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Oryza sativa
cluster # 14307 cluster # 14307       Sequences # 16       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_14307#0 length = 1533 sequences # 15  
consensus_14307#1 length = 371 sequences # 1  

consensusID : consensus_14307#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 15
consensus length = 1533
fasta sequence
                              [ACCTGCGCCACCACCACCACCGTTCGTCCGCTCGCCGCGTCGACGAGCTCCTCCTCCGCTTCGCGCTTCGTGTCAGGGTTTGGAGTGGAGTGGAGGGGGAAGGAAAAGGGGGAGGGATGATGCACGCGAAGTCGGAGTCGGACGTGACGAGCCTGGCGCCGTCGTCGCCGCCGCGGTCGCCGAAGAGGGGCGGCGGCGTGGGCGTGGGCGGCGCGAACTACTACGTGCAGAGCCCGTCGCGGGAGTCGCACGACGGCGGGTACAAGTCGTCGTCGATGCAGGCGACGCCGGTGTACAACAGCCCGAACGAGTCGCCGTCGCACCCTTCCTACGGCCGCCACTCCCGCTCCTCCTCCGTCAGCCGCTTCTCCGGCACCCTCCGCGACGGCTCCCGCAAGGCCGGCGGCGAGCGCAAGGCGCTCAACGACAAGGGCTGGCCCGAGTGCAACGTCATCGAGGAGGAGGGCCCCTACGAGGACCTCGCCGGCGACACCGGCCTCTCCCGCCGCTGCCAGATCGTCCTCGGCTTCCTCTGCTTCGTCCTCCTCTTCACCGTCTTCTGCCTCATCATCTGGGGCGCCGCTCGCCCCTACGAGCCCGACGTCGTCGTCAAGAGCTTGACGATGGATGATTTCTACGCTGGTGAGGGCACAGACCACAGTGGGGTTCCAACCAAATTGGTTACACTGAACTGCTCTCTGCACATAGCTGTATACAACCCTGCTTCAATGTTTGGAATCCATGTCACGACGGGTCCTATTCGCCTTCTCTATTCAGAGATCTCTATCGGGGTTGGACAGGTTCGCAGGTACTACCAGCTGAGGAAGACCCTCCGGTTGGTGACGGCGGTGGTCCACGGCAACAAGGTGCCCCTCTACGGCGCCGGCGGCGGGCTGATGCTGTCGAGCTCCGGCGGCGCGGTGCCATTGACGCTGGACTTCGACCTCACCTCCCGGGGATACGTCATCGGCAAGCTGGTGAGGGTGACGCACAAGGTGCACGTGACGTGCCCCATCGTCGTCGACGCCAAGAAGACGAAGCCCATCAAGTTCTCCAAGAAGGCCTGCGCCGTCTACAAGATCTGAGAGGCCATCGTCG-CCGCCGCCGTCGCCGGTCGTCGTCCATC-ACGCCGGCGGCGGGCGTCGCCTGCAGTGATCGATCGGCGACGGAG-CCGTTC-TTCTGTTCTTG-CAGTTGTTGTAT-GTATTATGCTTGTGAAGAACAATAAGCGTTTATATGGTCACTTGTTAATTTTACTTGAGCTTCGA-TTTGTT-ATAAATCAGTAAATCACTTTGTA-TGGTA-GTAGTGTTTTATTTTCTCTGCTTTCTTTCTTTCCTGAGGAAACTATGTACCGAAGTGTGGTACTAGAGTCAGTCTAGATGGTTTTACGTTAAAGATCACCATGTTTACAGTTTCGCATGGACAATCACTGCATTTTGTTTTGAACAGAGCATATTAAACAGCAAGCAAAAATCGTGTTTCTTTTCACCTCAAAAAAAAAAACAAACCTGTCTTTCAAGGATTAAAAAAAAAAAA]

