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Oryza sativa
cluster # 14380 cluster # 14380       Sequences # 16       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_14380#0 length = 1418 sequences # 15  
consensus_14380#1 length = 665 sequences # 1  

consensusID : consensus_14380#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 15
consensus length = 1418
fasta sequence
                              [TNCTTCTCTCCCGTTCCCGTAGCCTCTCTCCATCTCTCGCTCTCTTTCTCCTCGGTTTAAAGCTTCCTCGAGTCGCCTCCTCCGAATCCCCACAGCCCAGGCCAAAGGCAGCCTGAGCCAGGGTGGGGAGCTTCCTCTCCTCGTCTTCCTCCTCATCCTCCTGATCCCGGAAGGACCCCAGGATTACAAGTACTTCATGTCAATGACCAATCTAAGGAGGCGACTCCATCATGGAGATGTCGATGGAAGGAAGAATGAGCATGTTGACATATCCAGCGTAGATTCCCTTAATGAACCTTTACTAGGGAAATCTAGCTCTGATACTGGTGGATCAGAGGTATATGATCCC-AGAAGGCAAGACTTAT-GGGATGATGATAGAAAGAAGGAACAGCTACACTGGTC-ATTTCTTTTCTCAAATTTGATTGCGCAATGGGCACAATGGTTAGCAAATATTATTGTTGGCTCTGGATCACTATTTGGTAGATTGTTTCCCTTTTCGTTGGACAACCAGAACAGCAGTCCAGTGTATCTTAGTCCTTTGCAGGAAGATAGACTGAATACTTTAAGGTCTAGATTGCAAATCCCTTTCGATGGCTCCCGTGTTGAACACCAAGATGCTTTGAGACAACTTT-GGAGGTTAGCATACCCCAACCGTGACATTCCTCCACTGAAATCAGAACTATGGAAGGAGA-TGGGTTGGCAAGGCACTGATCCATCAACTGACTTCAGGGGTGGAGGATTCATATCATTGGAGAACCTCATATTTTTCGCTAGGAACTATCCTGGTTCCTTTCAGGCGCTTCTGAACAAAGTACAAGGGCAGAGAGCAGACTGGGAGTACCCTTTTGCGGTTGCTGGGATCAACA-TT-TCATTTATGCTGATCCA-AATGCTGGATCTACA-GTCAAGTGTTCCATCTTCAAAGTCAGGAGTTCGTTTTGTTGAACTGCTTGGACGAGATGAGAATGCATTTGATCACC-TCTACTGCATAGCCTTTCGGCTTCTCGATGCTCA-GTGGCTTGTGAAACGTGCTTCTTACATGGAGTTCAATGAGGTATTGAAATCTACAAGAACTCA-GTTGGAGCGTGAACTAGTACTAGAGGATGTATTGGAGGTGAAGGACCTGCCGTCTTACACAATGCTGGACAAATAATCCAAATAAGTAAGGGACTGTATGTGGCATTCAAGTGAAAAAAGTTATCCGGATCTGCAACTGATTTATGTTGGCGGGGCCTTTTGTTGTCTGACCATCTGAGTGCATATTTATCTTTTCCTTGTTCAAGAGAAAAATTCAGGCCTGTGTACATAGTGTTCATTTTCTGTAACTTATGACTCGCCATTTCAAGGCAATAATAAGCATCAAGTTGATCACA--AACTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL C72162               [TNCTTCTCTCCCGTTCCCGTAGCCTCTCTCCATCTCTCGCTCTCTTTCTCCTCGGTTTAAAGCTTCCTCGAGTCGCCTCCTCCGAATCCCCACAGCCCAGGCCAAA GCAGCCTGAGCCAGGGTGGGGAGCTTCCTCTCCTCGTCTTCCTCCTCATCCTCCTGATCCCGGAAGGACCCCAGGATTACAAGTACTTCATGTCAATGACCAATCTAAGGAGGCGACTCCATCATGGAGATGTCGATGGAAGGAAGAATGAGCATGTTGACATATCCAGCGTAGATTCCCTTAATGAACCTTTACTAGGGAAATCTAGCTCTGATACTGGTGGATCAGAGGTATATGATCCCAAGAAGGCAAGACTTATGGGGATGATGATAGAAAGAAGG ACAGCTACACTNGTCAATTTCTTTTCTCAAATTTGATTGCGNAATGGGCACAATGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL OSS1318A             [           CGTTCCCGTAGCCTCTCTCCATCTCTCGCTCTCTTTCTCCTCGGTTTAAAGCTTCCTCGAGTCGCCTCCTCCGAATCCCCACAGCCCAGGCCAAAGGCAGCCTGAGCCAGGGTGGGGAGCTTCCTCTCCTCGTCTTCCTCCTCATCCTCCTGATCCCGGAAGGACCCCAGGATTACAAGTACTTCATGTCAATGACCAATCTAAGGAGGCGACTCCATCATGGAGATGTCGATGGAAGGAAGAATGAGCATGTTGACATATCCAGCGTAGATTCCCTTAATGAACCTTTACTAGGGAAATCTAGCTCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AK101817             [                          TCTCCATCTCTCGCTCTCTTTCTCCTCGGTTTAAAGCTTCCTCGAGTCGCCTCCTCCGAATCCCCACAGCCCAGGCCAAAGGCAGCCTGAGCCAGGGTGGGGAGCTTCCTCTCCTCGTCTTCCTCCTCATCCTCCTGATCCCGGAAGGACCCCAGGATTACAAGTACTTCATGTCAATGACCAATCTAAGGAGGCGACTCCATCATGGAGATGTCGATGGAAGGAAGAATGAGCATGTTGACATATCCAGCGTAGATTCCCTTAATGAACCTTTACTAGGGAAATCTAGCTCTGATACTGGTGGATCAGAGGTATATGATCCC AGAAGGCAAGACTTAT GGGATGATGATAGAAAGAAGGAACAGCTACACTGGTC ATTTCTTTTCTCAAATTTGATTGCGCAATGGGCACAATGGTTAGCAAATATTATTGTTGGCTCTGGATCACTATTTGGTAGATTGTTTCCCTTTTCGTTGGACAACCAGAACAGCAGTCCAGTGTATCTTAGTCCTTTGCAGGAAGATAGACTGAATACTTTAAGGTCTAGATTGCAAATCCCTTTCGATGGCTCCCGTGTTGAACACCAAGATGCTTTGAGACAACTTT GGAGGTTAGCATACCCCAACCGTGACATTCCTCCACTGAAATCAGAACTATGGAAGGAGA TGGGTTGGCAAGGCACTGATCCATCAACTGACTTCAGGGGTGGAGGATTCATATCATTGGAGAACCTCATATTTTTCGCTAGGAACTATCCTGGTTCCTTTCAGGCGCTTCTGAACAAAGTACAAGGGCAGAGAGCAGACTGGGAGTACCCTTTTGCGGTTGCTGGGATCAACA TT TCATTTATGCTGATCCA AATGCTGGATCTACA GTCAAGTGTTCCATCTTCAAAGTCAGGAGTTCGTTTTGTTGAACTGCTTGGACGAGATGAGAATGCATTTGATCACC TCTACTGCATAGCCTTTCGGCTTCTCGATGCTCA GTGGCTTGTGAAACGTGCTTCTTACATGGAGTTCAATGAGGTATTGAAATCTACAAGAACTCA GTTGGAGCGTGAACTAGTACTAGAGGATGTATTGGAGGTGAAGGACCTGCCGTCTTACACAATGCTGGACAAATAATCCAAATAAGTAAGGGACTGTATGTGGCATTCAAGTGAAAAAAGTTATCCGGATCTGCAACTGATTTATGTTGGCGGGGCCTTTTGTTGTCTGACCATCTGAGTGCATATTTATCTTTTCCTTGTTCAAGAGAAAAATTCAGGCCTGTGTACATAGTGTTCATTTTCTGTAACTTATGACTCGCCATTTCAAGGCAATAATAAGCATCAAGT                                                          ]
[+] EMBL C99667               [                                            TTTCTCCTCGGTTTAAAGCTTCCTCGAGTCGCCTCCTCCGAATCCCCACAGCCCAGGCNANAGGCAGCCTGAGCNAGGGTGGGGANCTTCNNNNGNTNGTCTTCCTCCTCATCCTCCTGATCCCGGAAGGACCCCAGGATTACAAGTACTTCATGTCAATGACCAATCTAAGGAGGCGACTCCATCATGGAGATGTCGATGGAAGGAAGAATGAGCATGTTGACATATCCAGCGTAGATTCCCTTAATGAACCTTTACTAGGGAAATCTAGCTCTGATACTGGTGGATCAGAGGTATATGATCCC AGAAGGCAAGACTTAT GGGATGATGATAGAAAGAAGGAACAGCTACACTGGTC ATTTCTTTTCTCAAATTTGATTGCGCAATGGGCACAATGGTTAGCAAATATTATTGTNGGCTCTGGATCACTATTTGGTAGATTGTTTCCCTTTTCGTTGGACAACCAGAACAGCAGTCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CF319959             [                                                                                                   GGCCAAAGGCAGCCTGAGCCAGGGTGGGGAGCTTCCTCTCCTCGTCTTCCTCCTCATCCTCCTGATCCCGGAAGGACCCCAGGATTACAAGTACTTCATGTCAATGACCAATCTAAGGAGGCGACTCCATCATGGAGATGTCGATGGAAGGAAGAATGAGCATGTTGACATATCCAGCGTAGATTCCCTTAATGAACCTTTACTAGGGAAATCTAGCTCTGATACTGGTGGATCAGAGGTATATGATCCC AGAAGGCAAGACTTAT GGGATGATGATAGAAAGAAGGAACAGCTACACTGGTC ATTTCTTTTCTCAAATTTGATTGCGCAATGGGCACAATGGTTAGCAAATATTATTGTTGGCTCTGGATCACTATTTGGTAGATTGTTTCCCTTTTCGTTGGACAACCAGAACAGCAGTCCAGTGTATCTTAGTCCTTTGCAGGAAGATAGACTGAATACTTTAAGGTCTAGATTGCAAATCCCTTTCGATGGCTCCCGTGTTGAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CF323043             [                                                                                                                                                                gTGATCCCGGAAGGACCCCAGGATTACAAGTACTTCATGTCAATGACCAATCTAAGGAGGCGACTCCATCATGGAGATGTCGATGGAAGGAAGAATGAGCATGTTGACATATCCAGCGTAGATTCCCTTAATGAACCTTTACTAGGGAAATCTAGCTCTGATACTGGTGGATCAGAGGTATATGATCCC