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Oryza sativa
cluster # 14895 cluster # 14895       Sequences # 18       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_14895#0 length = 625 sequences # 10  
consensus_14895#1 length = 573 sequences # 6  
consensus_14895#2 length = 362 sequences # 2  

consensusID : consensus_14895#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 625
fasta sequence
                              [TNAGCGCGCGTTAATACCGACTCCACTTATAGGNCGAATTGGGGTTACCGNGCCCCCCCCTCGAAGGTTCGACCCCACGCNTTCCGCGACNCGAAATCGATCGAGAGATTATT-GGCGAGTCGAGGAGAGTGCGCGAGAGAGATGGCGATGAGATCGGCGCTGACCTCACTCCCGTTGCGCCTCCGCTCCCCTGCTCCTGTGGCGGCGGCGTGCGGCGGGATGCGGCTGATGAGCGACGGCAAGGGGCGCGTGCTGAGCGAGGAGGAGCGGGCCAAGGAGAACGTCTACGTCCAGGTTTATTTGAAGATGGAGAGGGAGAGGATGGAGAAGCGCAAGAAGAAGCT-CGAGAAGGAGAAGGCGGAGGCAGAC-AAGGGCAATCCCGCCGCCTCCGACAAGAATAC-GGAGGGGGGATCCAACTAGGAGTGATGTGCTTCTGTCTGAAGACGGACTTGTTTCACATGCCTATGTTGGACACCGGTGTTCATACATGTCCTAGGATGAAAGAATAAATTCTGTAAAACATTTGACAGAGCTAGATTCATCTGCTCTGGTTTCCGGTGCTTGTTCATGATTGAATGAGGCTCTATTGTGTTGGACAAGTAAAAAAGTGTTCCCTTTCAAAAAA]

