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Oryza sativa
cluster # 14277 cluster # 14277       Sequences # 15       consensus # 6


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_14277#0 length = 1655 sequences # 3  
consensus_14277#1 length = 1574 sequences # 1  
consensus_14277#2 length = 1203 sequences # 8  
consensus_14277#3 length = 801 sequences # 1  
consensus_14277#4 length = 326 sequences # 1  
consensus_14277#5 length = 318 sequences # 1  

consensusID : consensus_14277#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1655
fasta sequence
                              [GAGGGGATCACACCTTTCTCTCGCTTTCTCTCTCGTTTGCGAGCGGCGGCGCGGGCGCTCGAGCTGACGGTCGGTAGAGACGGCGCCGGGCATCTGGAGGGTGTTACACCGGGAGGGGGGGAGGTGGCCGCCGGCATGGGGAGTGGCCGCCGGCGTGCTGTAGAGTTTCAATTAACAATTATTGGCTGTTTGGGATCCTGTTTGCTCACTGTTTGGGATTTTTTTTTGTTGTTTGTTTGCAGGTTTGGAGGCTGATCTAGTGAGATTGTTTTTCAACGGACCGCTTCCTGTGTTGTCAAGATGGATCAAAGGAGCAGGCTTTTAATTTTTGCTGCTGCTGCAAACATGTTAGTGTCGATGATGGCCCTTATTATTGAGTCTAGAAATAGGAGAGTGCCAAGGAGAGTAGGAATAACATATGGCCCATTAGTTGAAAGGGATAGAAAGATAAGTGAACACCTCGATGACCTCATTTGGAGAAATGATATAACTTGTATCAACATGCTTAGACTTAGAAAATCATCTTTCTTTCGATTTTGTAAACTTTTTAGAGATCGTGGCTTGCTTGAAGATACCATCAACGTGTGTGTTGAGGAACAAGTTGCTATGTTTTTACATACAATTGGACACAATCTTAGAAATAGGGTAGTTGGTGCTACTTTCCGTAGGTCAGGAGAAATAGTTAGTCGATATTTTAATTTGGTACTTCATGCGGTTGGAGAGTTATGAAATGATCTTATCAAGCCCCCATCTTTGGACATCGCACCTAAAATAGCAGGCAACCACAGATGGGATCCATACATTAAGGATTGTATTGGAGCTATTGATGGCACACATGTTAGAGCATCTGTCCCAAAGAACATGGAGTCGTCTTTTCGTGGTAGGAAGAATCATGCTACACAAAATGTAATGGCAGCAGTAGATTTTGATCTTCGGTTCACATATGTGTTGGCTGGTTGGGAGGGGGCTGCACATGATGTTGTAGTTTTAAGAGATGCTTTGGAACGTGAAAATGGTCTTCATGTCCCCCAAGGAAAATTCTACCTAGTTGATGTTGGATACGGAGCCAAACCGGGATTTTTGCCACCCTTTAGAAGCACCCGGTATCATCTAAATGAGTGGGGAAACAATCCGGTCCAAAATGAGAAGGAGTTGTTCAACCTTAGACACTCATCCCTTCGTATCACTGTTGAACGTGCATTTGGGTCACTGAAGAGGAGGTTCAAAATTCTTGATGATGCCACACCATTTTTCCCCTTTCAGACTCAAGTAAACATTGTTGTAGCTTGTTGTATTATTCATAATTGGGTGATAAATGATGATATTGATGAGCTTGTGATGGGCCCAAATGAGTCCATAATTCAAGACAACGATACTTCTACGGTTGGCCAACCAAACGACCACGCATGGATGGTTCAATTTAGGCAAGGACTTGCAGATCAGATGTGGGCCGATCGTCAAAATCACCATGGAAACTAAATTGTGCTTGTACTATTTAGCATTTCAAAAACATGTTTGCATTCCTTTGTGTGGATGTATTGTCAAGACTAAATTTATTTGTAGTTGTACTATTTGTATGGACTACTTGTATGATGAATTTAAATTGTACGAACATATGTATTGATGTATTACTCTTGAATGAAAAAAAAAAAAAA]

[+] EMBL AK066005             [GAGGGGATCACACCTTTCTCTCGCTTTCTCTCTCGTTTGCGAGCGGCGGCGCGGGCGCTCGAGCTGACGGTCGGTAGAGACGGCGCCGGGCATCTGGAGGGTGTTACACCGGGAGGGGGGGAGGTGGCCGCCGGCATGGGGAGTGGCCGCCGGCGTGCTGTAGAGTTTCAATTAACAATTATTGGCTGTTTGGGATCCTGTTTGCTCACTGTTTGGGATTTTTTTTTGTTGTTTGTTTGCAGGTTTGGAGGCTGATCTAGTGAGATTGTTTTTCAACGGACCGCTTCCTGTGTTGTCAAGATGGATCAAAGGAGCAGGCTTTTAATTTTTGCTGCTGCTGCAAACATGTTAGTGTCGATGATGGCCCTTATTATTGAGTCTAGAAATAGGAGAGTGCCAAGGAGAGTAGGAATAACATATGGCCCATTAGTTGAAAGGGATAGAAAGATAAGTGAACACCTCGATGACCTCATTTGGAGAAATGATATAACTTGTATCAACATGCTTAGACTTAGAAAATCATCTTTCTTTCGATTTTGTAAACTTTTTAGAGATCGTGGCTTGCTTGAAGATACCATCAACGTGTGTGTTGAGGAACAAGTTGCTATGTTTTTACATACAATTGGACACAATCTTAGAAATAGGGTAGTTGGTGCTACTTTCCGTAGGTCAGGAGAAATAGTTAGTCGATATTTTAATTTGGTACTTCATGCGGTTGGAGAGTTATGAAATGATCTTATCAAGCCCCCATCTTTGGACATCGCACCTAAAATAGCAGGCAACCACAGATGGGATCCATACATTAAGGATTGTATTGGAGCTATTGATGGCACACATGTTAGAGCATCTGTCCCAAAGAACATGGAGTCGTCTTTTCGTGGTAGGAAGAATCATGCTACACAAAATGTAATGGCAGCAGTAGATTTTGATCTTCGGTTCACATATGTGTTGGCTGGTTGGGAGGGGGCTGCACATGATGTTGTAGTTTTAAGAGATGCTTTGGAACGTGAAAATGGTCTTCATGTCCCCCAAGGAAAATTCTACCTAGTTGATGTTGGATACGGAGCCAAACCGGGATTTTTGCCACCCTTTAGAAGCACCCGGTATCATCTAAATGAGTGGGGAAACAATCCGGTCCAAAATGAGAAGGAGTTGTTCAACCTTAGACACTCATCCCTTCGTATCACTGTTGAACGTGCATTTGGGTCACTGAAGAGGAGGTTCAAAATTCTTGATGATGCCACACCATTTTTCCCCTTTCAGACTCAAGTAAACATTGTTGTAGCTTGTTGTATTATTCATAATTGGGTGATAAATGATGATATTGATGAGCTTGTGATGGGCCCAAATGAGTCCATAATTCAAGACAACGATACTTCTACGGTTGGCCAACCAAACGACCACGCATGGATGGTTCAATTTAGGCAAGGACTTGCAGATCAGATGTGGGCCGATCGTCAAAATCACCATGGAAACTAAATTGTGCTTGTACTATTTAGCATTTCAAAAACATGTTTGCATTCCTTTGTGTGGATGTATTGTCAAGACTAAATTTATTTGTAGTTGTACTATTTGTATGGACTACTTGTATGATGAATTTAAATTGTACGAACATATGTATTGATGTATTACTC                     ]
[+] EMBL C25943               [                                                                                                                                                                                                                                                                                                                                                                                                                                               TGAAAGGGATAGAAAGATAAGTGAACACCTCGATGACCTCATTTGGAGAAATGATATAACTTGTATCAACATGCTTAGACTTAGAAAATCATCTTTCTTTCGATTTTGTAAACTTTTTAGAGATCGTGGCTTGCTTGAAGATACCATCAACGTGTGTGTTGAGGAACAAGTTGCTATGTTTTTACATACAATTGGACACAATCTTAGAAATAGGGTAGTTGGTGCTACTTTCCGTA GTCAGGAGAAATAGTTAGTCGATATTTTAATTTGGTACTTCATGCGGTTGGAGAGTTATGAAATGATCTTATCAAGCCCCCATCTTTGGACATCGCACCTAAAATAGCAGGCAACCACAGATGGGATCCATACATTAGGGATTGTATTGGNGCTATTGATGGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AU075345             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       nCTGGTTGGGAGGGGGCTNCACATGATGTNGTAGTTTTAAGAGATGCNTTGGAACGTG AAATGNTCTTCATGTCCCCCAAGGAAAATTCTACCTAGTTGATGTTGGATNCGGANCCAAACCGGGATTTTTGCCACCCTTTAGAAGCACCCGGTATCATCTAAATGAGTGGGGAAACAATCCGGTCCAAAATGAGAAGGAGTTGTTCAACCTTAGACACTCATCCCTTCGTATCACTGTTGAACGTGCATTTGGGTCACTGAAGAGGAGGTTCAAAATTCTTGATGATGCCACACCATTTTTCCCCTTTCAGACTCAAGTAAACATTGTTGTAGCTTGTTGTATTATTCATAATTGGGTGATAAATGATGATATTGATGAGCTTGTGATGGGCCCAAATGAGTCCATAATTCAAGACAACGATACTTCTACGGTTGGCCAACCAAACGACCACGCATGGATGGTTCAATTTAGGCAAGGACTTGCAGATCAGATGTGGGCCGATCGTCAAAATCACCATGGAAACTAAATTGTGCTTGTACTATTTAGCATTTCAAAAACATGTTTGCATTCCTTTGTGTGGATGTATTGTCAAGACTAAATTTATTTGTAGTTGTACTATTTGTATGGACTACTTGTATGATGAATTTAAATTGTACGAACATATGTATTGATGTATTACTCTTGAATGAAAAAAAAAAAAAA]


