These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14451#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 2155 fasta sequence [GTACCTGCCCCCGCACCCCCCGACGCAATCGTCCACCCCGCGTCGTCTCCGGCCGCCGCCCACCGCCGCCGGAGCCCCGCCGCCCCCAGCCCGCCATGGCGGATCCGCCG-TCCGCGGCCGCCACCGCCTCGCCGCAGCCCGATCAGCTCGCCGCCGCCGCCGTCTCCACCCCGCAAAACCCCAACCCTAACCCCCTCCTCTCCCCCCAAA-TCCCACCGTCGCCCACCGTCTCCGACCTGTCCGCCATCTCGTCCCCGCAGCTCGACCCGTCCGCGGCGGGCGGCGGGGCCATGGACTACCCCCCGCGGCCGCCGCAGATGCAGGCTCCTTCGCCCGGTCAGGCGGCGGCCGGGGCTGGAGGCTTCGGCCAGATCCACCGCTCGGGCTCGGGCTCCCGCCTCGCCGCTGTCGGCCAGCTTCCACAGTACGCTGCTGCTGCGGCCAGGATGTACGGCAGTCAGGTGAACTTCTCG-GGAG-GTGGAGGACAGGTGG-GACAA------CAGCAGCAGCAGCA------GCTGGCTGCTCGCGCGGCCATGCTTAGTCAAGGCCAGATTGGGATGCTGC-AAGG-GCAG-GGGAACGCAGCATCTGCGGCGCACTATGGTCTCCAGT-CACAGATGATGGCGCAGCCAA--GGCAGAAGGGTATGGTGCAAGGTGCACAATTTAATACCGCCAATGCAGCTCAAGCATTACAAGGTATGCAGTCCATGGGAGTCATGGGTGGTATGAGAGGAAATGGAACTATTCCATATAATCAGCAACGTTTTGCCCATGCACAAGCACAATTGAGGCCGCAGCAGACATCACAGCAAGGCACAC-TGTCTCCACAG---GTTGTGGGTCAAGGCTTGA-CAAGAA-CAGCATCGA-TTGCTGCATTAAAT-CCACAGC-TACCTGGATCGTC-GACAAAT-GGGCCGA-TGGCAC-AAATGTCCCTTCCTCAGAAACAGCAGCAGGCAGCATGGTTAAAACAAATGCAATCATCGCTGGGATCACCTGTTTCTCCACAACAATTTCAGCATCAACAAAGGATGCTATTAATACATCAACTTCAACAGCAGTCAGGATTGAATCAACACCAAATCGCACAAACCCAACAACAGCATCCTCATCTCAATACCCAGCTTTTACAGCAGCAACACATTCTACAGCAACTTCAGCAACAACAACAATCTCCAAGGATATCAGCATCTGGTTCCCAGAAGTCCATGAACCTGACAGGATCACAACCGGGCACTCCTTTATCAGGTGGAACTATGACTGGTGGAAGTGCAAGTCAAGGAGCAGAAGTAACTAATCAACTTCTTGGGAAGAGAAAAATACAAGATTTGGTTTCACAGGTAGATCCCCTGGGCAAGGTTGATCCAGAAGTGGAAGATTTGCTTTTGGAGATTGCTGATGACTTCATTGATTCGGTGACTGCATTTGCGTGTACCCTTGCGAAGCATAGGAAATCATCAGTCCTGGAAGCCAAGGATGTATTGCTGCACCTAGAAAAAAATTGGCACTTATCTGTTCCTGGTTTCTTAAGGGAGGACAAGAATCCGCAAAGACATCCTGTAAAGGTATCAGTGGACCCTCAACAACCAGAATGTGATGCTGCTGGTATTAGAAGCACAGGAAATAAATTGGTAATTAACAATTCAGTTGCCAACCATCAAACAAGACCTCCGGTTACTGAGCCTTCACCAATGCCCACAATG-GGGC-CTCTGTCAAAA-GTGCCCCG-TTTCTAAGCATCATGCCTCCTCATCAGTGCAAGGGAAAAGGGAAATTACAT-----GTTCTAGGACATTTCACATACAGCTTGGTATTAATTAGTATCTAACTTGAGGATTGCTAGCAAATGGAAGCACAATAAATGTATGAGCATCTACGGGCAAAAGTGGGATGCTTGTGTTCTTTAAAGGAAAGAAGTTGCTGACTGACAGATTGTTCGCGACAGCCTCATCCAGGAGCTCTTGTGTAACCTTATTAGAAGTATTCGTTGATCGCTGTAGCTGACCCCTCTCGTTGTACATAAATGTTTTTTTGCGAACGGGGCAGCCC-TTTTCGTTCTTGTTGTTCCTATATAGATGTAGAACCCATATTATGGTATCGTGTATTTGCTACAACTCATAAGTTGATCTAAAAGATCAG--AAAAAAATGTCATTATATCGTGTCAAAAAAAAAAAAA] [+] EMBL AK101755 [GTACCTGCCCCCGCACCCCCCGACGCAATCGTCCACCCCGCGTCGTCTCCGGCCGCCGCCCACCGCCGCCGGAGCCCCGCCGCCCCCAGCCCGCCATGGCGGATCCGCCG