AGAAGGCAAGACTTAT GGGATGATGATAGAAAGAAGGAACAGCTACACTGGTC ATTTCTTTTCTCAAATTTGATTGCGCAATGGGCACAATGGTTAGCAAATATTATTGTTGGCTCTGGATCACTATTTGGTAGATTGTTTCCCTTTTCGTTGGACAACCAGAACAGCAGTCCAGTGTATCTTAGTCCTTTGC    AGATAGACTGAATACTTTAAGGTCTAGATTGCAAATCCCTTTCGATGGCTCCCGTGTTGAACACCAAGATGCTTTGAGACAACTTTGGGAGGTTAGCATACCCCAACCGTGACATTCCTCCACTGAAATCAGAACTATGGAAGGAGATTGGTTTGGCAAGGCACTGATCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CF306687             [                                                                                                                                                                          AAGGACCCCAGGATTACAAGTACTTCATGTCAATGACCAATCTAAGGAGGCGACTCCATCATGGAGATGTCGATGGAAGGAAGAATGAGCATGTTGACATATCCAGCGTAGATTCCCTTAATGAACCTTTACTAGGGAAATCTAGCTCTGATACTGGTGGATCAGAGGTATATGATCCC AGAAGGCAAGACTTAT GGGATGATGATAGAAAGAAGGAACAGCTACACTGGTC ATTTCTTTTCTCAAATTTGATTGCGCAATGGGCACAATGGTTAGCAAATATTATTGTTGGCTCTGGATCACTATTTGGTAGATTGTTTCCCTTTTCGTTGGACAACCAGAACAGCAGTCCAGTGTATCTTAGTCCTTTGCAGGAAGATAGACTGAATACTTTAAGGTCTAGATTGCAAATCCCTTTCGATGGCTCCCGTGTTGAACACCAAGATGCTTTGAGACAACTTTGGGAGGTTAGCATACCCCAACCGTGACATTCCTCCACTGAAATCAGAACTATGGAAGGAGA T                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CK085328             [                                                                                                                                                                                                                                                                                                  ATGAACCTTTACTAGGGAAATCTAGCTCTGATACTGGTGGATCAGAGGTATATGATCCC AGAAGGCAAGACTTAT GGGATGATGATAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AK058546             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TGGCTCCCGTGTTGAACACCAAGATGCTTTGAGACAACTTT GGAGGTTAGCATACCCCAACCGTGACATTCCTCCACTGAAATCAGAACTATGGAAGGAGA TGGGTTGGCAAGGCACTGATCCATCAACTGACTTCAGGGGTGGAGGATTCATATCATTGGAGAACCTCATATTTTTCGCTAGGAACTATCCTGGTTCCTTTCAGGCGCTTCTGAACAAAGTACAAGGGCAGAGAGCAGACTGGGAGTACCCTTTTGCGGTTGCTGGGATCAACA TT TCATTTATGCTGATCCA AATGCTGGATCTACA GTCAAGTGTTCCATCTTCAAAGTCAGGAGTTCGCTTTGTTGAACTGCTTGGACGAGATGAGAATGCATTTGATCACC TCTACTGCATAGCCTTTCGGCTTCTCGATGCTCA GTGGCTTGTGAAACGTGCTTCTTACATGGAGTTCAATGAGGTATTGAAATCTACAAGAACTCA GTTGGAGCGTGAACTAGTACTAGAGGATGTATTGGAGGTGAAGGACCTGCCGTCTTACACAATGCTGGACAAATAATCCAAATAAGTAAGGGACTGTATGTGGCATTCAAGTGAAAAAAGTTATCCGGATCTGCAACTGATTTATGTTGGCGGGGCCTTTTGTTGTCTGACCATCTGAGTGCATATTTATCTTTTCCTTGTTCAAGAGAAAAATTCAGGCCTGTGTACATAGTGTTCATTTTCTGTAACTTATGACTCGCCATTTCAAGGCAATAATAAGCAT                                                               ]
[+] EMBL AU093889             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GCAAGNCACTGATCCATCAACTGACTTCAGGGTTGGAGGATTCATATCATTGGAGACCCTCATATTTTTCGCTAGGAACTATCCTGGTNCCTTTCAGGCGCTTCTGAACAAAGTACAAGGGCAGAGAGCAGACTGGGAGTACCCTTTTGCGGTTGCTGGGATCAACA TT TCATTTATGCTGATCCA AATGCTGGATCTACA GTCAAGTGTTCCATCTTCAAAGTCAGGAGTTCGTTTTGTTGAACTGCTTGGACGAGATGAGAATGCATTTGATCACC TCTACTGCATA CCTTTCGGCTTCTCGATGCTCA GTGGCTTGTGAAACGTGCTTCTTACATGGAGTTCAATGAGGTATTGAAATCTACAAGAACTCA GTTGGAGCGTGAACTAGTACTAGAGGATGTATTGGAGGTGAAGGACCTGCCGTCTTACACAATGCTGGACAAATAATCCAAATAAGTAAGGGACTGTATGTGGCATTCAAGTGAAAAAAGTTATCCGGATCTGCAACTGATTTATGTTGGCGGGGCCTTTTGTTGTCTGACCATCTGAGTGCATATTTATCTTTTCCTTGTTCAAGAGAAAAATTCAGGCCTGTGTACATAGTGTTCATTTTCTGTAACTTATGACTCGCCATTTCAAGGCAATAATAAGCATCAAGTTGATCACA  AA  AAAAAAAAAAAAAAAAAAAAAAA                     ]
[+] EMBL BM420079             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CAAAGTACAA GGCAGAGA CAGACTGGGAGTACCCTTTT C GTTGCTGGGATCAACACTTGTCATTTATGCTGATCCACAATGCTGGATCTACACGTCAAGTGTTCCATCTTCAAAGTCAGGAGTTCGTTTTGTTGAACTGCTTGGACGAGATGAGAATGCATTTGATCACC TCTACTGCGTAGCCTTTCGGCTTCTTGATGCTCACGTGGCTTGTGAAACGTGCTTCTTACATGGAGTTCAATGAGGTATTGAAATCTACAAGAACTCACGTTGGAGCGTGAACTAGTACTAGAGGATGTATTGGAGGTGAAGGACCTCCCGTCTTACAC ATGCTGGACAAATAATCC AATAAGTAAGGGACTGTATGT GCATTCAAGTGAAAAAAGTTATCCGGATCT CAACTGATTTATGTT GCGGGCCCTTTT TTGTCGGACCATCNGAGTGCATATTTATC TTTCCTTGTTCAAGAGAAATATTCA GCCTGTGAACATAGTGTTCATTTTCTGTAACTTAGGACTCGCC TTTCAACGC ATAATAAGCATCAAGTTGATCAAA  AA                                              ]
[-] EMBL CF319960             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GTTCCATCTTCAAAGTCAGGAGTTCGTTTTGTTGAACTGCTTGGACGAGATGAGAATGCATTTGATCACCTTCTACTGCATAGCCTTTCGGCCTCTCGATGCTCA GTGGCTTGTGAAACGTGCTTCTTACATGGAGTTCAATGAGGTATTGAAATCTACAAGAACTCA GTTGGAGCGTGAACTAGTACTAGAGGATGTATTGGAGGTGAAGGACCTGCCGTCTTACACAATGCTGGACAAATAATCCAAATAAGTAAGGGACTGTATGTGGCATTCAAGTGAAAAAAGTTATCCGGATCTGCAACTGATTTATGTTGGCGGGGCCTTTTGTTGTCCGACCATCTGAGTGCATATTTATCTTTTCCTTGTTCAAGAGAAAAATTCAGGCCTGTGTACATAGTGTTCATTTTCTGTAACTTATGACTCGCCACTTCAAGGCAATAATAAGCATCAAGTTGATCAC    ACTAAAAAAA                                     ]
[+] EMBL CF313174             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GTGAAGGACCTGCCGTCTTACACAATGCTGGACAAATAATCCAAATAAGTAAGGGACTGTATGTGGCATTCAAGTGAAAAAAGTTATCCGGATCTGCAACTGATTTATGTTGGCGGGGCCTTTTGTTGTCTGACCATCTGAGTGCATATTTATCTTTTCCTTGTTCAAGAGAAAAATTCAGGCCTGTGTACATAGTGTTCATTTTCTGTAACTTATGACTCGCCATTTCAAGGCAATAATAAGCATCAAGTTGATCACACTATGTAGAATGTAAAAAAAAAAAAAAAAAAAAAAAAAA           ]
[+] EMBL BE040208             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TTACACAGTGCTGGACAAATAATCCAAATAAGTAAGGGACTGTATGTGGCATTCAAGTGAAAAAAGTTATCCGGATCTGCAACTGATTTATGTTGGCGGGGCCTTTTGTTGTCTGACCATCTGAGTGCATATTTATCTTTTCCTTGTTCAAGAGAAATATTCAGGCCTGTGTACATAGTGTTCATTTTCTGTAACTTATGACTCGCCATTTCAAGGCAATAATAAGCATCAAGTTGATCAC    ACTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL C99668               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ATGCTGGACAAATAATCCAAATAAGTAAGGGNCTGTATGTGGCATTCAAGTGAAAAAAGTTATCCGGATCTGCAACTGATTTATGTTGGCGGGGCCTTTTGTTGTCTGACCATCTGAGTGCATATTTATCTTTTCCTTGTTCAAGAGAAAAATTCAGGCCTGTGTACATAGTGTTCATTTTCTGTNACTTATGACTCGCCATTTCAAGGCNATAATAAGNATCAAGTTGATCNC    NCTAAAAAAAAAAAAAAAAAAAAAAAAAAA                 ]