[+] EMBL AK060328             [ACCTGCGCCACCACCACCACCGTTCGTCCGCTCGCCGCGTCGACGAGCTCCTCCTCCGCTTCGCGCTTCGTGTCAGGGTTTGGAGTGGAGTGGAGGGGGAAGGAAAAGGGGGAGGGATGATGCACGCGAAGTCGGAGTCGGACGTGACGAGCCTGGCGCCGTCGTCGCCGCCGCGGTCGCCGAAGAGGGGCGGCGGCGTGGGCGTGGGCGGCGCGAACTACTACGTGCAGAGCCCGTCGCGGGAGTCGCACGACGGCGGGTACAAGTCGTCGTCGATGCAGGCGACGCCGGTGTACAACAGCCCGAACGAGTCGCCGTCGCACCCTTCCTACGGCCGCCACTCCCGCTCCTCCTCCGTCAGCCGCTTCTCCGGCACCCTCCGCGACGGCTCCCGCAAGGCCGGCGGCGAGCGCAAGGCGCTCAACGACAAGGGCTGGCCCGAGTGCAACGTCATCGAGGAGGAGGGCCCCTACGAGGACCTCGCCGGCGACACCGGCCTCTCCCGCCGCTGCCAGATCGTCCTCGGCTTCCTCTGCTTCGTCCTCCTCTTCACCGTCTTCTGCCTCATCATCTGGGGCGCCGCTCGCCCCTACGAGCCCGACGTCGTCGTCAAGAGCTTGACGATGGATGATTTCTACGCTGGTGAGGGCACAGACCACAGTGGGGTTCCAACCAAATTGGTTACACTGAACTGCTCTCTGCACATAGCTGTATACAACCCTGCTTCAATGTTTGGAATCCATGTCACGACGGGTCCTATTCGCCTTCTCTATTCAGAGATCTCTATCGGGGTTGGACAGGTTCGCAGGTACTACCAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AK106071             [  CTGCGCCACCACCACCACCGTTCGTCCGCTCGCCGCGTCGACGAGCTCCTCCTCCGCTTCGCGCTTCGTGTCAGGGTTTGGAGTGGAGTGGAGGGGGAAGGAAAAGGGGGAGGGATGATGCACGCGAAGTCGGAGTCGGACGTGACGAGCCTGGCGCCGTCGTCGCCGCCGCGGTCGCCGAAGAGGGGCGGCGGCGTGGGCGTGGGCGGCGCGAACTACTACGTGCAGAGCCCGTCGCGGGAGTCGCACGACGGCGGGTACAAGTCGTCGTCGATGCAGGCGACGCCGGTGTACAACAGCCCGAACGAGTCGCCGTCGCACCCTTCCTACGGCCGCCACTCCCGCTCCTCCTCCGTCAGCCGCTTCTCCGGCACCCTCCGCGACGGCTCCCGCAAGGCCGGCGGCGAGCGCAAGGCGCTCAACGACAAGGGCTGGCCCGAGTGCAACGTCATCGAGGAGGAGGGCCCCTACGAGGACCTCGCCGGCGACACCGGCCTCTCCCGCCGCTGCCAGATCGTCCTCGGCTTCCTCTGCTTCGTCCTCCTCTTCACCGTCTTCTGCCTCATCATCTGGGGCGCCGCTCGCCCCTACGAGCCCGACGTCGTCGTCAAGAGCTTGACGATGGATGATTTCTACGCTGGTGAGGGCACAGACCACAGTGGGGTTCCAACCAAATTGGTTACACTGAACTGCTCTCTGCACATAGCTGTATACAACCCTGCTTCAATGTTTGGAATCCATGTCACGACGGGTCCTATTCGCCTTCTCTATTCAGAGATCTCTATCGGGGTTGGACAGGTTCGCAGGTACTACCAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AK073824             [   TGCGCCACCACCACCACCGTTCGTCCGCTCGCCGCGTCGACGAGCTCCTCCTCCGCTTCGCGCTTCGTGTCAGGGTTTGGAGTGGAGTGGAGGGGGAAGGAAAAGGGGGAGGGATGATGCACGCGAAGTCGGAGTCGGACGTGACGAGCCTGGCGCCGTCGTCGCCGCCGCGGTCGCCGAAGAGGGGCGGCGGCGTGGGCGTGGGCGGCGCGAACTACTACGTGCAGAGCCCGTCGCGGGAGTCGCACGACGGCGGGTACAAGTCGTCGTCGATGCAGGCGACGCCGGTGTACAACAGCCCGAACGAGTCGCCGTCGCACCCTTCCTACGGCCGCCACTCCCGCTCCTCCTCCGTCAGCCGCTTCTCCGGCACCCTCCGCGACGGCTCCCGCAAGGCCGGCGGCGAGCGCAAGGCGCTCAACGACAAGGGCTGGCCCGAGTGCAACGTCATCGAGGAGGAGGGCCCCTACGAGGACCTCGCCGGCGACACCGGCCTCTCCCGCCGCTGCCAGATCGTCCTCGGCTTCCTCTGCTTCGTCCTCCTCTTCACCGTCTTCTGCCTCATCATCTGGGGCGCCGCTCGCCCCTACGAGCCCGACGTCGTCGTCAAGAGCTTGACGATGGATGATTTCTACGCTGGTGAGGGCACAGACCACAGTGGGGTTCCAACCAAATTGGTTACACTGAACTGCTCTCTGCACATAGCTGTATACAACCCTGCTTCAATGTTTGGAATCCATGTCACGACGGGTCCTATTCGCCTTCTCTATTCAGAGATCTCTATCGGGGTTGGACAGGTTCGCAGGTACTACCAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AK058295             [             CCACCACCGTTCGTCCGCTCGCCGCGTCGACGAGCCCCTCCTCCGCTTCGCGCTTCGTGTCAGGGTTTGGAGTGGAGTGGAGGGGGAAGGAAAAGGGGGAGGGATGATGCACGCGAAGTCGGAGTCGGACGTGACGAGCCTGGCGCCGTCGTCGCCGCCGCGGTCGCCGAAGAGGGGCGGCGGCGTGGGCGTGGGCGGCGCGAACTACTACGTGCAGAGCCCGTCGCGGGAGTCGCACGACGGCGGGTACAAGTCGTCGTCGATGCAGGCGACGCCGGTGTACAACAGCCCGAACGAGTCGCCGTCGCACCCTTCCTACGGCCGCCACTCCCGCTCCTCCTCCGTCAGCCGCTTCTCCGGCACCCTCCGCGACGGCTCCCGCAAGGCCGGCGGCGAGCGCAAGGCGCTCAACGACAAGGGCTGGCCCGAGTGCAACGTCATCGAGGAGGAGGGCCCCTACGAGGACCTCGCCGGCGACACCGGCCTCTCCCGCCGCTGCCAGATCGTCCTCGGCTTCCTCTGCTTCGTCCTCCTCTTCACCGTCTTCTGCCTCATCATCTGGGGCGCCGCTCGCCCCTACGAGCCCGACGTCGTCGTCAAGAGCTTGACGATGGATGATTTCTACGCTGGTGAGGGCACAGACCACAGTGGGGTTCCAACCAAATTGGTTACACTGAACTGCTCTCTGCACATAGCTGTATACAACCCTGCTTCAATGTTTGGAATCCATGTCACGACGGGTCCTATTCGCCTTCTCTATTCAGAGATCTCTATCGGGGTTGGACAGGTTCGCAGGTACTACCAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CB656365             [               ACCACCGTTCGTCTGCTCGCCGCGTCGACGAGCTCCTCCTCCGCTTCGCGCTTCGTGTCAGGGTTTGGAGTGGAGTGGAGGGGGAAGGAAAAGGGGGAGGGATGATGCACGCGAAGTCGGAGTCGGACGTGACGAGCCTGGCGCCGTCGTCGCCGCCGCGGTCGCCGAAGAGGGGCGGCGGCGTGGGCGTGGGCGGCGCGAACTACTACGTGCAGAGCCCGTCGCGGGAGTCGCACGACGGCGGGTACAAGTCGTCGTCGATGCAGGCGACGCCGGTGTACAACAGCCCGAACGAGTCGCCGTCGCACCCTTCCTACGGCCGCCACTCCCGCTCCTCCTCCGTCAGCCGCTTCTCCGGCACCCTCCGCGACGGCTCCCGCAAGGCCGGCGGCGAGCGCAAGGCGCTCAACGACAAGGGCTGGCCCGAGTGCAACGTCATCGAGGAGGAGGGCCCCTACGAGGACCTCGCCGGCGACACCGGCCTCTCCCGCCGCTGCCAGATCGTCCTCGGCTTCCTCTGCTTCGTCCTCCTCTTCACCGTCTTCTGCCTCATCATCTGGGGCGCCGCTCGCCCCTACGAGCCCGACGTCGTCGTCAAGAGCTTGACGATGGATGATTTCTACGCTGGTGAGGGCACAGACCACAGTGGGGTTCCAACCAAATTGGTTACACTGAACTGCTCTCTGCACATAGCTGTATACAACCCTGCTTCAATGTTTGGAATCCATGTCACGACGGGTCCTATTCGCCTTCTCTATTCAGAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CB680694             [                    CGTTCGCCCGCTCGCCGCGTCGACGAGCTCCTCCTCCGCTTCGCGCTTCGTGTCAGGGTTTGGAGTGGAGTGGAGGGGGAAGGAAAAGGGGGAGGGATGATGCACGCGAAGTCGGAGTCGGACGTGACGAGCCTGGCGCCGTCGTCGCCGCCGCGGTCGCCGAAGAGGGGCGGCGGCGTGGGCGTGGGCGGCGCGAACTACTACGTGCAGAGCCCGTCGCGGGAGTCGCACGACGGCGGGTACAAGTCGTCGTCGATGCAGGCGACGCCGGTGTACAACAGCCCGAACGAGTCGCCGTCGCACCCTTCCTACGGCCGCCACTCCCGCTCCTCCTCCGTCAGCCGCTTCTCCGGCACCCTCCGCGACGGCTCCCGCAAGGCCGGCGGCGAGCGCAAGGCGCTCAACGACAAGGGCTGGCCCGAGTGCAACGTCATCGAGGAGGAGGGCCCCTACGAGGACCTCGCCGGCGACACCGGCCTCTCCCGCCGCTGCCAGATCGTCCTCGGCTTCCTCTGCTTCGTCCTCCTCTTCACCGTCTTCTGCCTCATCATCTGGGGCGCCGCTCGCCCCTACGAGCCCGACGTCGTCGTCAAGAGCTTGACGATGGATGATTTCTACGCTGGTGAGGGCACAGACCACAGTGGGGTTCCAACCAAATTGGTTACACTGAACTGCTCTCTGCACATAGCTGTATACAACCCTGCTTCAATGTTTGGAATCCATGTCACGACGGGTCCTATTCGCCTTCTCTATTCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL OSR26341A            [                             GCTCGCCGCGTCGACGAGCTCCTCCTCCGCTTCGCGCTTCGTGTCAGGGTTTGGAGTGGAGTGGAGGGGGAAGGAAAAGGGGGAGGGATGATGCACGCGAAGTCGGAGTCGGACGTGACGAGCCTGGNGCCGTCGTTGCCGNCGCGGTCGCCGAAGAGGGGCGGCGGCGTGGGCGTGGGCGGCGCGAACTACTACGTGCAGAGCCCGTCGCGGGAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CB680695             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ATCCATGTCAGGACGGGTCCTATTCGCCTTCTCTATTCAGAGATCTCTATCGGGGTTGGACAGGTTCGCAGGTACTACCACCTGAGGAAGACCCTCCGGTTGGTGACGGCGGTGGTCCACGGCAACAAGGTGCCCCTGTACGGCGCCGGCGGCGGGCTGATGCTGTCGAGCTCCGGCGGCGCGGTGCCATTGACGCTGGACTTCGACCTCACCTCCCGGGGATACGTCATCGGCAAGCTGGTGAGGGTGACGCACAAGGTGCACGTGACGTGCCCCATCGTCGTCGACGCCAAGAAGACGAAGCCCATCAAGTTCTCCAAGAAGGCCTGCGCCGTGTACAAGATCTGAGAGGCCATCGTCG CCCCGGCCGTCTCCGGTGGTCGTCCATC ACGCCGGCGGCGGGCGTCGCCTG                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL OS1321927            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CGGCAACAAGGTGCCCCTCTACGGCGCCGGCGGGGNGCTGATGCTGTCGAGCTCCGGCGGCGCGGTGCCATTNACGCTGGACTTCGACCTCACCTCCCGGGGATACGTCATCGGCAAGCTGGTGAGGGTGACGCACAAGGTGCACGTAACGT CCCCATCGTCGTCGACGCCAAGAAGACGAAGCCCATCAAGTTCTCCAAGAAGGCCTGCGCCGTCTACAAGATCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CB637407             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GGCAACAAGGTGCCCCTTTACGGCGCCGGCGGCGGGCTGATGCTGTCGAGCTCCGGCGGCGCGGTGCCATTGACGTTGGACTTCGACCTCACCTCCCGGGGATACGTCATCGGCAAGCTGGTGAGGGTGACGCACAAGGTGCACGTGACGTGCCCCATCGTCGTCGACGCCAAGAAGACGAAGCCCATCAAGTTCTCCAAGAAGGCCTGCGCCGTCTACAAGATCTGAGAGGCCATCGTCG CCGCCGCCGTCGCCGGTCGTCGTCCATC ACGCCGGCGGCGGGCGTCGCCTGCAGTGATCGATCGGCGACGGAG CCGTTC TTCTGTTCTTG CAGTTGTTGTAT GTATTATGCTTGTGAAGAACAATAAGCGTTTATATGGTCACTTGTTAATTTTACTTGAGCTTCGATTTTGTTGATAAATCAGTAAATCACTTTGTA TGGTA GTAGTGTTTTATTTTCTCTGCTTTCTTTCTTTCCTGAGGAAACTATGTACCGAAGTGTGGTACTAGAGTCAGTATAGATGG                                                                                                                                                         ]