>consensus_14277#0 GAGGGGATCACACCTTTCTCTCGCTTTCTCTCTCGTTTGCGAGCGGCGGCGCGGGCGCTC GAGCTGACGGTCGGTAGAGACGGCGCCGGGCATCTGGAGGGTGTTACACCGGGAGGGGGG GAGGTGGCCGCCGGCATGGGGAGTGGCCGCCGGCGTGCTGTAGAGTTTCAATTAACAATT ATTGGCTGTTTGGGATCCTGTTTGCTCACTGTTTGGGATTTTTTTTTGTTGTTTGTTTGC AGGTTTGGAGGCTGATCTAGTGAGATTGTTTTTCAACGGACCGCTTCCTGTGTTGTCAAG ATGGATCAAAGGAGCAGGCTTTTAATTTTTGCTGCTGCTGCAAACATGTTAGTGTCGATG ATGGCCCTTATTATTGAGTCTAGAAATAGGAGAGTGCCAAGGAGAGTAGGAATAACATAT GGCCCATTAGTTGAAAGGGATAGAAAGATAAGTGAACACCTCGATGACCTCATTTGGAGA AATGATATAACTTGTATCAACATGCTTAGACTTAGAAAATCATCTTTCTTTCGATTTTGT AAACTTTTTAGAGATCGTGGCTTGCTTGAAGATACCATCAACGTGTGTGTTGAGGAACAA GTTGCTATGTTTTTACATACAATTGGACACAATCTTAGAAATAGGGTAGTTGGTGCTACT TTCCGTAGGTCAGGAGAAATAGTTAGTCGATATTTTAATTTGGTACTTCATGCGGTTGGA GAGTTATGAAATGATCTTATCAAGCCCCCATCTTTGGACATCGCACCTAAAATAGCAGGC AACCACAGATGGGATCCATACATTAAGGATTGTATTGGAGCTATTGATGGCACACATGTT AGAGCATCTGTCCCAAAGAACATGGAGTCGTCTTTTCGTGGTAGGAAGAATCATGCTACA CAAAATGTAATGGCAGCAGTAGATTTTGATCTTCGGTTCACATATGTGTTGGCTGGTTGG GAGGGGGCTGCACATGATGTTGTAGTTTTAAGAGATGCTTTGGAACGTGAAAATGGTCTT CATGTCCCCCAAGGAAAATTCTACCTAGTTGATGTTGGATACGGAGCCAAACCGGGATTT TTGCCACCCTTTAGAAGCACCCGGTATCATCTAAATGAGTGGGGAAACAATCCGGTCCAA AATGAGAAGGAGTTGTTCAACCTTAGACACTCATCCCTTCGTATCACTGTTGAACGTGCA TTTGGGTCACTGAAGAGGAGGTTCAAAATTCTTGATGATGCCACACCATTTTTCCCCTTT CAGACTCAAGTAAACATTGTTGTAGCTTGTTGTATTATTCATAATTGGGTGATAAATGAT GATATTGATGAGCTTGTGATGGGCCCAAATGAGTCCATAATTCAAGACAACGATACTTCT ACGGTTGGCCAACCAAACGACCACGCATGGATGGTTCAATTTAGGCAAGGACTTGCAGAT CAGATGTGGGCCGATCGTCAAAATCACCATGGAAACTAAATTGTGCTTGTACTATTTAGC ATTTCAAAAACATGTTTGCATTCCTTTGTGTGGATGTATTGTCAAGACTAAATTTATTTG TAGTTGTACTATTTGTATGGACTACTTGTATGATGAATTTAAATTGTACGAACATATGTA TTGATGTATTACTCTTGAATGAAAAAAAAAAAAAA



consensusID : consensus_14277#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1574
fasta sequence
                              [CTCCTCCTCACGATAACCTCTAGGGTTAGGGTTAGTGGCGGCGGCGGAAGCGCACAAGGCGGCGGCGCGAGCTGGGGGCAAGGCGGCGCCTCACGAGCAGGGCGAGGCGGCGGCGTGGCCTGAGGCGGCGCGCTACCAGGGCGACGCAGCGGCGTGGCCAAGGCGACGCGGCGGCGCGAGGAGGGCGAGGCGGCTGCGCGAGCTGGGGCTAGCCGGCGGCGCGAGCTGGGCAAAGCGGCGGCACGAGAAGGCCTCATCCTCTCCATCCCTACCCACAAACTGCAGAGCTCGGTTTCCATTGTTCAAGATGGATAAGAGGACCAAGCTTTTAGTTTGTATTGCTGCTACAAATTTATTGTTATCAATGATGGCCATGATTATTCGGTCTAGAAAAAAGAACGAGAGGTTCAAGGAGAGAAGGTATTAGATATGGCCCAATGGTTGAAAGGGATAGGATAAGAATTGAGTATCTAGAAACGAAAATTTGGAGGAATGATACAACTTGTATTGATATGCTTAGACTTAGAAGAGGAAGTTTTTTTCGTTTTTGTAAGCTGTTTAGGGATTGTGGTTTACTTGAAGATACCATCCACATGTGTATTGAGGAACAAGTTGCTATGTTTCTGCATACGGTGGGGCATAACCTTAGAAATAGGTTAGTCCGCACTAATTATGATAGGTCTGGAGAAACAGTAAGTCGTTATTTCAACAAAGTCCTTCATGCAATTGGTGAGCTACGAGATGAACTTATCAGACCCCCCTCATTGGACACTCCAACTAAAATAGCAGGAAATCCTAGATGGGATCCTTACTTTAAGGATTGTATTGGAGCTATTGATGGCACACATATTAGAGCCTCTATTCGTAAGAATGTGGAGTCTTCTTTTCGTGGTAGGAAGTCCCATGCCACACAAAATGTAATGGCGGCCGTAGATTTTGATCTTCGGTTTACTTATGTCCTGGCTGGTTGGGAGGGGACAACACATGATGCTGTAGTTTTAAGAGATGCTTTGGAACGTGAAAATGGCCTTCATGTCCCACAAGGAAAATTCTATCTAGTTGATGCTGGATATGGAGCCAAACAAGGATTCTTGCCTCCTTTTCGTGCTGTCCGGTACCACTTGAAAGAGTGGGGGAATAATCCGGTGCAAAATGAGAAGGAGTTGTTCAACCTTAGACACTAATCCCTCCGTATACGGTTGAACGTGCATTTGGGTCACTAAAGAGGAGGTTCAAAGTTCTAGATGATGCCACTCCATTCTTCCCATTTCGAACTCAAGTAGATATTGTTGTAACTTGTTGTATTATTCATAACTGGGTCATAAATGACGGAATTGATGAGCTTATAGCTCCATCTGATTGGACAAGTGAGGACATTGATGAATCGTCAACCGGCCAAGCGAATGACCATGCATTGATGGTTTAGTTTAGGCAGGGTTTAGCTGATCAGATGTGGGCTGACCGTAATAACCATCATGGAGTGTAATATGTAGCCATGCAACTTGTATTTCTACCTTATTTGCTACATTTCATTTGTATTATGAACTTCTTTTATTTATTTAATTCGTGTGGAC]