>consensus_14380#0 TNCTTCTCTCCCGTTCCCGTAGCCTCTCTCCATCTCTCGCTCTCTTTCTCCTCGGTTTAA AGCTTCCTCGAGTCGCCTCCTCCGAATCCCCACAGCCCAGGCCAAAGGCAGCCTGAGCCA GGGTGGGGAGCTTCCTCTCCTCGTCTTCCTCCTCATCCTCCTGATCCCGGAAGGACCCCA GGATTACAAGTACTTCATGTCAATGACCAATCTAAGGAGGCGACTCCATCATGGAGATGT CGATGGAAGGAAGAATGAGCATGTTGACATATCCAGCGTAGATTCCCTTAATGAACCTTT ACTAGGGAAATCTAGCTCTGATACTGGTGGATCAGAGGTATATGATCCCAGAAGGCAAGA CTTATGGGATGATGATAGAAAGAAGGAACAGCTACACTGGTCATTTCTTTTCTCAAATTT GATTGCGCAATGGGCACAATGGTTAGCAAATATTATTGTTGGCTCTGGATCACTATTTGG TAGATTGTTTCCCTTTTCGTTGGACAACCAGAACAGCAGTCCAGTGTATCTTAGTCCTTT GCAGGAAGATAGACTGAATACTTTAAGGTCTAGATTGCAAATCCCTTTCGATGGCTCCCG TGTTGAACACCAAGATGCTTTGAGACAACTTTGGAGGTTAGCATACCCCAACCGTGACAT TCCTCCACTGAAATCAGAACTATGGAAGGAGATGGGTTGGCAAGGCACTGATCCATCAAC TGACTTCAGGGGTGGAGGATTCATATCATTGGAGAACCTCATATTTTTCGCTAGGAACTA TCCTGGTTCCTTTCAGGCGCTTCTGAACAAAGTACAAGGGCAGAGAGCAGACTGGGAGTA CCCTTTTGCGGTTGCTGGGATCAACATTTCATTTATGCTGATCCAAATGCTGGATCTACA GTCAAGTGTTCCATCTTCAAAGTCAGGAGTTCGTTTTGTTGAACTGCTTGGACGAGATGA GAATGCATTTGATCACCTCTACTGCATAGCCTTTCGGCTTCTCGATGCTCAGTGGCTTGT GAAACGTGCTTCTTACATGGAGTTCAATGAGGTATTGAAATCTACAAGAACTCAGTTGGA GCGTGAACTAGTACTAGAGGATGTATTGGAGGTGAAGGACCTGCCGTCTTACACAATGCT GGACAAATAATCCAAATAAGTAAGGGACTGTATGTGGCATTCAAGTGAAAAAAGTTATCC GGATCTGCAACTGATTTATGTTGGCGGGGCCTTTTGTTGTCTGACCATCTGAGTGCATAT TTATCTTTTCCTTGTTCAAGAGAAAAATTCAGGCCTGTGTACATAGTGTTCATTTTCTGT AACTTATGACTCGCCATTTCAAGGCAATAATAAGCATCAAGTTGATCACAAACTAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA



