGTGAAGGACTCCAATGGATCGTCGTCGAAGAAGGACAAAGATAGCCGCGGGAAGAACATTTTCGACAGTGCCAAGGGAGGACTTGGTGCCCTTACAGGAACTCTCCAGACAGCAAAGAATGATGCCGGAGAGAAGGCTGAAAACCTTCAAGATGATGTGAAGACAACCATCGGAGCAATCTTGCGCAGAGGATCTGGTGTTCTTGAGAAAGCCAAAGAGATTGGAGGCCATTCAGAGGCCAGCCAGTCCAAGGAACTAGAGCAAGGAAGTGAAGAACAAGGAAAGAAAGATATGGAAGCCTTAACCAAAGTCATGGACAAGGTCAAGGAAGTGAAGAGTAACCCAGAAGTGGTGGAGAAGCTGGACAAGGTCAAGGAAGACATCAGCAGCCTTGCTCATGCTTTACATCTGGGAAAACATGATAAGGAACATGAATCTGAGGAGAAGGCAAAGGAAGGTGAGACTGCGAAAAGGGCCGACGAGGGCGCCTCTGCCAGCAAGTCTGAAGATTCAGGTGTGGTAGTACAAGCTGTGGAAGAGATTCAGGCCGTTGTCACAGCTGTGCAGCAGCAGCTGCACACAGAAGGAGCTGCAGCTGAAACTCCCAATGAG ]
[+] EMBL CB656082 [ TCTGCTCTCATCATCTCCATTGCAACTTCTCTCTCCATTTGCTGCTCATATCAACTTATCAAAGGGAGGTAGTGCAAGAGGAAGAACAAAACAAGATGTTTTTCCAGAGAAAGAATTCAAAGAAAGTGAAGGACTCCAATGGATCGTCGTCGAAGAAGGACAAAGATAGCCGCGGGAAGAACATTTTCGACAGTGCCAAGGGAGGACTTGGTGCCCTTACAGGAACTCTCCAGACAGCAAAGAATGATGCCGGAGAGAAGGCTGAAAACCTTCAAGATGATGTGAAGACAACCATCGGAGCAATCTTGCGCAGAGGATCTGGTGTTCTTGAGAAAGCCAAAGAGATTGGAGGCCATTCAGAGGCCAGCCAGTCCAAGGAACTAGAGCAAGGAAGTGAAGAACAAGGAAAGAAAGATATGGAAGCCTTAACCAAAGTCATGGACAAGGTCAAGGAAGTGAAGAGTAACCCAGAAGTGGTGGAGAAGCTGGACAAGGTCAAGGAAGACATCAGCAGCCTTGCTCATGCTTTACATCTGGGAAAACATGATAAGGAACATGAATCTGAGGAGAAGGCAAAGGAAGGTGAGACTGCGAAAAGGGCCGACGAGGGCGCCTCTGCCAGCAAGTCTGAAGATTCAGGTGTGGTAGTACAAGCTGTGGAAGAGATTCANGCCGTTGTCACAGCTGTGCAGCAGCA ]
[-] EMBL CB655671 [ TTGGAGGCCATTCAGAGGCCAGCCAGTCCAAGGAACTAGAGCAAGGAAGTGAAGAACAAGGAAAGAAAGATATGGAAGCCTTAACCAAAGTCATGGACAAGGTCAAGGAAGTGAAGAGTAACCCAGAAGTGGTGGAGAAGCTGGACAAGGTCAAGGAAGACATCAGCAGCCTTGCTCATGCTTTACATCTGGGAAAACATGATAAGGAACATGAATCTGAGGAGAAGGCAAAGGAAGGTGAGACTGCGAAAAGGGCCGACGAGGGCGCCTCTGCCAGCAAGTCTGAAGATTCAGGTGTGGTAGTACAAGCTGTGGAAGAGATTCAGGCCGTTGTCACAGCTGTGCAGCAGCAGCTGCACACAGAAGGAGCTGCAGCTGAAACTCCCAATGAGGCTGCTGCTGCTGAAACTTCAGCAGAAGGAGAGAAGCCTGAAGAATCAAAGAGAGATGTAGAGAAGGATGATCCGTCGAAGCGGCTCGACTTCAAGGGCTTCTTTGCCATGATATTTGAGAGGTGCTGCAACCCTGGGAACAAGAAGAAAGATTAAGCTTGGAAGAAAATGATGTGGATTTTTTTTGTTTTTTTGTTTTTGTGTGTGTGTTCTTGGAGACTGAAGAATGATGTGCATGGGATTGTGGGATGGTGTACAGTTTGCAGTTTGTGTGTTTTCTTCAGAGTTAATTGTCTGCTTTTGGTGTTTTATCCTTTTATGTGTTGATGGATGTATGTCAAAGAGTACTTTGTGAAATTCTTGTTAGCCTTGTGAGCTTGATCTTA]
