These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14922#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 1908 fasta sequence [AGCAGTGTCTGTGTTTGGCACGTCCACGACAGCACGAGACG-GGTTGGGGACTTGGGGGGTTGAAGAAGCCAAGCTCTCCTTGGTTGGCGCGCACGTACGTTCGCTTCGCTTCGATTCGATGGCCACTGGTGACCCAAACCCTACCACCACTCCGCCGTCGCAGCAGCTGCAAGGAGCAGATCCCCAACCCCAATCCCAGCAGGATGCCGCCGCCAACGCCACTCCGGCGGCCGTGGCCGTGAGAGAGGATTATGTCCAGAACGCCGTCAAGTTCCTCTCCCACCCCAAGGTCAGGGGCTCCCCCGTCCTCTACCGCCGCTCCTTCCTAGAGAAGAAGGGCCTTACCAAGGACGAGATCGACGAGGCCTTCCGACGAGTCCCCGATCCGCAACCCAGCGCTACTGCTACTGCTGCTGCTTCCCCTTCGCCTTCACAGCACCCCAACAACCAGAACCACTCTTCTACCGTTGTGCAACCTTATGCACCAAGGCAACCAGCAACACCTGCTGGCTCTATTATTGTTGCCACACAGCCCAAGTTCAGCTGGTACCGTGCATTCGTCGCTGCAGGGCTATTGCTTGGTTTTGGAGTTAGTGCTGCTGTGTTTGTCAAGAAATTGCTCCTTCCTAGGCTTAAGTCTTGGATCCGCAAGGTCGTAGCTGAAGGTGATGAAAACGAGGGCAGGCAAATTAAGTCCAAGATCGATGAGGAAACTGCTGAAGCTGTAAAAGCTTCTGCATCTGCTGTTTCTGCTATTGCCAAAACTAACCAAGAATTGCTTGCTTCAAAGGATGAAGAAAAGAAGATACTTGTGACATTAACACAAGCACTAGATTCCCAAGCAAAAGAATTGAAATCCTTATGTGAGTCTCTGAACCATAGCAGGGATTCTATAAATATTACCAGGGAAGATAGGTTTTCTCAGTACCGGGCATTGGAAGAGCATGCCCCTTCTGCTGCAAGGAATGGGCCAGTTAACACTCCATGGAGAGCCTCTCAGCAAACTAATATGTATGGTGTGCCAAACAGTGATTTTGGCTCAGGGAGGCCTTCATTTGCGTCAACACATAATGAAGCTACACCTGGATCATTTTCAAGATCGTACGTTGAGACATCTGCTGCACACCGAGGGGATAATAGGTCTTCAGGGAGTAAGCCATGGGAGATGCAGCAATACTCACAGCAGAGGATTGGCTATGGATCCAACAGCCAGTTGAGTGATGACGGATGCCCTGAAACTCAGGACAACTATGGCGGGGGACCTTCGTATTCGTATCACCAGAATCAGAATCAGAACGGGAAGGCTCCGGCTCCGGATATTCAAGCAGAGGAGGCCAGGCCATCGGTATACATAAGTGGGGCTGAGGAAAGGTCGCCTCCGCCTCCGCCTCAGCGCCGCTGGGTTCCCCCGCAGCCTCCGGGCGTTGTGATGCCGGAAGCTGTGGCTGCCATCCGTCAACCAAAGTCCCTCGCAAAGCAACCGTCGAGCGAAGCTTCTCAAGAGGCAGCCGGCGAGACGCATGCCAACGGTGCTTCAAGTTCGTCG-CCTCTTCCTGAAGA-GGCGCTTGTTAATGGC-AGTGACGCCGGACGTAGTGAGATCGAAGA-ACAAGCA-GAAGCCATCTAGAAACAATTTGTTTTAAATTGGGACGAGATGATGTTGAGAAGCTGGAATATGTATTTATTTTGGATCAGTACGGGAACGCCTACTGTGGTAACAGAAGATCTCGATTTGTGGTCGAGTTTATACTACACTACGTCAAATAACAAGTGTTGCTACTAGCTGTGACTGTGAGTAATACCGATACATTACATTACATTACATACATACA-CGGTGATTAAAACAAACAAGCAGACATTTTTACTTGGTTATGTTATGACAGGCAGAGATGGCATATGTTAAGGAAGGAT] [+] EMBL AK062021 [AGCAGTGTCTGTGTTTGGCACGTCCACGACAGCACGAGACG