consensusID : consensus_14380#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 665
fasta sequence
                              [ATCATTGGAGAACCTCATATTTTTCGCTAGGAACTATCCTGGTTCCTTTCAGGCGCTTCTGAACAAAGTACAAGGGCAGAGAGCAGACTGGGAGTACCCTTTGCGGGTTGCTGGGATCAACATTTCATTTATGCTGATCCAAATGCTGGATCTACAGTCAAGTGTTCCATCTTCAAAGTCAGGAGTTCGTTTTGTTGAACTGCTTGGACGAGATGAGAATGCATTTGATCACCTTTACTGCGTAGCCTTTCGGCTTCTTGATGCTCAGTGGCTTGTGAAACGTGCTTCTTACATGGAGTTCAATGAGGTATTGAAATCTACAAGAACTCAGTTGGAGCGTGAACTAGTACTAGAGGATGTATTGGAGGTGAAGGACCTGCCGTTTTACACAATGCTGGACAAATAATCCAAATAAGTAAGGGACTGTATGTGGCATTCAAGTGAAAAAAGTTATCCGGATCTGCAACTGATTTATGTTGGCGGGGCCTTTTGTTGTCTGACCATTTGAGTGCATATTTATCTTTTCCTTGTTCAAGAAAAATATTCAGGCCTGTGTACATAGTGTTCATTTTCTGTAACTTATGACTCGCCATTTCAAGGCAATAATAAGCATCAAGTTGATCCCACTATGTAGTATGTACTCCTGTTAAAAAAAAAAAAAAAAA]

