These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14523#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 2016 fasta sequence [AGCCAAAACCAAACTCCATCACCTCCTCCTCCGTCTCCTTCCCCCACCATTTCTCCCCCAAATCCGTCTCCTCCTCCTCCCCCACCCAAATCTCCCACCTCCGCCGTCGCGGAATCCGCCGCGACGACCTCCCCTCGATCCGCCCGATCCGACCCCGGATCGGATCCCACCGTCGCCGCCCGCGCGCGTGGTGGTTGGGTGTGCGGGGTGTGCAAACCCTAGGTCTCCGATCCGGATCCCCCCCCCACCCACCCCGCCGATGGGCGCTGGCCGGGCTTGCCGCGGCGGCCCCTCCTCCTCCTCCCCCGCCGCTGCCGCCGCTGCGGTGGGGCGGCCGTTCCCTCCGATCGCCGCTTCGTGCCCCTTCTCGTCGTCTTCGGCGGCGGCTGCGGCCCCCGCGGCGCCTTCCGAGACGGCGTCGACGTCGGTGACCAAGACCGTGAACGGGTCGCACCACTTCAAGATCGCCGGGTACCCGCTGGCCAAGGGGATCGGGGTCGGGAAATACATCGCCTCCGAGTGCTTCACCGTCGGCGGCTACGACTGGGCGATCTACTTCTACCCCGACGGGAAGAGCCCCGAGGATGGCGCCGCCTACGTCTCGCTCTTCATAGCGCTCGCCAGCGAGGGCACCGACGTCCGCGCGCTCTTCGAGCTCACGCTCGTCGACCAGAGCGGCAAGGGGCAGGACAAGGTGCACACCCACTTTGGGAGGTCGCTCGAGGGCGGGCCATATACCCTCAAGTACCGGGGGAGCATGTGGGGTTACAAGCGTTTCTTCAAACGGTCTGCCTTGGAAACATCAGATTATCTTAAAGATGATTGCCTTTTGGTGAATTGTACTGTTGGTGTTGTCCAATCACATACTGAAGGGCCAAAGATATATACAATACCAGTGCCACCATCCAATATGTCTCAGCATATTGGCCAGCTACTGACGGATGGAAAGAGAACTGATATTACATTTGAAGTTGATGGAGAGGTGTTCCCTGCTCACAAGGTTGTTCTTGCAGCCCGGTCACCAGTTTTCAGGGCACAGCTTTTCGGTCCAATGAAGGATAAAAACATGAAGCGTATAACGATTGAGGATATGGAGGCTTCAGTTTTTAAGGCCTTACTCCATTTTATGTACTGGGATGAGTTGCCTGATATCGAAGAGCTTACTGGCCTAAATACAACTTGGGTATCCACTTTGATGGCTCAGCATTTACTTGCAGCTGCGGATCGTTATGCATTGGAGAGACTAAAGTTGCTCTGTGAGCTCAAGCTTTGTGAAGATGTTGCAATAAACACAGTTGCAAACACTTTGGCACTGGCTGAACAG-CACCACTGTTATCAGCT-AAAAACTGTTT-GCCT-GAGA-TTTGTGG-CTTTG-CCTG-AGAATTTAAAAGCTGTCATGCAAA-CCGATGGGTTTGATTA-TTTGCAGCAAAGCTG-CCCATCCTTGCTGACCGAGCTTCT-GGAGTATGTG-GCCAAGGTAGGGGAGCATTCGGTGAGCCCCTGCTTGTATTCGAACGAAGTCCTT-GATGGTGGCGATGCCAATGGAAGACGTGTGAAACCGCGGATTTAACGGCAGCCCTGATAAAAACCTAGCTGGATTTCCTTGTGTTGTTTCCGTGTAAAGTGTTATAGTTCTATAACGGCACTTTTCTGGTGCCATATTATAT-CATG-CATGTTGTAGTGTCTTGTGACTTCTATACCTCCCCCTATCGTTGCTACTCTGGAGCTGAGTTGTTGCTAATATATGTGTTCTACTGACTAGTGTACTGCAAAATTGCATTGCTGCGAAGCACATGGAGCTTCGCAGCCTGTGACCATAAAGTGCACTCAGGTGGCACGGCAAAGGTGGACTGGGCGCAAGGTTTTGTCGGTGGAAATAACGGCGCAGAATGTTTCTATGGAAGTTTAACTTTGTGCTTAGGTCAGCTTTGTCGATTTGTAGTCGTCTGTATGACTGTAATTCAATTGGAATGGTGAAATGCAATGAAATGTATCGGTTAGATCGAGTCAAACCTTAAAAGG] [+] EMBL AK073258 [AGCCAAAACCAAACTCCATCACCTCCTCCTCCGTCTCCTTCCCCCACCATTTCTCCCCCAAATCCGTCTCCTCCTCCTCCCCCACCCAAATCTCCCACCTCCGCCGTCGCGGAATCCGCCGCGACGACCTCCCCTCGATCCGCCCGATCCGACCCCGGATCGGATCCCACCGTCGCCGCCCGCGCGCGTGGTGGTTGGGTGTGCGGGGTGTGCAAACCCTAGGTCTCCGATCCGGATCCCCCCCCCACCCACCCCGCCGATGGGCGCTGGCCGGGCTTGCCGCGGCGGCCCCTCCTCCTCCTCCCCCGCCGCTGCCGCCGCTGCGGTGGGGCGGCCGTTCCCTCCGATCGCCGCTTCGTGCCCCTTCTCGTCGTCTTCGGCGGCGGCTGCGGCCCCCGCGGCGCCTTCCGAGACGGCGTCGACGTCGGTGACCAAGACCGTGAACGGGTCGCACCACTTCAAGATCGCCGGGTACCCGCTGGCCAAGGGGATCGGGGTCGGGAAATACATCGCCTCCGAGTGCTTCACCGTCGGCGGCTACGACTGGGCGATCTACTTCTACCCCGACGGGAAGAGCCCCGAGGATGGCGCCGCCTACGTCTCGCTCTTCATAGCGCTCGCCAGCGAGGGCACCGACGTCCGCGCGCTCTTCGAGCTCACGCTCGTCGACCAGAGCGGCAAGGGGCAGGACAAGGTGCACACCCACTTTGGGAGGTCGCTCGAGGGCGGGCCATATACCCTCAAGTACCGGGGGAGCATGTGGGGTTACAAGCGTTTCTTCAAACGGTCTGCCTTGGAAACATCAGATTATCTTAAAGATGATTGCCTTTTGGTGAATTGTACTGTTGGTGTTGTCCAATCACATACTGAAGGGCCAAAGATATATACAATACCAGTGCCACCATCCAATATGTCTCAGCATATTGGCCAGCTACTGACGGATGGAAAGAGAACTGATATTACATTTGAAGTTGATGGAGAGGTGTTCCCTGCTCACAAGGTTGTTCTTGCAGCCCGGTCACCAGTTTTCAGGGCACAGCTTTTCGGTCCAATGAAGGATAAAAACATGAAGCGTATAACGATTGAGGATATGGAGGCTTCAGTTTTTAAGGCCTTACTCCATTTTATGTACTGGGATGAGTTGCCTGATATCGAAGAGCTTACTGGCCTAAATACAACTTGGGTATCCACTTTGATGGCTCAGCATTTACTTGCAGCTGCGGATCGTTATGCATTGGAGAGACTAAAGTTGCTCTGTGAGCTCAAGCTTTGTGAAGATGTTGCAATAAACACAGTTGCAAACACTTTGGCACTGGCTGAACAG CACCACTGTTATCAGCT AAAAACTGTTT GCCT GAGA TTTGTGG CTTTG CCTG AGAATTTAAAAGCTGTCATGCAAA CCGATGGGTTTGATTA TTTGCAGCAAAGCTG CCCATCCTTGCTGACCGAGCTTCT GGAGTATGTG GCCAAGGTAGGGGAGCATTCGGTGAGCCCCTGCTTGTATTCGAACGAAGTCCTT GATGGTGGCGATGCCAATGGAAGACGTGTGAAACCGCGGATTTAACGGCAGCCCTGATAAAAACCTAGCTGGATTTCCTTGTGTTGTTTCCGTGTAAAGTGTTATAGTTCTATAACGGCACTTTTCTGGTGCCATATTATAT CATG CATGTTGTAGTGTCTTGTGACTTCTATACCTCCCCCTATCGTTGCTACTCTGGAGCTGAGTTGTTGCTAATATATGTGTTCTAC ] [+] EMBL CB637204 [ ATCACCTCCTCCTCCGTCTCCTTCCCCCACCATTTCTCCCCCAAATCCGTCTCCTCCTCCTCCCCCACCCAAATCTCCCACCTCCGCCGTCGCGGAATCCGCCGCGACGACCTCCCCTCGATCCGCCCGATCCGACCCCGGATCGGATCCCACCGTCGCCGCCCGCGCGCGTGGTGGTTGGGTGTGCGGGGT ] [+] EMBL CB637640 [ CTCCTCCTCCGTCTCCTTCCCCCACCATTTCTCCCCCAAATCCGTCTCCTCCTCCTCCCCCACCCAAATCTCCCACCTCCGCCGTCGCGGAATCCGCCGCGACGACCTCCCCTCGATCCGCCCGATCCGACCCCGGATCGGATCCCACCGTCGCCGCCCGCGCGCGTGGTGGTTGGGTGTGCGGGGTGTGCAAACCCTAcg ] [+] EMBL CB672171 [ TCCCCCACCCAAATCTCCCACCTCCGCCGTCGCGGAATCCGCCGCGACGACCTCCCCTCGATCCGCCCGATCCGACCCCGGATCGGATCCCACCGTCGCCGCCCGCGCGCGTGGTGGTTGGGTGTGCGGGGTGTGCAAACCCTAGGTCTCCGATCCGGATCCCCCCCCCACCCACCCCGCCGATGGGCGCTGGGCGGGCTTGCCGCGGCGGCCCCTCCTCCTCCTCCCCCGCCGCTGCCGCCGCTGCGGTGGGGCGGCCGTTCCCTCCGATCGCCGCTTGGTGCCCCTTCTCGTCGTCTTCAGCGGCGGCTGCGGCCCCCGCGGCGCCTTCCGAGACGGCGTCCACGTCGGTGACCAAGACCGTGAACGGGTCGCACCACTTCGAGATCGCCGGGTGCCCGCTGGCCGAGGGGATCGGGGTCGGGAAATACATCGCCTCCGAGTGCTTCACCGTCGGCGGCTGCGACTGGGCGATCTACTTCTAGCGCGACGGGAAGAGCCCCCAGGATGGCGCCGCCTACGTCTCGCTCTTCATAGCGCTGGCGGGCG ] [+] EMBL CB631569 [ GCGGCGCCTTCCGAGACGGCGTCGACGTCGGTGACCAAGACCGTGAACGGGTCGCACCACTTCAAGATCGCCGGGTACCCGCTGGCCAAGGGGATCGGGGTCGGGAAATACATCGCCTCCGAGTGCTTCACCGTCGGCGGCTACGACTGGGCGATCTACTTCTACCCCGACGGGAAGAGCCCCGAGGATGGCGCCGCCTACGTCTCGCTCTTCATAGCGCTCGCCAGCGAGGGCACCGACGTCCGCGCGCTCTTCGAGCTCACGCTCGTCGACCAGAGCGGCAAGGGGCAGGACAAGGTGCACACCCACTTTGGGAGGTCGCTCGAGGGCGGGCCATATACCCTCAAGTACCGGGGGAGCATGTGGGGTTACAAGCGTTTCTTCAAACGGTCTGCCTTGGAAACATCAGATTATCTTAAAGATGATTGCCTTTTGGTGAATTGTACTGTTGGTGTTGTCCAATCACATACTGAAGGGCCAAAGATATATACAATACCAGTGCCACCATCCAATATGTCTCAGCATATTGGCCAGCTACTGATGGATGGAAAGAGAACTGATATTACATTTGAAGTTGATGGAGAGGTGTTCCCTGCTCACAAGGTTGTTCTTGCAGCCCGGTCACCAGTTTTCAGGGCACAGCTTTTCGGTCCAATGAAGGATAAAAACATGAAGCGTATAACGATTGAGGATATGGAGGCTTCAGTTTTTAAGGCCTTACTCCATTTTATGTACTGGGATGAGTTGCCTGATATCGAAGAGCTTACTGGCCTAAATACAACTTGGGTATCCACTTTGATGGCTCAGCATTTACTT ] [+] EMBL CB671163 [ AAGGGCCAAAGATATATACAATACCAGTGCCACCATCCAATATGTCTCAGCATATTGGCCAGCTACTGACGGATGGAAAGAGAACTGATATTACATTTGAAGTTGATGGAGAGGTGTTCCCTGCTCACAAGGTTGTTCTTGCAGCCCGGTCACCAGTTTTCAGGGCACAGCTTTTCGGTCCAATGAAGGATAAAAACATGAAGCGTATAACGATTGAGGATATGGAGGCTTCAGTTTTTAAGGCCTTACTCCATTTTATGTACTGGGATGAGTTGCCTGATATCGAAGAGCTTACTGGCCTAAATACAACTTGGGTATCCACTTTGATGGCTCAGCATTTACTTGCAGCTGCGGATCGTTATGCATTGGAGAGACTAAAGTTGCTCTGTGAGCTCAAGCTTTGTGAAGATGTTGCAATAAACACAGTTGCAAACACTTTGGCACTGGCTGAACAG CACCACTGTTATCAGCT AAAAACTGTTT GCCT GAGA TTTGTGG CTTTG CCTG AGAATTTAAAAGCTGTCATGCAAA CCGATGGGTTTGATTA TTTGCAGCAAAGCTG CCCATCCTTGCTGACCGAGCTTCT GGAGTATGTG GCCAAGGTAGGGGAGCATTCGGTGAGCCCCTGCTTGTATTCGAACGAAGTCCTT GATGGTGGCGATGCCAATGGAAGACGTGTGAAACCGCGGATTTAACGGCAGCCCTGATAAAAACCTAGCTGGATTTCCTTGTGTTGTTTCCGTGTAAAGTGTTATAGTTCTATAACGGCACTTTTCTGGTGCCATATTATAT CATG CATGTTGTAGTGTCTTGTGACTTCTATA CTCCCCCTATCGTTGCT ] [+] EMBL AU056959 [ AACGATTGAGGATATGGAGGCTTCAGTTTTTAAGGCCTTACTCCATTTTATGTACTGGGATGAGTTGCCTGATATCGAAGAGCTTACTGGCCTAAATACAACTTGGGTATCCACTTTGATGGCTCAGCATTTACTTGCAGCTGCGGATCGTTATGCATTGGAGAGACTAAAGTTGCTCTGTGAGCTCAAGCTTTGTGAAGATGTTGCAATAAACACAGTTGCAAACACTTTGGCACTGGCTGAACAG CACCACTGTTATCAGCT AAAAACTGTTT GCCT GAGA TTTGTGG CTTTG CCTG AGAATTTAAAAGCTGTCATGCAAA CCGATGGGTTTGATTA TTTGCAGCAAAGCTG CCCATCCTTGCTGACCGAGCTTCTGGGAGTATGTG GCCAAGGTAGGGGAGCATTCGGTGAGCCCCTGCTTGTATTCGAACGAAGTCCTTGGATGGTGGCGATGCCAATGGAAGACGTGTGAAACCGCGGATTTAACGGCAGCCCTGATAAAAACCTAGCTGGATTTCCTTGTGTTGTTTCCGTGTAAAGTGTTATAGTTCTATAACGGCACTTTTCTGGTGCCATATTATAT CATG CATGTTGTAGTGTCTTGTGACTTCTATACCTCCCCCTATCGTTGCNACTCTGGAGCTGAGTTGTTGCTAATATATGTGTTCTACTGACTAGTGTACTGCAAAATTGCATT ] [+] EMBL AU031303 [ GCCTTACTCCATTTTATGTACTGGGATGAGTTGCCTGATATCGAAGAGCTTACTGGCCTAAATACAACTTGGGTATCCACTTTGATGGCTCAGCATTTACTTGCAGCTGCGGATCGTTATGCATTGGAGAGACTAAAGTTGCTCTGTGAGCTCAAGCTTTGTGAAGATGTTGCAATAAACACAGTTGCAAACACTTTGGCACTGGCTGAACAG CACCACTGTTATCAGCT AAAAACTGTTT GCCT GAGA TTTGTGG CTTTG CCTG