|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14387#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1158 fasta sequence
[AAAGATGAACATTACATGCATGCATGGTAACTATATAAACTACTATACCTTCACAGCTAATGTATCTACTACATCTAAAAACAGCTAGCTAATTAACTCACCATCATGGCGTTCGGACGCCGTTCACTCTTCTTGCCGGTGGTGGGCGTCGCGGCCATCCTGCTGCTCGCCGCCGGCCACGCGACCGCCGTCAACACCGGCGAGACCGTCGTGTTCTGGGGCCGGAACAAGGACGAGGGCTCTCTCCGTGAGGCCTGCGACACCGGCCTCTACACCTCCGTCATCATCTCCTTCCTCGCCGTCTTCGGCCACGGCCGCTACTCCCTCGACCTCTCCGGCCACGACGTCTCCGCCGTCGGCGCCGACATCAAGCACTGCCAGTCCAAGTACATCCCCGTGCTCCTCTCCATCGGCGGCCA-GGGCGGCGCCTACTCCCTCCCCACCAACGCCTCCGCCGCCGACGTCGCCGACCACCTCTGGGACTCCTTCCTCGGCGGCGGCCGAGCCGGCGTGCCCCGCCCCTTCGGCGACGCGGTGGTGGACGGCGTCGACCTCTTCATCGACCAGGGCGGCGCCGAGCACTACGACGAGCTTG-CCCGGCGGCTGTTCAGCCACTACAAGTTCGAGATGCTGCTGACGGCGACGACGAGGTGCTCGTACCCGGACCACCGCCTCGACATGGCGCTGGCGACGGGGCTGTTCACGCACATCCACGTCCGGGT-GTTCGGCGGC-GGCGGCGACGCCGGCTGCACGACGCGCCACAGGGCGTCGTGGGAGAGGTGGGCGGCGGCGTACCCCGGCAGCCTGGTGTACCTCGGCGTGGTGGCCTCGCCGGAGCAGGACGCCAACGCCTACCTGCCGCGTAAGGTTCTCTTCTCCGACGTGCTCAGCCACATCGTCGAGAAGCCCAACTATGGTGGATTGATGATCTGGGATAGGTACTACGACAAGAAGACCGGCTACTCCGCTGGAAAAGTTTTTTAATTAACTTCCAATAGACTGGAAATTAGTTAACCATGGTGACCAATACTAATGAATAAGGATTTGTAGAAAACAAGGATGTGGTTTTGTCAATGATGTGCTTCTATGCTCATAAATAAATACACGGACTTAATAAGAGGATCAGAAAAAAAGATTTTAATCTCNTGAGAGAAAAAA]
[+] EMBL C26430 [AAAGATGAACATTACATGCATGCATGGTAACTATATAAACTACTATACCTTCACAGCTAATGTATCTACTACATCTAAAAACAGCTAGCTAATTAACTCACCATCATGGCGTTCGGACGCCGTTCACTCTNCTTGCCGGTGGTGGGCGTCGCGGCCATCCTGCTGCTCGCCGCCGGCCACGCGACCGCCGTCAACACCGGCGAGACCGTCGTGTTCTGGGGCCGGAACAAGGACGAGGGCTCTCTCCGTGAGGCCTGCGACACCGGCCTCTACACCTCCGTNATCATCTCCTTCCTCGCCGTCTTCGGCCACGGCCGCTACTCCCTCGACCTCTCCGGCCACGACGTCTTCGCCGTCGG GCCGACATCAAG ACTGCCAGTNCAAGTACAT CCCGTGCT CTTTCCATCGGCGGCCA GGGCGG G CTAATTCCT TCCA CAAAGCTTC ]
[+] EMBL AK073800 [ TAACTATATAAACTACTATACCTTCACAGCTAATGTATCTACTACATCTAAAAACAGCTAGCTAATTAACTCACCATCATGGCGTTCGGACGCCGTTCACTCTTCTTGCCGGTGGTGGGCGTCGCGGCCATCCTGCTGCTCGCCGCCGGCCACGCGACCGCCGTCAACACCGGCGAGACCGTCGTGTTCTGGGGCCGGAACAAGGACGAGGGCTCTCTCCGTGAGGCCTGCGACACCGGCCTCTACACCTCCGTCATCATCTCCTTCCTCGCCGTCTTCGGCCACGGCCGCTACTCCCTCGACCTCTCCGGCCACGACGTCTCCGCCGTCGGCGCCGACATCAAGCACTGCCAGTCCAAGTACATCCCCGTGCTCCTCTCCATCGGCGGCCA