These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14862#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 2281 fasta sequence [TTTTTTTTGAGATGAATAGTGCACTTAAACTATATATGTTCTCAAATGAATCTGTACCAATCAAATTGAAAATTTCTGCTCCTTTTACAGCAACATTATCAAGGCATATTATACATCAATAACAATAAATACAATAACTAGAATATGAATGACGATCAAACATGCACAAGGAATAAACAAACGGTTGTAAATA-CAATCGACCATTTGTATTCTCTTAAAACACCCAACATTTTTTTTTACCATGATGAGGCAATACCCAGAAGCTAGATGACCAGTCAAAGAAAGAGATGCCATATAGCACAAAACAAAG-AAATGTCATCAGAATTTATGCTAAGGTT----GGG-TTTTCTTCTTCAGCAGACCACCAAATTTCTTCAGCAAGGGCTTCTTCTTTTGCGGCTGCTGCTTGG-GCGGTG-ATGCGTTGCCATTGCTCGCCGTCG-TGGAGTGCAAACCATTGCCATCAACAATGGAATCTCCCGTGTTGGACTCTAAATCAACTTCTGATTCACCATCGTTTCCCTTCTCCTTAGATGAGGCATCATCAGTAACCTT-GC-TGTTCTCCCACATCTTTGCAA-CTACCATTA-CCGGTT-CATCATCCTCGC-TGCCCCCCT-TGACATTACTTTCTTCCTTGTGACTACCATTTGTAGCTCCATCTTTTGCATTTGCAAGCACGGAGAGCTCCTTTATCTTCTCAGAAGCAACAAGTTCCTTTGCTTGCAAATCATCGTTCTCTTGTTTTATGTTCTGCAACTCATTTTCTTTGTCTAGTAGCTTTTCCTTCCACTGGAAGGTCTCGGCCTTGGCTTCCTCGCATGTTTTGTTAGCTTCCATTAGCTGAGCTTCAAGATGCTTCAACTTCTCCTGTAACTCAGCATTTTCACTTTCTTTGCCTTTTACAGCCTCCAAGGTCTTGTCCATCTGAGCTCTGGCGTTGATGATTTCTTCTTCTGATTTTTTAATTGAGTTAACAAAACTTAGCTCTTTGGACTGCCATTCCTCAGACGCACTCTTGGTTTCTGCTTCCATTCTCTCAACTGACTTCTTGAGACAAACTTTTTCATAGTTTGCTTCGTCAAGCATTACCTCATAGCTCTCCTTTGTATTCTGCAGACTTACATTGAGCTCCTCTACCTGTGCACGAGCACGATCAATCTCCTCTTGTTTATCTAGGTACTTCTCCTGCGCCACTCTCAGTTGAGCTGACATTTCGTGCAAAGCAGAGGCTTGACCCTCCATGGCCTTCTTAATCTTCTCAACTTCAGCTTTGCTAGCTTCAAGTTCCTTGGCTAGCATGTTCTTCTGTTCAATCAGGGTTTCCATTTCTGAACTGGCAATCTTGTCATTGTTAAGGTCTTCTTCCGCCGCTTCGAGCTTCAACCTAAGGTCTTCTATCTCCAACCTTAATTCATCAGCTTCCTTATCAGCAGTATGAAAATCTTCTTTCTGCTTGGCTACTTCATCCTCCAAAGACCTGACCTTATCCTGAAGTGCTTCGATTTCAGATTCTTTTTCTTGGAGCAGAGTCATTTTTGCATCCAATTCTTTCATTGCTGATTCTAAGGACTCGCCCTTGAGAATGTTAGACTGATCAGCTTCCTCCAACCTGACCTCCAATTCCAGTGCTTTTGTCTTCCATTTGCCAAGTAACTCCTCTGACCTCGCGCGCGCCTTCTTAACATCAGCGATTTCAACTTCAAGCTGTTCAACCACACCTTCCAATTCAACTGCCCTCTGCTCAGCGACATTTGCTTTCTCAAGCTCAAGCTTCAATCCAGAGTTCTCTTCTTCAAGCTTCCTAATGTGCTCCACAGCACCTTTTGACGAGCTCCCTACCTCGGAATCAAGCAGCCCTTTGAGATGCGCCACCTCCGCATTGAGGAGCTTGATCTTCTCGGCATTCTCATCTGAAGCCCTCATGGCATCAGGTGCCTGGGTAAGCGCCGCGTTCTTGGCATCGATTGCATCCGCTAGCTCATACCTGGCCTGCTCAAGCTGCTCCACCGTCGAACGCAGTGCGGCCATGTCAGCCTCCTGCTGGCTCTGCATGCTCGCCAGCTTCGTCCGCAGCTCGTCCTCCATGCTCGCGCTCGCCTGCTCCGCTTCGGCATCGCCGGACTGCTCCGCCGCCGACTCCTCCGCCGCCTTGCTCTGCGCAGCGAGCGCCTCCTGGAGCTTCGCATTGGCCTCATCAGCCGCCCTCTTGGCACGCTCCAGTTCATCCAGGACTTTCCCCCTCTCCTTCTCCTTCTCCACCAACTCCTCCTTGGCCTTCACGAGCTCCTGC] [-] EMBL AT003658 [TTTTTTTTGAGATGAATAGTGCACTTAAACTATATATGTTCTCAAATGAATCTGTACCAATCAAATTGAAAATTTCTGCTCCTTTTACAGCAACATTATCAAGGCATATTATACATCAATAACAATAAATACAATAACTAGAATATGAATGACGATCAAACATGCACAAGGAATAAACAAACGGTTGTAAATA