[+] EMBL AU031255             [TNAGCGCGCGTTAATACCGACTCCACTTATAGGNCGAATTGGGGTTACCGNGCCCCCCCCTCGAAGGTTCGACCCCACGCNTTCCGCGACNCGAAATCGATCGAGAGATTATTGGGCGAGTCGAGGAGAGTNCGCGAGAGAGATGGCGATGAGATCGGCGCTGACCTCACTCCCGTTGCGCCTCCGCTCCCCTGCTCCTGTGGCGGCGGCGTGCGNCGGGATGCGNCTGATGAGCGACGGCAAGGGGCGCGTGCTGAGCGAGGAGGAGCGGGCCAAGGAGAACGTCTACGTCCA         GAAGATGGAGAGGGAGAGGATGGAGAAGCGCAAGAAGAAGCT CGAGAAGGAGAAGGCGGAGGCAGAC AAGGGCAATCCCGCCGCCTCCGACAAGAATAC GGAGGGGGGATCCAACTAGGAGTGATGTGCTTCTGTCTGAAGACGGACTTGTTTCACATGCCTATGTTGGACACCGGTGTTCATACATGTCCTAGGATGAAAGAATAAATTCTGTAAAACATTTGACAGAGCTAGATTCATCTGCTCTGGTTTCCGGTGCTTGTTCATGATTGAATGAGGCTCTATTGTGTTGGACAAaaa                       ]
[+] EMBL AU057749             [                                                                                                   ATCGAGAGATTATT GGCGAGTCGAGGAGAGTGCGCGAGAGAGATGGCGATGAGATCGGCGCTGACCTCACTCCCGTTGCGCCTCCGCTCCCCTGCTCCTGTGGCGGCGGCGTGCGGCGGGATGCGGCTGATGAGCGACGGCAAGGGGCGCGTGCTGAGCGAGGAGGAGCGGGCCAAGGAGAACGTCTACGTCCAGGTTTATTTGAAGATGGAGAGGGAGAGGATGGAGAAGCGCAAGAAGAAGCT CGAGAAGGAGAAGGCGGAGGCAGAC AAGGGCAATCCCGCCGCCTCCGACAAGAATAC GGAGGGGGGATCCAACTAGGAGTGATGTGCTTCTGTCTGAAGACGGACTTGTTTCACATGCCTATGTTGGACACCGGTGTTCATACATGTCCTAGGATGAAAGAATAAATTCTGTAAAACATTTGACAGAGCTAGATTCATCTGCTCTGGTTTCCGGTGCTTGTTCATGATTGAATGAGGCTCTATTGTGTTGGACAAGTAA                      ]
[+] EMBL AU163825             [                                                                                                            TTATT GGCGAGTCGAGGAGAGTGCGCGAGAGAGATGCCGATGAGATCGGCGCTGACCTCACTCCCGTTGCGCCTCCGCTCCCCTGCTCCTGTGGCGGCGGCGTGCGGCGGGATGCGGCTGATGAGCGACGGCAAGGGGCGCGTGCTGAGCGAGGAGGAGCGGGCCAAGGAGAACGTCTACGTCCAGGTTTATTTGAAGATGGAGAGGGAGAGGATGGAGAAGCGCAAGAAGAAGCT CGAGAAGGAGAAGGCGGAGGCAGAC AAGGGCAATCCCGCCGCCTCCGACAAGAATAC GGAGGGGGGATCCAACTAGGAGTGATGTGCTTCTGTCTGAAGACGGACTTGTTTCACATGCCTATGTTGGACACCGGTGTTCATACATGTCCTAGGATGAAAGAATAAATTCTGTAAAACATTTGACAGAGCTAGATTCATCTGCTCTGGTTTCCGGTGCTTGTTCATGATTGAATGAGGCTCTAaaaa                                   ]
[+] EMBL OSC859               [                                                                                                             TATT GGCGAGTCGAGGAGAGTGCGCGAGAGAGATGGCGATGAGATCGGCGCTGACCTCACTCCCGTTGCGCCTCCGCTCCCCTGCTCCTGTGGCGGCGGCGTGCGGCGGGATGCGGCTGATGAGCGACGGCAAGGGGCGCGTGCTGAGCGAGGAGGAGCGGGCCAAGGAGAACGTCTACGTCCAGGTTTATTTGAAGATGGAGAGGGAGAGGATGGAGAAGCG AAGAAGAAGCTNCGAGAAGGAGAAGGCGGAGGCAAACAAAGGGAATTCCCGCCGCTTCCNCAAAGGATACGGGAGGGGGG TCC                                                                                                                                                                                                                   ]
[+] EMBL C98260               [                                                                                                      acgcntgttTT GGCGAGTCGAGGAGAGTGCGCGAGAGAGATGGCGATGAGATCGGCGCTGACCTCACTCCCGTTGCGCCTCCGCTCCCCTGCTCCTGTGGCGGCGGCGTGCGGCGGGATGCGGCTGATGAGCGACGGCAAGGGGCGCGTGCTGAGCGAGGAGGAGCGGGCCAAGGAGAACGTCTACGTCCAGGTTTATTTGAAGATGGAGAGGGAGAGGATGGAGAAGCGCAAGAAGAAGCT CGAGAAGGAGAAGGCGGAGGCAGAC AAGGGCAATCCCGCCGCCTCCGACAAGAATAC GGAGGGGGGATCCAACTAGGAGTGATGTGCTTCTGTCTGAAGACGGACTTGTTTCACATGCCTATGTTGGACACCGGTGTTCATACATGTCCTAGGATGAAAGAATAAATTCTGTAAAACATTTGACAGAGCTAGATTCATCTGCTCTGGTTTCCGGTGCTTGTTCATGATTGAATGAGGCTCTATTGTGTTGGACAAGTAAAAAA                  ]