[-] EMBL CB655674 [ GAGGCCAGCCAGTCCAAGGTACTAGAGCAAGGAAGTGAAGAACAAGGAAAGAAAGATATGGAAGCTTTAACCAAAGTCATGGACAAGGTCAAGGAAGTGAAGAGTAACCCAGAAGTGGTGGAGAAGCTGGACAAGGTCAAGGAAGACATCAGCAGCCTTGCTCATGCTTTACATCTGGGAAAACATGATAAGGAACATGAATCTGAGGAGAAGGCAAAGGAAGGTGAGACTGCGAAAAGGGCCGACGAGGGCGCCTCTGCCAGCAAGTCTGAAGATTCAGGTGTGGTAGTACAAGCTGTGGAAGAGATTCAGGCCGTTGTCACAGCTGTGCAGCAGCAGCTGCACACAGAAGGAGCTGCAGCTGAAACTCCCAATGAGGCTGCTGCTGCTGAAACTTCAGCAGAAGGAGAGAAGCCTGAAGAATCAAAGAGAGATGTAGAGAAGGATGATCCGTCGAAGCGGCTCGACTTCAAGGGCTTCTTTGCCATGATATTTGAGAGGTGCTGCAACCCTGGGAACAAGAAGAAAGATTAAGCTTGGAAGAAAATGATGTGGATTTTTTTTGTTTTTTTGTTTTTGTGTGTGTGTTCTTGGAGACTGAAGAATGATGTGCATGGGATTGTGGGATGGTGTACAGTTTGCAGTTTGTGTGTTTTCTTCAGAGTTAATTGTCTGCTTTTGGTGTTTTATCCTTTTATGTGTTGATGGATGTATGTCAAAGAGTACTTTGTGAAATTCTTGTTAGCCTTGTGAGCTTGATCTTA]
[-] EMBL CB656083 [ AAGAACAGGGAAAGAAAGATATGGAAGCCTTAACCAAAGTCATGGACAAGGTCAAGGAAGTGAAGAGTAACCCAGAAGTGGTGGAGAAGCTGGACAAGGTCAAGGAAGACATCAGCAGCCTTGCTCATGCTTTACATCTGGGAAAACATGATAAGGAACATGAATCTGAGGAGAAGGCAAAGGAAGGTGAGACTGCGAAAAGGGCCGACGAGGGCGCCTCTGCCAGCAAGTCTGAAGATTCAGGTGTGGTAGTACAAGCTGTGGAAGAGATTCAGGCCGTTGTCACAGCTGTGCAGCAGCAGCTGCACACAGAAGGAGCTGCAGCTGAAACTCCCAATGAGGCTGCTGCTGCTGAAACTTCAGCAGAAGGAGAGAAGCCTGAAGAATCAAAGAGAGATGTAGAGAAGGATGATCCGTCGAAGCGGCTCGACTTCAAGGGCTTCTTTGCCATGATATTTGAGAGGTGCTGCAACCCTGGGAACAAGAAGAAAGATTAAGCTTGGAAGAAAATGATGTGGATTTTTTTTGTTTTTTTGTTTTTGTGTGTGTGTTCTTGGAGACTGAAGAATGATGTGCATGGGATTGTGGGATGGTGTACAGTTTGCAGTTTGTGTGTTTTCTTCAGAGTTAATTGTCTGCTTTTGGTGTTTTATCCTTTTATGTGTTGATGGATGTATGTCAAAGAGTACTTTGTGAAATTCTTGTTAGCCTTGTGAGCTTGATCTTA]
[-] EMBL CF335930 [ GTGTGGTAGTACAAGCTGTGGAAGAGATTCAGGCCGTTGTCACAGCTGTGCAGCAGCAGCTGCACACAGAAGGAGCTGCAGCTGAAACTCCCAATGAGGCTGCTGCTGCTGAAACTTCAGCAGAAGGAGAGAAGCCTGAAGAATCAAAGAGAGATGTAGAGAAGGATGATCCGTCGAAGCGGCTCGACTTCAAGGGCTTCTTTGCCATGATATTTGAGAGGTGCTGCAACCCTGGGAACAAGAAGAAAGATTAAGCTTGGAAGAAAATGATGTGGATTTTTTTTGTTTTTTTGTTTTTGTGTGTGTGTTCTTGGAGACTGAAGAATGATGTGCATGGGATTGTGGGATGGTGTACAGTTTGCAGTTTGTGTGTTTTCTTCAGAGTTAATTGTCTGCTTTTGGTGTTTTATCCTTTTATGTGTTGATGGATGTATGTCAAAGAGTACTTTGTGAAATTCTTGTTAGCCTTGTGAGCTTGATCTTA]