TCCGCGGCCGCCACCGCCTCGCCGCAGCCCGATCAGCTCGCCGCCGCCGCCGTCTCCACCCCGCAAAACCCCAACCCTAACCCCCTCCTCTCCCCCCAAA TCCCACCGTCGCCCACCGTCTCCGACCTGTCCGCCATCTCGTCCCCGCAGCTCGACCCGTCCGCGGCGGGCGGCGGGGCCATGGACTACCCCCCGCGGCCGCCGCAGATGCAGGCTCCTTCGCCCGGCCAGGCGGCGGCCGGGGCTGGAGGCTTCGGCCAGATCCACCGCTCGGGCTCGGGCTCCCGCCTCGCCGCTGTCGGCCAGCTTCCACAGTACGCTGCTGCTGCGGCCAGGATGTACGGCAGTCAGGTGAACTTCTCG GGAG GTGGAGGACAGGTGG GACAA CAGCAGCAGCAGCAGCAGCTGCTGGCTGCTCGCGCGGCCATGCTTAGTCAAGGCCAGATTGGGATGCTGC AAGG GCAG GGGAACGCAGCATCTGCGGCGCACTATGGTCTCCAGT CACAGATGATGGCGCAGCCAA GGCAGAAGGGTATGGTGCAAGGTGCACAATTTAATACTGCCAATGCAGCTCAAGCATTACAAGGTATGCAGTCCATGGGAGTCATGGGTGGTATGAGAGGAAATGGAACTATTCCATATAATCAGCAACGTTTTGCCCATGCACAAGCACAATTGAGGCCGCAGCAGACATCACAGCAAGGCACAC TGTCTCCACAG GTTGTGGGTCAAGGCTTGA CAAGAA CAGCATCGA TTGCTGCATTAAAT CCACAGC TACCTGGATCGTC GACAAAT GGGCCGA TGGCAC AAATGTCCCTTCCTCAGAAACAGCAGCAGGCAGCATGGTTAAAACAAATGCAATCATCGCTGGGATCACCTGTTTCTCCACAACAATTTCAGCATCAACAAAGGATGCTATTAATACATCAACTTCAACAGCAGTCAGGATTGAATCAACACCAAATCGCACAAACCCAACAACAGCATCCTCATCTCAATACCCAGCTTTTACAGCAGCAACACATTCTACAGCAACTTCAGCAACAACAACAATCTCCAAGGATATCAGCATCTGGTTCCCAGAAGTCCATGAACCTGACAGGATCACAACCGGGCACTCCTTTATCAGGTGGAACTATGACTGGTGGAAGTGCAAGTCAAGGAGCAGAAGTAACTAATCAACTTCTTGGGAAGAGAAAAATACAAGATTTGGTTTCACAGGTAGATCCCCTGGGCAAGGTTGATCCAGAAGTGGAAGATTTGCTTTTGGAGATTGCTGATGACTTCATTGATTCGGTGACTGCATTTGCGTGTACCCTTGCGAAGCATAGGAAATCATCAGTCCTGGAAGCCAAGGATGTATTGCTGCACCTAGAAAAAAATTGGCACTTATCTGTTCCTGGTTTCTTAAGGGAGGACAAGAATCCGCAAAGACATCCTGTAAAGGTATCAGTGGACCCTCAACAACCAGAATGTGATGCTGCTGGTATTAGAAGCACAGGAAATAAATTGGTAATTAACAATTCAGTTGCCAACCATCAAACAAGACCTCCGGTTACTGAGCCTTCACCAATGCCCACAATG GGGC CTCTGTCAAAA GTGCCCCG TTTCTAAGCATCATGCCTCCTCATCAGTGCAAGGGAAAAGGGAAATTACATTACAGGTTCTAGGACATTTCACATACAGCTTGGTATTAATTAGTATCTAACTTGAGGATTGCTAGCAAATGGAAGCACAATAAATGTATGAGCATCTACGGGCAAAAGTGGGATGCTTGTGTTCTTTAAAGGAAAGAAGTTGCTGACTGACAGATTGTTCGCGACAGCCTCATCCAGGAGCTCTTGTGTAACCTTATTAGAAGTATTCGTTGATCGCTGTAGCTGACCCCTCTCGTTGTACATAAATGTTTTTTTGCGAACGGGGCAGCCC TTTTCGTTCTTGTTGTTCCTATATAGATGTAGAACCCATATTATGGTATCGTGTATTTGCTACAACTCATAAGTTGATCTAAAAGATCAG AAAAAAATGTCATTATATCGTGTCAttg ] [+] EMBL CB638286 [ CGCCCCCA CCCGCCATGGCGGATCCGCCG TCCGCGGCCGCCACCGCCTCGCCGCAGCCCGATCAGCTCGCCGCCGCCGCCGTCTCCACCCCGCAAAACCCCAACCCTAACCCCCTCCTCTCCCCCCAAATTTTTATCGTCGCCCACCGTCTTCGACCTGTCCGCCATCTCGTCCCCGCAGCTCGACCCGTCCGCGGCGGGCGGCGGGGCCATGGACTACCCCCCGCGGCCGTCGCAGATGCAGGCTCCTTCGCCCGGCCAGGCGGCGGCCGGGGCTGGAGGCTGCGGCCAGATCCACCGCTC ] [+] EMBL CB629367 [ GGCGGATCCGCCGCTCCGCGGCCGCCACCGCCTCGCCGCAGCCCGATCAGCTCGCCGCCGCCGCCGTCTCCACCCCGCAAAACCCCAACCCTAACCCCCTCCTCTCCCCCCAAA