[-] EMBL CB656366             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GGCAACAAGGTGCCCCTCTACGGCGCCGGCGGCGGGCTGATGCTGTCGAGCTCCGGCGGCGCGGTGCCATTGACGCTGGACTTCGACCTCACCTCCCGGGGATACGTCATCGGCAAGCTGGTGAGGGTGACGCACAAGGTGCACGTGACGTGCCCCATCGTCGTCGACGCCAAGAAGACGAAGCCCATCAAGTTCTCCAAGAAGGCCTGCGCCGTCTACAAGATCTGAGAGGCCATCGTCG CCGCCGCCGTCGCCGGTCGTCGTCCATC ACGCCGGCGGCGGGCGTCGCCTGCAGTGATCGATCGGCGACGGAG CCGTTC TTCTGTTCTTG CAGTTGGGGTAT GTATTATGCTTGTGAAGAACAATAAGCGTTTATATGGTCACTTGTTAATTTTACTTGAGCTTTTA AAGGTT ATAAATCAGTAA                                                                                                                                                                                                                                                            ]
[+] EMBL BM421152             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ttggTGTTGAGGGT ACGCACAAGGTGCACGTGACGTGCCCCATCGTCGTCGACGCCAAGAAGACGAAGCCCATCAAGTTCTCCAAGAAGGCCTGCGCCGTCTACAAGATCTGAGAGGCCATCGTCG CCGCCGCCGTCGCCGGTCGTCGTCCATC ACGCCGGCGGCGGGCGTCGCCTGCAGTGATCGATCGGCGACGGAG CCGTTC TTCTGTTCTTG CAGTTGTTGTAT GTATTATGCTTGTGAAGAACAATAAGCGTTTATATGGTCACTTGTTAATTTTACTTGAGCTTCGATTTTGTTGATAAATCAGTAAATCACTTTGTACTGGTACGTAGTGTTTTATTTTCTCTGCTTTCTTTCTTTCCTGAGGAAACTATGTACCGAAGTGTGGTACTAGAGTCAGTCTAGATGGTTTTACGTTAAAGATCACCATGTTTACAGTTTCGCATGGACAATCACTGCATTTTGTTTTGAACAGAGCATATTAAACAGCAAAAAAAAAa                                                              ]
[-] EMBL OS38004              [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GTGCACGTGACGTGCCCCATCGTCGTCGACGCCAAGAAGACGAAGCCCATCAAGTTCTCCAAGAAGGCCTGCGCCGTCTACAAGATCTGAGAGGCCATCGTCG CCGCCG CGTCGCCGGTCGTCGTCCATC AC CCGGCGGC GGCGTCGCCTGCAGTGATCGATCGGCGACGGAG CCGTTC TTCTGTTCTTG CAGTTGTTGTAT GTATTATGCTTGTGAAGAACAATAAGCGTTTATATGGTCACTTGT                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AU174417             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GTCTNCAAGATCTGAGAGGCCATNGTCG CCGCCGCCGTCGCCGGTCGTCGTCCATC ACGCCGGCGGCGGGCGTCGCCTGCAGTGATCGATCGGCGACGGAG CCGTTC TTCTGTTCTTG CAGTTGTTGTAT GTATTATGCTTGTGAAGAACAATAAGCGTTTATATGGTCNCTTGTTAATTTTACTTGAGCTTCGATTTTGTTGATAAATCAGTAAATCNCTTTGTA TGGTA GTAGTGTTTTATTTTCTCTGCTTTCTTTCTTTCCTGAGGAAACTATGTACCGAAGTGTGGTACTAGAGTCAGTCTAGATGGTTTTACGTTAAAGATCACCATGTTTACAGTTTCGCATGGACAATCACTGCATTTTGTTTTGAACAGAGCATATTAAACAGCAAGCAAAAATCGTGTTTCTTTTCACCTCAAAAAAAAAA                                  ]
[+] EMBL AU031922             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ATCGNCGCCCGCCGCCGTCGCCGGTCGTCGTCCATCTAC CCGGCGNCGGGCGTCGCCTGCAGTGATCGATCGGCGACGGAGCCCGTTCTTTCTGTTCTTGCCAGTTGTTGTATGGTATTATGCTTGTGAAGAACAATAAGCGTTTATATGGTCACTTGTTAATTTTACTTGAGCTTCGATTTTGTTGATAAATCAGTAAATCACTTTGTA TGGTA GTAGTGTTTTATTTTCTCTGCTTTCTTTCTTNCCTGAGGAAACTATGTACCGAAGTGTGGTACTAGAGTCAGTCTAGATGGTTTTACGTTAAAGATCACCATGTTTACAGTTTCGCATGGACAATCACTGCATTTTGTTTTGAACAGAGCATATTAAACAGCAAGCAAAAATCGTGTTTCTTTTCACCTCAAGAAATGGTACAAACCTGTCTTTCAAGGATTAAAAAAAAAAAA]