GGGCGGCGCCTACTCCCTCCCCACCAACGCCTCCGCCGCCGACGTCGCCGACCACCTCTGGGACTCCTTCCTCGGCGGCGGCCGAGCCGGCGTGCCCCGCCCCTTCGGCGACGCGGTGGTGGACGGCGTCGACCTCTTCATCGACCAGGGCGGCGCCGAGCACTACGACGAGCTTG CCCGGCGGCTGTTCAGCCACTACAAGTTCGAGATGCTGCTGACGGCGACGACGAGGTGCTCGTACCCGGACCACCGCCTCGACATGGCGCTGGCGACGGGGCTGTTCACGCACATCCACGTCCGGGT GTTCGGCGGC GGCGGCGACGCCGGCTGCACGACGCGCCACAGGGCGTCGTGGGAGAGGTGGGCGGCGGCGTACCCCGGCAGCCTGGTGTACCTCGGCGTGGTGGCCTCGCCGGAGCAGGACGCCAACGCCTACCTGCCGCGTAAGGTTCTCTTCTCCGACGTGCTCAGCCACATCGTCGAGAAGCCCAACTATGGTGGATTGATGATCTGGGATAGGTACTACGACAAGAAGACCGGCTACTCCGCTGGAAAAGTTTTTTAATTAACTTCCAATAGACTGGAAATTAGTTAACCATGGTGACCAATACTAATGAATAAGGATTTGTAGAAAACAAGGATGTGGTTTTGTCAATGATGTGCTTCTATGCTCATAAATAAATACACGGACTTAA ]
[+] EMBL D55708 [ TAGCTAATTAACTCACCATCATGGCGTTCGGACGCCGTTCACTCTTCTTGCCGGTGGTGGGCGTCGCGGCCATCCTGCTGCTCGCCGCCGGCCACGCGACCGCCGTCAACACCGGCGAGACCGTCGTGTTCTGGGGCCGGAACAAGGACGAGGGCTCTCTCCGTGAGGCCTGCGACACCGGCCTCTACACCTCCGTCATCATCTCCTTCCTCGCCGTCTTCGGCCACGGCCGCTACTCCCTCGACCTCTCCGGCCACGACGTCTCCGCCGTCGGCGCCGACATCAAGCACTGCCAGTCCAAGTACATCCCCGTGCTCCTCTCCATCGGCGGCCA GGGCGGCGCCTACTCCCTCCCCACCAACGCCTCCGCCGCCGACGTCGCCGACCACCTCTGGGACTCCTTCCTCGGCGGCGGCCGAGCCGGCGTGCCCCGCCCCTTCGGCGACGCGGTGGTGGACGGCGTCGACCTCTTCATCGACCAGGGCGGCGCCGAGCACTACGACGAGCTTG CCCGGCGGCTGTTCAGCCACTACAAGTTCGAGATGCTGCTGACGGCGACGACGAGGTGCTCGTACCCGGACCACCGCCTCGACATGGCGCTGGCGACGGGGCTGTTCACGCACATCCACGTCCGGGT GTTCGGCGGC GGCGGCGACGCCGGCTGCACGACGCGCCACAGGGCGTCGTGGGAGAGGTGGGCGGCGGCGTACCCCGGCAGCCTGGTGTACCTCGGCGTGGTGGCCTCGCCGGAGCAGGACGCCAACGCCTACCTGCCGCGTAAGGTTCTCTTCTCCGACGTGCTCAGCCACATCGTCGAGAAGCCCAACTATGGTGGATTGATGATCTGGGATAGGTACTACGACAAGAAGACCGGCTACTCCGCTGGAAAAGTTTTTTAATTAACTTCCAATAGACTGGAAATTAGTTAACCATGGTGACCAATACTAATGAATAAGGATTTGTAGAAAACAAGGATGTGGTTTTGTCAATGATGTGCTTCTATGCTCATAAATAAATACACGGACTTAAa ]
[+] EMBL OS0481A [ TAGCTAATTAACTCACCATCATGGCGTTCGGACGCCGTTCACTCTTCTTGCCGGTGGTGGGCGTNGCGGCCATCCTGCTGCTCGCCGCCGGCCACGCGACCGCCGTCAACACCGGCGAGACCGTCGTGTTCTGGGGCCGGAACAAGGACGAGGGCTCTCTCCGTGAGGCCTGCGACACCGGCCTCTACACCTCCGTCATCATCTNCTTCCTCGCCGTCTTCGGCCACGGCCGCTACTCCCTCGACCTCTNCGGCCACGANGTCTGCGCNGTCGGGCCCGACATCAAGCACTGCCAGTCCAAGTACATCCCCGTGCTCCTttaaganta ]