[+] EMBL AK070418             [CTCCTCCTCACGATAACCTCTAGGGTTAGGGTTAGTGGCGGCGGCGGAAGCGCACAAGGCGGCGGCGCGAGCTGGGGGCAAGGCGGCGCCTCACGAGCAGGGCGAGGCGGCGGCGTGGCCTGAGGCGGCGCGCTACCAGGGCGACGCAGCGGCGTGGCCAAGGCGACGCGGCGGCGCGAGGAGGGCGAGGCGGCTGCGCGAGCTGGGGCTAGCCGGCGGCGCGAGCTGGGCAAAGCGGCGGCACGAGAAGGCCTCATCCTCTCCATCCCTACCCACAAACTGCAGAGCTCGGTTTCCATTGTTCAAGATGGATAAGAGGACCAAGCTTTTAGTTTGTATTGCTGCTACAAATTTATTGTTATCAATGATGGCCATGATTATTCGGTCTAGAAAAAAGAACGAGAGGTTCAAGGAGAGAAGGTATTAGATATGGCCCAATGGTTGAAAGGGATAGGATAAGAATTGAGTATCTAGAAACGAAAATTTGGAGGAATGATACAACTTGTATTGATATGCTTAGACTTAGAAGAGGAAGTTTTTTTCGTTTTTGTAAGCTGTTTAGGGATTGTGGTTTACTTGAAGATACCATCCACATGTGTATTGAGGAACAAGTTGCTATGTTTCTGCATACGGTGGGGCATAACCTTAGAAATAGGTTAGTCCGCACTAATTATGATAGGTCTGGAGAAACAGTAAGTCGTTATTTCAACAAAGTCCTTCATGCAATTGGTGAGCTACGAGATGAACTTATCAGACCCCCCTCATTGGACACTCCAACTAAAATAGCAGGAAATCCTAGATGGGATCCTTACTTTAAGGATTGTATTGGAGCTATTGATGGCACACATATTAGAGCCTCTATTCGTAAGAATGTGGAGTCTTCTTTTCGTGGTAGGAAGTCCCATGCCACACAAAATGTAATGGCGGCCGTAGATTTTGATCTTCGGTTTACTTATGTCCTGGCTGGTTGGGAGGGGACAACACATGATGCTGTAGTTTTAAGAGATGCTTTGGAACGTGAAAATGGCCTTCATGTCCCACAAGGAAAATTCTATCTAGTTGATGCTGGATATGGAGCCAAACAAGGATTCTTGCCTCCTTTTCGTGCTGTCCGGTACCACTTGAAAGAGTGGGGGAATAATCCGGTGCAAAATGAGAAGGAGTTGTTCAACCTTAGACACTAATCCCTCCGTATACGGTTGAACGTGCATTTGGGTCACTAAAGAGGAGGTTCAAAGTTCTAGATGATGCCACTCCATTCTTCCCATTTCGAACTCAAGTAGATATTGTTGTAACTTGTTGTATTATTCATAACTGGGTCATAAATGACGGAATTGATGAGCTTATAGCTCCATCTGATTGGACAAGTGAGGACATTGATGAATCGTCAACCGGCCAAGCGAATGACCATGCATTGATGGTTTAGTTTAGGCAGGGTTTAGCTGATCAGATGTGGGCTGACCGTAATAACCATCATGGAGTGTAATATGTAGCCATGCAACTTGTATTTCTACCTTATTTGCTACATTTCATTTGTATTATGAACTTCTTTTATTTATTTAATTCGTGTGGAC]


>consensus_14277#1 CTCCTCCTCACGATAACCTCTAGGGTTAGGGTTAGTGGCGGCGGCGGAAGCGCACAAGGC GGCGGCGCGAGCTGGGGGCAAGGCGGCGCCTCACGAGCAGGGCGAGGCGGCGGCGTGGCC TGAGGCGGCGCGCTACCAGGGCGACGCAGCGGCGTGGCCAAGGCGACGCGGCGGCGCGAG GAGGGCGAGGCGGCTGCGCGAGCTGGGGCTAGCCGGCGGCGCGAGCTGGGCAAAGCGGCG GCACGAGAAGGCCTCATCCTCTCCATCCCTACCCACAAACTGCAGAGCTCGGTTTCCATT GTTCAAGATGGATAAGAGGACCAAGCTTTTAGTTTGTATTGCTGCTACAAATTTATTGTT ATCAATGATGGCCATGATTATTCGGTCTAGAAAAAAGAACGAGAGGTTCAAGGAGAGAAG GTATTAGATATGGCCCAATGGTTGAAAGGGATAGGATAAGAATTGAGTATCTAGAAACGA AAATTTGGAGGAATGATACAACTTGTATTGATATGCTTAGACTTAGAAGAGGAAGTTTTT TTCGTTTTTGTAAGCTGTTTAGGGATTGTGGTTTACTTGAAGATACCATCCACATGTGTA TTGAGGAACAAGTTGCTATGTTTCTGCATACGGTGGGGCATAACCTTAGAAATAGGTTAG TCCGCACTAATTATGATAGGTCTGGAGAAACAGTAAGTCGTTATTTCAACAAAGTCCTTC ATGCAATTGGTGAGCTACGAGATGAACTTATCAGACCCCCCTCATTGGACACTCCAACTA AAATAGCAGGAAATCCTAGATGGGATCCTTACTTTAAGGATTGTATTGGAGCTATTGATG GCACACATATTAGAGCCTCTATTCGTAAGAATGTGGAGTCTTCTTTTCGTGGTAGGAAGT CCCATGCCACACAAAATGTAATGGCGGCCGTAGATTTTGATCTTCGGTTTACTTATGTCC TGGCTGGTTGGGAGGGGACAACACATGATGCTGTAGTTTTAAGAGATGCTTTGGAACGTG AAAATGGCCTTCATGTCCCACAAGGAAAATTCTATCTAGTTGATGCTGGATATGGAGCCA AACAAGGATTCTTGCCTCCTTTTCGTGCTGTCCGGTACCACTTGAAAGAGTGGGGGAATA ATCCGGTGCAAAATGAGAAGGAGTTGTTCAACCTTAGACACTAATCCCTCCGTATACGGT TGAACGTGCATTTGGGTCACTAAAGAGGAGGTTCAAAGTTCTAGATGATGCCACTCCATT CTTCCCATTTCGAACTCAAGTAGATATTGTTGTAACTTGTTGTATTATTCATAACTGGGT CATAAATGACGGAATTGATGAGCTTATAGCTCCATCTGATTGGACAAGTGAGGACATTGA TGAATCGTCAACCGGCCAAGCGAATGACCATGCATTGATGGTTTAGTTTAGGCAGGGTTT AGCTGATCAGATGTGGGCTGACCGTAATAACCATCATGGAGTGTAATATGTAGCCATGCA ACTTGTATTTCTACCTTATTTGCTACATTTCATTTGTATTATGAACTTCTTTTATTTATT TAATTCGTGTGGAC



consensusID : consensus_14277#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1203
fasta sequence
                              [TTTTTTTTTGAAATCCACAAATTTTCCAATTCAAAGTCTCACATAATAGTAGATAATTGCATGAAGTCTTACACATAGCCCAAATTAACGGTGCACACACAATACAAAATGAGAGGGTACAAATAGTTCATAATAGTGAAATAACCAATCTTTCCATGAAGATGGTATCCTACATAGCACCGGGAAACTTCTCGCTGATGTACATAGCAACCCAATCAAGTTTGTTCGCAAATGGAAGACCGTTGAAAGCTCTAGCAATATGTGGATTAGCAACCAAATAGTGATAGTAGAAAGAGATGTGATGTTGCTCAAAACCTGGAAGGCTATTCAAGTTGTCCCATAGATCATCAGGTAGTTCATTCCCAACTGTGCTAGACCTTATTATGGCATTTGCTAGTTTGTCACTAGCTCTGTCAAATGCACCAACCAAACCATCATCGTCATGTGCATATGTCTTTTGTCTCTTGGGCTTGCTAGCCGATGATCTCTCATCATGATCTATTGTGGGAGCATCTT-CATTCACTTCATTCTCTGTACCCTCGACATCTTCAGTGCCTAGAACTGAGC-TTGAGTCCTTT-GCAAAATTTCCTATAGCCAT-GGTAC-TACCAAATATGGTAAGCATCTCACCATAGTTGGTAATAGGCCTGTTGAAAAACTCAGCATCGCTCTTGTTGTTATGCTGCATATAGTCATTGTAGTGCTCCTCGTCAAGGCTAATAATGAAGTTCTCTTCGTCCCAAATAGCTCCACTCACCTTCCTAAGACGACTAATCTTTTGAAACTTCTTATGCCATGTCTTCAAATGATTTCTAATCTGATCCCCGGTGAGTGTTGTCGAAAACTTTTCATTCACAACTCTAGCACATGCATTGAGATGCACCTGCTTAAAACCAGCCGATGTCCTTGTGCCACTAGCCACCAGATTGGCCAAATTGGAGAGCATCAAAGATGA-CATGGATGATGTCCATGAGGCTACAACTCCCTTTCCGTTGTTGGTGTCCATATCCTAGCTTGACAACACAGGAAGCGGTCCGTTGAAAAACAATCTCACTAGATCAGCCTCCTAACCTCCAGATGCCCGGCGCCGTCTCTACCGACCGTCAGCTCGAGCGCCCGCGCCGCCGCTCGCAAACGAGAGAGAAAGCGAGAGAAAGGTGTGATCCCCTCACCCCCCTCTCCCTCTGTGCGTGCGATGCGCCAGCA]