[-] EMBL CA762594             [ATCATTGGAGAACCTCATATTTTTCGCTAGGAACTATCCTGGTTCCTTTCAGGCGCTTCTGAACAAAGTACAAGGGCAGAGAGCAGACTGGGAGTACCCTTTGCGGGTTGCTGGGATCAACATTTCATTTATGCTGATCCAAATGCTGGATCTACAGTCAAGTGTTCCATCTTCAAAGTCAGGAGTTCGTTTTGTTGAACTGCTTGGACGAGATGAGAATGCATTTGATCACCTTTACTGCGTAGCCTTTCGGCTTCTTGATGCTCAGTGGCTTGTGAAACGTGCTTCTTACATGGAGTTCAATGAGGTATTGAAATCTACAAGAACTCAGTTGGAGCGTGAACTAGTACTAGAGGATGTATTGGAGGTGAAGGACCTGCCGTTTTACACAATGCTGGACAAATAATCCAAATAAGTAAGGGACTGTATGTGGCATTCAAGTGAAAAAAGTTATCCGGATCTGCAACTGATTTATGTTGGCGGGGCCTTTTGTTGTCTGACCATTTGAGTGCATATTTATCTTTTCCTTGTTCAAGAAAAATATTCAGGCCTGTGTACATAGTGTTCATTTTCTGTAACTTATGACTCGCCATTTCAAGGCAATAATAAGCATCAAGTTGATCCCACTATGTAGTATGTACTCCTGTTAAAAAAAAAAAAAAAAA]