GGTTGGGGACTTGGGGGGTTGAAGAAGCCAAGCTCTCCTTGGTTGGCGCGCACGTACGTTCGCTTCGCTTCGATTCGATGGCCACTGGTGACCCAAACCCTACCACCACTCCGCCGTCGCAGCAGCTGCAAGGAGCAGATCCCCAACCCCAATCCCAGCAGGATGCCGCCGCCAACGCCACTCCGGCGGCCGTGGCCGTGAGAGAGGATTATGTCCAGAACGCCGTCAAGTTCCTCTCCCACCCCAAGGTCAGGGGCTCCCCCGTCCTCTACCGCCGCTCCTTCCTAGAGAAGAAGGGCCTTACCAAGGACGAGATCGACGAGGCCTTCCGACGAGTCCCCGATCCGCAACCCAGCGCTACTGCTACTGCTGCTGCTTCCCCTTCGCCTTCACAGCACCCCAACAACCAGAACCACTCTTCTACCGTTGTGCAACCTTATGCACCAAGGCAACCAGCAACACCTGCTGGCTCTATTATTGTTGCCACACAGCCCAAGTTCAGCTGGTACCGTGCATTCGTCGCTGCAGGGCTATTGCTTGGTTTTGGAGTTAGTGCTGCTGTGTTTGTCAAGAAATTGCTCCTTCCTAGGCTTAAGTCTTGGATCCGCAAGGTCGTAGCTGAAGGTGATGAAAACGAGGGCAGGCAAATTAAGTCCAAGATCGATGAGGAAACTGCTGAAGCTGTAAAAGCTTCTGCATCTGCTGTTTCTGCTATTGCCAAAACTAACCAAGAATTGCTTGCTTCAAAGGATGAAGAAAAGAAGATACTTGTGACATTAACACAAGCACTAGATTCCCAAGCAAAAGAATTGAAATCCTTATGTGAGTCTCTGAACCATAGCAGGGATTCTATAAATATTACCAGGGAAGATAGGTTTTCTCAGTACCGGGCATTGGAAGAGCATGCCCCTTCTGCTGCAAGGAATGGGCCAGTTAACACTCCATGGAGAGCCTCTCAGCAAACTAATATGTATGGTGTGCCAAACAGTGATTTTGGCTCAGGGAGGCCTTCATTTGCGTCAACACATAATGAAGCTACACCTGGATCATTTTCAAGATCGTACGTTGAGACATCTGCTGCACACCGAGGGGATAATAGGTCTTCAGGGAGTAAGCCATGGGAGATGCAGCAATACTCACAGCAGAGGATTGGCTATGGATCCAACAGCCAGTTGAGTGATGACGGATGCCCTGAAACTCAGGACAACTATGGCGGGGGACCTTCGTATTCGTATCACCAGAATCAGAATCAGAACGGGAAGGCTCCGGCTCCGGATATTCAAGCAGAGGAGGCCAGGCCATCGGTATACATAAGTGGGGCTGAGGAAAGGTCGCCTCCGCCTCCGCCTCAGCGCCGCTGGGTTCCCCCGCAGCCTCCGGGCGTTGTGATGCCGGAAGCTGTGGCTGCCATCCGTCAACCAAAGTCCCTCGCAAAGCAACCGTCGAGCGAAGCTTCTCAAGAGGCAGCCGGCGAGACGCATGCCAACGGTGCTTCAAGTTCGTCG CCTCTTCCTGAAGA GGCGCTTGTTAATGGC AGTGACGCCGGACGTAGTGAGATCGAAGA ACAAGCA GAAGCCATCTAGAAACAATTTGTTTTAAATTGGGACGAGATGATGTTGAGAAGCTGGAATATGTATTTATTTTGGATCAGTACGGGAACGCCTACTGTGGTAACAGAAGATCTCGATTTGTGGTCGAGTTTATACTACACTACGTCAAATAACAAGTGTTGCTACTAGCTGTGACTGTGAGTAATACCGATACATTACATTACATTACATACATACA CGG ] [+] EMBL AK099093 [ TTGGCACGTCCACGACAGCACGAGACG GGTTGGGGACTTGGGGGGTTGAAGAAGCCAAGCTCTCCTTGGTTGGCGCGCACGTACGTTCGCTTCGCTTCGATTCGATGGCCACTGGTGACCCAAACCCTACCACCACTCCGCCGTCGCAGCAGCTGCAAGGAGCAGATCCCCAACCCCAATCCCAGCAGGATGCCGCCGCCAACGCCACTCCGGCGGCCGTGGCCGTGAGAGAGGATTATGTCCAGAACGCCGTCAAGTTCCTCTCCCACCCCAAGGTCAGGGGCTCCCCCGTCCTCTACCGCCGCTCCTTCCTAGAGAAGAAGGGCCTTACCAAGGACGAGATCGACGAGGCCTTCCGACGAGTCCCCGATCCGCAACCCAGCGCTACTGCTACTGCTGCTGCTTCCCCTTCGCCTTCACAGCACCCCAACAACCAGAACCACTCTTCTACCGTTGTGCAACCTTATGCACCAAGGCAACCAGCAACACCTGCTGGCTCTATTATTGTTGCCACACAGCCCAAGTTCAGCTGGTACCGTGCATTCGTCGCTGCAGGGCTATTGCTTGGTTTTGGAGTTAGTGCTGCTGTGTTTGTCAAGAAATTGCTCCTTCCTAGGCTTAAGTCTTGGATCCGCAAGGTCGTAGCTGAAGGTGATGAAAACGAGGGCAGGCAAATTAAGTCCAAGATCGATGAGGAAACTGCTGAAGCTGTAAAAGCTTCTGCATCTGCTGTTTCTGCTATTGCCAAAACTAACCAAGAATTGCTTGCTTCAAAGGATGAAGAAAAGAAGATACTTGTGACATTAACACAAGCACTAGATTCCCAAGCAAAAGAATTGAAATCCTTATGTGAGTCTCTGAACCGTAGCAGGGATTCTATAAATATTACCAGGGAAGATAGGTTTTCTCAGTACCGGGCATTGGAAGAGCATGCCCCTTCTGCTGCAAGGAATGGGCCAGTTAACACTCCATGGAGAGCCTCTCAGCAAACTAATATGTATGGTGTGCCAAACAGTGATTTTGGCTCAGGGAGGCCTTCATTTGCGTCAACACATAATGAAGCTACACCTGGATCATTTTCAAGATCGTACGTTGAGACATCTGCTGCACACCGAGGGGATAATAGGTCTTCAGGGAGTAAGCCATGGGAGATGCAGCAATACTCACAGCAGAGGATTGGCTATGGATCCAACAGCCAGTTGAGTGATGACGGATGCCCTGAAACTCAGGACAACTATGGCGGGGGACCTTCGTATTCGTATCACCAGAATCAGAATCAGAACGGGAAGGCTCCGGCTCCGGATATTCAAGCAGAGGAGGCCAGGCCATCGGTATACATAAGTGGGGCTGAGGAAAGGTCGCCTCCGCCTCCGCCTCAGCGCCGCTGGGTTCCCCCGCAGCCTCCGGGCGTTGTGATGCCGGAAGCTGTGGCTGCCATCCGTCAACCAAAGTCCCTCGCAAAGCAACCGTCGAGCGAAGCTTCTCAAGAGGCAGCCGGCGAGACGCATGCCAACGGTGCTTCAAGTTCGTCG CCTCTTCCTGAAGA GGCGCTTGTTAATGGC AGTGCCGCCGGACGTAGTGAGATCGAAGA ACAAGCA GAAGCCATCTAGAAACAATTTGTTTTAAATTGGGACGAGATGATGTTGAGAAGCTGGAATATGTATTTATTTTGGATCAGTACGGGAACGCCTACTGTGGTAACAGAAGATCTCGATTTGTGGTCGAGTTTATACTACACTACGTCAAATAACAAGTGTTGCTACTAGCTGTGACTGTGAGTAATACCGATACATTACATTACATTACATACATACA CGGTGATTAAAACAAACAAGCAGACATTTTTACTTGGTTATGTTATGACAGGCAGAGATGGCATATG ] [+] EMBL OSC107581 [ ACGACAGCACGAGACG GGTTGGGGACTTGGGGGGTTGAAGAAGCCAAGCTCTCCTTGGTTGGCGCGCACGTACGTTCGCTTCGCTTCGATTCGATGGCCACTGGTGACCCAAACCCTACCACCACTCCGCCGTCGCAGCAGCTGCAAGGAGCAGATCCCCAACCCCAATCCCAGCAGGATGCCGCCGCCAACGCCACTCCGGCGGCCGTGGCCGTNAGAGAGGATTATGTCCAGAACGCCGTCAAGTTCCTCTCCCACCCCAAGGTCAGGGGCTCCCCCGTCCTCTACCGCCGCTCCTTCCTAGAGAAGAAGGGCCTTACCAAGGACGAGATCGACGAGGCCTTCCGACGAGTTCCCGATCCG AAACCAGCGCTACTGCT ] [+] EMBL CB636063 [ AGCACGAGACG GGTTGGGGACTTGGGGGGTTGAAGAAGCCAAGCTCTCCTTGGTTGGCGCGCACGTACGTTCGCTTCGCTTCGATTCGATGGCCACTGGTGACCCAAACCCTACCACCACTCCGCCGTCGCAGCAGCTGCAAGGAGCAGATCCCCAACCCCAATCCCAGCAGGATGCCGCCGCCAACGCCACTCCGGCGGCCGTGGCCGTGAGAGAGGATTATGTCCAGAACGCCGTCAAGTTCCTCTCCCACCCCAAAGTCAGGGGCTCCCCCGTCCTCTACCGCCGCTCCTTCCTAGAGAAGAAGGGCCTTACCAAGGACGAGATCGACGAGGCCTTCCGACGAGTCCCCGATCCGCAACCCAGCGCTACTGCTACTGCTGCTGCTTCCCCTTCGCCTTCACAGCACCCCAACAACCAGAACCACTCTTCTACCGTTGTGCAACCTTATGCACCAAGGCAACCAGCAACACCTGCTGGCTCTATTATTGTTGCCACACAGCCCAAGTTCAGCTGGTACCGTGCATTCGTCGCTGCAAGGCTATTGCTTGGTTTTGGAGTTAGTGCTG ] [+] EMBL CB654122 [ AGCACGCTTTGAGGTTGGGGACTTGGGGGGTTGAAGAAGCCAAGCTCTCCTTGGTTGGCGCGCACGTACGTTCGCTTCGCTTCGATTCGATGGCCACTGGTGACCCAAACCCTACCACCACTCCGCCGTCGCAGCAGCTGCAAGGAGCAGATCCCCAACCCCAATCCCAGCAGGATGCCGCCGCCAACGCCACTCCGGCGGCCGTGGCCGTGAGAGAGGATTATGTCCAGAACGCCGTCAAGTTCCTCTCCCACCCCAAGGTCAGGGGCTCCCCCGTCCTCTACCGCCGCTCCTTCCTAGAGAAGAAGGGCCTTACCAAGGACGAGATCGACGAGGCCTTCCGACGAGTCCCCGATCCGCAACCCAGCGCTACTGCTACTGCTGCTGCTTCCCCTTCGCCTTCACAGCACCCCAACAACCAGAACCACTCTTCTACCGTTGTGCAACCTTATGCACCAAGGCAACCAGCAACACCTGCTGGCTCTATTATTGTTGCCACACAGCCCAAGTTCAGCTGGTACCGTGCATTCGTCGCTGCAGGGCTATTGCTTGGTTTTGGAGTTAGTGCTGCTGTGTTTGTCAAGAAATTGCTCCTTCCTAGGCTTAAGTCTTGGATCCGCAAGGTCGTAGCTGAAGGTGATGAAAACGAGGGCAGGCAAATTAAGTCCAAGATCGATGAGGAAACTGCTGAAGCTGTAAAAGCTTCTGCATCTGCTGTT ] [+] EMBL CF297633 [ CGCTTCGCTTCGATTCGATGGCCACTGGTGACCCAAACCCTACCACCACTCCGCCGTCGCAGCAGCTGCAAGGAGCAGATCCCCAACCCCAATCCCAGCAGGATGCCGCCGCCAACGCCACTCCGGCGGCCGTGGCCGTGAGAGAGGATTATGTCCAGAACGCCGTCAAGTTCCTCTCCCACCCCAAGGTCAGGGGCTCCCCCGTCCTCTACCGCCGCTCCTTCCTAGAGAAGAAGGGCCTTACCAAGGACGAGATCGACGAGGCCTTCCGACGAGTCCCCGATCCGCAACCCAGCGCTACTGCTACTGCTGCTGCTTCCCCTTCGCCTTCACAGCACCCCAACAACCAGAACCACTCTTCTACCGTTGTGCAACCTTATGCACCAAGGCAACCAGCAACACCTGCTGGCTCTATTATTGTTGCCACACAGCCCAAGTTCAGCTGGTACCGTGCATTCGTCGCTGCAGGGCTATTGCTTGGTTTTGGAGTTAGTGCTGCTGTGTTTGTCAAGAAATTGCTCCTTCCTAGGCTTAAGTCTTGGATCCGCAAG ] [+] EMBL CB619392 [ CTACCACCACTCCGCCGTCGCAGCAGCTGCAAGGAGCAGATCCCCAACCCCAATCCCAGCAGGATGCCGCCGCCAACGCCACTCCGGCGGCCGTGGCCGTGAGAGAGGATTATGTCCAGAACGCCGTCAAGTTCCTCTCCCACCCCAAGGTCAGGGGCTCCCCCGTCCTCTACCGCCGCTCCTTCCTAGAGAAGAAGGGCCTTACCAAGGACGAGATCGACGAGGCTTTCCGACGAGTCCCCGATCCGCAACCCAGCGCTACTGCTACTGCTGCTGCTTCCCCTTCGCCTTCACAGCACCCCAACAACCAGAACCACTCTTCTACCGTTGTGCAACCTTATGCACCAAGGCAACCAGCAACACCTGCTGGCTCTATCATTGTTGCCACACAGCCCAAGTTCAGCTGGTACCGTGCATTCGTCGCTGCAGGGCTATTGCTTGGTTTTGGAGTTAGTGCTGCTGTGTTTGTCAAGAAATTGCTCCTTCCTAGGCTTAAGTCTTGGATCCGCAAGGTCGTAGCTGAAGGTGATGAAAACGAGGGCAGGCAAATTAAGTCCAAGATTGATGAGGAAACTGCTGAAGCTGTAAAAGCTTCTGCATCTGCTGTTTCTGCTATTGCCAAAACTAACCAAGAATTGCTTGCTTCAAAGGATGAAGAAAAGAAGATACTTGTGACATTAACACAAGCACTAGATTCCCAAGCAAAAGAATTGAAATCCTTATGTGAGTCTCTGAACCATAGCAGGGATTCT ] [+] EMBL CB670830 [ ACCACCACTCCGCCGTCGCAGCAGCTGCA AGATCCCCAACCCCAATCCCAGCAGGATGCCGCCGCCAACGCCACTCCGGCGGCCGTGGCCGTGAGAGAGGATTATGTCCAGAACGCCGTCAAGTTCCTCTCCCACCCCAAGGTCAGGGGCTCCCCCGTCCTCTACCGCCGCTCCTTCCTAGAGAAGAAGGGCCTTACCAAGGACGAGATCGACGAGGCCTTCCGACGAGTCCCCGATCCGCAACCCAGCGCTACTGCTACTGCTGCTGCTTCCCCTTCGCCTTCACAGCACCCCAACAACCAGAACCACTCTTCTACCGTTGTGCAACCTTATGCACCAAGGCAACCAGCAACACCTGCTGGCTCTATTATTGTTGCCACACAGCCCAAGTTCAGCTGGTACCGTGCATTCGTCGCTGCAGGGCTATTGCTTGGTTTTGGAGTTAGTGCTGCTGTGTTTGTCAAGAAATTGCTCCTTCCTAGGCTTAAGTCTTGGATCCGCAAGGTCGTAGCTGAAGGTGATGAAAACGAGGGCAGGCAAATTAAGTCCAAGATCGATGAGGAAACTGCTGAAGCTGTAAAAGCTTCTGCATCTGCTGTTTCTGCTATTGCCAAAACTAACCAAGAATTGCTTGCTTCAAAGGATGAAGAAAAGAAGATACTTGTGACATTAACACAAGCACTAGATTCCCAAGCAAAAGAATTGAAATCCTTATGTGAGTCTCTGAACCATAGCAGGGATTCTATAAATATTACCAGGGAAGATAGGTTTTCTCAGTACCGGGCATTGGAAGAGCATGCCCCT ] [+] EMBL BF430623 [ AGTCCAAGATTGATGAGGAAACTGCTGAAGCTGTAAAAGCTTCTGCATCTGCTGTTTCTGCTATTGCCAAAACTAACCAAGAATTGCTTGCTTCAAAGGATGAAGAAAAGAAGATACTTGTGACATTAACACAAGCACTAGATTCCCAAGCAAAAGAATTGAAATCCTTATGTGAGTCTCTGAACCATAGCAGGGATTCTATAAATATTACCAGGGAAGATAGGTTTTCTCAGTACCGGGCATTGGAAGAGCATGCCCCTTCTGCTGCAAGGAATGGGCCAGTTAACACTCCATGGAGAGCCTCTCAGCAAACTAATATGTATGGTGTGCCAAACAGTGATTTTGGCTCAGGGAGGCCTTCATTTGCGTCAACACATAATGAAGCTACACCTGGATCATTTTCAAGATCGTACGTTGAGACATCTGCTGCACACCGAGGGGATAATAGGTCTTCAGGGAGTAAGCCATGGGAGATGCAGCAATACTCACAGCAGAGGATTGGCTACGGATCCAACAGCCAGTTGAGTGATGACGGATGCCCTGAAACTCAGGACAACTATGGCGGGGGACCTTCGTATTCGTATCACCAGAATCAGAATCAGAACGGGAAGGCTCCGGCTCCGGATATTCAAGCAGAGGAGGCCAGGCCATCGGTATACATAAGTGGGGCTGAGGAAAGGTCGGCT ] [-] EMBL CB670831 [ CAAGATCGTACGTTGAGACATCTGCTGCACACCGAGGGGATAATAGGTCTTCAGGGAGTAAGCCATGGGAGATGCAGCAATACTCACAGCAGAGGATTGGCTATGGATCCAACAGCCAGTTGAGTGATGACGGATGCCCTGAAACTCAGGACAACTATGGCGGGGGACCTTCGTATTCGTATCACCAGAATCAGAATCAGAACGGGAAGGCTCCGGCTCCGGATATTCAAGCAGAGGAGGCCAGGCCATCGGTATACATAAGTGGGGCTGAGGAAAGGTCGCCTCCGCCTCCGCCTCAGCGCCGCTGGGTTCCCCCGCAGCCTCCGGGCGTTGTGATGCCGGAAGCTGTGGCTGCCATCCGTCAACCAAAGTCCCTCGCAAAGCAACCGTCGAGCGAAGCTTCTCAAGAGGCAGCCGGCGAGACGCATGCCAACGGTGCTTCAAGTTCGTCG CCTCTTCCTGAAGA GGCGCTTGTTAATGGC AGTGACGCCGGACGTAGTGAGATCGAAGA ACAAGCA GAAGCCATCTAGAAACAATTTGTTTTAAATTGGGACGAGATGATGTTGAGAAGCTGGAATATGTATTTATTTTGGATCAGTACGGGAACGCCTACTGTGGTAACAGAAGATCTCGATTTGTGGTCGAGTTTATACTACACTACGTCAAATAACAAGTGTTGCTACTAGCTGTGACTGTGAGTAATACCGATACATTACATTACATTACATACATACA CGGTGATTAAAACAGACAAGCAGACATTTT ] [-] EMBL CB654123 [ CATCTGCTGCACACCGAGGGGATAATAGGTCTTCAGGGAGTAAGCCATGGGAGATGCAGCAATACTCACAGCAGAGGATTGGCTATGGATCCAACAGCCAGTTGAGTGATGACGGATGCCCTGAAACTCAGGACAACTATGGCGGGGGACCTTCGTATTCGTATCACCAGAATCAGAATCAGAACGGGAAGGCTCCGGCTCCGGATATTCAAGCAGAGGAGGCCAGGCCATCGGTATACATAAGTGGGGCTGAGGAAAGGTCGCCTCCGCCTCCGCCTCAGCGCCGCTGGGTTCCCCCGCAGCCTCCGGGCGTTGTGATGCCGGAAGCTGTGGCTGCCATCCGTCAACCAAAGTCCCTCGCAAAGCAACCGTCGAGCGAAGCTTCTCAAGAGGCAGCCGGCGAGACGCATGCCAACGGTGCTTCAAGTTCGTCG CCTCTTCCTGAAGA GGCGCTTGTTAATGGC AGTGACGCCGGACGTAGTGAGATCGAAGA ACAAGCA GAAGCCATCTAGAAACAATTTGTTTTAAATTGGGACGAGATGATGTTGAGAAGCTGGAATATGTATTTATTTTGGATCAGTACGGGAACGCCTACTGTGGTAACAGAAGATCTCGATTTGTGGTCGAGTTTATACTACACTACGTCAAATAACAAGTGTTGCTACTAGCTGTGACTGTGAGTAATACCGATACATTACATGACATTACATACATACACCGGT ] [-] EMBL CB619393 [ TCTTCAGGGAGTAAGCCATGGGAGATGCAGCAATACTCACAGCAGAGGATTGGCTACGGATCCAACAGCCAGTTGAGTGATGACGGATGCCCTGAAACTCAGGACAACTATGGCGGGGGACCTTCGTATTCGTATCACCAGAATCAGAATCAGAACGGGAAGGCTCCGGCTCCGGATATTCAAGCAGAGGAGGCCAGGCCATCGGTATACATAAGTGGGGCTGAGGAAAGGTCGCCTCCGCCTCCGCCTCAGCGCCGCTGGGTTCCCCCGCAGCCTCCGGGCGTTGTGATGCCGGAAGCTGTGGCTGCCATCCGTCAACCAAAGTCCCTCGCAAAGCAACCGTCGAGCGAAGCTTCTCAAGAGGCAGCCGGCGAGACGCATGCCAACGGTGCTTCAAGTTCGTCG