[+] EMBL OS1346A              [                                                                                                             tntngnGCGAGTCGAGGAGAGTGCGCGAGAGAGATGGCGATGAGATCGGCGCTGACCTCACTCCCGTTGCGCCTCCGCTCCCCTGCTCCTGTGGCGGCGGCGTGCGGCGGGATGCGGCTGATGAGCGACGGCAAGGGGCGCGTGCTGAGCGAGGAGGAGCGGGCCAAGGAGAACGTCTACGTCCAGGTTTATTTGAAGATGGAGAGGGAGAGGATGGAGAAGCGCAAGAAGAAGCT CGAGAAGGAGAAGGCGGAGGCAGAC AAGGGCAATCCCGCCGCCTCCGACAAGAATAC GGAGGGGGGATCCAACTAGGAGTGATGTGCTTCTGTCTGAAGACGGACTTGTTTCACATGCCTATGTTGGACACCGGTGTTCATACATGTCCTA                                                                                                                                  ]
[+] EMBL AU164843             [                                                                                                                   GCGAGTCGAGGAGAGTGCGCGAGAGAGATGGCGATGAGATCGGCGCTGACCTCACTCCCGTTGCGCCTCCGCTCCCCTGCTCCTGTGGCGGCGGCGTGCGGCGGGATGCGGCTGATGAGCGACGGCAAGGGGCGCGTGCTGAGCGAGGAGGAGCGGGCCAAGGAGAACGTCTACGTCCA         GAAGATGGAGAGGGAGAGGATGGAGAAGCGCAAGAAGAAGCT CGAGAAGGAGAAGGCGGAGGCAGAC AAGGGCAATCCCGCCGCCTCCGACAAGAATAC GGAGGGGGGATCCAACTAGGAGTGATGTGCTTCTGTCTGAAGACGGACTTGTTTCACATGCCTATGTTGGACACCGGTGTTCATACATGTCCTAGGATGAAAGAATAAATTCTGTAAAACATTTGACAGAGCTAGATTCATCTGCTCTGGTTTCCGGTGCTTGTTCATGATTGAATGAGGCTCTATTGTGTTGGACAAGTATATCTGTGTTCCCTTTCAAAAAA]
[+] EMBL AB029059             [                                                                                                                                 GTGCGCGAGAGAGATGGCGATGAGATCGGCGCTGACCTCACTCCCGTTGCGCCTCCGCTCCCCTGCTCCTGTGGCGGCGGCGTGCGGCGGGATGCGGCTGATGAGCGACGGCAAGGGGCGCGTGCTGAGCGAGGAGGAGCGGGCCAAGGAGAACGTCTACGTCCAGGTTTATTTGAAGATGGAGAGGGAGAGGATGGAGAAGCGCAAGAAGAAGCT CGAGAAGGAGAAGGCGGAGGCAGAC AAGGGCAATCCCGCCGCCTCCGACAAGAATAC GGAGGGGGGATCCAACTAGGAGTGATGTGCTTCTGTCTGAAGACGGACTTGTTTCACATGCCTATGTTGGACACCGGTGTTCATACATGTCCTAGGATGAAAGAATAAATTCTGTAAAACATTTGACAGAGCTAGATTCATCTGCTCTGGTTTCCGGTGCTTGTTCATGATTGAATGAGGCTCTATTGTGTTGGACAAGTAAAAAA                  ]
[+] EMBL AU096980             [                                                                                                                                                                                                                                                                                              acCGTCCAGGTTTATTTGAAGATGGAGAGGGAGAGGATGGAGAAGCGCAAGAAGAAGCT CGAGAAGGAGAAGGCGGAGGCAGAC AAGGGCAATCCCGCCGCCTCCGACAAGAATAC GGAGGGGGGATCCAACTAGGAGTGATGTGCTTCTGTCTGAAGACGGACTTGTTTCACATGCCTATGTTGGACACCGGTGTTCATACATGTCCTAGGATGAAAGAATAAATTCTGTAAAACATTTGACAGAGCTAGATTCATCTGCTCTGGTTTCCGGTGCTTGTTCATGATTGAATGAGGCTCTATTGTGTTGGACAA  AAAA                    ]
[+] EMBL OSC23471             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TAGGATGAAAGAATAAATTCTGTAAAACATTTGACAGAGCTAGATTCATCTGCTCTGGTTTCCGGTGCTTGTTCATGATTGAATGAGGCTCTATTGTGTTGGACAAGTAAAAAAaa                ]