>consensus_14380#1 ATCATTGGAGAACCTCATATTTTTCGCTAGGAACTATCCTGGTTCCTTTCAGGCGCTTCT GAACAAAGTACAAGGGCAGAGAGCAGACTGGGAGTACCCTTTGCGGGTTGCTGGGATCAA CATTTCATTTATGCTGATCCAAATGCTGGATCTACAGTCAAGTGTTCCATCTTCAAAGTC AGGAGTTCGTTTTGTTGAACTGCTTGGACGAGATGAGAATGCATTTGATCACCTTTACTG CGTAGCCTTTCGGCTTCTTGATGCTCAGTGGCTTGTGAAACGTGCTTCTTACATGGAGTT CAATGAGGTATTGAAATCTACAAGAACTCAGTTGGAGCGTGAACTAGTACTAGAGGATGT ATTGGAGGTGAAGGACCTGCCGTTTTACACAATGCTGGACAAATAATCCAAATAAGTAAG GGACTGTATGTGGCATTCAAGTGAAAAAAGTTATCCGGATCTGCAACTGATTTATGTTGG CGGGGCCTTTTGTTGTCTGACCATTTGAGTGCATATTTATCTTTTCCTTGTTCAAGAAAA ATATTCAGGCCTGTGTACATAGTGTTCATTTTCTGTAACTTATGACTCGCCATTTCAAGG CAATAATAAGCATCAAGTTGATCCCACTATGTAGTATGTACTCCTGTTAAAAAAAAAAAA AAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14380#0      TNCTTCTCTCCCGTTCCCGTAGCCTCTCTCCATCTCTCGCTCTCTTTCTCCTCGGTTTAA 60
consensus_14380#1      ------------------------------------------------------------
                                                                                   