AGAATTTAAAAGCTGTCATGCAAA CCGATGGGTTTGATTA TTTGCAGCAAAGCTG CCCATCCTTGCTGACCGAGCTTCT GGAGTATGTG GCCAAGGTAGGGGAGCATTCGGTGAGCCCCTGCTTGTATTCGAACGAAGTCCTTGGATGGTGGCGATGCCAATGGAAGACGTGTGAAACCGCGGATTTAACGGCAGCCCTGATAAAAACCTAGCTGGATTTCCTTGTGTTGTTTCCGTGTAAAGTGTTATAGTTCTATAACGGCACTTTTCTGGTGCCATATTATAT CATG CATGTTGTAGTGTCTTGTGACTTCTATACCTCCCCCTATCGnngc ] [-] EMBL CB631570 [ CACTTTGATGGCTCAGCATTTACTTGCAGCTGCGGATCGTTATGCATTGGAGAGACTAAAGTTGCTCTGTGAGCTCAAGCTTTGTGAAGATGTTGCAATAAACACAGTTGCAAACACTTTGGCACTGGCTGAACAG CACCACTGTTATCAGCT AAAAACTGTTT GCCT GAGA TTTGTGG CTTTG CCTG AGAATTTAAAAGCTGTCATGCAAA CCGATGGGTTTGATTA TTTGCAGCAAAGCTG CCCATCCTTGCTGACCGAGCTTCT GGAGTATGTG GCCAAGGTAGGGGAGCATTCGGTGAGCCCCTGCTTGTATTCGAACGAAGTCCTT GATGGTGGCGATGCCAATGGAAGACGTGTGAAACCGCGGATTTAACGGCAGCCCTGATAAAAACCTAGCAGGATTTCCTTGTGTTGTTTCCGTGTAAAGTGTTATAGTTCTATAACGGCACTTTTCTGGTGCCATATTATAT CATG CATGTTGTAGTGTCTTGTGACTTCTATACCTCCCCCTATCGTTGCTACTCTGGAGCTGAGTTGTTGCTAATATATGTGTTCTACTGACTAGTGTACTGCAAAATTGCATTGCTGCGAAGCACATGGAGCTTCGCAGCCTGTGACCATAAAGTGCACTCAGGTGGCACGGCAAAGGTGGACTGGGCGCAAGGTTTTGTCGGTGGAAATAACGGTGCAGAATGTTTCTATGGAAGTTTAACTTTGTGCTTAGGTCAGCTTTGTCGATTTGTAGTCGTCTGTATGACTGTAATTCAATTGGAATGGTGAAATGCAATGAAATGTATCGGTTGGATCGA ] [-] EMBL CB671164 [ TTGCAGCTGCGGATCGTTATGCATTGGAGAGACTAAAGTTGCTCTGTGAGCTCAAGCTTTGTGAAGATGTTGCAATAAACACAGTTGCAAACACTTTGGCACTGGCTGAACAG CACCACTGTTATCAGCT AAAAACTGTTT GCCT GAGA TTTGTGG CTTTG CCTG AGAATTTAAAAGCTGTCATGCAAA CCGATGGGTTTGATTA TTTGCAGCAAAGCTG CCCATCCTTGCTGACCGAGCTTCT GGAGTATGTG GCCAAGGTAGGGGAGCATTCGGTGAGCCCCTGCTTGTATTCGAACGAAGTCCTT GATGGTGGCGATGCCAATGGAAGACGTGTGAAACCGCGGATTTAACGGCAGCCCTGATAAAAACCTAGCTGGATTTCCTTGTGTTGTTTCCGTGTAAAGTGTTATAGTTCTATAACGGCACTTTTCTGGTGCCATATTATAT CATG CATGTTGTAGTGTCTTGTGACTTCTATACCTCCCCCTATCGTTGCTACTCTGGAGCTGAGTTGTTGCTAATATATGTGTTCTACTGACTAGTGTACTGCAAAATTGCATTGCTGCGAAGCACATGGAGCTTCGCAGCCTGTGACCATAAAGTGCACTCAGGTGGCACGGCAAAGGTGGACTGGGCGCAAGGTTTTGTCGGTGGAAATAACGGCGCAGAATGTTTCTATGGAAGTTTAACTTTGTGCTTAGGTCAGCTTTGTCGATTTGTAGTCGTCTGTATGACTGTAATTCAATTGGAATGGTGAAGTGCAATGAAATGTATCGGTTAGATCGTGTCA ] [-] EMBL CB672172 [ ATCGTTATGCATTGGAGAGACTAAAGTTGCTCTGTGAGCTCAAGCTTTGTGAAGATGTTGCAATAAACACAGTTGCAAACACTTTGGCACTGGCTGAACAG CACCACTGTTATCAGCT AAAAACTGTTT GCCT GAGA TTTGTGG CTTTG CCTG AGAATTTAAAAGCTGTCATGCAAA CCGATGGGTTTGATTA TTTGCAGCAAAGCTG CCCATCCTTGCTGACCGAGCTTCT GGAGTATGTG GCCAAGGTAGGGGAGCATTCGGTGAGCCCCTGCTTGTATTCGAACGAAGTCCTT GATGGTGGCGATGCCAATGGAAGACGTGTGAAACCGCGGATTTAACGGCAGCCCTGATAAAAACCTAGCTGGATTTCCTTGTGTTGTTTCCGTGTAAAGTGTTATAGTTCTATAACGGCACTTTTCTGGTGCCATATTATAT CATG