>consensus_14895#0 TNAGCGCGCGTTAATACCGACTCCACTTATAGGNCGAATTGGGGTTACCGNGCCCCCCCC TCGAAGGTTCGACCCCACGCNTTCCGCGACNCGAAATCGATCGAGAGATTATTGGCGAGT CGAGGAGAGTGCGCGAGAGAGATGGCGATGAGATCGGCGCTGACCTCACTCCCGTTGCGC CTCCGCTCCCCTGCTCCTGTGGCGGCGGCGTGCGGCGGGATGCGGCTGATGAGCGACGGC AAGGGGCGCGTGCTGAGCGAGGAGGAGCGGGCCAAGGAGAACGTCTACGTCCAGGTTTAT TTGAAGATGGAGAGGGAGAGGATGGAGAAGCGCAAGAAGAAGCTCGAGAAGGAGAAGGCG GAGGCAGACAAGGGCAATCCCGCCGCCTCCGACAAGAATACGGAGGGGGGATCCAACTAG GAGTGATGTGCTTCTGTCTGAAGACGGACTTGTTTCACATGCCTATGTTGGACACCGGTG TTCATACATGTCCTAGGATGAAAGAATAAATTCTGTAAAACATTTGACAGAGCTAGATTC ATCTGCTCTGGTTTCCGGTGCTTGTTCATGATTGAATGAGGCTCTATTGTGTTGGACAAG TAAAAAAGTGTTCCCTTTCAAAAAA