[-] EMBL AU166411             [TTTTTTTTTGAAATCCACAAATTTTCCAATTCAAAGTCTCACATAATAGTAGATAATTGCATGAAGTCTTACACATAGCCCAAATTAACGGTGCACACACAATACAAAATGAGAGGGTNCAAATAGTTCATAATAGTGAAATAACCAATCTTTCCATGAAGATGGTATCCTACATAGCACCGGGAAACTTCTCGCTGATGTACATAGCAACCCAATCAAGTTTGTTCGCAAATGGAAGACCGTTGAAAGCTCTAGCAATATGTGGATTAGCAACCAAATAGTGATAGTAGAAAGAGATGTGATGTTGCTCAAAACCTGGAAGGCTATTCAAGTTGTCCCATAGATCATCAGGTAGTTCATTCCCAACTGTGCTAGACCTTATTATGGCATTTGCTAGTTTGTCACTAGCTCTGTCAAATGCACCAACCAAACCATCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CB631124             [       TTGAAGTCCACAAATTTTCCAATTCAAAGTCTCACATAATAGTAAATAATTGCATGAAGTCTTATACATAGCCCAAATTAACGGGGCACACACAATACAAAATGAGAGGGTACAAATAGTTCATAATAGCGAAATAACCAATCTTTCCATGAAGATGGTATCCTACATAGCACCGGGAAACTTCTCGCTGATGTACATAGCAACCCAATCAAGTTTGTTCACAAATGGAAAACCGTTGAAAGCTCTAGCAATATGTGGATTAAAAACCAAATAGTGATAGTAAAAAGAGATGTGATGTTGCTCAAAACCTAAAAGGCTATTCAAGTTGTCCCATAAATCATCAGGTAGTTCATTCCCAACTGTGCTAAACCTTATTATGGCATTTGCTAGTTTGTCACTAGCTCTGTCAAATGCACCAACCAAACCATCATCGTCATGTGCATATGTCTTTTGTCTCTTGGGCTTGCTAGCCGATGATCTCTCATCATGATCTACTGGGGGAGCATCTT CATTCACTTCATTCTCTGTACCCTCGACATCTTCAGTGCCTAAAGCTGAGC TTGAGTCCTTT GCAAAATTTCCTGTAGCCAT GGTAC TACCAAATATGGTAAGCATCTCACCATAGTTGGTAATAGGCCTGTTGAAAAACTCAGCATCGCTCTTGTTGTTATGCTGCATATAGTCATTGTAGTGCTCCTCGTCAAGGCTAATAATGAAGTTCTCTTCGTCCCAAATAGCTCCACTCACCTTCCTAAGACGACTAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL AK063928             [        TGAAATCCACAAATTTTCCAATTCAAAGTCTCACATAATAGTAGATAATTGCATGAAGTCTTACACATAGCCCAAATTAACGGTGCACACACAATACAAAATGAGAGGGTACAAATAGTTCATAATAGTGAAATAACCAATCTTTCCATGAAGATGGTATCCTACATAGCACCGGGAAACTTCTCGCTGATGTACATAGCAACCCAATCAAGTTTGTTCGCAAATGGAAGACCGTTGAAAGCTCTAGCAATATGTGGATTAGCAACCAAATAGTGATAGTAGAAAGAGATGTGATGTTGCTCAAAACCTGGAAGGCTATTCAAGTTGTCCCATAGATCATCAGGTAGTTCATTCCCAACTGTGCTAGACCTTATTATGGCATTTGCTAGTTTGTCACTAGCTCTGTCAAATGCACCAACCAAACCATCATCGTCATGTGCATATGTCTTTTGTCTCTTGGGCTTGCTAGCCGATGATCTCTCATCATGATCTATTGTGGGAGCATCTT CATTCACTTCATTCTCTGTACCCTCGACATCTTCAGTGCCTAGAACTGAGC TTGAGTCCTTT GCAAAATTTCCTATAGCCAT GGTAC TACCAAATATGGTAAGCATCTCACCATAGTTGGTAATAGGCCTGTTGAAAAACTCAGCATCGCTCTTGTTGTTATGCTGCATATAGTCATTGTAGTGCTCCTCGTCAAGGCTAATAATGAAGTTCTCTTCGTCCCAAATAGCTCCACTCACCTTCCTAAGACGACTAATCTTTTGAAACTTCTTATGCCATGTCTTCAAATGATTTCTAATCTGATCCCCGGTGAGTGTTGTCGAAAACTTTTCATTCACAACTCTAGCACATGCATTGAGATGCACCTGCTTAAAACCAGCCGATGTCCTTGTGCCACTAGCCACCAGATTGGCCAAATTGGAGAGCATCAAAGATGA CATGGATGATGTCCATGAGGCTACAACTCCCTTTCCGTTGTTGGTGTCCATATCCTAGCTTGACAACACAGGAAGCGGTCCGTTGAAAAACAATCTCACTAGATCAGCCTCCTAACCTCCAGATGCCCGGCGCCGTCTCTACCGACCGTCAGCTCGAGCGCCCGCGCCGCCGCTCGCAAACGAGAGAGAAAGCGAGAGAAAGGTGTGATCCCCTCACCCCCCTCTCCCTCTGTGCGTGCGATGCGCCAGCA]
[-] EMBL AK099347             [                   AATTTTCCAATTCAAAGTCTCACATAATAGTAGATAATTGCATGAAGTCTTACACATAGCCCAAATTAACGGTGCACACACAATACAAAATGAGAGGGTACAAATAGTTCATAATAGTGAAATAACCAATCTTTCCATGAAGATGGTATCCTACATAGCACCGGGAAACTTCTCGCTGATGTACATAGCAACCCAATCAAGTTTGTTCGCAAATGGAAGACCGTTGAAAGCTCTAGCAATATGTGGATTAGCAACCAAATAGTGATAGTAGAAAGAGATGTGATGTTGCTCAAAACCTGGAAGGCTATTCAAGTTGTCCCATAGATCATCAGGTAGTTCATTCCCAACTGTGCTAGACCTTATTATGGCATTTGCTAGTTTGTCACTAGCTCTGTCAAATGCACCAACCAAACCATCATCGTCATGTGCATATGTCTTTTGTCTCTTGGGCTTGCTAGCCGATGATCTCTCATCATGATCTATTGTGGGAGCATCTT CATTCACTTCATTCTCTGTACCCTCGACATCTTCAGTGCCTAGAACTGAGC TTGAGTCCTTT GCAAAATTTCCTATAGCCAT GGTAC TACCAAATATGGTAAGCATCTCACCATAGTTGGTAATAGGCCTGTTGAAAAACTCAGCATCGCTCTTGTTGTTATGCTGCATATAGTCATTGTAGTGCTCCTCGTCAAGGCTAATAATGAAGTTCTCTTCGTCCCAAATAGCTCCACTCACCTTCCTAAGACGACTAATCTTTTGAAACTTCTTATGCCATGTCTTCAAATGATTTCTAATCTGATCCCCGGTGAGTGTTGTCGAAAACTTTTCATTCACAACTCTAGCACATGCATTGAGATGCACCTGCTTAAAACCAGCCGATGTCCTTGTGCCACTAGCCACCAGATTGGCCAAATTGGAGAGCATCAAAGATGA CATGGATGATGTCCATGAGGCTACAACTCCCTTTCCGTTGTTGGTGTCCATATCCTAGCTTGACAACACAGGAAGCGGTCCGTTGAAAAACAATCTCACTAGATCAGCCTCCTAACCTCCAGATGCCCGGCGCCGTCTCTACCGACCGTCAGCTCGAGCGCCCGCGCCGCCGCTCGCAAACGAGAGAGAAAGCGAGAGAAAGGTGTGATCCCCTCACCCCCCTCTCCCTCT                    ]
[-] EMBL AU108226             [                   ttTTTTCCAATTCAAAGTCTCACATAATAGTAGATAATTGCATGAAGTCTTACACATAGCCCAAATTAACGGTGCACACACAATACAAAATGAGAGGGTACAAATAGTTCATAATAGTGAAATAACCAATCTTTCCATGAAGATGGTATCCTACATAGCACCGGGAAACTTCTCGCTGATGTACATAGCAACCCAATCAAGTTTGTTCGCAAATGGAAGACCGTTGAAAGCTCTAGCAATATGTGGATTAGCAACCAAATAGTGATAGTAGAAAGAGATGTGATGTTGCTCAAAACCTGGAAGGCTATTCAAGTTGTCCCATAGATCATCAGGTAGTTCATTCCCAACTGTGCTAGACCTTATTATGGCATTTGCTAGTTTGTCACTAGCTCTGTCAAATGCACCAACCAAACCATCATCGTCATGTGCATATGTCTTTTGTCTCTTGGGCTTGCTAGCCGATGATCTCTCATCATGATCTATTGTGGGAGCATCTT CATTCACTTCATTCTCTGTACCCTCGACATCTTCAGTGCCTAGAACTGAGC TTGAGTCCTTT GCAAAATTTCCTATAGCCAT GGTAC TACCAAATATGGTAAGCATCTCACCATAGTTGGTAATAGGCCTGTTGAAAAACTCAGCATCGCTCTTGTTGTTATGCTGCATATAGTCATTGTAGTGCTCCTCGTCAAGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL AU056121             [                                         tttttTAGTAGATAATTGCATGAAGTCTTACACATAGCCCAAATTAACGGTGCACACACAATACAAAATGAGAGGGTACAAATAGTTCATAATAGTGAAATAACCAATCTTTCCATGAAGATGGTATCCTACATAGCACCGGGAAACTTCTCGCTGATGTACATAGCAACCCAATCAAGTTTGTTCGCAAATGGAAGACCGTTGAAAGCTCTAGCAATATGTGGATTAGCAACCAAATAGTGATAGTAGAAAGAGATGTGATGTTGCTCAAAACCTGGAAGGCTATTCAAGTTGTCCCATAGATCATCAGGTAGTTCATTCCCAACTGTGCTAGACCTTATTATGGCATTTGCTAGTTTGTCACTAGCTCTGTCAAATGCACCAACCAAACCATCATCGTCATGTGCATATGTCTTTTGTCTCTTGGGCTTGCTAGCCGATGATCTCTCATCATGATCTATTGTNGGAGCATCTTCCATTCACTTCCATCTCTGTACCCTCGACATCTTCAGTGCCTAGNACTGAGCTTTGAGTCCTTTGGCAAAATTTCCTATAGCCATGGGNACTTACCAAATATGGg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL C26301               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GCTCNACTCACCTTCCTAAGACGACTAATCTTTTGAAACTTCTTATGCCATGTCTTCAAATGATTTCTAATCTGATCCCCGGTGAGTGTTGTCGAAAACTTTTCATTCACAACTCTAGCACATGCATTGAGATGCACCTGCTTAAAACCAGCCGATGTCCTTGTGCCACTAGCCACCAGATTGGCCAAATTGGAGAGCATCAAAGATGA CATGGATGATGTCCATGAGGCTACAACTCCCTTTCCGTTGTTGGTGTCCATATCCTAGCTTGACAACACAGGAAGCGGTCCGTTGAAAAACAATCTCACTAGATCAGCCTCCTAACCTCCAGATGCCCGGCGCCGTCTCTACCGACCGTCAG                                                                                                   ]
[-] EMBL C26200               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GCATTAAAGATTACCATGNATGATGTCCATGAGGCTACAACTCCCTTTCCGTTGTTGGTGTCCATATCCTAGCTTTACAANACAGGAAGCGGTCCGTTTAAAAACAATCTCACTAGATCAGCCTCCTAACCTCCAGATGCCCGGCGCCGTCTCTACCGACCGTCAGNTCGAGCGCCCGCGCCGCCGCTNGCAAACGAGAGAGAAAGCGAGAGAAAGGTGTGATCCCCTCACCCCCCTCTCCCTCTGTGCGTGCGATGCGCCA   ]