>consensus_14307#0 ACCTGCGCCACCACCACCACCGTTCGTCCGCTCGCCGCGTCGACGAGCTCCTCCTCCGCT TCGCGCTTCGTGTCAGGGTTTGGAGTGGAGTGGAGGGGGAAGGAAAAGGGGGAGGGATGA TGCACGCGAAGTCGGAGTCGGACGTGACGAGCCTGGCGCCGTCGTCGCCGCCGCGGTCGC CGAAGAGGGGCGGCGGCGTGGGCGTGGGCGGCGCGAACTACTACGTGCAGAGCCCGTCGC GGGAGTCGCACGACGGCGGGTACAAGTCGTCGTCGATGCAGGCGACGCCGGTGTACAACA GCCCGAACGAGTCGCCGTCGCACCCTTCCTACGGCCGCCACTCCCGCTCCTCCTCCGTCA GCCGCTTCTCCGGCACCCTCCGCGACGGCTCCCGCAAGGCCGGCGGCGAGCGCAAGGCGC TCAACGACAAGGGCTGGCCCGAGTGCAACGTCATCGAGGAGGAGGGCCCCTACGAGGACC TCGCCGGCGACACCGGCCTCTCCCGCCGCTGCCAGATCGTCCTCGGCTTCCTCTGCTTCG TCCTCCTCTTCACCGTCTTCTGCCTCATCATCTGGGGCGCCGCTCGCCCCTACGAGCCCG ACGTCGTCGTCAAGAGCTTGACGATGGATGATTTCTACGCTGGTGAGGGCACAGACCACA GTGGGGTTCCAACCAAATTGGTTACACTGAACTGCTCTCTGCACATAGCTGTATACAACC CTGCTTCAATGTTTGGAATCCATGTCACGACGGGTCCTATTCGCCTTCTCTATTCAGAGA TCTCTATCGGGGTTGGACAGGTTCGCAGGTACTACCAGCTGAGGAAGACCCTCCGGTTGG TGACGGCGGTGGTCCACGGCAACAAGGTGCCCCTCTACGGCGCCGGCGGCGGGCTGATGC TGTCGAGCTCCGGCGGCGCGGTGCCATTGACGCTGGACTTCGACCTCACCTCCCGGGGAT ACGTCATCGGCAAGCTGGTGAGGGTGACGCACAAGGTGCACGTGACGTGCCCCATCGTCG TCGACGCCAAGAAGACGAAGCCCATCAAGTTCTCCAAGAAGGCCTGCGCCGTCTACAAGA TCTGAGAGGCCATCGTCGCCGCCGCCGTCGCCGGTCGTCGTCCATCACGCCGGCGGCGGG CGTCGCCTGCAGTGATCGATCGGCGACGGAGCCGTTCTTCTGTTCTTGCAGTTGTTGTAT GTATTATGCTTGTGAAGAACAATAAGCGTTTATATGGTCACTTGTTAATTTTACTTGAGC TTCGATTTGTTATAAATCAGTAAATCACTTTGTATGGTAGTAGTGTTTTATTTTCTCTGC TTTCTTTCTTTCCTGAGGAAACTATGTACCGAAGTGTGGTACTAGAGTCAGTCTAGATGG TTTTACGTTAAAGATCACCATGTTTACAGTTTCGCATGGACAATCACTGCATTTTGTTTT GAACAGAGCATATTAAACAGCAAGCAAAAATCGTGTTTCTTTTCACCTCAAAAAAAAAAA CAAACCTGTCTTTCAAGGATTAAAAAAAAAAAA