[+] EMBL AU067944 [ AATTAACTCACCATCATGGCGTTCGGACGCCGTTCACTCTTCTTGCCGGTGGTGGGCGTCGCGGCCATCCTGCTGCTCGCCGCCGGCCACGCGACCGCCGTCAACACCGGCGAGACCGTCGTGTTCTGGGGCCGGAACAAGGACGAGGGCTCTCTCCGTGAGGCCTGCGACACCGGCCTCTACACCTCCGTCATCATCTCCTTCCTCGCCGTCTTCGGCCACGGCCGCTACTCCCTCGACCTCTCCGGCCACGACGTCTCCGCCGTCGGCGCCGACATCAAGCACTGCCAGTCCAAGTACATCCCCGTGCTCCTCTCCATCGGCGGCCAGGGGCGGCGCCTACTCCCTCCCCACCAACGNCTCCGGCGC ]
[+] EMBL AU092306 [ AGCCGGCCTGCCCCGCCCCTTCGGCGACGCGTTGGTGGACGGCGTCGACCTCTTCATCGACCAGGNCGGCGCCGAGCACTACGACGAGCTTGCCCCGGCGGCTGTTCAGCCACTACAAGTTCGAGATGCTGCTGACGGCGACGACGAGGTGNTCGTACCCGGACCACCGCCTCGACATGGCGNTGGCGACGGGGCTGTTNACGCACATCCACGTCCGGGT GTTCGGCGGC GGCGGCGACGCCGGCTGCACGACGCGCCACAGGGCGTCGTGGGAGAGGTGGGCGGCGGCGTACCCCGGCAGCCTGGTGTACCTCGGCGTGGTGGCCTCGCCGGAGCAGGACGCCAACGCCTACCTGCCGCGTAAGGTTCTCTTCTCCGACGTGCTCAGCCACATCGTCGAGAAGCCCAACTATGGTGGATTGATGATCTGGGATAGGTACTACGACAAGAAGACCGGCTACTCCGCTGGAAAAGTTTTTTAATTAACTTCCAATAGACTGGAAATTAGTTAACCATGGTGACCAATACTAATGAATAAGGATTTGTAGAAAACAAGGATGTGGTTTTGTCAATGATGTGCTTCTATGCTCATAAATAAATACACGGACaaaaaa ]
[+] EMBL AU067945 [ nGGGTGGTTCGGCGGCGGGCGGCGACGCCGGCTGCANGACGCGCCACAGGGCGTCGTGGGAGAGGTGGGCGGCGGCGTACCCCGGCAGCNTGGTGTACCNCGGCGTGGTGGCCTCGCCGGAGCAGGACGCCAACGCCTACCTGCCGCGTAAGGTTCTCNTCTCCGACGTGCTCAGCCANATCGTCGAGAAGCCCAACTATGGTGGATTGATGATCTGGGATAGGTACTACGACAAGAAGACCGGCTACTCCGCTGGAAAAGTTTTTTAATTAANTTCCAATAGACTGGAAATTAGTTAACCATGGTGACCAATACTAATGAATAAGGATTTGTAGAAAACAAGGATGTGGTTTTGTCAATGATGNGCTTCTATGCTCATAAATAAATACACGGACTTAATAAGAGGATCAGAAGAATGGATTTTAATCTCNTGAGAGAAAAAA]
[+] EMBL C98055 [ cnCCGGCTGCACGACGCGCCACAGGGCGTCGTGGGAGANGTGGGCGGCGGCGTACCCCGGCAGCCTGGTGTACCTCGGCGTGGTGGCCTCGCCGGAGCAGGACGCCAACGCCTACCTGCCGCGTAAGGTTCTCTTCTCCGACGTGCTCAGCCACATCGTCGAGAANCCCAACTATGGTGGATTGATGATCTGGGATAGGTACTACGACAAGAAGACCGGCTACTCCGCTGGAAAAGTTTTTTAATTAACTTCCAATAGACTGGAAATTAGTTAACCATGGTGACCAATACTAATGAATAAGGATTTGTAGAAAACAAGGATGTGGTTTTGTCAATGATGTGCTTCTATGCTCATAAATAAATACACGGACTTAATAAGAGGATCAAAAAAAAAaaaaaaa ]
[+] EMBL CF332221 [ gagtagaaaTGT ATTGATGTGCTTCTATGCTCATAAATAAATACACGGACTTAATAAGAGGATCAGAAAAAAA ]
consensusID : consensus_14387#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1158 fasta sequence