consensus_14380#0      AGCTTCCTCGAGTCGCCTCCTCCGAATCCCCACAGCCCAGGCCAAAGGCAGCCTGAGCCA 120
consensus_14380#1      ------------------------------------------------------------
                                                                                   

consensus_14380#0      GGGTGGGGAGCTTCCTCTCCTCGTCTTCCTCCTCATCCTCCTGATCCCGGAAGGACCCCA 180
consensus_14380#1      ------------------------------------------------------------
                                                                                   

consensus_14380#0      GGATTACAAGTACTTCATGTCAATGACCAATCTAAGGAGGCGACTCCATCATGGAGATGT 240
consensus_14380#1      ------------------------------------------------------------
                                                                                   

consensus_14380#0      CGATGGAAGGAAGAATGAGCATGTTGACATATCCAGCGTAGATTCCCTTAATGAACCTTT 300
consensus_14380#1      ------------------------------------------------------------
                                                                                   

consensus_14380#0      ACTAGGGAAATCTAGCTCTGATACTGGTGGATCAGAGGTATATGATCCCAGAAGGCAAGA 360
consensus_14380#1      ------------------------------------------------------------
                                                                                   

consensus_14380#0      CTTATGGGATGATGATAGAAAGAAGGAACAGCTACACTGGTCATTTCTTTTCTCAAATTT 420
consensus_14380#1      ------------------------------------------------------------
                                                                                   

consensus_14380#0      GATTGCGCAATGGGCACAATGGTTAGCAAATATTATTGTTGGCTCTGGATCACTATTTGG 480
consensus_14380#1      ------------------------------------------------------------
                                                                                   

consensus_14380#0      TAGATTGTTTCCCTTTTCGTTGGACAACCAGAACAGCAGTCCAGTGTATCTTAGTCCTTT 540
consensus_14380#1      ------------------------------------------------------------
                                                                                   

consensus_14380#0      GCAGGAAGATAGACTGAATACTTTAAGGTCTAGATTGCAAATCCCTTTCGATGGCTCCCG 600
consensus_14380#1      ------------------------------------------------------------
                                                                                   

consensus_14380#0      TGTTGAACACCAAGATGCTTTGAGACAACTTTGGAGGTTAGCATACCCCAACCGTGACAT 660
consensus_14380#1      ------------------------------------------------------------
                                                                                   