consensusID : consensus_14252#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 958 fasta sequence
[TTCGCCCTTGGACCTGACTGGACTGAAGGAGTGAAAATCCGATAAGGGGCTCCATTAGTGCACCTATACAGAGACCCGAAACCAACAGCTCAGAATTTCTCAGTCTTCTCGTTCACATTGAAAGCTTGAAGCTTTCAGTCTTCTCTTCTGCAGCTCTGCTTAGCTTCCCCTGATTATCCCAAAGCTTCAGTTCCATCCAATCAGCAGCTTTGAACTGAGCAAGGAAGTGAAGAACAAGGAAAGAAAGATATGGAAGCCTTAACCAAAGTCATGGACAAGGTCAAGGAAGTGAAGAGTAACCCAGAAGTGGTGGAGAAGCTGGACAAGGTCAAGGAAGACATCAGCAGCCTTGCTCATGCTTTACATCTGGGAAAACATGATAAGGAACATGAATCTGAGGAGAAGGCAAAGGAAGGTGAGACTGCGAAAAGGGCCGACGAGGGCGCCTCTGCCAGCAAGTCTGAAGATTCAGGTGTGGTAGTACAAGCTGTGGAAGAGATTCAGGCCGTTGTCACTGCTGTGCAGCAGCAGCTGCACACAGAAGGAGCTGCAGCTGAAACTCCCAATGAGGCTGCTGCTGCTGAAACTTCAGCAGAAGGAGAGAAGCCTGAAGAATCAAAGAGAGATGTAGAGAAGGATGATCCGTCGAAGCGGCTCGACTTCAAGGGCTTCTTTGCCATGATATTTGAGAGGTGCTGCAACCCTGGGAACAAGAAGAAAGATTAAGCTTGGAAGAAAATGAT-CTGGATTTTTTTTGGTTTTTTGGTTTTTGNGNGTGTGTTCTTGGAGACTGAAGAATGATGTGCATGGGATTGTGGGATGGTGTACAGNTTGCAGNTTGNGTGNGNTCTTCAGAGTTAATTGNCTGCTTTTTGGGGGTTTATCCTTTTATGNGNTGATGGGATGTATGTCAAANAGTACTTTGGGAAATTCTTGTTAGCCTTGTGAGCTTGATCTT]
[+] EMBL CF335929 [TTCGCCCTTGGACCTGACTGGACTGAAGGAGTGAAAATCCGATAAGGGGCTCCATTAGTGCACCTATACAGAGACCCGAAACCAACAGCTCAGAATTTCTCAGTCTTCTCGTTCACATTGAAAGCTTGAAGCTTTCAGTCTTCTCTTCTGCAGCTCTGCTTAGCTTCCCCTGATTATCCCAAAGCTTCAGTTCCATCCAATCAGCAGCTTTGAACTGAGCAAGGAAGTGAAGAACAAGGAAAGAAAGATATGGAAGCCTTAACCAAAGTCATGGACAAGGTCAAGGAAGTGAAGAGTAACCCAGAAGTGGTGGAGAAGCTGGACAAGGTCAAGGAAGACATCAGCAGCCTTGCTCATGCTTTACATCTGGGAAAACATGATAAGGAACATGAATCTGAGGAGAAGGCAAAGGAAGGTGAGACTGCGAAAAGGGCCGACGAGGGCGCCTCTGCC ]
[+] EMBL CB096602 [ GGGGCTCCATTAGTGCACCTATACAGAGACCCGAAACCAACAGCTCAGAATTTCTCAGTCTTCTCGTTCACATTGAAAGCTTGAAGCTTTCAGTCTTCTCTTCTGCAGCTCTGCTTAGCTTCCCCTGATTATCCCAAAGCTTCAGTTCCATCCAATCAGCAGCTTTGAACTGAGCAAGGAAGTGAAGAACAAGGAAAGAAAGATATGGAAGCCCTCACCAAAGTCATGGACAAGGTCAAGGAAGTGAAGAGCAACCCAGAAGTGGTGGAGAAGCTGGACAAGGTCAAGGAAGACATCAGCAGCCTTGCTCATGCTTTGCATCTGGGAAAACATGATAAGGAACATGAATCTGAGGAGAAGGCAAAGGAAGGTGAGACTGCGAAAAGCGCCGACGAGGGCGCCTCTGCCAGCAAGTCTGAAGATTCAGGTGTGGTAGTACAAGCTGTGGAAGAGATTCAGGCCGTTGTCACTGCTGTGCAGCAGCAGCTGCACACAGAAGGAGCTGCAGCTGAAACTCCCAATGAGGCTGCTGCTGCTGAAACTTCAGCAGAAGGAGAGAAGCCTGAAGAATCAAAGAGAGATGTAGAGAAGGATGATCCGTCGAAGCGGCTCGACTTCAAGGGCTTCTTTGCCATGATATTTGAGAGGTGCTGCAACCCTGGGAACAAGAAGAAAGATTAAGCTTGGAAGAAAATGATCCTGG ]
[+] EMBL OSS14581A [ CACCTATACAGAGACCCGAAACCAACAGCTCAGAATTTCTCAGTCTTCTCGTTCACATTGAAAGCTTGAAGCTTTCAGTCTTCTCTTCTGCAGCTCTGCTTAGCTTCCCCTGATTATCCCAAAGCTTCAGTTCCATCCAATCAGCAGCTTTGAACTGAGCAAGGAAGTNAAGAACAAGGAAAGAAAGATATGGAAGCCTTAACCAAAGTCATGGACAAGGTCAAGGAAGTNAAGAGTAACCCAGAAGTGGTGGAGAAGCTGGACAAGGTCAAGGAAGACATCAGCAGCCTTGCTCATGCTTTACATCTGGGNAAACATGATAAGGga ]
[+] EMBL CA763141 [ TCAGTCTTCTCGTTCACATTGAAAGCTTGAAGCTTTCAGTCTTCTCTTCTGCAGCTCTGCTTAGCTTCCCCTGATTATCCCAAAGCTTCAGTTCCATCCAATCAGCAGCTTTGAACTGAGCAAGGAAGTGAAGAACAAGGAAAGAAAGATATGGAAGCCTTAACCAAAGTCATGGACAAGGTCAAGGAAGTGAAGAGTAACCCAGAAGTGGTGGAGAAGCTGGACAAGGTCAAGGA ]
[+] EMBL CA753625 [ TCAGTCTTCTCGTTCACATTGAAAGCTTGAAGCTTTCAGTCTTCTCTTCTGCAGCTCTGCTTAGCTTCCCCTGATTATCCCAAAGCTTCAGTTCCATCCAATCAGCAGCTTTGAACTGAGCAAGGAAGTGAAGAACAAGGAAAGAAAGATATGGAAGCCTTAACCAAAGTCATGGACAAGGTCAAGGAAGTGAAGAGTAACCCAGAAGTGGTGGAGAAGCTGGACAAGGTCAAGGA ]
[+] EMBL CB097178 [ TCGTTCACATTGAAAGCTTGAAGCTTTCAGTCTTCTCTTCTGCAGCTCTGCTTAGCTTCCCCTGATTATCCCAAAGCTTCAGTTCCATCCAATCGGCAGCTTTGAACTGAGCAAGGAAGTGAAGAACAAGGAAAGAAAGATATGGAAGCCCTCACCAAAGTCATGGACAAGGTCAAGGAAGTGAAGAGCAACCCAGAAGTGGTGGAGAGGCTGGACAAGGTCAAGGAAGACATCAGCAGCCTTGCTCATGCTTTGCATCTGGGAAAACATGATAAGGAACATGAATCTGAGGAGAAGGCAAAGGAAGGTGAGACTGCGAAAAGCGCCGACGAGGGCGCCTCTGCCAGCAAGTCTGAAGATTCAGGTGTGGTAGTACAAGCTGTGGAAGAGATTCAGGCCGTTGTCACTGCTGTGCAGCAGCAGCTGCACACAGAAGGAGCTGCAGCTGAAACTCCCAATGAGGCTGCTGCTGCTGAAACTTCAGCAGAAGGAGAGAAGCCTGAAGAATCAAAGAGAGATGTAGAGAAGGATGATCCGTCGAAGCGGCTCGACTTCAAGGGCTTCTTTGCCATGATATTTGAGAGGTGCTGCAACCCTGGGAACAAGAAGAAAGATTAAGCTTGGAAGAAAATGAT CTGGATTTTTTTTGGTTTTTTGGTTTTTGNGNGTGTGTTCTTGGAGACTGAAGAATGATGTGCATGGGATTGTGGGATGGTGTACAGNTTGCAGNTTGNGTGNGNTCTTCAGAGTTAATTGNCTGCTTTTTGGGGGTTTATCCTTTTATGNGNTGATGGGATGTATGTCAAANAGTACTTTGG ]