[CAAAACCATCAACCTAGCACACAGCAACTTGCTTTACATTGCTGCAAACATGGGCCTCGTGCACGCACTCCTCCCCTTCGCAGCAGCAGCAGCATTGCTGCTCCTCGCCGCGCCGCCGCCGGCGACGGCCGACGACCCGGGCCTCGCCGTCTACTGGGGCCGCCACAAGGAGGAGGGCTCACTGAGAGAGGCCTGCGACACCGGCCGCTACACCACCGTCATCATCACCTTCTACAACGCCTTCGGCCACGGCCGCTACTCCCTCGACATCTCCGGCCACCCGCTCGCCGCCGTCGGCGCCGACATCAAGCACTGCCAGTCCAGGGGCATCACCGTGCTCCTCTCAATCGGCGGCCAGGGCGGCGCCTACTCCCTCCCCACCAACGCCTCCGCCGCCGACGTCGCCGACAACCTCTGGAACGCCTACCTCGGCGGCCACCGCGCCGGGGTGGCGCGCCCCTTCGGCGACGACGCGGCGGTGGACGGCATCGACTTCTTCATCGACCAGGGCGGCGCCGACCACTACGACGACCTCGCCCGGCGGCTCGACGGCTACAACAAGTACTACCGGGGCAGGGTCGGCGTGCTCTTGACGGCGACGACGAGGTGCTCGTACCCGGACCACCGGCTGGAG-AAGGCGCTGGCGACGGGGGTGTTCGCGCGCATCCATGTGAGGATGTTCGGTGACGAGCAGTGCACCATGTCGCCGAGGTACTCGTGGGAGAAGTGGGCGGCGGCGTTCCCCGGCAGCAAGGTGTACATCGGGCTGGTGGCGTCGCCGGAGCAGGACAGCGCGTGGATGTTTCAGAAGGATCTCTACTACGAGATGCTGCAGTTCGTCAGGTCGCTGCCCAACTATGGTGGCTTGGCCATCTATGACAGGTACTTCGACAAGAAGGCCAACTACACTGGTGAGGGTTAATTAGCTAGTGATCATCGTCTTTGCTGTCTGAAGTGAAGACTAGATTTTTACCATTATGTAAAAGATCTGAATAAAGACACCTCTTTTTTCTGTAACATTGTGATTTTGATGTACTTCAATAATGGACGAATAAAATGAGGTCTCAAAAGCTATGTTGGCATCCCTCCAAAAAAAAAAAGGAAAGAAGGTTATGCATGGATCAGATCTCAAATAATGCTTAATAAATTAATCATCAC]
[+] EMBL AB027427 [CAAAACCATCAACCTAGCACACAGCAACTTGCTTTACATTGCTGCAAACATGGGCCTCGTGCACGCACTCCTCCCCTTCGCAGCAGCAGCAGCATTGCTGCTCCTCGCCGCGCCGCCGCCGGCGACGGCCGACGACCCGGGCCTCGCCGTCTACTGGGGCCGCCACAAGGAGGAGGGCTCACTGAGAGAGGCCTGCGACACCGGCCGCTACACCACCGTCATCATCACCTTCTACAACGCCTTCGGCCACGGCCGCTACTCCCTCGACATCTCCGGCCACCCGCTCGCCGCCGTCGGCGCCGACATCAAGCACTGCCAGTCCAGGGGCATCACCGTGCTCCTCTCAATCGGCGGCCAGGGCGGCGCCTACTCCCTCCCCACCAACGCCTCCGCCGCCGACGTCGCCGACAACCTCTGGAACGCCTACCTCGGCGGCCACCGCGCCGGGGTGGCGCGCCCCTTCGGCGACGACGCGGCGGTG ]
[+] EMBL OSS2321A [CAAAACCATCAACCTAGCACACAGCAACTTGCTTTACATTGCTGCAAACATGGGCCTCGTGCACGCACTCCTCCCCTTCGCAGCAGCAGCAGCATTGCTNTNCCTCGCCGCGCCGCCGCCGGGAACGG CGACGACCCGGGCCTCGCCGTCTACTGGGGCCGCCACAAGGAGGAGGGCTCACTGAGAGAGGCCTGCGACACCGGCCGCTACACCACCGTCATCATCACCTTCTACA ]
[+] EMBL AK064356 [ CTTGCTTTACATTGCTGCAAACATGGGCCTCGTGCACGCACTCCTCCCCTTCGCAGCAGCAGCAGCATTGCTGCTCCTCGCCGCGCCGCCGCCGGCGACGGCCGACGACCCGGGCCTCGCCGTCTACTGGGGCCGCCACAAGGAGGAGGGCTCACTGAGAGAGGCCTGCGACACCGGCCGCTACACCACCGTCATCATCACCTTCTACAACGCCTTCGGCCACGGCCGCTACTCCCTCGACATCTCCGGCCACCCGCTCGCCGCCGTCGGCGCCGACATCAAGCACTGCCAGTCCAGGGGCATCACCGTGCTCCTCTCAATCGGCGGCCAGGGCGGCGCCTACTCCCTCCCCACCAACGCCTCCGCCGCCGACGTCGCCGACAACCTCTGGAACGCCTACCTCGGCGGCCACCGCGCCGGGGTGGCGCGCCCCTTCGGCGACGACGCGGCGGTGGACGGCATCGACTTCTTCATCGACCAGGGCGGCGCCGACCACTACGACGACCTCGCCCGGCGGCTCGACGGCTACAACAAGTACTACCGGGGCAGGGTCGGCGTGCTCTTGACGGCGACGACGAGGTGCTCGTACCCGGACCACCGGCTGGAG