TCCCACCGTCGCCCACCGTCTCCGACCTGTCCGCCATCTCGTCCCCGCAGCTCGACCCGTCCGCGGCGGGCGGCGGGGCCATGGACTACCCCCCGCGGCCGCCGCAGATGCAGGCTCCTTCGCCCGGTCAGGCGGCGGCCGGGGCTGGAGGCTTCGGCCAGATCCACCGCTCGGGCTCGGGCTCCCGCCTCGCCGCTGTCGGCCAGCTTCCACAGTACGCTGCTGCTGCGGCCAGGATGTACGGCAGTCAGGTGAACTTCTCG GGAG GTGGAGGACAGGTGG GACAA CAGCAGCAGCAGCA GCTGGCTGCTCGCGCGGCCATGCTTAGTCAAGGCCAGATTGGGATGCTGC AAGG GCAG GGGAACGCAGCATCTGCGGCGCACTATGGTCTCCAGT CACAGATGATGGCGCAGCCAA GGCAGAAGGGTATGGTGCAAGGTGCACAATTTAATACCGCCAATGCAGCTCAAGCATTACAAGGTATGCAGTCCATGGGAGTCATGGGTGGTATGAGAGGAAATGGAACTATTCCATATAATCAGCAACGTTTTGCCCATGCACAAGCACAATTGAGGCCGCAGCAGACATCACAGCAAGGCACAC TGTCTCCACAG GTTGTGGGTCAAGGCTTGA CAAGAA CAGCATCGA TTGCTGCATT AAT CC ] [+] EMBL BM422281 [ GCAGGCT CTTCGCCCGGTCAGGCGGCGG CGGGGCTGGAGGCTTCGGCCAGATCCACCG TCGGGCTCGGGCTCCCG CTCGCCG TGTCGGCCAGCTTCCACAGTACGCTGCTGCTGCGGCCAGGATGTACGGCAGTCAGGTGAACTTCTCG GGAG GTGGAGGACAGGTGG GACAA CAGCAGCAGCAGCA GCTGGCTGCTCGCGCGGCCATGCTTAGTCAAGGCCAGATTGGGATGCTGC AAGG GCAG GGGAACGCAGCATCTGCGGCGCACTATGGTCTCCAGT CACAGATGATGGCGCAGCCAA GGCAGAAGGGTATGGTGCAAGGTGCACAATTTAATACCGCCAATGCAGCTCAAGCATTACAAGGTATGCAGTCCATGGGAGTCATGGGTGGTATGAGAGGAAATGGAACTATTCCATATAATCAGCAACGTTTTGCCCATGCACAAGCACAATTGAGGCCGCAGCAGACATCACAGCAAGGCACAC TGTCTCCACAG GTTGTGGGTCAAGGCTTGA CAAGAA CAGCATCGA TTGCTGCATTAAAT CCACAGC TACCTGGATCGTC GACA ] [-] EMBL BI807450 [ CAGGCTCCTTCGCCCGGTCAGGCGGCGG CGGGGCTGGAGGCTTCGGCCAGATCCACCGCTCGGGCTCGGGCTCCCGCCTCGCCGCTGTCGG CAGCTTCCACAGTACGCTGCTGCTGCGG CAGGATGTACGGCAGTCAGGTGAACTTCTCGTGGAGTGTGGAGGACAGGTGGTGACAA CAGCAGCAGCAGCA GCTGGCTGCTCGCGCGGCCATGCTTAGTCAAGGCCAGATTGGGATGCTGCAAAGGTGCAGTGTGAACGCAGCATCTGCGGCGCACTATGGTCTCCAGTCCACAGATGATGGCGCAGCCAAAGGGCAGAAGGGTATGGTGCAAGGTGCACAATTTAATACCG CAATGCAGCTCAAGCATTACCAGGTATGCAGTCCATGGGAGTCATGGG ] [-] EMBL BI810269 [ GCTCCTTCGCCCGGTCAGGCGGCGGCCGGGGCTGGAGGCTTCGGCCAGATCCACCGCTCGGGCTCGGGCTCCCGCCTCGCCGCTGTCGGCCAGCTTCCACAGTACGCTGCTGCTGCGGCCAGGATGTACGGCAGTCAGGTGAACTTCTCG GGAG GTGGAGGACAGGTGG GACAA CAGCAGCAGCAGCA GCTGGCTGCTCGCGCGGCCATGCTTAGTCAAGGCCAGATTGGGATGCTGC AAGG GCA GGGAACGCAGCATCTGCGGCGCACTATGGTCTCCAGT CACAGATGATGGCGCAGCCAA GGCAGAAGGGTATGGTGCAAGGTGCACAATTTAATACCGCCAATGCAGCTCAAGCATTACAAGGTATGCAGTCCATGGGAGTCATGGGTGGTATGAGAGGAAATGGAACTATTCCATATAATCAGCAACGTTTTGCCCATGCACAAGCACAATTGAGGCCGCAGCAGACATCACAGCAAGGCACACGTGTCTCCACAG GTTGTGGGTCAAGGTTGGACCAAGAACCAG ATCGATTTGCTGCATTAAATCCCACAGCTTACCTGGATCGTCGGACAAATGGGGCCGATTGGGACAAAATGTTCCTTTCTCAGA ] [+] EMBL CB637638 [ GCGGCCGGGGCTGGAGGCTTCGGCCAGATCCACCGCTCGGGCTCGGGCTCCCGCCTCGCCGCTGTCGGCCAGCTTCCACAGTACGCTGCTGCTGCGGCCAGGATGTACGGCAGTCAGGTGAACTTCTCG GGAG GTGGAGGACAGGTGG GACAACAGCAGCAGCAGCAGCAGCA GCTGGCTGCTCGCGCGGCCATGCTTAGTCAAGGCCAGATTGGGATGCTGC AAGG GCAG GGGAACGCAGCATCTGCGGCGCACTATGGTCTCCAGT CACAGATGATGGCGCAGCCAA GGCAGAAGGGTATGGTGCAAGGTGCACAATTTAATACTGCCAATGCAGCTCAAGCATTACAAGGTATGCAGTCCATGGGAGTCATGGGTGGTATGAGAGGAAATGGAACTATTCCATATAATCAGCAACGTTTTGCCCATGCACAAGCACAATTGAGGCCGCAGCAGACATCACAGCAAGGCACAC TGTCTCCACAGAAAGTTGTGGGTCAAGGCTTGA CAAGAA CAGCATCGA TT ] [-] EMBL CB629368 [ TGGAGATTGCTGATGACTTCATTGATTCGGTGACTGCATTTGCGTGTACCCTTGCGAAGCATAGGAAATCATCAGTCCTGGAAGCCAAGGATGTATTGCTGCACCTAGAAAAAAATTGGCACTTATCTGTTCCTGGTTTCTTAAGGGAGGACAAGAATCCGCAAAGACATCCTGTAAAGGTATCAGTGGACCCTCAACAACCAGAATGTGATGCTGCTGGTATTAGAAGCACAGGAAATAAATTGGTAATTAACAATTCAGTTGCCAACCATCAAACAAGACCTCCGGTTGCTGAGCCTTCACCAATGCCCACAATG GGGC CTCTGTCAAAA GTGCCCCG TTTCTAAGCATCATGCCTCCTCATCAGTGCAAGGGAAAAGGGAAATTACATTACAGGTTCTAGGACATTTCACATACAGCTTGGTATTAATTAGTATCTAACTTGAGGATTGCTAGCAAATGGAAGCACAATAAATGTATGAGCATCTACGGGCAAAAGTGGGATGCTTGTGTTCTTTAAAGGAAAGAAGTTGCTGACTGACAGATTGTTCGCGACAGCCTCATCCAGGAGCTCTTGTGTAACCTTATTAGAAGTATTCGTTGATCGCTGTAGCTGACCCCTCTCGTTGTACATAAATGTTTTTTTGCGAACGGGGCAGCCC TTTTCGTTCTTGTTGTTCCTATATAGATGTAGAACCCATATTATGGTATCGTGTATTTGCTACAACTCATAAGTTGATCTAAAAGATCAGA AAAAAAATGTCATTATATCGTGT ] [-] EMBL CA763639 [ CTGCACCTAGAAAAAAATTGGCACTTATCTGTTCCTGGTTTCTTAAGGGAGGACAAGAATCCGCAAAGACATCCTGTAAAGGTATCAGTGGACCCTCAACAACCAGAATGTGATGCTGCTGGTATTAGAAGCACAGGAAATAAATTGGTAATTAACAATTCAGTTGCCAACCATCAAACAAGACCTCCGGTTGCTGAGCCTTCACCAATGCCCACAATG GGGC CTCTGTCAAAA GTGCCCCG TTTCTAAGCATCATGCCTCCTCATCAGAGCAAGGGAAAAGGGAAATTACAT GTTCTAGGACATTTCACATACAGCTTGGTATTAATTAGTATCTAACTTGAGGATTGCTAGCAAATGGAAGCACAATAAATGTATGAGCATCTACGGGCAAAAGTGGGATGCTTGTGTTCTTTAAAGGAAAGAAGTTGCTGACTGACAGATTGTCCGCGACAGCCTCATCCAGGAGCTCTTGTGTAACCTTATTAGAAGTATTCGTTGATCGCTGTAGCTGACCCCTCTCGTTGTACATAAATGTTTTTTTGCGAACGGGGCAGCCC TTTTCGTTCTTGTTGTTCCTATATAGATGTAGAACCCATATTATGGTATCGTGTATTTGCTACAACTCATAAGTTGATCTAAAAGATCAGAAAAAAAAATGTCATTATATCGTGTCAAAAAAAAAA ] [-] EMBL CA763640 [ GCACCTAGAAAAAAATTGGCGCTTATCTGTTCCTGGTTTCTTAAGGGAGGACAAGAATCCGCAAAGACATCCTGTAAAGGTATCAGTGGACCCTCAACAACCAGAATGTGATGCTGCTGGTATTAGAAGCACAGGAAATAAATTGGTAATTAACAATTCAGTTGCCAACCATCAAACAAGACCTCCGGTTGCTGAGCCTTCACCAATGCCCACAATG GGGC CTCTGTCAAAA GTGCCCCG TTTCTAAGCATCATGCCTCCTCATCAGTGCAAGGGAAAAGGGAAATTACATTACAGGTTCTAGGACATTTCACATACAGCTTGGTATTAATTAGTATCTAACTTGAGGATTGCTAGCAAATGGAAGCACAATAAATGTATGAGCATCTACGGGCAAAAGTGGGATGCTTGTGTTCTTTAAAGGAAAGAAGTTGCTGACTGACAGATTGTTCGCGACAGCCTCATCCAGGAGCTCTTGTGTAACCTTATTAGAAGTATTCGTTGATCGCTGTAGCTGACCCCTCTCGTTGTACATAAATGTTTTTTTGCGAACGGGGCAGCCCTTTTTCGTTCTTGTTGTTCCTATATAGATGTAGAACCCATATTATGGTATCGTGTATTTGCTACAACTCATAAGTTGATCTAAAAGATCAGA