>consensus_14277#2 TTTTTTTTTGAAATCCACAAATTTTCCAATTCAAAGTCTCACATAATAGTAGATAATTGC ATGAAGTCTTACACATAGCCCAAATTAACGGTGCACACACAATACAAAATGAGAGGGTAC AAATAGTTCATAATAGTGAAATAACCAATCTTTCCATGAAGATGGTATCCTACATAGCAC CGGGAAACTTCTCGCTGATGTACATAGCAACCCAATCAAGTTTGTTCGCAAATGGAAGAC CGTTGAAAGCTCTAGCAATATGTGGATTAGCAACCAAATAGTGATAGTAGAAAGAGATGT GATGTTGCTCAAAACCTGGAAGGCTATTCAAGTTGTCCCATAGATCATCAGGTAGTTCAT TCCCAACTGTGCTAGACCTTATTATGGCATTTGCTAGTTTGTCACTAGCTCTGTCAAATG CACCAACCAAACCATCATCGTCATGTGCATATGTCTTTTGTCTCTTGGGCTTGCTAGCCG ATGATCTCTCATCATGATCTATTGTGGGAGCATCTTCATTCACTTCATTCTCTGTACCCT CGACATCTTCAGTGCCTAGAACTGAGCTTGAGTCCTTTGCAAAATTTCCTATAGCCATGG TACTACCAAATATGGTAAGCATCTCACCATAGTTGGTAATAGGCCTGTTGAAAAACTCAG CATCGCTCTTGTTGTTATGCTGCATATAGTCATTGTAGTGCTCCTCGTCAAGGCTAATAA TGAAGTTCTCTTCGTCCCAAATAGCTCCACTCACCTTCCTAAGACGACTAATCTTTTGAA ACTTCTTATGCCATGTCTTCAAATGATTTCTAATCTGATCCCCGGTGAGTGTTGTCGAAA ACTTTTCATTCACAACTCTAGCACATGCATTGAGATGCACCTGCTTAAAACCAGCCGATG TCCTTGTGCCACTAGCCACCAGATTGGCCAAATTGGAGAGCATCAAAGATGACATGGATG ATGTCCATGAGGCTACAACTCCCTTTCCGTTGTTGGTGTCCATATCCTAGCTTGACAACA CAGGAAGCGGTCCGTTGAAAAACAATCTCACTAGATCAGCCTCCTAACCTCCAGATGCCC GGCGCCGTCTCTACCGACCGTCAGCTCGAGCGCCCGCGCCGCCGCTCGCAAACGAGAGAG AAAGCGAGAGAAAGGTGTGATCCCCTCACCCCCCTCTCCCTCTGTGCGTGCGATGCGCCA GCA



consensusID : consensus_14277#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 801
fasta sequence
                              [ACCTTTCTCTCGCTTTCTCTCTCGTTTGCAAGCGGCGGCGCGGGCGCTCGAGCTGACGGTCGGCAAAGGCGGCGACGGAGGTGGCGCCGGGCATCTGGAGGTTAGGAGGCTGATCTAGTGAGATTGTTTTTCAATGGACCGCTTCCTGTGTTGTCAAGATGGATCAAAGGAGCAGGCTTTTAATTTTTGCTGCTGCTGTAAACATGTTATTGTCGATGATGGCCCTTGTTATTGAGTCTAGAAATAGGAGAGTGCCAAGGAGAGTAGGAATAACATATGGCCCATTAGTTGAGAGGGATAGAAAGAGAAGTGAACACCTCGATGACCTCATTTGGAGAAGTGATATAACTTGTATCAACATGCTTAGACTTAGAAAATCATCTTTCTTTCGATTTTGTAAACTTTTTAGAGATCGTGGCTTGCTTGAAGATACCATCAACGTGTGTGTTGAGGAACAAGTTGCTATGTTTTTACATACAATTGGACACAATCTTAGAAATAGGGTAGTTGGTGCTACTTTCCGTAGGTCAGGAGAAACAGTTAGTCGATATTTTAATTTGGTACTTCATGCGGTTGGAGAGTTACGAAATGATCTTATCAAGCCCCCATCTTTGGACATCGCACCTAAAATAGCAGGCAACCACAGATGGGATCCATACTTTAAGGATTGTATTGGAGCTATTGATGGCACACATGTTAGAGCATTTGTCCCAAAGAACATGGAGTCGTCTTTTCGTGGTAGGAAGAATCATGCTACACAAAATGTAATGGCAGCAGTAGATTTTGATCTTCGGTTCACAT]

[+] EMBL CB631123             [ACCTTTCTCTCGCTTTCTCTCTCGTTTGCAAGCGGCGGCGCGGGCGCTCGAGCTGACGGTCGGCAAAGGCGGCGACGGAGGTGGCGCCGGGCATCTGGAGGTTAGGAGGCTGATCTAGTGAGATTGTTTTTCAATGGACCGCTTCCTGTGTTGTCAAGATGGATCAAAGGAGCAGGCTTTTAATTTTTGCTGCTGCTGTAAACATGTTATTGTCGATGATGGCCCTTGTTATTGAGTCTAGAAATAGGAGAGTGCCAAGGAGAGTAGGAATAACATATGGCCCATTAGTTGAGAGGGATAGAAAGAGAAGTGAACACCTCGATGACCTCATTTGGAGAAGTGATATAACTTGTATCAACATGCTTAGACTTAGAAAATCATCTTTCTTTCGATTTTGTAAACTTTTTAGAGATCGTGGCTTGCTTGAAGATACCATCAACGTGTGTGTTGAGGAACAAGTTGCTATGTTTTTACATACAATTGGACACAATCTTAGAAATAGGGTAGTTGGTGCTACTTTCCGTAGGTCAGGAGAAACAGTTAGTCGATATTTTAATTTGGTACTTCATGCGGTTGGAGAGTTACGAAATGATCTTATCAAGCCCCCATCTTTGGACATCGCACCTAAAATAGCAGGCAACCACAGATGGGATCCATACTTTAAGGATTGTATTGGAGCTATTGATGGCACACATGTTAGAGCATTTGTCCCAAAGAACATGGAGTCGTCTTTTCGTGGTAGGAAGAATCATGCTACACAAAATGTAATGGCAGCAGTAGATTTTGATCTTCGGTTCACAT]