AAGGCGCTGGCGACGGGGGTGTTCGCGCGCATCCATGTGAGGATGTTCGGTGACGAGCAGTGCACCATGTCGCCGAGGTACTCGTGGGAGAAGTGGGCGGCGGCGTTCCCCGGCAGCAAGGTGTACATCGGGCTGGTGGCGTCGCCGGAGCAGGACAGCGCGTGGATGTTTCAGAAGGATCTCTACTACGAGATGCTGCAGTTCGTCAGGTCGCTGCCCAACTATGGTGGCTTGGCCATCTATGACAGGTACTTCGACAAGAAGGCCAACTACACTGGTGAGGGTTAATTAGCTAGTGATCATCGTCTTTGCTGTCTGAAGTGAAGACTAGATTTTTACCATTATGTAAAAGATCTGAATAAAGACACCTCTTTTTTCTGTAACATTGTGATTTTGATGTACTTCAATAATGGACGAATAAAATGAGGTCTCAAAAGCTATGTTGGCATCCCTCCAAAAAAAAAAAGGAAAGAAGGTTATGCATGGATCAGATCTCAAATAATGCTTAATAAATTAATCATCAC]
[+] EMBL AK102731 [ CCTTCGCAGCAGCAGCAGCATTGCTGCTCCTCGCCGCGCCGCCGCCGGCGACGGCCGACGACCCGGGCCTCGCCGTCTACTGGGGCCGCCACAAGGAGGAGGGCTCACTGAGAGAGGCCTGCGACACCGGCCGCTACACCACCGTCATCATCACCTTCTACAACGCCTTCGGCCACGGCCGCTACTCCCTCGACATCTCCGGCCACCCGCTCGCCGCCGTCGGCGCCGACATCAAGCACTGCCAGTCCAGGGGCATCACCGTGCTCCTCTCAATCGGCGGCCAGGGCGGCGCCTACTCCCTCCCCACCAACGCCTCCGCCGCCGACGTCGCCGACAACCTCTGGAACGCCTACCTCGGCGGCCACCGCGCCGGGGTGGCGCGCCCCTTCGGCGACGACGCGGCGGTGGACGGCATCGACTTCTTCATCGACCAGGGCGGCGCCGACCACTACGACGACCTCGCCCGGCGGCTCGACGGCTACAACAAGTACTACCGGGGCAGGGTCGGCGTGCTCTTGACGGCGACGACGAGGTGCTCGTACCCGGACCACCGGCTGGAG AAGGCGCTGGCGACGGGGGTGTTCGCGCGCATCCATGTGAGGATGTTCGGTGACGAGCAGTGCACCATGTCGCCGAGGTACTCGTGGGAGAAGTGGGCGGCGGCGTTCCCCGGCAGCAAGGTGTACATCGGGCTGGTGGCGTCGCCGGAGCAGGACAGCGCGTGGATGTTTCAGAAGGATCTCTACTACGAGATGCTGCAGTTCGTCAGGTCGCTGCCCAACTATGGTGGCTTGGCCATCTATGACAGGTACTTCGACAAGAAGGCCAACTACACTGGTGAGGGTTAATTAGCTAGTGGTCATCGTCTTTGCTGTCTGAAGTGAAGACTAGATTTTTACCATTATGTAAAAGATCTGAATAAAGACACCTCTTTTTTCTGTAACATTGTGATTTTGATGTACTTCAATAATGGACGAATAAAATGAGGT ]
[-] EMBL D43060 [ GTACCCGGACCACCGGCTGAAGAAAGCCGCT GCGACGGGGGTGTTCGCGCGCATCCATGTGAGGATGTTCGGTGACGAGCAGTGCACCATGTCGCCGAGGTACTCGTGGGAGAAGTGGNCGGCGGCGTTCCCCGGCAGCAAGGTGTACATCGGGCTGGTGGCGTCGCCGGAGCAGGACAGCGCGTGGATGTTTCAGAAGGATCTCTACTACGAGATGCTGCAGTTCGTCAGGTCGCTGCCCAACTATGGTGGCTTGGCCATCTATGACAGGTACTTCGACAAGAAGGCCAACTACACTGGTGAGGGTTAATTAGCTAGTGATCATCGTCTTTGCTGTCTGAAGTGAAGACTAGATTTT ]