CCTCTTCCTGAAGA GGCGCTTGTTAATGGC AGTGACGCCGGACGTAGTGAGATCGAAGA ACAAGCA GAAGCCATCTAGAAACAATTTGTTTTAAATTGGGACGAGATGATGTTGAGAAGCTGGAATATGTATTTATTTTGGATCAGTACGGGAACGCCTACTGTGGTAACAGAAGATCTCGATTTGTGGTCGAGTTTATACTACACTACGTCAAATAACAAGTGTTGCTACTAGCTGTGACTGTGAGTAATACCGATACATTACATTACATTACATACATACA CGGTGATTAAAACAAACAAGCAGACATTTTTACTT ] [-] EMBL CB636064 [ GCCATGGGAGATGCAGCAATACTCACAGCAGAGGATTGGCTATGGATCCAACAGCCAGTTGAGTGATGACGGATGCCCTGAAACTCAGGACAACTATGGCGGGGGACCTTCGTATTCGTATCACCAGAATCAGAATCAGAACGGGAAGGCTCCGGCTCCGGATATTCAAGCAGAGGAGGCCAGGCCATCGGTATACATAAGTGGGGCTGAGGAAAGGTCGCCTCCGCCTCCGCCTCAGCGCCGNTGGGTTCCCCCGCAGCCTCCGGGCGTTGTGATGCCGGAAGCTGTGGCTGCCATCCGTCAACCAAAGTCCCTCGCAAAGCAACCGTCGAGCGAAGCTTCTCAAGAGGCAGCCGGCGAGACGCATGCCAACGGTGCTTCAAGTTCGTCG CCTCTTCCTGAAGA GGCGCTTGTTAATGGC AGTGACGCCGGACGTAGTGAGATCGAAGA ACAAGCA GAAGCCATCTAGAAACAATTTGTTTTAAATTGGGACGAGATGATGTTGAGAAGCTGGAATATGTATTTATTTTGGATCAGTACGGGAACGCCTACTGTGGTAACAGAAGATCTCGATTTGTGGTCGAGTTTATACTACACTACGTCAAATAACAAGT ] [-] EMBL CF297632 [ TGACGGATGCCCTGAAACTCAGGACAACTATGGCGGGGGACCTTCGTATTCGTATCACCAGAATCAGAATCAGAACGGGAAGGCTCCGGCTCCGGATATTCAAGCAGAGGAGGCCAGGCCATCGGTATACATAAGTGGGGCTGAGGAAAGGTCGCCTCCGCCTCCGCCTCAGCGCCGCTGGGTTCCCCCGCAGCCTCCGGGCGTTGTGATGCCGGAAGCTGTGGCTGCCATCCGTCAACCAAAGTCCCTCGCAAAGCAACCGTCGAGCGAAGCTTCTCAAGAGGCAGCCGGCGAGACGCATGCCAACGGTGCTTCAAGTTCGTCG CCTCTTCCTGAAGA GGCGCTTGTTAATGGC AGTGGCGCCGGACGTAGTGAGATCGAAGA ACAAGCA GAAGCCATCTAGAAACAATTTGTTTTAAATTGGGACGAGATGATGTTGAGAAGCTGGAATATGTATTTATTTTGGATCAGTACGGGAACGCCTACTGTGGTAACAGAAGATCTCGATTTGTGGTCGAGTTTATACTACACTACGTCAAATAACAAGTGTTGCTACTAaaaaa ] [-] EMBL CB639700 [ CAGCGCCGTTGGGTTCCCCCGCAGCCTCCGGGCGTTGTGATGCCGGAAGCTGTGGTTGCCATCCGTCAACCAAAGTCCCTCGCAAAGCAACCGTCGAGCGAAGTTTCTCAAGAGGCAGCCGGCGAGACGCATGCCAACGGTGCTTCAAGTTCGTCG CCTCTTCCTGAAGA GGCGCTTGTTAATGGC AGTGACGCCGGACGTAGTGAGATCGAAGA ACAAGCA GAAGCCATCTAGAAACAATTTGTTTTAAATTGGGACGAGATGATGTTGAGAAGCTGGAATATGTATTTATTTTGGATCAGTACGGGAACGCCTACTGTGGTAACAGAAGATCTCGATTTGTGGTCGAGTTTATACTACACTACGTCAAATAACAAGTGTTGCTACTAGCTGTGACTGTGAGTAATACCGATACATTACATTACATTACATACATACA CGGTGATT ] [+] EMBL BI805199 [ tTTCGTCGCCCTCTTCCTGAAGAGGGCGCTTGTTAATGGCAAGTGACGCCGGACGTAGTGAGATCGAAGATACAAGCATGAAGCCATCTAGAAACCATTTGTTTTAAATTGGGACGAGATGATGTTGAGAAGCTGGAATATGTATTTATTTTGGATCAGTACGGGAACGCCTACTGTGGTAACAGAAGATCTCGATTTGTGGTCGAGTTTATACTAC CTACGTCAAATAAC