[+] EMBL AK068093 [ CGTTCACATTGAAAGCTTGAAGCTTTCAGTCTTCTCTTCTGCAGCTCTGCTTAGCTTCCCCTGATTATCCCAAAGCTTCAGTTCCATCCAATCAGCAGCTTTGAACTGAGCAAGGAAGTGAAGAACAAGGAAAGAAAGATATGGAAGCCTTAACCAAAGTCATGGACAAGGTCAAGGAAGTGAAGAGTAACCCAGAAGTGGTGGAGAAGCTGGACAAGGTCAAGGAAGACATCAGCAGCCTTGCTCATGCTTTACATCTGGGAAAACATGATAAGGAACATGAATCTGAGGAGAAGGCAAAGGAAGGTGAGACTGCGAAAAGGGCCGACGAGGGCGCCTCTGCCAGCAAGTCTGAAGATTCAGGTGTGGTAGTACAAGCTGTGGAAGAGATTCAGGCCGTTGTCACAGCTGTGCAGCAGCAGCTGCACACAGAAGGAGCTGCAGCTGAAACTCCCAATGAGGCTGCTGCTGCTGAAACTTCAGCAGAAGGAGAGAAGCCTGAAGAATCAAAGAGAGATGTAGAGAAGGATGATCCGTCGAAGCGGCTCGACTTCAAGGGCTTCTTTGCCATGATATTTGAGAGGTGCTGCAACCCTGGGAACAAGAAGAAAGATTAAGCTTGGAAGAAAATGAT GTGGATTTTTTTT GTTTTTTTGTTTTTGTGTGTGTGTTCTTGGAGACTGAAGAATGATGTGCATGGGATTGTGGGATGGTGTACAGTTTGCAGTTTGTGTGTTTTCTTCAGAGTTAATTGTCTGC TTTTGGTGTTTTATCCTTTTATGTGTTGAT GGATGTATGTCAAAGAGTACTTTGTGAAATTCTTGTTAGCCTTGTGAGCTTGATCTT]
consensusID : consensus_14252#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 605 fasta sequence
[ACATCAGCAGCCTTGCTCATGCTTTACATCTGGGAAAACATGATANGGAACATGAATCTGAGGAGAAGGCAAAGGAAGGTGAGACTGCGAAAAGGGCCGACGAGGGCGCCTCTGCCAGCAAGTCTGAAGATTCAGGTGTGGTAGTACAAGCTGTGGAAGAGATTCAGGCCGTTGTCACAGCTGTGCAGCAGCAGCTGCACACAGAAGGAGCTGCAGCTGAAACTCCCAATGAGGCTGCTGCTGCTGAAACTTCAGCAGAAGGAGAGAAGCCTGAAGAATCAAAGAGAGATGTAGAGAAGGATGATCCGTCGAAGCGGCTCGACTTCAAGGGCTTCTTTGCCATGATATTTGAGAGGTGCTGCAACCCTGGGAACAAGAAGAAAGATTAAGCTTGGAAGAAAATGATGTGGATTTTTNTTGTTTTTTTGTTTTTGTGTGTGTGTTCTTGGAGACTGAAGAATGATGTGCATGGGATTGTGGGATGGTGTACAGTTTGCAGTTTGTGTGTTTTCTTCAGAGTTAATTGTCTGCTTTTGGTGTTTTATCCTTTTATGTGTTGATGGATGTATGTCAAAGAGTACTTTGTGAAATTCTAAAAAAAAAAA]
[+] EMBL AU096639 [ACATCAGCAGCCTTGCTCATGCTTTACATCTGGGAAAACATGATANGGAACATGAATCTGAGGAGAAGGCAAAGGAAGGTGAGACTGCGAAAAGGGCCGACGAGGGCGCCTCTGCCAGCAAGTCTGAAGATTCAGGTGTGGTAGTACAAGCTGTGGAAGAGATTCAGGCCGTTGTCACAGCTGTGCAGCAGCAGCTGCACACAGAAGGAGCTGCAGCTGAAACTCCCAATGAGGCTGCTGCTGCTGAAACTTCAGCAGAAGGAGAGAAGCCTGAAGAATCAAAGAGAGATGTAGAGAAGGATGATCCGTCGAAGCGGCTCGACTTCAAGGGCTTCTTTGCCATGATATTTGAGAGGTGCTGCAACCCTGGGAACAAGAAGAAAGATTAAGCTTGGAAGAAAATGATGTGGATTTTTNTTGTTTTTTTGTTTTTGTGTGTGTGTTCTTGGAGACTGAAGAATGATGTGCATGGGATTGTGGGATGGTGTACAGTTTGCAGTTTGTGTGTTTTCTTCAGAGTTAATTGTCTGCTTTTGGTGTTTTATCCTTTTATGTGTTGATGGATGTATGTCAAAGAGTACTTTGTGAAATTCTAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14252#0 