>consensus_14277#3 ACCTTTCTCTCGCTTTCTCTCTCGTTTGCAAGCGGCGGCGCGGGCGCTCGAGCTGACGGT CGGCAAAGGCGGCGACGGAGGTGGCGCCGGGCATCTGGAGGTTAGGAGGCTGATCTAGTG AGATTGTTTTTCAATGGACCGCTTCCTGTGTTGTCAAGATGGATCAAAGGAGCAGGCTTT TAATTTTTGCTGCTGCTGTAAACATGTTATTGTCGATGATGGCCCTTGTTATTGAGTCTA GAAATAGGAGAGTGCCAAGGAGAGTAGGAATAACATATGGCCCATTAGTTGAGAGGGATA GAAAGAGAAGTGAACACCTCGATGACCTCATTTGGAGAAGTGATATAACTTGTATCAACA TGCTTAGACTTAGAAAATCATCTTTCTTTCGATTTTGTAAACTTTTTAGAGATCGTGGCT TGCTTGAAGATACCATCAACGTGTGTGTTGAGGAACAAGTTGCTATGTTTTTACATACAA TTGGACACAATCTTAGAAATAGGGTAGTTGGTGCTACTTTCCGTAGGTCAGGAGAAACAG TTAGTCGATATTTTAATTTGGTACTTCATGCGGTTGGAGAGTTACGAAATGATCTTATCA AGCCCCCATCTTTGGACATCGCACCTAAAATAGCAGGCAACCACAGATGGGATCCATACT TTAAGGATTGTATTGGAGCTATTGATGGCACACATGTTAGAGCATTTGTCCCAAAGAACA TGGAGTCGTCTTTTCGTGGTAGGAAGAATCATGCTACACAAAATGTAATGGCAGCAGTAG ATTTTGATCTTCGGTTCACAT



consensusID : consensus_14277#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 326
fasta sequence
                              [AAGCGGCGCGGGCGCTCGAGCTGACGGTCGGTAGAGACGGCGCCGGGCATCTGGAGGTTAGGAGGCTGATCTAGTGAGATTGNTTTTCAACGGACCGNTTNCTGTGTTGNCAAGCTAGGATATGGACCCCAACCACGGAAAGGGAGTTGNAGCCCTATGGACCTTCATCCCTGNCATCTTTGATGCTTTTCAATTTGGCCNATCTGGNGGCTTAGTGGCCCCAAGGGNCATTCGGGTGGGTTTAAAGCAGGGTGCATTCTTAATGNCATGGTGCTTAGAAGTTGGGNATGGAAAGGTTTTCGAACACNACTTCACCGGGGAATCAG]

[+] EMBL AU173877             [AAGCGGCGCGGGCGCTCGAGCTGACGGTCGGTAGAGACGGCGCCGGGCATCTGGAGGTTAGGAGGCTGATCTAGTGAGATTGNTTTTCAACGGACCGNTTNCTGTGTTGNCAAGCTAGGATATGGACCCCAACCACGGAAAGGGAGTTGNAGCCCTATGGACCTTCATCCCTGNCATCTTTGATGCTTTTCAATTTGGCCNATCTGGNGGCTTAGTGGCCCCAAGGGNCATTCGGGTGGGTTTAAAGCAGGGTGCATTCTTAATGNCATGGTGCTTAGAAGTTGGGNATGGAAAGGTTTTCGAACACNACTTCACCGGGGAATCAG]


>consensus_14277#4 AAGCGGCGCGGGCGCTCGAGCTGACGGTCGGTAGAGACGGCGCCGGGCATCTGGAGGTTA GGAGGCTGATCTAGTGAGATTGNTTTTCAACGGACCGNTTNCTGTGTTGNCAAGCTAGGA TATGGACCCCAACCACGGAAAGGGAGTTGNAGCCCTATGGACCTTCATCCCTGNCATCTT TGATGCTTTTCAATTTGGCCNATCTGGNGGCTTAGTGGCCCCAAGGGNCATTCGGGTGGG TTTAAAGCAGGGTGCATTCTTAATGNCATGGTGCTTAGAAGTTGGGNATGGAAAGGTTTT CGAACACNACTTCACCGGGGAATCAG



consensusID : consensus_14277#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 318
fasta sequence
                              [TTGTGGATGGGGCCCCAATGAGTGCCATAATTGCAAGACNCAGCGAGTACTTCTTCGGTTGGCCAACCGAAATGTACCATGCAGGGATGGTTCAATTTAGGTAAGGACTTGCAGATCAGTATGNTGGNCCCGATCGTCAAAATCACCCAGTGGAAACTAAATTGTGCNTGTACTAGTTTAGCATTTCAAAAACATGTTTGCATTCCTTTGTGTGGATGTATTGTCAAGACTAAATTTATTTGTAGTTGTACTATTTGTATGGACTACTTGTATGATGAATTTAACCTGTCACGAACATATGTATTGATGTATTAAAAA]

[+] EMBL BQ906069             [TTGTGGATGGGGCCCCAATGAGTGCCATAATTGCAAGACNCAGCGAGTACTTCTTCGGTTGGCCAACCGAAATGTACCATGCAGGGATGGTTCAATTTAGGTAAGGACTTGCAGATCAGTATGNTGGNCCCGATCGTCAAAATCACCCAGTGGAAACTAAATTGTGCNTGTACTAGTTTAGCATTTCAAAAACATGTTTGCATTCCTTTGTGTGGATGTATTGTCAAGACTAAATTTATTTGTAGTTGTACTATTTGTATGGACTACTTGTATGATGAATTTAACCTGTCACGAACATATGTATTGATGTATTAAAAA]


>consensus_14277#5 TTGTGGATGGGGCCCCAATGAGTGCCATAATTGCAAGACNCAGCGAGTACTTCTTCGGTT GGCCAACCGAAATGTACCATGCAGGGATGGTTCAATTTAGGTAAGGACTTGCAGATCAGT ATGNTGGNCCCGATCGTCAAAATCACCCAGTGGAAACTAAATTGTGCNTGTACTAGTTTA GCATTTCAAAAACATGTTTGCATTCCTTTGTGTGGATGTATTGTCAAGACTAAATTTATT TGTAGTTGTACTATTTGTATGGACTACTTGTATGATGAATTTAACCTGTCACGAACATAT GTATTGATGTATTAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14277#0      --------GAGGGGATCACACCTTTCTCTCGCTTTCTCTCTCGTTTGCGAGCGGCGGCGC 52
consensus_14277#5      ------------------------------------------------------------
consensus_14277#1      CTCCTCCTCACGATAACCTCTAGGGTTAGGGTTAGTGGCGGCGGCGGAAGCGCACAAGGC 60
consensus_14277#3      ------------------------------------------------------------
consensus_14277#4      ------------------------------------------------------------
consensus_14277#2      ------------------------------------------------------------
                                                                                   

consensus_14277#0      GGGCGCTCGAGCTGACGGTCGGTAGAGACGGCGCCGGGCATCTGGAGGGTGTTACACCGG 112
consensus_14277#5      ------------------------------------------------------------
consensus_14277#1      GGCGGCGCGAGCTGGGGGCAAGGCGGCGCCTCACGAGCAGGGCGAGGCGGCGGCGTGGCC 120
consensus_14277#3      ------------------------------------------------------------
consensus_14277#4      ------------------------------------------------------------
consensus_14277#2      ------------------------------------------------------------
                                                                                   

consensus_14277#0      GAGGGGGGGAGGTGGCCGCCGGCATGGGGAGTGGCCGCCGGCGTGCTGTAGAGTTTCAAT 172
consensus_14277#5      ------------------------------------------------------------
consensus_14277#1      TGAGGCGGCGCGCTACCAGGGCGACGCAGCGGCGTGGCCAAGGCGACGCGGCGGCGCGAG 180
consensus_14277#3      ------------------------------ACCTTTCTCTCGCTTTCTCTCTCGTTTGCA 30
consensus_14277#4      ------------------------------------------------------------
consensus_14277#2      -----------------TTTTTTTTTGAAATCCACAAATTTTCCAATTCAAAGTCTCACA 43
                                                                                   

consensus_14277#0      TAACAATTATTGGCTGTTTGGG--ATCCTGTTTGCTCACTGTTTGGGATTTTTTTTTGTT 230
consensus_14277#5      ------------------------------------------------------------
consensus_14277#1      GAGGGCGAGGCGGCTGCGCGAG--CTGGGGCTAGCCGGCGGCG-CGAGCTGGGCAAAGCG 237
consensus_14277#3      AGCGGCGGCGCGGGCGCTCGAG--CTGACGGTCGGCAAAGGCGGCGACGGAGGTGGCGCC 88
consensus_14277#4      --AAGCGGCGCGGGCGCTCGAG--CTGACGGTCGGTAGAGACG------------GCGCC 44
consensus_14277#2      TAATAGTAGATAATTGCATGAAGTCTTACACATAGCCCAAATTAACGGTGCACACACAAT 103
                                                                                   