consensusID : consensus_14895#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 573
fasta sequence
                              [TTGCAGCCCACAAAAAGGCGGAGGAGACCCGGAGACTGTGGAGACGCGACGCGAAATCGATCGAGAGATTATTGGCGAGTCGAGGAGAGTGCGCGAGAGAGATGGCGATGAGATCGGCGCTGACCTCACTCCCGTTGCGCCTCCGCTCCCCTGCTCCTGTGGCGGCGGCGTGCGGCGGGATGCGGCTGATGAGCGACGGCAAGGGGCGCGTGCTGAGCGAGGAGGAGCGGGCCAAGGAGAA--CG-TCTACGT-CCAGAA--GA-TGG-AGAGGG--AG-AGGATGG-AG-AAG-CG-CAAGAAGAAGCTCGAG-AA-GGAGAAGGCGGAGG-CAGACAAGGGCAATCCCGCCGCCTCCGACAAGAATACGGAGGGGGGATCCAACTAGGAGTGATGTGCTTCTGTCTGAAGACGGACTTGTTTCACATGCCTATGTTGGACACCGGTGTTCATACATGTCCTAGGATGAAAGAATAAATTCTGTAAAACATTTGACAGAGCTAGATTCATCTGCTCTGGTTTCCGGTGCTTGTTCATGATTGAATGAGGCTCTATTGTGTTGGACAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK060402             [TTGCAGCCCACAAAAAGGCGGAGGAGACCCGGAGACTGTGGAGACGCGACGCGAAATCGATCGAGAGATTATTGGCGAGTCGAGGAGAGTGCGCGAGAGAGATGGCGATGAGATCGGCGCTGACCTCACTCCCGTTGCGCCTCCGCTCCCCTGCTCCTGTGGCGGCGGCGTGCGGCGGGATGCGGCTGATGAGCGACGGCAAGGGGCGCGTGCTGAGCGAGGAGGAGCGGGCCAAGGAGAA  CG TCTACGT CCAGAA  GA TGG AGAGGG  AG AGGATGG AG AAG CG CAAGAAGAAGCTCGAG AA GGAGAAGGCGGAGG CAGACAAGGGCAATCCCGCCGCCTCCGACAAGAATACGGAGGGGGGATCCAACTAGGAGTGATGTGCTTCTGTCTGAAGACGGACTTGTTTCACATGCCTATGTTGGACACCGGTGTTCATACATGTCCTAGGATGAAAGAATAAATTCTGTAAAACATTTGACAGAGCTAGATTCATCTGCTCTGGTTTCCGGTGCTTGTTCATGATTGAATGAGGCTCTATTGTG                               ]
[+] EMBL AK099200             [                                              CGACGCGAAATCGATCGAGAGATTATTGGCGAGTCGAGGAGAGTGCGCGAGAGAGATGGCGATGAGATCGGCGCTGACCTCACTCCCGTTGCGCCTCCGCTCCCCTGCTCCTGTGGCGGCGGCGTGCGGCGGGATGCGGCTGATGAGCGACGGCAAGGGGCGCGTGCTGAGCGAGGAGGAGCGGGCCAAGGAGAA  CG TCTACGT CCAGAA  GA TGG AGAGGG  AG AGGATGG AG AAG CG CAAGAAGAAGCTCGAG AA GGAGAAGGCGGAGG CAGACAAGGGCAATCCCGCCGCCTCCGACAAGAATACGGAGGGGGGATCCAACTAGGAGTGATGTGCTTCTGTCTGAAGACGGACTTGTTTCACATGCCTATGTTGGACACCGGTGTTCATACATGTCCTAGGATGAAAGAATAAATTCTGTAAAACATTTGACAGAGCTAGATTCATCTGCTCTGGTTTCCGGTGCTTGTTCATGATTGAATGAGGCTCT                                     ]
[+] EMBL AU066149             [                                                       ATCGATCGANAGATTATTGGCGAGTCGAGGAGAGTNCGCGANANANATGGCGATGAGATCGGCGCTGACCTCACTCCCGTTGCGCCTCCGCTCCCCTGCTCCTGTGGCGGCGGCGTGCGGCGGGATGCGGCTGATGAGCGACGGCAAGGGGCGCGTGCTGAGCGAGGAGGAGCGGGCCAAGGAGAA  CG TCTACGT CCAGAA  GA TGG AGAGGG  AG AGGATGG AG AAG CG CAAGAAGAAGCTCGAG AA GGAGAAGGCGGAGG CAGACAAGGGCAATCCCGCCGCCTCCGACAAGAATACGGAGGGGGGATCCAACTAGGAGTTATGTTCTTCTGTCTNAAGACGGACTTGTTTCACATGCCTATGTTTGACACCGGTGTTCATACATGTCCTAGGAT NAAG ATAAATTCTGT AAACATTTTACAGA CTAGA TCATCTGCTCTGGNTTCCGGTGCTT NTCATGATTTAAT ANGCTCTATTGTTTTGccagtaaa                    ]
[+] EMBL CF326417             [                                                                     gaggGGCGAGTCGAGGAGAGTGCGCGAGAGAGATGGCGATGAGATCGGCGCTGACCTCACTCCCGTTGCGCCTCCGCTCCCCTGCTCCTGTGGCGGCGGC                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CA759958             [                                                                            GAGACAAGGAGAGTGCGCGAGAGAGATGGCGATGAGATCGGCGCTGACCTCACTCCCGTTGCGCCTCCGCTCCCCTGCTCCTGTGGAGGCGGCGTGCGGCGGGATGCGGCTGATGAGCGACGGCAAGGGGCGCGTGCTGAGCGAGGAGGAGCGGGCCAAGGAGAA  CG TCTACGT CCAGAA  GA TGG AGAGGG  AG CGGATGG AG AAG CG CAAGAAGAAGCTCGAG AA GGAGAAGGCGGAGG CAGACAAGGGCAATCCCGCCGCCTCCGACAAGAATACGGAGGGGGGATCCAACTAGGAGTGATGTGCTTCTGTCTGAAGACGGACTTGTTTCACATGCCTATGTTGGACACCGGTGTTCATACATGTCCTAGGATGAAAGAATAAATTCTGTAAAACATTTGACAGAGCTAGATTCATCTGCTCTGGTTTCCGGTGCTTGTTCATGATTGAATGAGGCTCTATTGTGTTGGACAAGTAAAAAAAAAAAA         ]
[+] EMBL AU030039             [                                                                                                                                                                                                                                     gcCCAAGGAGAAACCGTTCTACGTCCCAGAAAGGATTGGAAGAGGGGAAGNGGGATGGAAGAAAGCCGCCAAGAAGAAGCTCGNGTAAGGGAGAAGGCGGAGGCCAGACAAGGGCAATCCCGCCGCCTCCGACAAGAATACGGAGGGGGGATCCAACTAGGAGTGATGTGCTTCTGTCTGAAGACGGACTTGTTTCACATGCCTATGTTGGACNCCGGTGTTCATACATGTCCTAGGATGAAAGAATAAATTCTGTAAAACATTTGACAGAGCTAGATTCATCTGCTCTGGTTTCCGGTGCTTGTTCATGATTGAATGAGGCTCTATTGTNTTGGNCAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_14895#1 TTGCAGCCCACAAAAAGGCGGAGGAGACCCGGAGACTGTGGAGACGCGACGCGAAATCGA TCGAGAGATTATTGGCGAGTCGAGGAGAGTGCGCGAGAGAGATGGCGATGAGATCGGCGC TGACCTCACTCCCGTTGCGCCTCCGCTCCCCTGCTCCTGTGGCGGCGGCGTGCGGCGGGA TGCGGCTGATGAGCGACGGCAAGGGGCGCGTGCTGAGCGAGGAGGAGCGGGCCAAGGAGA ACGTCTACGTCCAGAAGATGGAGAGGGAGAGGATGGAGAAGCGCAAGAAGAAGCTCGAGA AGGAGAAGGCGGAGGCAGACAAGGGCAATCCCGCCGCCTCCGACAAGAATACGGAGGGGG GATCCAACTAGGAGTGATGTGCTTCTGTCTGAAGACGGACTTGTTTCACATGCCTATGTT GGACACCGGTGTTCATACATGTCCTAGGATGAAAGAATAAATTCTGTAAAACATTTGACA GAGCTAGATTCATCTGCTCTGGTTTCCGGTGCTTGTTCATGATTGAATGAGGCTCTATTG TGTTGGACAAAAAAAAAAAAAAAAAAAAAAAAA