AGTGTTGCTACTAGCTGTGACTGTGAGTAATACCGATAC TTAC TTACATTACATACATAC CGGTGATTAAAAC AAC AGCAGACATTTTTACTTGGTTATGTTATGACAGGCAGAGATGGCATATGTTAAGGAAGGAT] consensusID : consensus_14922#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 526 fasta sequence [CCCGTCGAAACACGNCCACTCNGCCCNGCAGNNAAACTCTCANTNGAGGATTGGCTACGGATCCAACANCCANTTGAGTGATGACNGATGCCCTNAAACTCNTGACAATTATGGCGGGGGACCTTCGTATTCGTATCACCAGAATCGTAATCAGAACGGGAANGCTCCGGCTCCGGATATTCAAGCAGAGGAGGCCAGTCCATCGGTATACATAAGTGGGGCTGANGAAAGGTCGCCTCCGCCTCCGCCTCAGCNCCGCTGGGTTCCCCCACAGCCTCCGGGCNTTGTGATGCCGGAAGCTGTGGCTGCCATCTTTTTTCCTNANTCCCTCGCAAAGCAACCGTCGAGCGAAGCTTCTCAAGAGGCAACNGGCNCAGACGCATGCCAACGGTGCTTCAAGTTCGTCGCCTCTTCCTGAAGAAGCCTTGTTAATGGCAGTGACGCCNGGACNTACTGAGATCNAAGAACAAGCTGAAGCCATCTAGAAACAATTTGTTTTAAATTGGGACGAGATGATGTTGAAAAC] [+] EMBL AA754504 [CCCGTCGAAACACGNCCACTCNGCCCNGCAGNNAAACTCTCANTNGAGGATTGGCTACGGATCCAACANCCANTTGAGTGATGACNGATGCCCTNAAACTCNTGACAATTATGGCGGGGGACCTTCGTATTCGTATCACCAGAATCGTAATCAGAACGGGAANGCTCCGGCTCCGGATATTCAAGCAGAGGAGGCCAGTCCATCGGTATACATAAGTGGGGCTGANGAAAGGTCGCCTCCGCCTCCGCCTCAGCNCCGCTGGGTTCCCCCACAGCCTCCGGGCNTTGTGATGCCGGAAGCTGTGGCTGCCATCTTTTTTCCTNANTCCCTCGCAAAGCAACCGTCGAGCGAAGCTTCTCAAGAGGCAACNGGCNCAGACGCATGCCAACGGTGCTTCAAGTTCGTCGCCTCTTCCTGAAGAAGCCTTGTTAATGGCAGTGACGCCNGGACNTACTGAGATCNAAGAACAAGCTGAAGCCATCTAGAAACAATTTGTTTTAAATTGGGACGAGATGATGTTGAAAAC] consensusID : consensus_14922#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 334 fasta sequence [GCGANACGCATGCCAACGGTGCTTCAAGTTCGTCGCCTCTTCCTGAAAAGGCGCTTGTTAATGGCAGTGACGCCGGACGTAGTGAGATCGAAGAACAAGCAGAAGCCATNTAGAAACAATTTGTTTTAAATTGGGACNANATGATGTTNANAAGCTGGAANATGTATTTATTTTGGATCAGTACGGGAACGCCTACTGTGGTAACANAANATCTCGATTTGTGGTCGAGTTTATACTACNCTACGTCAAATAACAAGTGTTGCTACTANCTGTGACTGTGAGTAATACCGATACATTNCATTCCATTAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AU166300 [GCGANACGCATGCCAACGGTGCTTCAAGTTCGTCGCCTCTTCCTGAAAAGGCGCTTGTTAATGGCAGTGACGCCGGACGTAGTGAGATCGAAGAACAAGCAGAAGCCATNTAGAAACAATTTGTTTTAAATTGGGACNANATGATGTTNANAAGCTGGAANATGTATTTATTTTGGATCAGTACGGGAACGCCTACTGTGGTAACANAANATCTCGATTTGTGGTCGAGTTTATACTACNCTACGTCAAATAACAAGTGTTGCTACTANCTGTGACTGTGAGTAATACCGATACATTNCATTCCATTAAAAAAAAAAAAAAAAAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14922#0 AGCAGTGTCTGTGTTTGGCACGTCCACGACAGCACGAGACGGGTTGGGGACTTGGGGGGT 60 consensus_14922#2 ------------------------------------------------------------ consensus_14922#1 ------------------------------------------------------------ consensus_14922#0 TGAAGAAGCCAAGCTCTCCTTGGTTGGCGCGCACGTACGTTCGCTTCGCTTCGATTCGAT 