CAATCGACCATTTGTATTCTCTTAAAACACCCAACATTTTTTTTTACCATGATGAGGCAATACCCAGAAGCTAGATGACCAGTCAAAGAAAGAGATGCCATATAGCACAAAACAAAG AAATGTCATCAGAATTTATGCTAAGGTT GGG TTTTCTTCTTCAGCAGACCACCAAATTTCTTCAGCAAGGGCTTCTTCTTTTGCGGCTGCTGCTTGG GCGGTG ATGCGTTGCCATTGCTCGCCGTCG TGGAGTGCAAACCATTGCCATCAACAATGGAATCTCCCGTGTTGGACTCTAAATCAACTTCTGATTCACCATCGTTTCCCTTCTCCTTAGATGAGGCATCATCAGTAACCTT GC TGTTCTCCCACATCTTTGCAA CTACCATTACCCGGTT C ] [-] EMBL AT003484 [TTTTTTTTGAGATGAATAGTGCACTTAAACTATATATGTTCTCAAATGAAGCTGTACCAATCAAATTGAAAATTTCTGCTCCTTTTACAGCAACATTATCAAGGCATATTATACATCAATAACAATAAATACAATAACTAGAATATGAATGACGATCAAACATGCACAAGGAATAAACAAACGGTTGTAAATA CAATCGACCATTTGTATTCTCTTAAAACACCCAACATTTTTTTTTACCATGATGAGGCAATACCCAGAAGCTAGATGACCAGTCAAAGAAAGAGATGCCATATAGCACAAAACAAAGAAAATGTCATCAGAATTTATG TAAGGTTTGGGGGGTTTTTCTTCTTCAGCAGACCACCAAATTTCTTCAGCANGGGCTTCTTCTTTTGCGGNTGCTG TTGGNCCGGNGAANGCCGTGCC TNG TGGCCNGCGNNGGAGTGC AACCA TGGCAT AACAngga ] [-] EMBL AT003508 [TTTTTTTTGAGATGAATAGTGCACTTAAACTATATATGTTCTCAAATGAATCTGTACCAATCAAATTGAAAATTTCTGCTCCTTTTACAGCAACATTATCAAGGCATATTATACATCAATAACAATAAATACAATAACTAGAATATGAATGACGATCAAACATGCACAAGGAATAAACAAACGGTTGTAAATA CAATCGACCATTTGTATTCTCTTAAAACACCCAACATTTTTTTTTACCATGATGAGGCAATACCCAGAAGCTAGATGACCAGTCAAAGAAAGAGATGCCATATAGCACAAAACAAAG AAATGTCATCAGAATTTATGCTAAGGTT GGG TTTTCTTCTTCAGCAGACCACCAAATTTCTTCAGCAAGGGCTTCTTCTTTTGCGGCTGCTGCTTGG GCGGTG ATGCGTTGCCATTGCTCGCCGTCG TGGAGTGCAAACCATTGCCATCAACAATGGAATCTCCCGTGTTGGACTCTAAATCAACTTCTGATTCACCATCGTTTCCCTTCTCCTTAGATGAGGCATCATCAGTAACCTT GC TGTTCTCCCACATCTTTGCAA CTACCATTA CCGGGT CATCATCCTCGC TGC ] [-] EMBL AT003731 [TTTTTTTTGAGATGAATAGTGCACTTAAACTATATATGTTCTCAAATGAATCTGTACCAATCAAATTGAAAATTTCTGCTCCTTTTACAGCAACATTATCAAGGCATATTATACATCAATAACAATAAATACAATAACTAGAATATGAATGACGATCAAACATGCACAAGGAATAAACAAACGGTTGTAAATA CAATCGACCATTTGTATTCTCTTAAAACACCCAACATTTTTTTTTACCATGATGAGGCAATACCCAGAAGCTAGATGACCAGTCAAAGAAAGAGATGCCATATAGCACAAAACAAAG AAATGTCATCAGAATTTATGCTAAGGTT GGG TTTTNTTCTTCAGCAGACCACCAAATTTCTTCAGNANGGGCTTNTTCTTTTGCGGCTGCTGCTTGG GCGGTG ATGCGTTGCCATTGCTCGCCGTCG NGGAGTGCAAACCATTGCCATCAACAATGGAATCTCCCGTGTTGGACTCTAAATCAACTTCTGATTCACCATCGTTTCCCTTCTCCTTAGATGAGGCATCATCAGTAACCTT GC TGGTCTCCCACATNTTTGCAA CTACCATTA CCGGGT CATC ] [+] EMBL CB631874 [ tataAAAATTTCTGCTCCTTTTACAGCAACACCCTCAAGGGATATTATACATCAATAACAATAAATACAATAACTATAATATGAATGACGATCAAACATGCACAAGGAATAAACAAACGGTTGTAAATA CAATCGACCATTTGGATTCTCTTAAAACACCCAACATTTTTTTTTACCATGATGAGGCAATACCCAGAATCTACATGACCAGTCAAAGAAAGATATGCCATATATCACAAAACAAAG AAATGTCATCATAATTTATGCTAAGGTT GGG TTTTCTTCTTCAACAAACCACCAAATTTCTTCAGCAAGGGCTTCTTCTTTTGTGGCTGCTGCTTGG GCGGTG ATACGTTGCCATTGCTCCCCGTCG TGGACTGCAAACCATTGCCATCAACAATGGAATCTCCCGAGTTGGACTCTAAATCAACTTCTGATTCACCATCGATTCCCTTCTCCTTAGATGAGGCATCATCAGTAACCTT GC TGTTCTCCCACATCTTTGCAA CTACCATTA ACGGTT CATCATCCTCAC TGACCCCCT TGACATTACTTTCTTCCTTGTGACTACCATTTGTAGCTCCATCTTTTGCATTTGCAAGCACGGAGAGCTCCTTTATCTTCTCATAAGCAACAAGTTCCTTTGCTTGCAAATCATCGTTCTCTTGATTTATGGTCTGCAACTCATTTTCTTTGTCTAG ] [+] EMBL CB631910 [ TGCTCCTTTTACAGCAACATTATCAAGGCATATTATACATCAATAACAATAAATACAATAACTAGAATATGAATGACGATCAAACATGCACAAGGAATAAACAAACGGTTGTAAATA CAATCGACCATTTGTATTCTCTTAAAACACCCAACATTTTTTTTTACCATGATGAGGCAATACCCAGAAGCTAGATGACCAGTCAAAGAAAGAGATGCCATATAGCACAAAACAAAG AAATGTCATCAGAATTTATGCTAAGGTT GGG TTTTCTTCTTCAGCAGACCACCAAATTTCTTCAGCAAGGGCTTCTTCTTTTGTGGCTGCTGCTTGG GCGGTG ATGCGTTGCCATTGCTCGCCGTCG TGGACTGCAAACCATTGCCATCAACAATGGAATCTCCCGTGTTGGACTCTAAATCAACTTCTGATTCACCATCGTTTCCCTTCTCCTTAGATGAGGCATCATCAGTAACCTT GC TGTTCTCCCACATC ] [-] EMBL BI801284 [ tttTTTTAAATATCAATCGACCATTGGTATTCTCTTAAAACACCCAACATTTTTTTTTACCATGATGAGG AATACCCAGAAGCTAGATGACCAGTCAAAGAAAGAGATGCCATATAGCACAAAACAAAG AAATGTCATCAGAATTTATGCTAAGG T GGG TTTTCTTCTTCAGCAGACCACCAAATTTCTTCAGCAAGGGCTTCTTC TTTGTGGCTGCTGCTTGG GCGGTG ATGCG TGCCA TG TCGCCGTCG TGGACTG AAACCATTG CATCAACAATGGAATCTCCCGTG TGGACTCTAAATCAACTTCTGATTCACCATCGTTTCCCTTCTCCTTAGATGAGGCATCATCAGTAACCTTGGCGTGTTCTCCCACATCTTGGCAACCTACCATTA CCGGTTACATCATCCTCGCGTGTCCCCCTGTGACATTACTTTCTTCCTTGTGACTACCATTTGTAGCTCCATCTTTGGCATTGGCAAGCACGGAGAGCTCCTTTATCTTCTCAGAAGC ACAAGTTAC TTGGTTGCAAATCAT ] [+] EMBL CB621333 [ CCCCCT TGACATTACTTTCTTCCTTGTGACTACCATTTGTAGCTCCATCTTTTGCATTTGCAAGCACGGAGAGCTCCTTTATCTTCTCAGAAGCAACAAGTTCCTTTGCTTGCAAATCATCGTTCTCTTGTTTTATGTTCTGCAACTCATTTTCTTTGTCTAGTAGCTTTTCCTTCCACTGGAAGGTCTCGGCCTTGGCTTCCTCGCATGTTTTGTTAGCTTCCATTAGCTGAGCTTCAAGATGCTTCAACTTCTCCTGTAACTCAGCATTTTCACTTTCTTTGCCTTTTACAGCCTCCAAGGTCTTGTCCATCTGAGCTCTGGCGTTGATGATTTCTTCTTCTGATTTTTTAATTGAGTTAACAAAACTTAGCTCTTTGGACTGCCATTCCTCAGACGCACTCTTGGTTTCTGCTTCCATTCTCTCAACTGACTTCTTGAGACAA ] [+] EMBL CB621318 [ CCCCCT TGACATTACTTTCTTCCTTGTGACTACCATTTGTAGCTCCATCTTTTGCATTTGCAAGCACGGAGAGCTCCTTTATCTTCTCAGAAGCAACAAGTTCCTTTGCTTGCAAATCATCGTTCTCTTGTTTTATGTTCTGCAACTCATTTTCTTTGTCTAGTAGCTTTTCCTTCCACTGGAAGGTCTCGGCCTTGGCTTCCTCGCATGTTTTGTTAGCTTCCATTAGCTGAGCTTCAAGATGCTTCAACTTCTCCTGTAACTCAGCATTTTCACTTTCTTTGCCTTTTACAGCCTCCAAGGTCTTGTCCATCTGAGCTCTGGCGTTGATGATTTCTTCTTCTGATTTTTTAATTGAGTTAACAAAACTTAGCTCTTTGGACTGCCATTCCTCAGACGCACTCTTGGTTTCTGCTTCCATTCTCTCAACTGACTTCTTGAGAC ] [+] EMBL CB643971 [ CCCCCT TGACATTACTTTCTTCCTTGTGACTACCATTTGTAGCTCCATCTTTTGCATTTGCAAGCACGGAGAGCTCCTTTATCTTCTCAGAAGCAACAAGTTCCTTTGCTTGCAAATCATCGTTCTCTTGTTTTATGTTCTGCAACTCATTTTCTTTGTCTAGTAGCTTTTCCTTCCACTGGAAGGTCTCGG ] [+] EMBL CB625726 [ CCCCCT TGACATTACTTTCTTCCTTGTGACTACCATTTGTAGCTCCATCTTTTGCATTTGCAAGCACGGAGAGCTCCTTTATCTTCTCAGAAGCAACAAGTTCCTTTGCTTGCAAATCATCGTTCTCTTGTTTTATGTTCTGCAACTCATTTTCTTTGTCTAGTAGCTTTT ] [-] EMBL AK059702 [ CCCCT TGACATTACTTTCTTCCTTGTGACTACCATTTGTAGCTCCATCTTTTGCATTTGCAAGCACGGAGAGCTCCTTTATCTTCTCAGAAGCAACAAGTTCCTTTGCTTGCAAATCATCGTTCTCTTGTTTTATGTTCTGCAACTCATTTTCTTTGTCTAGTAGCTTTTCCTTCCACTGGAAGGTCTCGGCCTTGGCTTCCTCGCATGTTTTGTTAGCTTCCATTAGCTGAGCTTCAAGATGCTTCAACTTCTCCTGTAACTCAGCATTTTCACTTTCTTTGCCTTTTACAGCCTCCAAGGTCTTGTCCATCTGAGCTCTGGCGTTGATGATTTCTTCTTCTGATTTTTTAATTGAGTTAACAAAACTTAGCTCTTTGGACTGCCATTCCTCAGACGCACTCTTGGTTTCTGCTTCCATTCTCTCAACTGACTTCTTGAGGCAAACTTTTTCATAGTTTGCTTCGTCAAGCATTACCTCATAGCTCTCCTTTGTATTCTGCAGACTTACATTGAGCTCCTCTACCTGTGCACGAGCACGATCAATCTCCTCTTGTTTATCTAGGTACTTCTCCTGCGCCACTCTCAGTTGAGCTGACATTTCGTGCAAAGCAGAGGCTTGACCCTCCATGGCCTTCTTAATCTTCTCAACTTCAGCTTTGCTAGCTTCAAGTTCCTTGGCTAGCATGTTCTTCTGTTCAATCAGGGTTTCCATTTCTGAACTGGCAATCTTGTCATTGTTAAGGTCTTCTTCCGCCGCTTCGAGCTTCAACCTAAGGTCTTCTATCTCCAACCTTAATTCATCAGCTTCCTTATCAGCAGTATGAAAATCTTCTTTCTGCTTGGCTACTTCATCCTCCAAAGACCTGACCTTATCCTGAAGTGCTTCGATTTCAGATTCTTTTTCTTGGAGCAGAGTCATTTTTGCATCCAATTCTTTCATTGCTGATTCTAAGGACTCGCCCTTGAGA ] [-] EMBL CB625725 [ TTGAGCTCCTCTACCTGTGCACGAGCACGGTCAATCTCCTCTTGTTTATCTAGGTACTTCTCCTGCGCCACTCTCAGTTGAGCTGACATTTCGTGCAAAGCAGAGGCTTGACCCTCCATGGCCTTCTTAATCTTCTCAACTTCAGCTTTGCTAGCTTCAAGTTCCTTGGCTAGCATGTTCTTCTGTTCAATCAGGGTTTCCATTTCTGAACTGGCAATCTTGTCATTGTTAAGGTCTTCTTCCGCCGCTTCGAGCTTCAACCTAAGGTCTTCTATCTCCAACCTTAATTCATCAGCTTCCTTATCAGCAGTATGAAAATCTTCTTTCTGCTTGGCTACTTCATCCTCCAAAGACCTGACCTTATCCTGAAGTGCTTCGATTTCAGATTCTTTTTCTTGGAGCAGAGTCATTTTTGCATCCAATTCTTTCATTGCTGATTCTAAGGACTCGCCCTTGAGAATGTTAGACTGATCAGCTTCCTCCAACCTGACCTCCAATTCCAGTGCTTTTGTCTTCCATTTGCCAAGTAACTCCTCTGACCTCGCGCGCGCCTTCTTAACATCAGCGATTTCAACTTCAAGCTGTTCAACCACACCTTCCAATTCAACTGCCCTCTGCTCAGCGACATTTGCTTTCTCAAGCTCAAGCTTCAATCCAGAGTTCTCTTCTTCAAGCTTCCTAATGTGCTCCACAGCACCTTTTGACGAGCTCCCTACCTCGGAATCAAGCAGCCCTTTGAGATGCGCCACCTCCGCATTGAGGAGCTTGATCTTCTCGGCATTCTCATCTGAAGCCCTCATGGCATCAGGTGCCTG ] [-] EMBL CB621317 [ GGTACTTCTCNTGCGCCACTCTCAGTTGAGCTGACATTTCGTGCAAAGCAGAGGCTTGACCCTCCATGGCCTTCTTAATCTTCTCAACTTCAGCTTTGCTAGCTTCAAGTTCCTTGGCTAGCATGTTCTTCTGTTCAATCAGGGTTTCCATTTCTGAACTGGCAATCTTGTCATTGTTAAGGTCTTCTTCCGCCGCTTCGAGCTTCAACCTAAGGTCTTCTATCTCCAACCTTAATTCATCAGCTTCCTTATCAGCAGTATGAAAATCTTCTTTCTGCTTGGCTACTTCATCCTCCAAAGACCTGACCTTATCCTGAAGTGCTTCGATTTCAGATTCTTTTTCTTGGAGCAGAGTCATTTTTGCATCCAATTCTTTCATTGCTGATTCTAAGGACTCGCCCTTGAGAATGTTAGACTGATCAGCTTCCTCCAACCTGACCTCCAATTCCAGTGCTTTTGTCTTCCATTTGCCAAGTAACTCCTCTGACCTCGCGCGCGCCTTCTTAACATCAGCGATTTCAACTTCAAGCTGTTCAACCACACCTTCCAATTCAACTGCCCTCTGCTCAGCGACATTTGCTTTCTCAAGCTCAAGCTTCAATCCAGAGTTCTCTTCTTCAAGCTTCCTAATGTGCTCCACAGCACCTTTTGACGAGCTCCCTACCTCGGAATCAAGCAGCCCTTTGAGATGCGCCACCTCCGCATTGAGGAGCTTGATCTTCTCGGCATTATGATCT ] [-] EMBL CB621332 [ CCTGCGCCACTCTCAGTTGAGCTGACATTTCGTGCAAAGCAGAGGCTTGACCCTCCATGGCCTTCTTAATCTTCTCAACTTCAGCTTTGCTAGCTTCAAGTTCCTTGGCTAGCATGTTCTTCTGTTCAATCAGGGTTTCCATTTCTGAACTGGCAATCTTGTCATTGTTAAGGTCTTCTTCCGCCGCTTCGAGCTTCAACCTAAGGTCTTCTATCTCCAACCTTAATTCATCAGCTTCCTTATCAGCAGTATGAAAATCTTCTTTCTGCTTGGCTACTTCATCCTCCAAAGACCTGACCTTATCCTGAAGTGCTTCGATTTCAGATTCTTTTTCTTGGAGCAGAGTCATTTTTGCATCCAATTCTTTCATTGCTGATTCTAAGGACTCGCCCTTGAGAATGTTAGACTGATCAGCTTCCTCCAACCTGACCTCCAATTCCAGTGCTTTTGTCTTCCATTTGCCAAGTAACTCCTCTGACCTCGCGCGCGCCTTCTTAACATCAGCGATTTCAACTTCAAGCTGTTCAACCACACCTTCCAATTCAACTGCCCTCTGCTCAGCGACATTTGCTTTCTCAAGCTCAAGCTTCAATCCAGAGTTCTCTTCTTCAAGCTTCCTAATGTGCTCCACAGCACCTTTTGACGAGCTCCCTACCTCGGAATCAAGCAGCCCTTTGAGATGCGCCACCTCCGCATTGAGGAGCTTGATCTTCTCGGCATTCTCATCT ] [-] EMBL CB625782 [ AGTTGAGCTGACATNTCGTGCAAAGCAGAGGCTTGACCCTCCATGGCCTTCTTAATCTTCTCAACTTCAGCTTTGCTAGCTTCAAGTTCCTTGGCTAGCATGTTCTTCTGTTCAATCAGGGTTTCCATTTCTGAACTGGCAATCTTGTCATTGTTAAGGTCTTCTTCCGCCGCTTCGAGCTTCAACCTAAGGTCTTCTATCTCCAACCTTAATTCATCAGCTTCCTTATCAGCAGTATGAAAATCTTCTTTGTGGCCGGCTACTTCATCGTC ] [+] EMBL AK107413 [ CTTTGCTAGCTTCAAGTTCCTTGGCTAGCATGTTCTTCTGTTCAATCAGGGTTTCCATTTCTGAACTGGCAATCTTGTCATTGTTAAGGTCTTCTTCCGCCGCTTCGAGCTTCAACCTAAGGTCTTCTATCTCCAACCTTAATTCATCAGCTTCCTTATCAGCAGTATGAAAATCTTCTTTCTGCTTGGCTACTTCATCCTCCAAAGACCTGACCTTATCCTGAAGTGCTTCGATTTCAGATTCTTTTTCTTGGAGCAGAGTCATTTTTGCATCCAATTCTTTCATTGCTGATTCTAAGGACTCGCCCTTGAGAATGTTAGACTGATCAGCTTCCTCCAACCTGACCTCCAATTCCAGTGTTTTTGTCTTCCATTTGCCAAGTAACTCCTCTGACCTCGCGCGCGCCTTCTTAACATCAGCGATTTCAACTTCAAGCTGTTCAACCACACCTTCCAATTCAACTGCCCTCTGCTCAGCGACATTTGCTTTCTCAAGCTCAAGCTTCAATCCAGAGTTCTCTTCTTCAAGCTTCCTAATGTGCTCCACAGCACCTTTTGACGAGCTCCCTACCTCGGAATCAAGCAGCCCTTTGAGATGCGCCACCTCCGCATCGAGGAGCTTGATCTTCTCGGCATTCTCATCTGAAGCCCTCATGGCATCATCTGCCTGGGTAAGCGCCGCGTTCTTGGCATCGATTGCATCCGCTAGCTCATACCTGGCCTGCTCAAGCTGCTCCACCGTCGAACGCAGTGCGGCCATGTCAGCCTCCTGCTGGCTCTGCATGCTCGCCAGCTTCGTCCGCAGCTCGTCCTCCATGCTCGCGCTCGCCTGCTCCGCTTCGGCATCGCCGGACTGCTCCGCCGCCGACTCCTCCGCCGCCTTGCTCTGCGCAGCGAGCGCCTCCTGGAGCTTCGCATTGGCCTCATCAGCCGCCCTCTTGGCACGCTCCAGTTCATCCAGGACTTTCCCCCTCTCCTTCTCCTTCTCCACCAACTCCTCCTTGGCCTTCACGAGCTCCTGC] consensusID : consensus_14862#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 655 fasta sequence [TTTTTTGCTTGGAGATGAATAGTGCACTTAAACTATATATGTTCTCAAATGAATCTGTACCAATCAAATTGAAAATTTCTGGTCCTTTTACAGCAACATTATCAAGGGATATTATACCATCCAATAACCAATAAATACAATCAACTAGAATATGAATGGACGCATCAAACATGCACAAGGGAATAAACCAAACGGGTGTGGTAAATACCAATCGACCATTGTGGTNATTCTCTTAAAACACCCAACATTTTTTTTTACCATGATGCAGGCCAATACCCAGAAGCTAGATGACCCAGTCCAACAGCAACAGCAGCATGCCCATCATTAGCCACAACACACCAAAGCAAATGTCATCCAGAATTTCATTGCTCAAGGTATGGGTTTTCTATCTTCCAGCAGCACCCACCAAATTTCTTCCAGCCACAGGGCTTCTTCTATTGTAGGCTGCTTGCTTGGGCGGTGATGCGTTGCCATTGCTCGCCGTCGTGGACTGCAAACCATNTGCCATCAACAATGGAATCTCCCGTGTGGACTCTAAATCAATTCTGATTCACCATCGTTTCCCTTCTCCTTAGATGAGGCATCATCAGTAACTTGCTGGTTCTCCCACATCTTGGAACTACCATTAACGGTTCATCATCCTCGGTGTCCCCTT] [-] EMBL