consensusID : consensus_14895#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 362
fasta sequence
                              [TAGAACTAGTTCTAGATCGAGAGATTATTGGCGAGTCGAGGAGAGTNCGCGAGAGAGATGGCGATGAGATCGGCGCTGACCTCACTCCCGTTGCGCCTCCGNTCCCCTGCTCCTGTGGCGGCGGCGTGCGGCGGGATGCGGCTGATGAGCGACGGCAAGGGGCGCGTNCTGAGCGAGGAGGAGCGGGCCAAGGAGAACGTCTACGTCCAGGTTTATTTGAAGATGGAGAGGGAGAGGATGGAGAAGCGCAAGAAGAAGCTCGAGAAGGGAGAAGTCGGAAGCAGACAAAGGGCATTCCCGCCGCTTCCGACAAGATACCGANGGGGGATTCCACTTAGGNTTATTTCTTTTTTCTTTAAACG]

[+] EMBL AU066025             [TAGAACTAGTTCTAGATCGAGAGATTATTGGCGAGTCGAGGAGAGTNCGCGAGAGAGATGGCGATGAGATCGGCGCTGACCTCACTCCCGTTGCGCCTCCGNTCCCCTGCTCCTGTGGCGGCGGCGTGCGGCGGGATGCGGCTGATGAGCGACGGCAAGGGGCGCGTNCTGAGCGAGGAGGAGCGGGCCAAGGAGAACGTCTACGTCCAGGTTTATTTGAAGATGGAGAGGGAGAGGATGGAGAAGCGCAAGAAGAAGCTCGAGAAGGGAGAAGTCGGA                                                                                   ]
[+] EMBL AU030038             [                TCGAGAGATTATTGGCGAGTCGAGGAGAGTGCGCGAGAGAGATGGCGATGAGATCGGCGCTGACCTCACTCCCGTTGCGCCTCCGCTCCCCTGCTCCTGTGGCGGCGGCGTGCGGCGGGATGCGGCTGATGAGCGACGGCAAGGGGCGCGTGCTGAGCGAGGAGGAGCGGGCCAAGGAGAACGTCTACGTCCA         GAAGATGGAGAGGGAGAGGATGGAGAAGCGCAAGAAGAAGCTCCAGAA GGAGAAGGCGGAAGCAGACAAAGGGCATTCCCGCCGCTTCCGACAAGATACCGANGGGGGATTCCACTTAGGNTTATTTCTTTTTTCTTTAAACG]


>consensus_14895#2 TAGAACTAGTTCTAGATCGAGAGATTATTGGCGAGTCGAGGAGAGTNCGCGAGAGAGATG GCGATGAGATCGGCGCTGACCTCACTCCCGTTGCGCCTCCGNTCCCCTGCTCCTGTGGCG GCGGCGTGCGGCGGGATGCGGCTGATGAGCGACGGCAAGGGGCGCGTNCTGAGCGAGGAG GAGCGGGCCAAGGAGAACGTCTACGTCCAGGTTTATTTGAAGATGGAGAGGGAGAGGATG GAGAAGCGCAAGAAGAAGCTCGAGAAGGGAGAAGTCGGAAGCAGACAAAGGGCATTCCCG CCGCTTCCGACAAGATACCGANGGGGGATTCCACTTAGGNTTATTTCTTTTTTCTTTAAA CG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14895#0      TNAGCGCGCGTTAATACCGACTCCACTTATAGGNCGAATTGGGGTTACCGNGCCCCCCCC 60
consensus_14895#2      ------------------------------------------------------------
consensus_14895#1      ----------------------------------------TTGCAGCCCACAAAAAGGCG 20
                                                                                   

consensus_14895#0      TCGAAGGTTCGACCCCACGCNTTCCGCGACNCGAAATCGATCGAGAGATTATTGGCGAGT 120
consensus_14895#2      ------------------------TAGAACTAGTTCTAGATCGAGAGATTATTGGCGAGT 36
consensus_14895#1      GAGGAGACCCGGAGACTGTGGAGACGCGACGCGAAATCGATCGAGAGATTATTGGCGAGT 80
                                                   **  *   * **********************