CATGTTGTAGTGTCTTGTGACTTCTATACCTCCCCCTATCGTTGCTACTCTGGAGCTGAGTTGTTGCTAATATATGTGTTCTACTGACTAGTGTACTGCAAAATTGCATTGCTGCGAAGCACATGGAGCTTCGCAGCCTGTGACCATAAAGTGCACTCAGGTGGCACGGCAAAGGTGGACTGGGCGCAAGGTTTTGTCGGTGGAAATAACGGCGCAGAATGTTTCTATGGAAGTTTAACTTTGTGCTTAGGTCAGCTTTGTCGATTTGTAGTCGTCTGTATGACTGTAATTCAATTGGAATGGTGAAAAGGAATGAAATGTATCGGTTAGATCGTGTCAAACCTTAAAAGG] [+] EMBL C28346 [ GCAAACACTTTGGCACTGGCTGAACAG CACCACTGTTATCAGCT AAAAACTGTTT GNCT GAGA TTTGTGG CTTTG CCTG AGAATTTAAAAGCTGTCATGCAAA CCGATGGGTTTGATTA TTTGCAGCAAAGCTN CCCATCCTTGCTGACCGAGCTTCT GGAGTATGTG GCCAAGGTAGGGGAGCATTCGGTGAGCCCCTGCTTGTATTCGAACG AGTCCTT GATGGTGGCGATGCCAATGG AGNCGTGTG AACCGCGGATTTAACGGCAG CCTGAT AAAACCTAGCTGGA TTCCTTGTGTTGTTTCCGTGT AAGTGTTATAG TCTATAACGGCAC TTTCTGGNGCCATA TATAT CATG CATGTTGTAGTGNCTTGTGACTTCTATACCT CCCCTATCG TGCTACTCTGGNGCTGAG ] [+] EMBL AU056960 [ TGGCTGAACAGCCACCACTGTTATCAGCTAAAAAACTGTTTNCCCTGGAGATTTTGTGGCCTTTGCCCTGAAGAATTTAAAAGCTGTCATGCAAACCCGATGGGTTTGATTATTTTGCAGCAAAGCTGCCCCANCCTTGCTGACCGAGCTTCT GGAGTATGTGNCCCAAGGTAGGGGAGCATTCGGTGAGCCCCTGCTTGTATTCGAACGAAGTCCTT GATGGTGGCGATGCCAATGGAAGACGTGTGAAACCGCGGATTTAACGGCAGCCCTGATAAAAACCTAGCTGGATTTCCTTGTGTTGTTTCCGTGTAAAGTGTTATAGTTCTATAACGGCACTTTTCTGGTGCCATATTATATCCATGCCATGTTGTAGTGTCTTGTGACTTCTATACCTCCCCCTATCGTTGCTACTCTGGAGCTGAGTTGTTGCTAATATATGTGTTCTACTGACTAGTGTACTGCAAAATTGCATTGCTGCGAAGCACATGGAG TTCGCAGCCTGTGACCATAAAGTGCACTCAGGTGGCACGGCAAAGGTGGACTGGGCGCAAGGTTTTGTCGGTGGAAATAACGGCGCAGAATGTTTCTATGGAAGTTTAACTTTGTGCTTAGGTCAGCTTTGTCGATTTGTAGTCGTCTGTATGACTGTAATTCAATTGGAATGGTGAAATGCAATGAAATGTATCGGTTAaaaaaaa ] [-] EMBL CB637641 [ ATCCTTTTTGACGGAGCTTTT GGAGTATGTG GCCAAGGTAGGGGAGCATTCGGTGAGCCCCTGCTTGTATTCGAACGAAGTCCTT GATGGTGGCGATGCCAATGGAAGACGTGTGAAACCCCGGATTTAACGGCAGCCCTGATAAAAACCTAGCTGGATTTCCTTGTGTTGTTTCCGTGTAAAGTGTTATAGTTCTATAACGGCACTTTTCTGGTGCCATATTATAT CATG CATGTTGTAGTGTCTTGTGACTTCTATACCTCCCCCTATCGTTGCTACTCTGGAGCTGAGTTGTTGCTAATATATGTGTTCTACTGACTAGTGTACTGCAAAATTGCATTGCTGCGAAGCACATGGAGCTTCGCAGCCTGTGACCATAAAGTGCACTCAGGTGGCACGGCAAAGGTGGACTGGGCGCAAGGTTTTGTCGGTGGAAATAACGGCGCAGAATGTTTCTATGGAAGTTTAACTTTGTGCTTAGGTCAGCTTTGTCGATTTGTAGTCGTCTGTATGACTGTAATTCAATTGGAATGGTGAAATGCAATGAAATG ] [+] EMBL CB671974 [ CGGCACCTTTCTGGTGCCATATTATAT CATG CATGTTGTAGTGTCTTGTGACTTCTATACCTCCCCCTATCGTTGCTACTCTGGAGCTGAGTTGTTGCTAATATATGTGTTCTACTGACTAGTGTACTGCAAAATTGCATTGCTGCGAAGCACATGGAGCTTCGCAGCCTGTGACCATAAAGTGCACTCAGGTGGCACGGCAAAGGTGGACTGGGCGCAAGGTTTTGTCGGTGGAAATAACGGCGCAGAATGTTTCTATGGAAGTTTAACTTTGTGCTTAGGTCAGCTTTGTCGATTTGTAGTCGTCTGTATGACTGTAATTCAATTGGAATGGTGAAATGCAATGAAATGTATCGGTT ] consensusID : consensus_14523#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 525 fasta sequence [AGACTAAAGTTGCTCTGTGAGCTCAAGC-TTTGTGAAGAT-GTTGCAATAAACACAGTTGCAAA-CACTTTGGCACTGGCTGAACAGCACCACTGTTATCAGCTAAAAACTGTTTGCCT-GAGATTTGTGGCTTTGCCTGAGAATTTAAAAGCTGT-CATGCAAACCGATGGGTTTGATTA-TTTGCAGCAAAGCTGCCCATCCTTGCTGACCGAGCTTCTGGAGTATGTGGCCAAGGTAGGGGAGCATTCGGTGAGCCCCTGCTTGTATTCGAACGAAGTCCTTGATGGTGGCGATGCCCATGGAAGACGTGTGAAACCGCGGATTTAACGGCAGCCCTGATAAAAACCTAGCTGGATTTCCTTGTGTTGTTTCCGTGTAAAGTGTTATAGTTCTATAACGGCACTTTTCTGGTGCCATATTATATCATGCATGTTGTAGTGTCTTGTGACTTCTATACCTCCCCCTATCGTTGCTACTCTGGAGCTGAGTTGTTGCTAATATATGTGTTCTACTGACTAACANAAAAAA] [+] EMBL CA754557 [AGACTAAAGTTGCTCTGTGAGCTCAAGC TTTGTGAAGAT GTTGCAATAAACACAGTTGCAAA CACTTTGGCACTGGCTGAACAGCACCACTGTTATCAGCTAAAAACTGTTTGCCT GAGATTTGTGGCTTTGCCTGAGAATTTAAAAGCTGT CATGCAAACCGATGGGTTTGATTA TTTGCAGCAAAGCTGCCCATCCTTGCTGACCGAGCTTCTGGAGTATGTGGCCAAGGTAGGGGAGCATTCGGTGAGCCCCTGCTTGTATTCGAACGAAGTCCTTGATGGTGGCGATGCCCATGGAAGACGTGTGAAACCGCGGATTTAACGGCAGCCCTGATAAAAACCTAGCTGGATTTCCTTGTGTTGTTTCCGTGTAAAGTGTTATAGTTCTATAACGGCACTTTTCTGGTGCCATATTATATCATGCATGTTGTAGTGTCTTGTGACTTCTATACCTCCCCCTATCGTTGCTACTCTGGAGCTGAGTTGTTGCTAATATATGTGTTCTACTGACTAACANAAAAAA] [+] EMBL AU031304 [ AGCTTTTGTGAAGATGGTTGCAATAAACACANTTGCAAACCACTTTGGCACTGGCTGAACAGCACCACTGTTATCAGCTAAAAACTGTTNNCCTGGAGATTTGTGGCTTTGCCTGAGAATTTAAAAGCTGTCCATGCAAACCGATGGGTTTGATTATTTTGCAGCAAAGCTGCCCATCCTTGCTGACCGAGCTTCTGGAGTATGTGGCCAAGGTAGGGGAGCATTCGGTGAGCCCCTGCTTGTATTCGAACGAAGTCCTTGATGGTGGCGATGCCAATGGAAGACGTGTGAAACCGCGGATTTAACGGCAGCCCTGATAAAAACCTAGCTGGATTTCCTTGTGTTGTTTCCGTGTAAAGTGTTATAGTTCTATAACGGCACTTTTCTGGTGCCATATTATATCATGCATGTTGTAGTGTCTTGTGACTTCTATACCTCCCCCTATCGTTGCTACTCTGGAGCTGAGTTGTTGCTAATATATGTGTTCTACTGACTAAAAAAAA ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14523#0 AGCCAAAACCAAACTCCATCACCTCCTCCTCCGTCTCCTTCCCCCACCATTTCTCCCCCA 60 consensus_14523#1 ------------------------------------------------------------ consensus_14523#0 AATCCGTCTCCTCCTCCTCCCCCACCCAAATCTCCCACCTCCGCCGTCGCGGAATCCGCC 120 consensus_14523#1 ------------------------------------------------------------ consensus_14523#0 GCGACGACCTCCCCTCGATCCGCCCGATCCGACCCCGGATCGGATCCCACCGTCGCCGCC 180 consensus_14523#1 ------------------------------------------------------------ consensus_14523#0 CGCGCGCGTGGTGGTTGGGTGTGCGGGGTGTGCAAACCCTAGGTCTCCGATCCGGATCCC 240 consensus_14523#1 ------------------------------------------------------------ consensus_14523#0 CCCCCCACCCACCCCGCCGATGGGCGCTGGCCGGGCTTGCCGCGGCGGCCCCTCCTCCTC 300 consensus_14523#1 ------------------------------------------------------------ consensus_14523#0 CTCCCCCGCCGCTGCCGCCGCTGCGGTGGGGCGGCCGTTCCCTCCGATCGCCGCTTCGTG 360 consensus_14523#1 ------------------------------------------------------------ consensus_14523#0 CCCCTTCTCGTCGTCTTCGGCGGCGGCTGCGGCCCCCGCGGCGCCTTCCGAGACGGCGTC 420 consensus_14523#1 ------------------------------------------------------------ consensus_14523#0 GACGTCGGTGACCAAGACCGTGAACGGGTCGCACCACTTCAAGATCGCCGGGTACCCGCT 480 consensus_14523#1 ------------------------------------------------------------ consensus_14523#0 GGCCAAGGGGATCGGGGTCGGGAAATACATCGCCTCCGAGTGCTTCACCGTCGGCGGCTA 540 consensus_14523#1 ------------------------------------------------------------ consensus_14523#0 CGACTGGGCGATCTACTTCTACCCCGACGGGAAGAGCCCCGAGGATGGCGCCGCCTACGT 600 consensus_14523#1 ------------------------------------------------------------ consensus_14523#0 CTCGCTCTTCATAGCGCTCGCCAGCGAGGGCACCGACGTCCGCGCGCTCTTCGAGCTCAC 660 consensus_14523#1 ------------------------------------------------------------ consensus_14523#0 GCTCGTCGACCAGAGCGGCAAGGGGCAGGACAAGGTGCACACCCACTTTGGGAGGTCGCT 720 consensus_14523#1 ------------------------------------------------------------ consensus_14523#0 CGAGGGCGGGCCATATACCCTCAAGTACCGGGGGAGCATGTGGGGTTACAAGCGTTTCTT 780 consensus_14523#1 ------------------------------------------------------------ consensus_14523#0 CAAACGGTCTGCCTTGGAAACATCAGATTATCTTAAAGATGATTGCCTTTTGGTGAATTG 840 consensus_14523#1 ------------------------------------------------------------ consensus_14523#0 TACTGTTGGTGTTGTCCAATCACATACTGAAGGGCCAAAGATATATACAATACCAGTGCC 900 consensus_14523#1 ------------------------------------------------------------ consensus_14523#0 ACCATCCAATATGTCTCAGCATATTGGCCAGCTACTGACGGATGGAAAGAGAACTGATAT 960 consensus_14523#1 ------------------------------------------------------------ consensus_14523#0 TACATTTGAAGTTGATGGAGAGGTGTTCCCTGCTCACAAGGTTGTTCTTGCAGCCCGGTC 1020 consensus_14523#1 ------------------------------------------------------------ consensus_14523#0 ACCAGTTTTCAGGGCACAGCTTTTCGGTCCAATGAAGGATAAAAACATGAAGCGTATAAC 1080 consensus_14523#1 ------------------------------------------------------------ consensus_14523#0 GATTGAGGATATGGAGGCTTCAGTTTTTAAGGCCTTACTCCATTTTATGTACTGGGATGA 1140 consensus_14523#1 ------------------------------------------------------------ consensus_14523#0 GTTGCCTGATATCGAAGAGCTTACTGGCCTAAATACAACTTGGGTATCCACTTTGATGGC 1200 consensus_14523#1 ------------------------------------------------------------ consensus_14523#0 TCAGCATTTACTTGCAGCTGCGGATCGTTATGCATTGGAGAGACTAAAGTTGCTCTGTGA 1260 consensus_14523#1 ----------------------------------------AGACTAAAGTTGCTCTGTGA 20 ******************** consensus_14523#0 GCTCAAGCTTTGTGAAGATGTTGCAATAAACACAGTTGCAAACACTTTGGCACTGGCTGA 1320 consensus_14523#1 