consensusID : consensus_14307#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 371
fasta sequence
                              [GAACGAGGTAATTGTCACGCCCGGAATTTCTATCCAAAATTCCAAACGCTTACATGTGTGTGAACCCTCGTCCAGGTCGCCGCCGCCGTCGCCGGTCGTCGTCCATCACGCCGGCGGCGGGCGTCGCCTGCAGTGATCGATCGGCGACGGAGCCGTTCTTCTGTTCTTGCAGTTGTTGTATGTATTATGCTTGTGAAGAACAATAAGCGTTTATATGGTCACTTGTTAATTTTACTTGAGCTTCGATTTTGTTGATAAATCAGTAAATCACTTTGTATGGTAGTAGTGTTTTATTTTCTCTGCTTTCTTTCTTTCCTGAGGAAACTATGTACCGAAGTGTGGTACTAGAGTCAGTCTAGATGGTTTTACGT]

[-] EMBL BE530924             [GAACGAGGTAATTGTCACGCCCGGAATTTCTATCCAAAATTCCAAACGCTTACATGTGTGTGAACCCTCGTCCAGGTCGCCGCCGCCGTCGCCGGTCGTCGTCCATCACGCCGGCGGCGGGCGTCGCCTGCAGTGATCGATCGGCGACGGAGCCGTTCTTCTGTTCTTGCAGTTGTTGTATGTATTATGCTTGTGAAGAACAATAAGCGTTTATATGGTCACTTGTTAATTTTACTTGAGCTTCGATTTTGTTGATAAATCAGTAAATCACTTTGTATGGTAGTAGTGTTTTATTTTCTCTGCTTTCTTTCTTTCCTGAGGAAACTATGTACCGAAGTGTGGTACTAGAGTCAGTCTAGATGGTTTTACGT]