consensus_14895#0      CGAGGAGAGTGCGCGAGAGAGATGGCGATGAGATCGGCGCTGACCTCACTCCCGTTGCGC 180
consensus_14895#2      CGAGGAGAGTNCGCGAGAGAGATGGCGATGAGATCGGCGCTGACCTCACTCCCGTTGCGC 96
consensus_14895#1      CGAGGAGAGTGCGCGAGAGAGATGGCGATGAGATCGGCGCTGACCTCACTCCCGTTGCGC 140
                       ********** *************************************************

consensus_14895#0      CTCCGCTCCCCTGCTCCTGTGGCGGCGGCGTGCGGCGGGATGCGGCTGATGAGCGACGGC 240
consensus_14895#2      CTCCGNTCCCCTGCTCCTGTGGCGGCGGCGTGCGGCGGGATGCGGCTGATGAGCGACGGC 156
consensus_14895#1      CTCCGCTCCCCTGCTCCTGTGGCGGCGGCGTGCGGCGGGATGCGGCTGATGAGCGACGGC 200
                       ***** ******************************************************

consensus_14895#0      AAGGGGCGCGTGCTGAGCGAGGAGGAGCGGGCCAAGGAGAACGTCTACGTCCAGGTTTAT 300
consensus_14895#2      AAGGGGCGCGTNCTGAGCGAGGAGGAGCGGGCCAAGGAGAACGTCTACGTCCAGGTTTAT 216
consensus_14895#1      AAGGGGCGCGTGCTGAGCGAGGAGGAGCGGGCCAAGGAGAACGTCTACGTCCAG------ 254
                       *********** ******************************************      

consensus_14895#0      TTGAAGATGGAGAGGGAGAGGATGGAGAAGCGCAAGAAGAAGCTCGAGAAGG-AGAAGGC 359
consensus_14895#2      TTGAAGATGGAGAGGGAGAGGATGGAGAAGCGCAAGAAGAAGCTCGAGAAGGGAGAAGTC 276
consensus_14895#1      ---AAGATGGAGAGGGAGAGGATGGAGAAGCGCAAGAAGAAGCTCGAGAAGG-AGAAGGC 310
                          ************************************************* ***** *

consensus_14895#0      GGAGGCAGACAA-GGGCAATCCCGCCGCCTCCGACAAGAATACGGAGGGGGGATCCAACT 418
consensus_14895#2      GGAAGCAGACAAAGGGCATTCCCGCCGCTTCCGACAAGA-TACCGANGGGGGATTCCACT 335
consensus_14895#1      GGAGGCAGACAA-GGGCAATCCCGCCGCCTCCGACAAGAATACGGAGGGGGGATCCAACT 369
                       *** ******** ***** ********* ********** *** ** ******* * ***

consensus_14895#0      AGGAGTGATGTGCTTCTGTCTGAAGACGGACTTGTTTCACATGCCTATGTTGGACACCGG 478
consensus_14895#2      TAGGNTTATTT-CTTTTTTCTTTAAACG-------------------------------- 362
consensus_14895#1      AGGAGTGATGTGCTTCTGTCTGAAGACGGACTTGTTTCACATGCCTATGTTGGACACCGG 429
                         *  * ** * *** * ***  * ***                                

consensus_14895#0      TGTTCATACATGTCCTAGGATGAAAGAATAAATTCTGTAAAACATTTGACAGAGCTAGAT 538
consensus_14895#2      ------------------------------------------------------------
consensus_14895#1      TGTTCATACATGTCCTAGGATGAAAGAATAAATTCTGTAAAACATTTGACAGAGCTAGAT 489
                                                                                   

consensus_14895#0      TCATCTGCTCTGGTTTCCGGTGCTTGTTCATGATTGAATGAGGCTCTATTGTGTTGGACA 598
consensus_14895#2      ------------------------------------------------------------
consensus_14895#1      TCATCTGCTCTGGTTTCCGGTGCTTGTTCATGATTGAATGAGGCTCTATTGTGTTGGACA 549
                                                                                   

consensus_14895#0      AGTAAAAAAGTGTTCCCTTTCAAAAAA 625
consensus_14895#2      ---------------------------
consensus_14895#1      AAAAAAAAAAAAAAAAAAAAAAAA--- 573
                                                  




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)