consensus_14277#0      G-TTTGTTTGCAGGT-TTGGAGGCTGATC-TAGTGAGATTGTTTTTCAACGGACCGCTTC 287
consensus_14277#5      ------------------------------------------------------------
consensus_14277#1      GCGGCACGAGAAGGC-CTCAT--CCTCTC-CATCCCTACCCACAAACTGCAGAGCTCGGT 293
consensus_14277#3      G-GGCATCTGGAGGT-TAGGAGGCTGATC-TAGTGAGATTGTTTTTCAATGGACCGCTTC 145
consensus_14277#4      G-GGCATCTGGAGGT-TAGGAGGCTGATC-TAGTGAGATTGNTTTTCAACGGACCGNTTN 101
consensus_14277#2      ACAAAATGAGAGGGTACAAATAGTTCATAATAGTGAAATAAC----CAATCTTTCCATGA 159
                                                                                   

consensus_14277#0      CTGTGTTGT-CAAGATGGATCAAAGGAGCAGGCTTTTAATTTTTGCTGCTGCTGCAAACA 346
consensus_14277#5      ------------------------------------------------------------
consensus_14277#1      TTCCATTGTTCAAGATGGATAAGAGGACCAAGCTTTTAGTTTGTATTGCTGCTACAAATT 353
consensus_14277#3      CTGTGTTGT-CAAGATGGATCAAAGGAGCAGGCTTTTAATTTTTGCTGCTGCTGTAAACA 204
consensus_14277#4      CTGTGTTGNCAAGCTAGGATATGGACCCCAACCACGGAAAGGGAGTTGNAGCCCTATGGA 161
consensus_14277#2      AGATGGTATCCTACATAGCACCGGGAAACTTCTCGCTGATGTACATAGCAACC-CAATCA 218
                                                                                   

consensus_14277#0      TGTTAGTGTCGATGATGGCCCTTATTATTGAGTCTAGAAATAGG--A----GAGTGCCAA 400
consensus_14277#5      ------------------------------------------------------------
consensus_14277#1      TATTGTTATCAATGATGGCCATGATTATTCGGTCTAGAAAAAAG--AACGAGAGGTTCAA 411
consensus_14277#3      TGTTATTGTCGATGATGGCCCTTGTTATTGAGTCTAGAAATAGG--A----GAGTGCCAA 258
consensus_14277#4      CCTTCATCCCTGNCATCTTTGATGCTTTTCAATTTGGCCNATCT--G----GNGGCTTAG 215
consensus_14277#2      AGTTTGTTCGCAAATGGAAGACCGTTGAAAGCTCTAGCAATATGTGGATTAGCAACCAAA 278
                                                                                   

consensus_14277#0      GGAGAGTAGGAATAACATATGGCCCATTAGTTGAAAGGGATAGAAAGATAAGTGAACACC 460
consensus_14277#5      ------------------------------------------------------------
consensus_14277#1      GGAGAGAAGGTATTAGATATGGCCCAATGGTTGAAAGGGATAGGATAAGAATTGAGTATC 471
consensus_14277#3      GGAGAGTAGGAATAACATATGGCCCATTAGTTGAGAGGGATAGAAAGAGAAGTGAACACC 318
consensus_14277#4      TGGCCCCAAGGGN--CATTCGG---GTGGGTTTAAAG---CAGGGTGCATTCTTAATGNC 267
consensus_14277#2      TAGTGATAGTAGAAAGAGATGTGATGTTGCTCAAAAC--CTGGAAGGCTATTCAAGTTGT 336
                                                                                   

consensus_14277#0      TCGATGACCTCATTTGGAGAAATGATATAACTTGTATCAA----CATGCTTAGACTTAGA 516
consensus_14277#5      ------------------------------------------------------------
consensus_14277#1      TAGAAACGAAAATTTGGAGGAATGATACAACTTGTATTGA----TATGCTTAGACTTAGA 527
consensus_14277#3      TCGATGACCTCATTTGGAGAAGTGATATAACTTGTATCAA----CATGCTTAGACTTAGA 374
consensus_14277#4      ATGGTGCTTAGAAGTTGGGNATGGA---AAGGTTTTCGAA----CACNACTTCACCGGGG 320
consensus_14277#2      CCCATAGAT-CATCAGGTAGTTCATTCCCAACTGTGCTAGACCTTATTATGGCATTTGCT 395
                                                                                   

consensus_14277#0      AAATCATCTTTCTTTCGATTTTGTAAACTTTTTAGAGATCGTGGCTTGCTTGAAGATACC 576
consensus_14277#5      ------------------------------------------------------------
consensus_14277#1      AGAGGAAGTTTTTTTCGTTTTTGTAAGCTGTTTAGGGATTGTGGTTTACTTGAAGATACC 587
consensus_14277#3      AAATCATCTTTCTTTCGATTTTGTAAACTTTTTAGAGATCGTGGCTTGCTTGAAGATACC 434
consensus_14277#4      AATCAG------------------------------------------------------ 326
consensus_14277#2      AGTTTGTCACTAGCTCTGTCAAATGCACCAACCAAACCATCATCGTCATGTGCATATGTC 455
                                                                                   

consensus_14277#0      ATCAACGTGTGTGTTGAGGAACAAGTTGCTATGTTTTTACATACAATTGGACACAATCTT 636
consensus_14277#5      ------------------------------------------------------------
consensus_14277#1      ATCCACATGTGTATTGAGGAACAAGTTGCTATGTTTCTGCATACGGTGGGGCATAACCTT 647
consensus_14277#3      ATCAACGTGTGTGTTGAGGAACAAGTTGCTATGTTTTTACATACAATTGGACACAATCTT 494
consensus_14277#4      ------------------------------------------------------------
consensus_14277#2      TTTTGTCTCTTGGGCTTGCTAGCCGATGATCTCTCATCATGATCTATTGTGGGAGCATCT 515
                                                                                   

consensus_14277#0      AGAAATAGGGTAGTTGGTGCTACTTTCCGTAGGTCAGGAGAAATAGTTAGTCGATATTTT 696
consensus_14277#5      ------------------------------------------------------------
consensus_14277#1      AGAAATAGGTTAGTCCGCACTAATTATGATAGGTCTGGAGAAACAGTAAGTCGTTATTTC 707
consensus_14277#3      AGAAATAGGGTAGTTGGTGCTACTTTCCGTAGGTCAGGAGAAACAGTTAGTCGATATTTT 554
consensus_14277#4      ------------------------------------------------------------
consensus_14277#2      TCATTCACTTCATTCTCTGTACCCTCGACATCTTCAGTGCCTAGAACTGAGCTTGAGTCC 575
                                                                                   

consensus_14277#0      AATTTGGTACTTCATGCGGTTGGAGAGTTATGAAATGATCTTATCAAGCCCCCATCTTTG 756
consensus_14277#5      ------------------------------------------------------------
consensus_14277#1      AACAAAGTCCTTCATGCAATTGGTGAGCTACGAGATGAACTTATCAGACCCCCCTCATTG 767
consensus_14277#3      AATTTGGTACTTCATGCGGTTGGAGAGTTACGAAATGATCTTATCAAGCCCCCATCTTTG 614
consensus_14277#4      ------------------------------------------------------------
consensus_14277#2      TTTGCAAAATTTCCTATAGCCATGGTACTACCAAATATGGTAAGCATCTCACCATAGTTG 635
                                                                                   

consensus_14277#0      GACATCG--CACCTAAAATAGCAGGCA--ACCACAGATGGGATCCATACATTAAGGATTG 812
consensus_14277#5      ------------------------------------------------------------
consensus_14277#1      GACACTC--CAACTAAAATAGCAGGAA--ATCCTAGATGGGATCCTTACTTTAAGGATTG 823
consensus_14277#3      GACATCG--CACCTAAAATAGCAGGCA--ACCACAGATGGGATCCATACTTTAAGGATTG 670
consensus_14277#4      ------------------------------------------------------------
consensus_14277#2      GTAATAGGCCTGTTGAAAAACTCAGCATCGCTCTTGTTGTTATGCTGCATATAGTCATTG 695
                                                                                   

consensus_14277#0      TATTGGAGCTATTGATGGCACACATGTTAGAGCATCTGTCCCAAAGAACATGGAGTCGTC 872
consensus_14277#5      ------------------------------------------------------------
consensus_14277#1      TATTGGAGCTATTGATGGCACACATATTAGAGCCTCTATTCGTAAGAATGTGGAGTCTTC 883
consensus_14277#3      TATTGGAGCTATTGATGGCACACATGTTAGAGCATTTGTCCCAAAGAACATGGAGTCGTC 730
consensus_14277#4      ------------------------------------------------------------
consensus_14277#2      TAGTGCTCCTCGTCAAGGCTAATAATGAAGTTCTCTTCGTCCCAAATAGCTCCACTCACC 755
                                                                                   