>consensus_14307#1 GAACGAGGTAATTGTCACGCCCGGAATTTCTATCCAAAATTCCAAACGCTTACATGTGTG TGAACCCTCGTCCAGGTCGCCGCCGCCGTCGCCGGTCGTCGTCCATCACGCCGGCGGCGG GCGTCGCCTGCAGTGATCGATCGGCGACGGAGCCGTTCTTCTGTTCTTGCAGTTGTTGTA TGTATTATGCTTGTGAAGAACAATAAGCGTTTATATGGTCACTTGTTAATTTTACTTGAG CTTCGATTTTGTTGATAAATCAGTAAATCACTTTGTATGGTAGTAGTGTTTTATTTTCTC TGCTTTCTTTCTTTCCTGAGGAAACTATGTACCGAAGTGTGGTACTAGAGTCAGTCTAGA TGGTTTTACGT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14307#0      ACCTGCGCCACCACCACCACCGTTCGTCCGCTCGCCGCGTCGACGAGCTCCTCCTCCGCT 60
consensus_14307#1      ------------------------------------------------------------
                                                                                   

consensus_14307#0      TCGCGCTTCGTGTCAGGGTTTGGAGTGGAGTGGAGGGGGAAGGAAAAGGGGGAGGGATGA 120
consensus_14307#1      ------------------------------------------------------------
                                                                                   

consensus_14307#0      TGCACGCGAAGTCGGAGTCGGACGTGACGAGCCTGGCGCCGTCGTCGCCGCCGCGGTCGC 180
consensus_14307#1      ------------------------------------------------------------
                                                                                   

consensus_14307#0      CGAAGAGGGGCGGCGGCGTGGGCGTGGGCGGCGCGAACTACTACGTGCAGAGCCCGTCGC 240
consensus_14307#1      ------------------------------------------------------------
                                                                                   

consensus_14307#0      GGGAGTCGCACGACGGCGGGTACAAGTCGTCGTCGATGCAGGCGACGCCGGTGTACAACA 300
consensus_14307#1      ------------------------------------------------------------
                                                                                   

consensus_14307#0      GCCCGAACGAGTCGCCGTCGCACCCTTCCTACGGCCGCCACTCCCGCTCCTCCTCCGTCA 360
consensus_14307#1      ------------------------------------------------------------
                                                                                   

consensus_14307#0      GCCGCTTCTCCGGCACCCTCCGCGACGGCTCCCGCAAGGCCGGCGGCGAGCGCAAGGCGC 420
consensus_14307#1      ------------------------------------------------------------
                                                                                   

consensus_14307#0      TCAACGACAAGGGCTGGCCCGAGTGCAACGTCATCGAGGAGGAGGGCCCCTACGAGGACC 480
consensus_14307#1      ------------------------------------------------------------
                                                                                   

consensus_14307#0      TCGCCGGCGACACCGGCCTCTCCCGCCGCTGCCAGATCGTCCTCGGCTTCCTCTGCTTCG 540
consensus_14307#1      ------------------------------------------------------------
                                                                                   

consensus_14307#0      TCCTCCTCTTCACCGTCTTCTGCCTCATCATCTGGGGCGCCGCTCGCCCCTACGAGCCCG 600
consensus_14307#1      ------------------------------------------------------------
                                                                                   