GGCCTTGAGGGTAACCTGTTGACTAGCTTAAATTGTAGCAACAACTAAACAGCTCCATAA 60
consensus_14252#2 ------------------------------------------------------------
consensus_14252#1 ------------------------------------------------------------
consensus_14252#0 AAGGAGGAGCACTTTTTTTCCTCTGCATATCTCCTCTCTTGTCTTCTTCTCTTCTCTCAT 120
consensus_14252#2 ------------------------------------------------------------
consensus_14252#1 ------------------------------------------------------------
consensus_14252#0 CTGCTCTCATCATCTCCATTGCAACTTCTCTCTCCATTTGCTGCTCATATCAACTTATCA 180
consensus_14252#2 ------------------------------------------------------------
consensus_14252#1 ------------------------------------------------------------
consensus_14252#0 AAGGGAGGTAGTGCAAGAGGAAGAACAAAACAAGATGTTTTTCCAGAGAAAGAATTCAAA 240
consensus_14252#2 ------------------------------------------------------------
consensus_14252#1 ------------------------------------------------------------
consensus_14252#0 GAAAGTGAAGGACTCCAATGGATCGTCGTCGAAGAAGGACAAAGATAGCCGCGGGAAGAA 300
consensus_14252#2 ------------------------------------------------------------
consensus_14252#1 ---------------------------TTCGCCCTTGGACCTGACTGGACTGAAGGAGTG 33
consensus_14252#0 CATTTTCGACAGTGCCAAGGGAGGACTTGGTGCCCTTACAGGAACTCTCCAGAC-AGCAA 359
consensus_14252#2 ------------------------------------------------------------
consensus_14252#1 AAAATCCGATA-----AGGGGCTCCATTAGTGCACCTATACAGAGACCCGAAACCAACAG 88
consensus_14252#0 AGAATGATGCCGGAGAGAAGGCTGAAAACCTTCAAGATGATGTGAAGACAACCATCGGAG 419
consensus_14252#2 ------------------------------------------------------------
consensus_14252#1 CTCAGAATTTCTCAG-------TCTTCTCGTTCACATTGAAAGCTTGA-AGCTTTCAGTC 140
consensus_14252#0 CAATCTTGCGCAGAGGATCTGGTGTTCTTGAGAAAGCCAAAGAGATTGGAGGCCATTCAG 479