consensusID : consensus_14387#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 345 fasta sequence
[GGTGACGAGCAGTGCACCATGTCGCCGAGGTACTCGTGGGAGAAGTGGGCGGCGGCGTTCCCCGGCAGCAAGGTGTACATCGGGCTGGTGGCGTCGCCGGAGCAGGACAGCGCGTGGATGTTTCAGAAGGATCTCTACTACGAGATGCTGTTTTTCGTCAGGTCGCTGCCCAACTATGGTGGCTTGGCCAT-TANGTCATGTACTTCGACAAGAAGGCCAACTACACTGGTGAGGGTTAATTAGCTAGTGATCATCGTCTTTGCTGTCTGAAGTGAAGACTAGATTTTTACCATTATGTAAAAGATCTGAATAAAGACACCTCTTTTTTCTGAAAAAAAAAAAAAA]
[+] EMBL CF330706 [GGTGACGAGCAGTGCACCATGTCGCCGAGGTACTCGTGGGAGAAGTGGGCGGCGGCGTTCCCCGGCAGCAAGGTGTACATCGGGCTGGTGGCGTCGCCGGAGCAGGACAGCGCGTGGATGTTTCAGAAGGATCTCTACTACGAGATGCTGTTTTTCGTCAGGTCGCTGCCCAACTATGGTGGCTTGGCCAT TANGTCATGTACTTCGACAAGAAGGCCAACTACACTGGTGAGGGTTAATTAGCTAGTGATCATCGTCTTTGCTGTCTGAAGTGAAGACTAGATTTTTACCATTATGTAAAAGATCTGAATAAAGACACCTCTTTTTTCTGAAAAAAAAAAAAA ]
[-] EMBL CF330705 [ GTGACGAGCAGTGCACCATGTCGCCGAGGTACTCGTGGGAGAAGTGGGCGGCGGCGTTCCCCGGCAGCAAGGTGTACATCGGGCTGGTGGCGTCGCCGGAGCAGGACAGCGCGTGGATGTTTCAGAAGGATCTTTACTACGAGATGCTGCAGTTTGTCAGGTCGCTGCCCAACTATGGTGGCTTGGCCATCTATGACAGGTACTTCGACAAGAAGGCCAACTACACTGGTGAGGGTTAATTAGCTAGTGATCATCGTCTTTGCTGTTTGAAGTGAAGACTAGATTTTTACCATTATGTAAAAGATTTGAATAAAGACACCTCTTTTTTTTGAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14387#1 ------------------------------------------------------------
consensus_14387#2 ------------------------------------------------------------
consensus_14387#0 AAAGATGAACATTACATGCATGCATGGTAACTATATAAACTACTATACCTTCACAGCTAA 60
consensus_14387#1 --CAAAACCATCAACCTAGCACACAGCAACTTGCTTTACATTGCTGCAAACATGGGCCTC 58
consensus_14387#2 ------------------------------------------------------------
consensus_14387#0 TGTATCTACTACATCTAAAAACAGCTAGCTAATTAACTCACCATCATGGCGTTCGGACGC 120
consensus_14387#1 GTGCACGCACTCCTCCCCTTCGCAGCAGCAGCAGCATTGCTGCTCCTCGCCGCGCCGCCG 118
consensus_14387#2 ------------------------------------------------------------
consensus_14387#0 CGTTCACTCTTCTTGCCGGTGGTGGGCGTCGCGGCCATCCTGCTGCTCGCCGCCGGCCAC 180
consensus_14387#1 CCGGCGACGGCCGACGACCCGGGCCTCGCCGTCTACTGGGGCCGCCACAAGGAGGAGGGC 178
consensus_14387#2 ------------------------------------------------------------
consensus_14387#0 GCGACCGCCGTCAACACCGGCGAGACCGTCGTGTTCTGGGGCCGGAACAAGGACGAGGGC 240
consensus_14387#1 TCACTGAGAGAGGCCTGCGACACCGGCCGCTACACCACCGTCATCATCACCTTCTACAAC 238