GCTCAAGCTTTGTGAAGATGTTGCAATAAACACAGTTGCAAACACTTTGGCACTGGCTGA 80 ************************************************************ consensus_14523#0 ACAGCACCACTGTTATCAGCTAAAAACTGTTTGCCTGAGATTTGTGGCTTTGCCTGAGAA 1380 consensus_14523#1 ACAGCACCACTGTTATCAGCTAAAAACTGTTTGCCTGAGATTTGTGGCTTTGCCTGAGAA 140 ************************************************************ consensus_14523#0 TTTAAAAGCTGTCATGCAAACCGATGGGTTTGATTATTTGCAGCAAAGCTGCCCATCCTT 1440 consensus_14523#1 TTTAAAAGCTGTCATGCAAACCGATGGGTTTGATTATTTGCAGCAAAGCTGCCCATCCTT 200 ************************************************************ consensus_14523#0 GCTGACCGAGCTTCTGGAGTATGTGGCCAAGGTAGGGGAGCATTCGGTGAGCCCCTGCTT 1500 consensus_14523#1 GCTGACCGAGCTTCTGGAGTATGTGGCCAAGGTAGGGGAGCATTCGGTGAGCCCCTGCTT 260 ************************************************************ consensus_14523#0 GTATTCGAACGAAGTCCTTGATGGTGGCGATGCCAATGGAAGACGTGTGAAACCGCGGAT 1560 consensus_14523#1 GTATTCGAACGAAGTCCTTGATGGTGGCGATGCCCATGGAAGACGTGTGAAACCGCGGAT 320 ********************************** ************************* consensus_14523#0 TTAACGGCAGCCCTGATAAAAACCTAGCTGGATTTCCTTGTGTTGTTTCCGTGTAAAGTG 1620 consensus_14523#1 TTAACGGCAGCCCTGATAAAAACCTAGCTGGATTTCCTTGTGTTGTTTCCGTGTAAAGTG 380 ************************************************************ consensus_14523#0 TTATAGTTCTATAACGGCACTTTTCTGGTGCCATATTATATCATGCATGTTGTAGTGTCT 1680 consensus_14523#1 TTATAGTTCTATAACGGCACTTTTCTGGTGCCATATTATATCATGCATGTTGTAGTGTCT 440 ************************************************************ consensus_14523#0 TGTGACTTCTATACCTCCCCCTATCGTTGCTACTCTGGAGCTGAGTTGTTGCTAATATAT 1740 consensus_14523#1 TGTGACTTCTATACCTCCCCCTATCGTTGCTACTCTGGAGCTGAGTTGTTGCTAATATAT 500 ************************************************************ consensus_14523#0 GTGTTCTACTGACTAGTGTACTGCAAAATTGCATTGCTGCGAAGCACATGGAGCTTCGCA 1800 consensus_14523#1 GTGTTCTACTGACTAACANAAAAAA----------------------------------- 525 *************** * * consensus_14523#0 GCCTGTGACCATAAAGTGCACTCAGGTGGCACGGCAAAGGTGGACTGGGCGCAAGGTTTT 1860 consensus_14523#1 ------------------------------------------------------------ consensus_14523#0 GTCGGTGGAAATAACGGCGCAGAATGTTTCTATGGAAGTTTAACTTTGTGCTTAGGTCAG 1920 consensus_14523#1 ------------------------------------------------------------ consensus_14523#0 CTTTGTCGATTTGTAGTCGTCTGTATGACTGTAATTCAATTGGAATGGTGAAATGCAATG 1980 consensus_14523#1 ------------------------------------------------------------ consensus_14523#0 AAATGTATCGGTTAGATCGAGTCAAACCTTAAAAGG 2016 consensus_14523#1 ------------------------------------ |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||