consensus_14252#2 ------------------------------------------------------------
consensus_14252#1 TTCTCTTCTGCAGCTCTGCTTAGCTTCCCCTGATTATCCCAAAGCTTCAGTTCCATCCAA 200
consensus_14252#0 AGGCCAGCCAGTCCAAGGAACTAGAGCAAGGAAGTGAAGAACAAGGAAAGAAAGATATGG 539
consensus_14252#2 ------------------------------------------------------------
consensus_14252#1 ---TCAGCAGCTTT---GAACT-GAGCAAGGAAGTGAAGAACAAGGAAAGAAAGATATGG 253
consensus_14252#0 AAGCCTTAACCAAAGTCATGGACAAGGTCAAGGAAGTGAAGAGTAACCCAGAAGTGGTGG 599
consensus_14252#2 ------------------------------------------------------------
consensus_14252#1 AAGCCTTAACCAAAGTCATGGACAAGGTCAAGGAAGTGAAGAGTAACCCAGAAGTGGTGG 313
consensus_14252#0 AGAAGCTGGACAAGGTCAAGGAAGACATCAGCAGCCTTGCTCATGCTTTACATCTGGGAA 659
consensus_14252#2 ------------------------ACATCAGCAGCCTTGCTCATGCTTTACATCTGGGAA 36
consensus_14252#1 AGAAGCTGGACAAGGTCAAGGAAGACATCAGCAGCCTTGCTCATGCTTTACATCTGGGAA 373
************************************
consensus_14252#0 AACATGATAAGGAACATGAATCTGAGGAGAAGGCAAAGGAAGGTGAGACTGCGAAAAGGG 719
consensus_14252#2 AACATGATANGGAACATGAATCTGAGGAGAAGGCAAAGGAAGGTGAGACTGCGAAAAGGG 96
consensus_14252#1 AACATGATAAGGAACATGAATCTGAGGAGAAGGCAAAGGAAGGTGAGACTGCGAAAAGGG 433
********* **************************************************
consensus_14252#0 CCGACGAGGGCGCCTCTGCCAGCAAGTCTGAAGATTCAGGTGTGGTAGTACAAGCTGTGG 779
consensus_14252#2 CCGACGAGGGCGCCTCTGCCAGCAAGTCTGAAGATTCAGGTGTGGTAGTACAAGCTGTGG 156
consensus_14252#1 CCGACGAGGGCGCCTCTGCCAGCAAGTCTGAAGATTCAGGTGTGGTAGTACAAGCTGTGG 493
************************************************************
consensus_14252#0 AAGAGATTCAGGCCGTTGTCACAGCTGTGCAGCAGCAGCTGCACACAGAAGGAGCTGCAG 839
consensus_14252#2 AAGAGATTCAGGCCGTTGTCACAGCTGTGCAGCAGCAGCTGCACACAGAAGGAGCTGCAG 216
consensus_14252#1 AAGAGATTCAGGCCGTTGTCACTGCTGTGCAGCAGCAGCTGCACACAGAAGGAGCTGCAG 553
********************** *************************************
consensus_14252#0 CTGAAACTCCCAATGAGGCTGCTGCTGCTGAAACTTCAGCAGAAGGAGAGAAGCCTGAAG 899
consensus_14252#2 CTGAAACTCCCAATGAGGCTGCTGCTGCTGAAACTTCAGCAGAAGGAGAGAAGCCTGAAG 276