consensus_14277#0      TTTTCGTGGTAGGAAGAATCATGCTACACAAAATGTAATGGCAGCAGTAGATTTTGATCT 932
consensus_14277#5      ------------------------------------------------------------
consensus_14277#1      TTTTCGTGGTAGGAAGTCCCATGCCACACAAAATGTAATGGCGGCCGTAGATTTTGATCT 943
consensus_14277#3      TTTTCGTGGTAGGAAGAATCATGCTACACAAAATGTAATGGCAGCAGTAGATTTTGATCT 790
consensus_14277#4      ------------------------------------------------------------
consensus_14277#2      TTCCTAAGACGACTAATCTTTTGAAACTTCTTATGCCATGTCTTCAAATGATTTCTAATC 815
                                                                                   

consensus_14277#0      TCGGTTCACATATGTGTTGGCTGGTTGGGAGGGGGCTGCACATGATGTTGTAGTTTTAAG 992
consensus_14277#5      ------------------------------------------------------------
consensus_14277#1      TCGGTTTACTTATGTCCTGGCTGGTTGGGAGGGGACAACACATGATGCTGTAGTTTTAAG 1003
consensus_14277#3      TCGGTTCACAT------------------------------------------------- 801
consensus_14277#4      ------------------------------------------------------------
consensus_14277#2      TGATCCCCGGTGAGTGTTGTCGAAAACTTTTCATTCACAACTCTAGCACATGCATTGAGA 875
                                                                                   

consensus_14277#0      AGATGCTTTGGAACGTGAAAATGGTCTTCATGTCCCCCAAGGAAAATTCTACCTAGTTGA 1052
consensus_14277#5      ------------------------------------------------------------
consensus_14277#1      AGATGCTTTGGAACGTGAAAATGGCCTTCATGTCCCACAAGGAAAATTCTATCTAGTTGA 1063
consensus_14277#3      ------------------------------------------------------------
consensus_14277#4      ------------------------------------------------------------
consensus_14277#2      TGCACCTGCTTAAAACCAGCCGATGTCCTTGTGCCACTAGCCACCAGATTGGCCAAAT-- 933
                                                                                   

consensus_14277#0      TGTTGGATACGGAGCCAAACCGGGATTTTTGCCACCCTTTAGAAGCACCCGGTATCATCT 1112
consensus_14277#5      ------------------------------------------------------------
consensus_14277#1      TGCTGGATATGGAGCCAAACAAGGATTCTTGCCTCCTTTTCGTGCTGTCCGGTACCACTT 1123
consensus_14277#3      ------------------------------------------------------------
consensus_14277#4      ------------------------------------------------------------
consensus_14277#2      TGGAGAGCATCAAAGATGACATGGATGATGTCCATGAGGCTACAACTCCCTTTCCGTTGT 993
                                                                                   

consensus_14277#0      AAATGAGTGGGGAAACAATCCGGTCCAAAATGAGAAGGAGTTGTTCAACCTTAGACACTC 1172
consensus_14277#5      ------------------------------------------------------------
consensus_14277#1      GAAAGAGTGGGGGAATAATCCGGTGCAAAATGAGAAGGAGTTGTTCAACCTTAGACACTA 1183
consensus_14277#3      ------------------------------------------------------------
consensus_14277#4      ------------------------------------------------------------
consensus_14277#2      TGGTGTCCATATCCTAGCTTGACAACACAGGAAGCGGTCCGTTGAAAAACAATCTCACTA 1053
                                                                                   

consensus_14277#0      ATCCCTTCGTATCACTGTTGAACGTGCATTTGGGTCACTGAAGAGGAGGTTCAAAATTCT 1232
consensus_14277#5      ------------------------------------------------------------
consensus_14277#1      ATCCCTCCGTAT-ACGGTTGAACGTGCATTTGGGTCACTAAAGAGGAGGTTCAAAGTTCT 1242
consensus_14277#3      ------------------------------------------------------------
consensus_14277#4      ------------------------------------------------------------
consensus_14277#2      GATCAGCCTCCTAACCTCCAGATGCCCGGCGCCGTCTCTACCGACCGTCAGCTCGAGCGC 1113
                                                                                   

consensus_14277#0      TGATGATGCCACACCATTTTTCCCCTTTCAGACTCAAGTAAACATTGTTGTAGCTTGTTG 1292
consensus_14277#5      ------------------------------------------------------------
consensus_14277#1      AGATGATGCCACTCCATTCTTCCCATTTCGAACTCAAGTAGATATTGTTGTAACTTGTTG 1302
consensus_14277#3      ------------------------------------------------------------
consensus_14277#4      ------------------------------------------------------------
consensus_14277#2      CCGCGCCGCCGCTCGCAAACGAGAGAGAAAGCGAGAGAAAGGTGTGATCCCCTCACCCCC 1173
                                                                                   

consensus_14277#0      TATTATTCATAATTGGGTGATAAATGATGATATTGATGAGCTTGTGAT--GGGCCCAAAT 1350
consensus_14277#5      -----------------------------------------TTGTGGATGGGGCCCCAAT 19
consensus_14277#1      TATTATTCATAACTGGGTCATAAATGACGGAATTGATGAGCTTATA------GCTCCATC 1356
consensus_14277#3      ------------------------------------------------------------
consensus_14277#4      ------------------------------------------------------------
consensus_14277#2      CTCTCCCTCTGTGCGTGCGATGCGCCAGCA------------------------------ 1203
                                                                                   

consensus_14277#0      GAGT-CCATAATT-CAAGACA--ACGA-TACTTCTACGGTTGGCCAACC-AAACG-ACCA 1403
consensus_14277#5      GAGTGCCATAATTGCAAGACNCAGCGAGTACTTCTTCGGTTGGCCAACCGAAATGTACCA 79
consensus_14277#1      TGATTGGACAAGT-GAGGACA---TTGATGAATCGTCAACCGGCCAAGC-GAATG-ACCA 1410
consensus_14277#3      ------------------------------------------------------------
consensus_14277#4      ------------------------------------------------------------
consensus_14277#2      ------------------------------------------------------------
                                                                                   

consensus_14277#0      CGCATGGATGGTTCAATTTAGGCAAGGACTTGCAGATCAG-ATGTGGGCC--GATCGTCA 1460
consensus_14277#5      TGCAGGGATGGTTCAATTTAGGTAAGGACTTGCAGATCAGTATGNTGGNCCCGATCGTCA 139
consensus_14277#1      TGCATTGATGGTTTAGTTTAGGCAGGGTTTAGCTGATCAG-ATGTGGGCT--GACCGTAA 1467
consensus_14277#3      ------------------------------------------------------------
consensus_14277#4      ------------------------------------------------------------
consensus_14277#2      ------------------------------------------------------------
                                                                                   

consensus_14277#0      AAATCACC--ATGGAAACTAAATTGTGCTTGTACTA-TTTAGCATTTCAAAAACATGTTT 1517
consensus_14277#5      AAATCACCCAGTGGAAACTAAATTGTGCNTGTACTAGTTTAGCATTTCAAAAACATGTTT 199
consensus_14277#1      TAACCATC--ATGGAGTGTAATATGTAGCCATGCAACTTGTATTTCTACCTTATTTGCTA 1525
consensus_14277#3      ------------------------------------------------------------
consensus_14277#4      ------------------------------------------------------------
consensus_14277#2      ------------------------------------------------------------
                                                                                   

consensus_14277#0      GCATTCCTTTGTGTGGATGTATTGTCAAGACTAAATTTATTTGTAGTTGTACTATTTGTA 1577
consensus_14277#5      GCATTCCTTTGTGTGGATGTATTGTCAAGACTAAATTTATTTGTAGTTGTACTATTTGTA 259
consensus_14277#1      CATTTCATTTGTATT-ATGAACTTCTTTTATTTATTTAATTCGTGTGGAC---------- 1574
consensus_14277#3      ------------------------------------------------------------
consensus_14277#4      ------------------------------------------------------------
consensus_14277#2      ------------------------------------------------------------
                                                                                   

consensus_14277#0      TGGACTACTTGTATGATGAATTTAAATTGT-ACGAACATATGTATTGATGTATTACTCTT 1636
consensus_14277#5      TGGACTACTTGTATGATGAATTTAACCTGTCACGAACATATGTATTGATGTATTAAAAA- 318
consensus_14277#1      ------------------------------------------------------------
consensus_14277#3      ------------------------------------------------------------
consensus_14277#4      ------------------------------------------------------------
consensus_14277#2      ------------------------------------------------------------
                                                                                   

consensus_14277#0      GAATGAAAAAAAAAAAAAA 1655
consensus_14277#5      -------------------
consensus_14277#1      -------------------
consensus_14277#3      -------------------
consensus_14277#4      -------------------
consensus_14277#2      -------------------
                                          




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)