BM419948 [TTTTTTGCTTGGAGATGAATAGTGCACTTAAACTATATATGTTCTCAAATGAATCTGTACCAATCAAATTGAAAATTTCTGGTCCTTTTACAGCAACATTATCAAGGGATATTATACCATCCAATAACCAATAAATACAATCAACTAGAATATGAATGGACGCATCAAACATGCACAAGGGAATAAACCAAACGGGTGTGGTAAATACCAATCGACCATTGTGGTNATTCTCTTAAAACACCCAACATTTTTTTTTACCATGATGCAGGCCAATACCCAGAAGCTAGATGACCCAGTCCAACAGCAACAGCAGCATGCCCATCATTAGCCACAACACACCAAAGCAAATGTCATCCAGAATTTCATTGCTCAAGGTATGGGTTTTCTATCTTCCAGCAGCACCCACCAAATTTCTTCCAGCCACAGGGCTTCTTCTATTGTAGGCTGCTTGCTTGGGCGGTGATGCGTTGCCATTGCTCGCCGTCGTGGACTGCAAACCATNTGCCATCAACAATGGAATCTCCCGTGTGGACTCTAAATCAATTCTGATTCACCATCGTTTCCCTTCTCCTTAGATGAGGCATCATCAGTAACTTGCTGGTTCTCCCACATCTTGGAACTACCATTAACGGTTCATCATCCTCGGTGTCCCCTT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14862#0 ---TTTTTTTTGAGATGAATAGTGCACTTAAACTATATATGTTCTCAAATGAATCTGTAC 57 consensus_14862#1 TTTTTTGCTTGGAGATGAATAGTGCACTTAAACTATATATGTTCTCAAATGAATCTGTAC 60 *** ** ************************************************* consensus_14862#0 CAATCAAATTGAAAATTTCTGCTCCTTTTACAGCAACATTATCAAGGCATATTATACA-- 115 consensus_14862#1 CAATCAAATTGAAAATTTCTGGTCCTTTTACAGCAACATTATCAAGGGATATTATACCAT 120 ********************* ************************* ********* consensus_14862#0 TCAATAAC-AATAAATACAAT-AACTAGAATATGAATG-ACG-ATCAAACATGCACAAGG 171 consensus_14862#1 CCAATAACCAATAAATACAATCAACTAGAATATGAATGGACGCATCAAACATGCACAAGG 180 ******* ************ **************** *** ***************** consensus_14862#0 -AATAAAC-AAACGGTTGT---AAATAC-AATCGACCATT-TG--TATTCTCTTAAAACA 222 consensus_14862#1 GAATAAACCAAACGGGTGTGGTAAATACCAATCGACCATTGTGGTNATTCTCTTAAAACA 240 ******* ****** *** ****** *********** ** ************** consensus_14862#0 CCCAACATTTTTTTTTACCATGATGAGG--CAATACCCAGAAGCTAGATGACC-AGTCAA 279 consensus_14862#1 CCCAACATTTTTTTTTACCATGATGCAGGCCAATACCCAGAAGCTAGATGACCCAGTCCA 300 ************************* * *********************** **** * consensus_14862#0 AGA--AAGAG----ATGCC----ATATAGCACAAAACA----AAGAAATGTCATC-AGAA 324 consensus_14862#1 ACAGCAACAGCAGCATGCCCATCATTAGCCACAACACACCAAAGCAAATGTCATCCAGAA 360 * * ** ** ***** ** ***** *** * ********** **** consensus_14862#0 TTTA--TGCT-AAGGT-TGGGTTTTCT--TCTTCAGCAGA--CCACCAAATTTCTTC-AG 375 consensus_14862#1 TTTCATTGCTCAAGGTATGGGTTTTCTATCTTCCAGCAGCACCCACCAAATTTCTTCCAG 420 *** **** ***** ********** * ****** *************** ** consensus_14862#0 CAA--GGGCTTCTTCTTTTGC-GGCTGCT-GCTTGGGCGGTGATGCGTTGCCATTGCTCG 431 consensus_14862#1 CCACAGGGCTTCTTCTATTGTAGGCTGCTTGCTTGGGCGGTGATGCGTTGCCATTGCTCG 