consensus_14252#1 CTGAAACTCCCAATGAGGCTGCTGCTGCTGAAACTTCAGCAGAAGGAGAGAAGCCTGAAG 613
************************************************************
consensus_14252#0 AATCAAAGAGAGATGTAGAGAAGGATGATCCGTCGAAGCGGCTCGACTTCAAGGGCTTCT 959
consensus_14252#2 AATCAAAGAGAGATGTAGAGAAGGATGATCCGTCGAAGCGGCTCGACTTCAAGGGCTTCT 336
consensus_14252#1 AATCAAAGAGAGATGTAGAGAAGGATGATCCGTCGAAGCGGCTCGACTTCAAGGGCTTCT 673
************************************************************
consensus_14252#0 TTGCCATGATATTTGAGAGGTGCTGCAACCCTGGGAACAAGAAGAAAGATTAAGCTTGGA 1019
consensus_14252#2 TTGCCATGATATTTGAGAGGTGCTGCAACCCTGGGAACAAGAAGAAAGATTAAGCTTGGA 396
consensus_14252#1 TTGCCATGATATTTGAGAGGTGCTGCAACCCTGGGAACAAGAAGAAAGATTAAGCTTGGA 733
************************************************************
consensus_14252#0 AGAAAATGATGTGGATTTTTTTTGTTTTTTTG-TTTTTGTGTGTGTGTTCTTGGAGACTG 1078
consensus_14252#2 AGAAAATGATGTGGATTTTTNTTGTTTTTTTG-TTTTTGTGTGTGTGTTCTTGGAGACTG 455
consensus_14252#1 AGAAAATGATCTGGATTTTTTTTGGTTTTTTGGTTTTTGNGNGTGTGTTCTTGGAGACTG 793
********** ********* *** ******* ****** * ******************
consensus_14252#0 AAGAATGATGTGCATGGGATTGTGGGATGGTGTACAGTTTGCAGTTTGTGTGTTTTCTTC 1138
consensus_14252#2 AAGAATGATGTGCATGGGATTGTGGGATGGTGTACAGTTTGCAGTTTGTGTGTTTTCTTC 515
consensus_14252#1 AAGAATGATGTGCATGGGATTGTGGGATGGTGTACAGNTTGCAGNTTGNGTGNGNTCTTC 853
************************************* ****** *** *** *****
consensus_14252#0 AGAGTTAATTGTCTGCTTTT-GGTGTTTTATCCTTTTATGTGTTGATGG-ATGTATGTCA 1196
consensus_14252#2 AGAGTTAATTGTCTGCTTTT-GGTGTTTTATCCTTTTATGTGTTGATGG-ATGTATGTCA 573
consensus_14252#1 AGAGTTAATTGNCTGCTTTTTGGGGGTTTATCCTTTTATGNGNTGATGGGATGTATGTCA 913
*********** ******** ** * ************** * ****** **********
consensus_14252#0 AAGAGTACTTTGTGAAATTCTTGTTAGCCTTGTGAGCTTGATCTTA 1242
consensus_14252#2 AAGAGTACTTTGTGAAATTCTAAAAAAAAAAA-------------- 605
consensus_14252#1 AANAGTACTTTGGGAAATTCTTGTTAGCCTTGTGAGCTTGATCTT- 958
** ********* ******** *
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||