consensus_14307#0      ACGTCGTCGTCAAGAGCTTGACGATGGATGATTTCTACGCTGGTGAGGGCACAGACCACA 660
consensus_14307#1      ------------------------------------------------------------
                                                                                   

consensus_14307#0      GTGGGGTTCCAACCAAATTGGTTACACTGAACTGCTCTCTGCACATAGCTGTATACAACC 720
consensus_14307#1      ------------------------------------------------------------
                                                                                   

consensus_14307#0      CTGCTTCAATGTTTGGAATCCATGTCACGACGGGTCCTATTCGCCTTCTCTATTCAGAGA 780
consensus_14307#1      ------------------------------------------------------------
                                                                                   

consensus_14307#0      TCTCTATCGGGGTTGGACAGGTTCGCAGGTACTACCAGCTGAGGAAGACCCTCCGGTTGG 840
consensus_14307#1      ------------------------------------------------------------
                                                                                   

consensus_14307#0      TGACGGCGGTGGTCCACGGCAACAAGGTGCCCCTCTACGGCGCCGGCGGCGGGCTGATGC 900
consensus_14307#1      ------------------------------------------------------------
                                                                                   

consensus_14307#0      TGTCGAGCTCCGGCGGCGCGGTGCCATTGACGCTGGACTTCGACCTCACCTCCCGGGGAT 960
consensus_14307#1      ------------------------------------------------------------
                                                                                   

consensus_14307#0      ACGTCATCGGCAAGCTGGTGAGGGTGACGCACAAGGTGCACGTGACGTGCCCCATCGTCG 1020
consensus_14307#1      ----------------------------------------------------GAACGAGG 8
                                                                            * **  *

consensus_14307#0      TCGACGCCAAGAAGACGAAGCCCATCAAGTTCTCCAAGAAGGCCTGCGCCGTCTACAAGA 1080
consensus_14307#1      TAATTGTCACGCCCGGAATTTCTATCCAAAATTCCAA--ACGCTTACAT-GTGTGTGAAC 65
                       *    * ** *      *   * *** *    *****  * ** * *   ** *   *  

consensus_14307#0      TCTGAGAGGCCATCGTCGCCGCCGCCGTCGCCGGTCGTCGTCCATCACGCCGGCGGCGGG 1140
consensus_14307#1      CCTC----GTCCAGGTCGCCGCCGCCGTCGCCGGTCGTCGTCCATCACGCCGGCGGCGGG 121
                        **     * *   **********************************************

consensus_14307#0      CGTCGCCTGCAGTGATCGATCGGCGACGGAGCCGTTCTTCTGTTCTTGCAGTTGTTGTAT 1200
consensus_14307#1      CGTCGCCTGCAGTGATCGATCGGCGACGGAGCCGTTCTTCTGTTCTTGCAGTTGTTGTAT 181
                       ************************************************************

consensus_14307#0      GTATTATGCTTGTGAAGAACAATAAGCGTTTATATGGTCACTTGTTAATTTTACTTGAGC 1260
consensus_14307#1      GTATTATGCTTGTGAAGAACAATAAGCGTTTATATGGTCACTTGTTAATTTTACTTGAGC 241
                       ************************************************************

consensus_14307#0      TTCGATTT-GTT-ATAAATCAGTAAATCACTTTGTATGGTAGTAGTGTTTTATTTTCTCT 1318
consensus_14307#1      TTCGATTTTGTTGATAAATCAGTAAATCACTTTGTATGGTAGTAGTGTTTTATTTTCTCT 301
                       ******** *** ***********************************************

consensus_14307#0      GCTTTCTTTCTTTCCTGAGGAAACTATGTACCGAAGTGTGGTACTAGAGTCAGTCTAGAT 1378
consensus_14307#1      GCTTTCTTTCTTTCCTGAGGAAACTATGTACCGAAGTGTGGTACTAGAGTCAGTCTAGAT 361
                       ************************************************************

consensus_14307#0      GGTTTTACGTTAAAGATCACCATGTTTACAGTTTCGCATGGACAATCACTGCATTTTGTT 1438
consensus_14307#1      GGTTTTACGT-------------------------------------------------- 371
                       **********                                                  

consensus_14307#0      TTGAACAGAGCATATTAAACAGCAAGCAAAAATCGTGTTTCTTTTCACCTCAAAAAAAAA 1498
consensus_14307#1      ------------------------------------------------------------
                                                                                   

consensus_14307#0      AACAAACCTGTCTTTCAAGGATTAAAAAAAAAAAA 1533
consensus_14307#1      -----------------------------------
                                                          




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)