AAAAAAATGTCATTATATCGTAAAAAAAAAAAAAAAA] [-] EMBL CB638287 [ GCAAAGACATCCTGTAAAGGTATCAGTGGACCCTCAACAACCAGAATGTGATGCTGCTGGTATTAGAAGCACAGGAAATAAATTGGTAATTAACAATTCAGTTGCCAACCATCAAACAAGACCTCCGGTTACTGAGCCTTCACCAATGCCCACAATG GGGC CTCTGTCAAAA GTGCCCCG TTTTTAAGCATCATGCCTCCTCATCAGTGCAAGGGAAAAGGGAAATTACAT GTTTTAGGACATTTCACATACAGCTTGGTATTAATTAGTATCTAACTTGAGGATTGCTAGCAAATGGAAGCACAATAAATGTATGAGCATCTACGGGCAAAAGTGGGATGCTTGTGTTCTTTAAAGGAAAGAAGTTGCTGACTGACAGATTGTTCGCGACAGCCTCATCCAGGAGCTCTTGTGTAACCTTATTAGAAGTATTCGTTGATCGCTGTAGCTGACCCCTCTCGTTGTACATAAATGTTTTTTTGCGAACGGGGCAGCCC TTTTCGTTCTTGTTGTTCCTATATAGATGTAGAACCCATATTATGGTATCGTGTATTTGCTACAACTCATAAGTTGATCTA ] [-] EMBL CB637639 [ GTGGACCCTCAACAACCAGAATGTGATGCTGCTGGTATTAGAAGCACAGGAAATAAATTGGTAATTAACAATTCAGTTGCCAACCATCAAACAAGACCTCCGGTTATTGAGCTTTCACCAATGCCCACAATG GGGC TTTTGTCAAAA GTGCCCCG TTTTTAAGCATCATGCCTCTTCATCAGTGCAAGGGAAAAGGGAAATTACAT GTTTTAGGACATTTCACATACAGCTTGGTATTAATTAGTATCTAACTTGAGGATTGCTAGCAAATGGAAGCCCAATAAATGTATGAGCATCTACGGGCAAAAGTGGGATGCTTGTGTTTTTTAAAGGAAAGAAGTTGTTGACTGACAGATTGTTCGCGACAGCTTCATCCAGGAGTTTTTGTGTACCCTTATTAAAAGTATTCGTTGATCGCTGTAGTTGACCCCTCTCGTTGTACATAAATGTTTTTTTGCGAACGGGGCAGCCC TTTTCGTTCTTGTTGTTCCTAAATAGATGTAGAACCCATATTATGGTATGGTGTATTTGCTACAACTCATAAGTTGATTTAAAAGATCAG AAAAAAATGTCATTA ] [+] EMBL CB684592 [ CTGACCCTTCACCAATGCCCACAATGTGGGCTCTCTGTCAAAATGTGCCCCGCTTTCTAAACATCATGCCTCCTCATCAGTGCAAGGGAAAAGGGAAATTACAT GTTCTAGGACATTTCACATACAGCTTGGTATTAATTAGTATCTAACTTGAGGATTGCTAGCAAATGGAAGCACAATAAATGTATGAGCATCTACGGGCAAAAGTGGGATGCTTGTGTTCTTTAAAGGAAAGAAGTTGCTGACTGACAGATTGTTCGCGACAGCCTCATCCAGGAGCTCTTGTGTAACCTTATTAGAAGTATTCGTTGATCGCTGTAGCTGACCCCTCTCGTTGTACATAAATGTTTTTTTGCGAACGGGGCAGCCC TTTTCGTTCTTGTTGTTCCTATATAGATGTAGAACCCATATTATGGTATCGTGTATTTGCTACAACTCATAAGTTGATCT ] [-] EMBL D43603 [ GACAGATTGTTCGCGACAGCCTCATCCAGGAGCTCTTGTGTAACCNTATTAGAAGTATTCGTTGATCGCTGTAGCTGACCCCTCNCGTTGTACATAAATGTTTTTTTGCGAACGGGGCAGCCC TTTTCGTTCTTGTTGNTCCTATATAGATGTAGAACCCATATTATGGTATCGTGTATTTGCTACAACTCATAAGTTGATCTAAAAGATCAG NAAAAAATGTNATTA ] consensusID : consensus_14451#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 451 fasta sequence [GCCCCGTTTCTAAGCATCATGCCTCCTCATCAGTGCAAGGGAAAAGGGAAATTACATTACAGGTTCTAGGACATTTCACATACAGCTTGGTATTAATTAGTATCTAACTTGAGGATTGCTAGCAAATGGAAGCACAATAAATGTATGAGCATCTACGGGCAAAAGTGGGATGCTTGTGTTCTTTAAAGGAAAGAAGTTGCTGACTGACAGATTGTTCGCGACAGCCTCATCCAGGAGCTCTTGTGTAACCTTATTAGAAGTATTCGTTGATCGCTGTAGCTGACCCCTCTCGTTGTACATAAATGTTTTTTTGCGAACGGGGCAGCCCTTTTCGTTCTTGTTGTTCCTATATAGATGTAGAACCCATATTATGGTATCGTGTATTTGCTACAACTCATAAGTTGATCTAAAAGATCAGAANANAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL BE040123 [GCCCCGTTTCTAAGCATCATGCCTCCTCATCAGTGCAAGGGAAAAGGGAAATTACATTACAGGTTCTAGGACATTTCACATACAGCTTGGTATTAATTAGTATCTAACTTGAGGATTGCTAGCAAATGGAAGCACAATAAATGTATGAGCATCTACGGGCAAAAGTGGGATGCTTGTGTTCTTTAAAGGAAAGAAGTTGCTGACTGACAGATTGTTCGCGACAGCCTCATCCAGGAGCTCTTGTGTAACCTTATTAGAAGTATTCGTTGATCGCTGTAGCTGACCCCTCTCGTTGTACATAAATGTTTTTTTGCGAACGGGGCAGCCCTTTTCGTTCTTGTTGTTCCTATATAGATGTAGAACCCATATTATGGTATCGTGTATTTGCTACAACTCATAAGTTGATCTAAAAGATCAGAANANAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [-] EMBL CB624828 [ AGGGAAAAGGGAAATTACATTACAGGTTATAGGGCATTTCACATTCAGAGTGGTATTAATTAGTATATAACCTGAGGATTGCTAGCAAATGGAAGCCCAATAAATGTATGAGCATGTACGGGCAAAAGTGGGATGATTGTGTTCTTTAAAGGAAAGAAGTGGCTGAGTGACAGATTGTTCGCGACAGCCTCATCCAGGAGCTCTTGTGTAACCTTATCAGAAGTATTGGTTGATCGCTGTAGCTGACCCCTATCGTTGTACATAAAGGTTTTTTTGGGATCGGGG ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14451#0 GTACCTGCCCCCGCACCCCCCGACGCAATCGTCCACCCCGCGTCGTCTCCGGCCGCCGCC 60 consensus_14451#1 ------------------------------------------------------------ consensus_14451#0 CACCGCCGCCGGAGCCCCGCCGCCCCCAGCCCGCCATGGCGGATCCGCCGTCCGCGGCCG 120 consensus_14451#1 ------------------------------------------------------------ consensus_14451#0 CCACCGCCTCGCCGCAGCCCGATCAGCTCGCCGCCGCCGCCGTCTCCACCCCGCAAAACC 180 consensus_14451#1 ------------------------------------------------------------ consensus_14451#0 CCAACCCTAACCCCCTCCTCTCCCCCCAAATCCCACCGTCGCCCACCGTCTCCGACCTGT 240 consensus_14451#1 ------------------------------------------------------------ consensus_14451#0 CCGCCATCTCGTCCCCGCAGCTCGACCCGTCCGCGGCGGGCGGCGGGGCCATGGACTACC 300 consensus_14451#1 ------------------------------------------------------------ consensus_14451#0 CCCCGCGGCCGCCGCAGATGCAGGCTCCTTCGCCCGGTCAGGCGGCGGCCGGGGCTGGAG 360 consensus_14451#1 ------------------------------------------------------------ consensus_14451#0 GCTTCGGCCAGATCCACCGCTCGGGCTCGGGCTCCCGCCTCGCCGCTGTCGGCCAGCTTC 420 consensus_14451#1 ------------------------------------------------------------ consensus_14451#0 CACAGTACGCTGCTGCTGCGGCCAGGATGTACGGCAGTCAGGTGAACTTCTCGGGAGGTG 480 consensus_14451#1 ------------------------------------------------------------ consensus_14451#0 GAGGACAGGTGGGACAACAGCAGCAGCAGCAGCTGGCTGCTCGCGCGGCCATGCTTAGTC 540 consensus_14451#1 ------------------------------------------------------------ consensus_14451#0 AAGGCCAGATTGGGATGCTGCAAGGGCAGGGGAACGCAGCATCTGCGGCGCACTATGGTC 600 consensus_14451#1 ------------------------------------------------------------ consensus_14451#0 TCCAGTCACAGATGATGGCGCAGCCAAGGCAGAAGGGTATGGTGCAAGGTGCACAATTTA 660 consensus_14451#1 ------------------------------------------------------------ consensus_14451#0 ATACCGCCAATGCAGCTCAAGCATTACAAGGTATGCAGTCCATGGGAGTCATGGGTGGTA 720 consensus_14451#1 ------------------------------------------------------------ consensus_14451#0 TGAGAGGAAATGGAACTATTCCATATAATCAGCAACGTTTTGCCCATGCACAAGCACAAT 780 consensus_14451#1 ------------------------------------------------------------ consensus_14451#0 TGAGGCCGCAGCAGACATCACAGCAAGGCACACTGTCTCCACAGGTTGTGGGTCAAGGCT 840 consensus_14451#1 ------------------------------------------------------------ consensus_14451#0 TGACAAGAACAGCATCGATTGCTGCATTAAATCCACAGCTACCTGGATCGTCGACAAATG 900 consensus_14451#1 ------------------------------------------------------------ consensus_14451#0 GGCCGATGGCACAAATGTCCCTTCCTCAGAAACAGCAGCAGGCAGCATGGTTAAAACAAA 960 consensus_14451#1 ------------------------------------------------------------ consensus_14451#0 TGCAATCATCGCTGGGATCACCTGTTTCTCCACAACAATTTCAGCATCAACAAAGGATGC 1020 consensus_14451#1 ------------------------------------------------------------ consensus_14451#0 TATTAATACATCAACTTCAACAGCAGTCAGGATTGAATCAACACCAAATCGCACAAACCC 1080 consensus_14451#1 ------------------------------------------------------------ consensus_14451#0 AACAACAGCATCCTCATCTCAATACCCAGCTTTTACAGCAGCAACACATTCTACAGCAAC 1140 consensus_14451#1 ------------------------------------------------------------ consensus_14451#0 TTCAGCAACAACAACAATCTCCAAGGATATCAGCATCTGGTTCCCAGAAGTCCATGAACC 1200 consensus_14451#1 ------------------------------------------------------------ consensus_14451#0 TGACAGGATCACAACCGGGCACTCCTTTATCAGGTGGAACTATGACTGGTGGAAGTGCAA 1260 consensus_14451#1 ------------------------------------------------------------ consensus_14451#0 GTCAAGGAGCAGAAGTAACTAATCAACTTCTTGGGAAGAGAAAAATACAAGATTTGGTTT 1320 consensus_14451#1 ------------------------------------------------------------ consensus_14451#0 CACAGGTAGATCCCCTGGGCAAGGTTGATCCAGAAGTGGAAGATTTGCTTTTGGAGATTG 1380 consensus_14451#1 ------------------------------------------------------------ consensus_14451#0 CTGATGACTTCATTGATTCGGTGACTGCATTTGCGTGTACCCTTGCGAAGCATAGGAAAT 1440 consensus_14451#1 ------------------------------------------------------------ consensus_14451#0 CATCAGTCCTGGAAGCCAAGGATGTATTGCTGCACCTAGAAAAAAATTGGCACTTATCTG 1500 consensus_14451#1 ------------------------------------------------------------ consensus_14451#0 TTCCTGGTTTCTTAAGGGAGGACAAGAATCCGCAAAGACATCCTGTAAAGGTATCAGTGG 1560 consensus_14451#1 ------------------------------------------------------------ consensus_14451#0 ACCCTCAACAACCAGAATGTGATGCTGCTGGTATTAGAAGCACAGGAAATAAATTGGTAA 1620 consensus_14451#1 ------------------------------------------------------------ consensus_14451#0 TTAACAATTCAGTTGCCAACCATCAAACAAGACCTCCGGTTACTGAGCCTTCACCAATGC 1680 consensus_14451#1 ------------------------------------------------------------ consensus_14451#0 CCACAATGGGGCCTCTGTCAAAAGTGCCCCGTTTCTAAGCATCATGCCTCCTCATCAGTG 1740 consensus_14451#1 -------------------------GCCCCGTTTCTAAGCATCATGCCTCCTCATCAGTG 35 *********************************** consensus_14451#0 CAAGGGAAAAGGGAAATTACAT-----GTTCTAGGACATTTCACATACAGCTTGGTATTA 1795 consensus_14451#1 CAAGGGAAAAGGGAAATTACATTACAGGTTCTAGGACATTTCACATACAGCTTGGTATTA 95 ********************** ********************************* consensus_14451#0 ATTAGTATCTAACTTGAGGATTGCTAGCAAATGGAAGCACAATAAATGTATGAGCATCTA 1855 consensus_14451#1 ATTAGTATCTAACTTGAGGATTGCTAGCAAATGGAAGCACAATAAATGTATGAGCATCTA 155 ************************************************************ consensus_14451#0 CGGGCAAAAGTGGGATGCTTGTGTTCTTTAAAGGAAAGAAGTTGCTGACTGACAGATTGT 1915 consensus_14451#1 CGGGCAAAAGTGGGATGCTTGTGTTCTTTAAAGGAAAGAAGTTGCTGACTGACAGATTGT 215 ************************************************************ consensus_14451#0 TCGCGACAGCCTCATCCAGGAGCTCTTGTGTAACCTTATTAGAAGTATTCGTTGATCGCT 1975 consensus_14451#1 TCGCGACAGCCTCATCCAGGAGCTCTTGTGTAACCTTATTAGAAGTATTCGTTGATCGCT 275 ************************************************************ consensus_14451#0 GTAGCTGACCCCTCTCGTTGTACATAAATGTTTTTTTGCGAACGGGGCAGCCCTTTTCGT 2035 consensus_14451#1 GTAGCTGACCCCTCTCGTTGTACATAAATGTTTTTTTGCGAACGGGGCAGCCCTTTTCGT 335 ************************************************************ consensus_14451#0 TCTTGTTGTTCCTATATAGATGTAGAACCCATATTATGGTATCGTGTATTTGCTACAACT 2095 consensus_14451#1 TCTTGTTGTTCCTATATAGATGTAGAACCCATATTATGGTATCGTGTATTTGCTACAACT 395 ************************************************************ consensus_14451#0 CATAAGTTGATCTAAAAGATCAGAAAAAAATGTCATTATATCGTGTCAAAAAAAAAAAAA 2155 consensus_14451#1 CATAAGTTGATCTAAAAGATCAGAANANAAAAAAAAAAAAAAA----AAAAAAAAAAAAA 451 ************************* * ** * * * ************* |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||