480 * * *********** *** ******* ****************************** consensus_14862#0 CCGTCGTGGAGTGCAAACCATT-GCCATCAACAATGGAATCTCCCGTGTTGGACTCTAAA 490 consensus_14862#1 CCGTCGTGGACTGCAAACCATNTGCCATCAACAATGGAATCTCCCGTGT-GGACTCTAAA 539 ********** ********** ************************** ********** consensus_14862#0 TCAACTTCTGATTCACCATCGTTTCCCTTCTCCTTAGATGAGGCATCATCAGTAACCTTG 550 consensus_14862#1 TCAA-TTCTGATTCACCATCGTTTCCCTTCTCCTTAGATGAGGCATCATCAGTAACTTGC 598 **** *************************************************** * consensus_14862#0 CTGTTCTCCCACATCTTTGCAACTACCATTACCGGTTCATCATCCTCGCTGCCCCCCTTG 610 consensus_14862#1 TGGTTCTCCCACATCTT-GGAACTACCATTAACGGTTCATCATCCTCGGTGTCCCCTT-- 655 *************** * *********** **************** ** **** * consensus_14862#0 ACATTACTTTCTTCCTTGTGACTACCATTTGTAGCTCCATCTTTTGCATTTGCAAGCACG 670 consensus_14862#1 ------------------------------------------------------------ consensus_14862#0 GAGAGCTCCTTTATCTTCTCAGAAGCAACAAGTTCCTTTGCTTGCAAATCATCGTTCTCT 730 consensus_14862#1 ------------------------------------------------------------ consensus_14862#0 TGTTTTATGTTCTGCAACTCATTTTCTTTGTCTAGTAGCTTTTCCTTCCACTGGAAGGTC 790 consensus_14862#1 ------------------------------------------------------------ consensus_14862#0 TCGGCCTTGGCTTCCTCGCATGTTTTGTTAGCTTCCATTAGCTGAGCTTCAAGATGCTTC 850 consensus_14862#1 ------------------------------------------------------------ consensus_14862#0 AACTTCTCCTGTAACTCAGCATTTTCACTTTCTTTGCCTTTTACAGCCTCCAAGGTCTTG 910 consensus_14862#1 ------------------------------------------------------------ consensus_14862#0 TCCATCTGAGCTCTGGCGTTGATGATTTCTTCTTCTGATTTTTTAATTGAGTTAACAAAA 970 consensus_14862#1 ------------------------------------------------------------ consensus_14862#0 CTTAGCTCTTTGGACTGCCATTCCTCAGACGCACTCTTGGTTTCTGCTTCCATTCTCTCA 1030 consensus_14862#1 ------------------------------------------------------------ consensus_14862#0 ACTGACTTCTTGAGACAAACTTTTTCATAGTTTGCTTCGTCAAGCATTACCTCATAGCTC 1090 consensus_14862#1 ------------------------------------------------------------ consensus_14862#0 TCCTTTGTATTCTGCAGACTTACATTGAGCTCCTCTACCTGTGCACGAGCACGATCAATC 1150 consensus_14862#1 ------------------------------------------------------------ consensus_14862#0 TCCTCTTGTTTATCTAGGTACTTCTCCTGCGCCACTCTCAGTTGAGCTGACATTTCGTGC 1210 consensus_14862#1 ------------------------------------------------------------ consensus_14862#0 AAAGCAGAGGCTTGACCCTCCATGGCCTTCTTAATCTTCTCAACTTCAGCTTTGCTAGCT 1270 consensus_14862#1 ------------------------------------------------------------ consensus_14862#0 TCAAGTTCCTTGGCTAGCATGTTCTTCTGTTCAATCAGGGTTTCCATTTCTGAACTGGCA 1330 consensus_14862#1 ------------------------------------------------------------ consensus_14862#0 ATCTTGTCATTGTTAAGGTCTTCTTCCGCCGCTTCGAGCTTCAACCTAAGGTCTTCTATC 1390 consensus_14862#1 ------------------------------------------------------------ consensus_14862#0 TCCAACCTTAATTCATCAGCTTCCTTATCAGCAGTATGAAAATCTTCTTTCTGCTTGGCT 1450 consensus_14862#1 ------------------------------------------------------------ consensus_14862#0 ACTTCATCCTCCAAAGACCTGACCTTATCCTGAAGTGCTTCGATTTCAGATTCTTTTTCT 1510 consensus_14862#1 ------------------------------------------------------------ consensus_14862#0 TGGAGCAGAGTCATTTTTGCATCCAATTCTTTCATTGCTGATTCTAAGGACTCGCCCTTG 1570 consensus_14862#1 ------------------------------------------------------------ consensus_14862#0 AGAATGTTAGACTGATCAGCTTCCTCCAACCTGACCTCCAATTCCAGTGCTTTTGTCTTC 1630 consensus_14862#1 ------------------------------------------------------------ consensus_14862#0 CATTTGCCAAGTAACTCCTCTGACCTCGCGCGCGCCTTCTTAACATCAGCGATTTCAACT 1690 consensus_14862#1 ------------------------------------------------------------ consensus_14862#0 TCAAGCTGTTCAACCACACCTTCCAATTCAACTGCCCTCTGCTCAGCGACATTTGCTTTC 1750 consensus_14862#1 ------------------------------------------------------------ consensus_14862#0 TCAAGCTCAAGCTTCAATCCAGAGTTCTCTTCTTCAAGCTTCCTAATGTGCTCCACAGCA 1810 consensus_14862#1 ------------------------------------------------------------ consensus_14862#0 CCTTTTGACGAGCTCCCTACCTCGGAATCAAGCAGCCCTTTGAGATGCGCCACCTCCGCA 1870 consensus_14862#1 ------------------------------------------------------------ consensus_14862#0 TTGAGGAGCTTGATCTTCTCGGCATTCTCATCTGAAGCCCTCATGGCATCAGGTGCCTGG 1930 consensus_14862#1 ------------------------------------------------------------ consensus_14862#0 GTAAGCGCCGCGTTCTTGGCATCGATTGCATCCGCTAGCTCATACCTGGCCTGCTCAAGC 1990 consensus_14862#1 ------------------------------------------------------------ consensus_14862#0 TGCTCCACCGTCGAACGCAGTGCGGCCATGTCAGCCTCCTGCTGGCTCTGCATGCTCGCC 2050 consensus_14862#1 ------------------------------------------------------------ consensus_14862#0 AGCTTCGTCCGCAGCTCGTCCTCCATGCTCGCGCTCGCCTGCTCCGCTTCGGCATCGCCG 2110 consensus_14862#1 ------------------------------------------------------------ consensus_14862#0 GACTGCTCCGCCGCCGACTCCTCCGCCGCCTTGCTCTGCGCAGCGAGCGCCTCCTGGAGC 2170 consensus_14862#1 ------------------------------------------------------------ consensus_14862#0 TTCGCATTGGCCTCATCAGCCGCCCTCTTGGCACGCTCCAGTTCATCCAGGACTTTCCCC 2230 consensus_14862#1 ------------------------------------------------------------ consensus_14862#0 CTCTCCTTCTCCTTCTCCACCAACTCCTCCTTGGCCTTCACGAGCTCCTGC 2281 consensus_14862#1 --------------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||