consensus_14387#2 ------------------------------------------------------------
consensus_14387#0 TCTCTCCGTGAGGCCTGCGACACCGGCCTCTACACCTCCGTCATCATCTCCTTCCTCGCC 300
consensus_14387#1 GCCTTCGGCCACGGCCGCTACTCCCTCGACATCTCCGGCCACCCGCTCGCCGCCGTCGGC 298
consensus_14387#2 ------------------------------------------------------------
consensus_14387#0 GTCTTCGGCCACGGCCGCTACTCCCTCGACCTCTCCGGCCACGACGTCTCCGCCGTCGGC 360
consensus_14387#1 GCCGACATCAAGCACTGCCAGTCCAGGGGCATCACCGTGCTCCTCTCAATCGGCGGCCAG 358
consensus_14387#2 ------------------------------------------------------------
consensus_14387#0 GCCGACATCAAGCACTGCCAGTCCAAGTACATCCCCGTGCTCCTCTCCATCGGCGGCCAG 420
consensus_14387#1 GGCGGCGCCTACTCCCTCCCCACCAACGCCTCCGCCGCCGACGTCGCCGACAACCTCTGG 418
consensus_14387#2 ------------------------------------------------------------
consensus_14387#0 GGCGGCGCCTACTCCCTCCCCACCAACGCCTCCGCCGCCGACGTCGCCGACCACCTCTGG 480
consensus_14387#1 AACGCCTACCTCGGCGGCCACCGCGCCGGGGTGGCGCGCCCCTTCGGCGACGACGCGGCG 478
consensus_14387#2 ------------------------------------------------------------
consensus_14387#0 GACTCCTTCCTCGGCGGCGGCCGAGCCGGCGTGCCCCGCCCCTTCGGCGACG---CGGTG 537
consensus_14387#1 GTGGACGGCATCGACTTCTTCATCGACCAGGGCGGCGCCGACCACTACGACGACCTCGCC 538
consensus_14387#2 ------------------------------------------------------------
consensus_14387#0 GTGGACGGCGTCGACCTCTTCATCGACCAGGGCGGCGCCGAGCACTACGACGAGCTTGCC 597
consensus_14387#1 CGGCGGCTCGACGGCTACAACAAGTACTACCGGGGCAGGGTCGGCGTGCTCTTGACGGCG 598
consensus_14387#2 ------------------------------------------------------------
consensus_14387#0 CGGCGGCTGTTCAGCCACTACAAGT---------------TCGAGATGCTGCTGACGGCG 642
consensus_14387#1 ACGACGAGGTGCTCGTACCCGGACCACCGGCTGGAGAAGGCGCTGGCGACGGGGGTGTTC 658
consensus_14387#2 ------------------------------------------------------------
consensus_14387#0 ACGACGAGGTGCTCGTACCCGGACCACCGCCTCGACATGGCGCTGGCGACGGGGCTGTTC 702
consensus_14387#1 GCGCGCATCCATGTGAGGATGTTCGGTGACGA--GCAG-------TGCACCATGTCGCCG 709
consensus_14387#2 ------------------------GGTGACGA--GCAG-------TGCACCATGTCGCCG 27
consensus_14387#0 ACGCACATCCACGTCCGGGTGTTCGGCGGCGGCGGCGACGCCGGCTGCACGACGCGCCAC 762