consensus_14380#0      TCCTCCACTGAAATCAGAACTATGGAAGGAGATGGGTTGGCAAGGCACTGATCCATCAAC 720
consensus_14380#1      ------------------------------------------------------------
                                                                                   

consensus_14380#0      TGACTTCAGGGGTGGAGGATTCATATCATTGGAGAACCTCATATTTTTCGCTAGGAACTA 780
consensus_14380#1      ------------------------ATCATTGGAGAACCTCATATTTTTCGCTAGGAACTA 36
                                               ************************************

consensus_14380#0      TCCTGGTTCCTTTCAGGCGCTTCTGAACAAAGTACAAGGGCAGAGAGCAGACTGGGAGTA 840
consensus_14380#1      TCCTGGTTCCTTTCAGGCGCTTCTGAACAAAGTACAAGGGCAGAGAGCAGACTGGGAGTA 96
                       ************************************************************

consensus_14380#0      CCCTTTTGCGGTTGCTGGGATCAACATTTCATTTATGCTGATCCAAATGCTGGATCTACA 900
consensus_14380#1      CCCTTTGCGGGTTGCTGGGATCAACATTTCATTTATGCTGATCCAAATGCTGGATCTACA 156
                       ******   ***************************************************

consensus_14380#0      GTCAAGTGTTCCATCTTCAAAGTCAGGAGTTCGTTTTGTTGAACTGCTTGGACGAGATGA 960
consensus_14380#1      GTCAAGTGTTCCATCTTCAAAGTCAGGAGTTCGTTTTGTTGAACTGCTTGGACGAGATGA 216
                       ************************************************************

consensus_14380#0      GAATGCATTTGATCACCTCTACTGCATAGCCTTTCGGCTTCTCGATGCTCAGTGGCTTGT 1020
consensus_14380#1      GAATGCATTTGATCACCTTTACTGCGTAGCCTTTCGGCTTCTTGATGCTCAGTGGCTTGT 276
                       ****************** ****** **************** *****************

consensus_14380#0      GAAACGTGCTTCTTACATGGAGTTCAATGAGGTATTGAAATCTACAAGAACTCAGTTGGA 1080
consensus_14380#1      GAAACGTGCTTCTTACATGGAGTTCAATGAGGTATTGAAATCTACAAGAACTCAGTTGGA 336
                       ************************************************************

consensus_14380#0      GCGTGAACTAGTACTAGAGGATGTATTGGAGGTGAAGGACCTGCCGTCTTACACAATGCT 1140
consensus_14380#1      GCGTGAACTAGTACTAGAGGATGTATTGGAGGTGAAGGACCTGCCGTTTTACACAATGCT 396
                       *********************************************** ************

consensus_14380#0      GGACAAATAATCCAAATAAGTAAGGGACTGTATGTGGCATTCAAGTGAAAAAAGTTATCC 1200
consensus_14380#1      GGACAAATAATCCAAATAAGTAAGGGACTGTATGTGGCATTCAAGTGAAAAAAGTTATCC 456
                       ************************************************************

consensus_14380#0      GGATCTGCAACTGATTTATGTTGGCGGGGCCTTTTGTTGTCTGACCATCTGAGTGCATAT 1260
consensus_14380#1      GGATCTGCAACTGATTTATGTTGGCGGGGCCTTTTGTTGTCTGACCATTTGAGTGCATAT 516
                       ************************************************ ***********

consensus_14380#0      TTATCTTTTCCTTGTTCAAGAGAAAAATTCAGGCCTGTGTACATAGTGTTCATTTTCTGT 1320
consensus_14380#1      TTATCTTTTCCTTGTTCAAGAAAAATATTCAGGCCTGTGTACATAGTGTTCATTTTCTGT 576
                       ********************* *** **********************************

consensus_14380#0      AACTTATGACTCGCCATTTCAAGGCAATAATAAGCATCAAGTTGATCACAAACTAAAAAA 1380
consensus_14380#1      AACTTATGACTCGCCATTTCAAGGCAATAATAAGCATCAAGTTGATCCCACTATGTAGTA 636
                       *********************************************** **   *  *  *

consensus_14380#0      AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1418
consensus_14380#1      TGTACTCCTGTTAAAAAAAAAAAAAAAAA--------- 665
                          *        *****************         




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)