** * ** ** ***** * * *
consensus_14387#1 AGGTACTCGTGGGAGAAGTGGGCGGCGGCGTTCCCCGGCAGCAAGGTGTACATCGGGCTG 769
consensus_14387#2 AGGTACTCGTGGGAGAAGTGGGCGGCGGCGTTCCCCGGCAGCAAGGTGTACATCGGGCTG 87
consensus_14387#0 AGGGCGTCGTGGGAGAGGTGGGCGGCGGCGTACCCCGGCAGCCTGGTGTACCTCGGCGTG 822
*** ********** ************** ********** ******* **** **
consensus_14387#1 GTGGCGTCGCCGGAGCAGGAC---AGCGCGTGGATGTTTCAGAAGGATCTCTACTACGAG 826
consensus_14387#2 GTGGCGTCGCCGGAGCAGGAC---AGCGCGTGGATGTTTCAGAAGGATCTCTACTACGAG 144
consensus_14387#0 GTGGCCTCGCCGGAGCAGGACGCCAACGCCTACCTGCCGCGTAAGGTTCTCTTCTCCGAC 882
***** *************** * *** * ** * **** ***** ** ***
consensus_14387#1 ATGCTGCAGTTCGTCAGGTCGCTGCCCAACTATGGTGGCTTGGCCATCTATGACAGGTAC 886
consensus_14387#2 ATGCTGTTTTTCGTCAGGTCGCTGCCCAACTATGGTGGCTTGGCCAT-TANGTCATGTAC 203
consensus_14387#0 GTGCTCAGCCACATCGTCGAGAAGCCCAACTATGGTGGATTGATGATCTGGGATAGGTAC 942
**** * ** * *************** *** ** * * * ****
consensus_14387#1 TTCGACAAGAAGGCCAACTACACTGGTG--AGGGTTAATTAGCTAGTGATCATCGTCTTT 944
consensus_14387#2 TTCGACAAGAAGGCCAACTACACTGGTG--AGGGTTAATTAGCTAGTGATCATCGTCTTT 261
consensus_14387#0 TACGACAAGAAGACCGGCTACTCCGCTGGAAAAGTTTTTTAATTAACTTCCAATAGACTG 1002
* ********** ** **** * * ** * *** *** ** ** *
consensus_14387#1 GCTGTCTGAAGTGAAGACTAGATTTTTACCATTATGTAAAAGATCTGAATAAAGACACCT 1004
consensus_14387#2 GCTGTCTGAAGTGAAGACTAGATTTTTACCATTATGTAAAAGATCTGAATAAAGACACCT 321
consensus_14387#0 GAAATTAGTTAACCATGGT-GACCAATACTAATGAATAAGGATTTGTAGAAAACAAGGAT 1061
* * * * * ** *** * * *** * * *** * *
consensus_14387#1 CTTTTTTCTGTAACATTGTGATTTTGATGTACTTCAATAATGGACGAATAAAATGAGGTC 1064
consensus_14387#2 CTTTTTTCTGAAAAAAAAAAAAAA------------------------------------ 345
consensus_14387#0 GTGGTTTTGTCAATGATGTGCTTCTATGCTCATAAATAAATACACGGACTTAATAAGAGG 1121
* *** **
consensus_14387#1 TCAAAAGCTATGTTGGCATCCCTCCAAAAAAAAAAAGGAAAGAAGGTTATGCATGGATCA 1124
consensus_14387#2 ------------------------------------------------------------
consensus_14387#0 ATCAGAAAAAAAGATTTTAATCTCNTGAGAGAAAAAA----------------------- 1158
consensus_14387#1 GATCTCAAATAATGCTTAATAAATTAATCATCAC 1158
consensus_14387#2 ----------------------------------
consensus_14387#0 ----------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||