120 consensus_14922#2 ------------------------------------------------------------ consensus_14922#1 ------------------------------------------------------------ consensus_14922#0 GGCCACTGGTGACCCAAACCCTACCACCACTCCGCCGTCGCAGCAGCTGCAAGGAGCAGA 180 consensus_14922#2 ------------------------------------------------------------ consensus_14922#1 ------------------------------------------------------------ consensus_14922#0 TCCCCAACCCCAATCCCAGCAGGATGCCGCCGCCAACGCCACTCCGGCGGCCGTGGCCGT 240 consensus_14922#2 ------------------------------------------------------------ consensus_14922#1 ------------------------------------------------------------ consensus_14922#0 GAGAGAGGATTATGTCCAGAACGCCGTCAAGTTCCTCTCCCACCCCAAGGTCAGGGGCTC 300 consensus_14922#2 ------------------------------------------------------------ consensus_14922#1 ------------------------------------------------------------ consensus_14922#0 CCCCGTCCTCTACCGCCGCTCCTTCCTAGAGAAGAAGGGCCTTACCAAGGACGAGATCGA 360 consensus_14922#2 ------------------------------------------------------------ consensus_14922#1 ------------------------------------------------------------ consensus_14922#0 CGAGGCCTTCCGACGAGTCCCCGATCCGCAACCCAGCGCTACTGCTACTGCTGCTGCTTC 420 consensus_14922#2 ------------------------------------------------------------ consensus_14922#1 ------------------------------------------------------------ consensus_14922#0 CCCTTCGCCTTCACAGCACCCCAACAACCAGAACCACTCTTCTACCGTTGTGCAACCTTA 480 consensus_14922#2 ------------------------------------------------------------ consensus_14922#1 ------------------------------------------------------------ consensus_14922#0 TGCACCAAGGCAACCAGCAACACCTGCTGGCTCTATTATTGTTGCCACACAGCCCAAGTT 540 consensus_14922#2 ------------------------------------------------------------ consensus_14922#1 ------------------------------------------------------------ consensus_14922#0 CAGCTGGTACCGTGCATTCGTCGCTGCAGGGCTATTGCTTGGTTTTGGAGTTAGTGCTGC 600 consensus_14922#2 ------------------------------------------------------------ consensus_14922#1 ------------------------------------------------------------ consensus_14922#0 TGTGTTTGTCAAGAAATTGCTCCTTCCTAGGCTTAAGTCTTGGATCCGCAAGGTCGTAGC 660 consensus_14922#2 ------------------------------------------------------------ consensus_14922#1 ------------------------------------------------------------ consensus_14922#0 TGAAGGTGATGAAAACGAGGGCAGGCAAATTAAGTCCAAGATCGATGAGGAAACTGCTGA 720 consensus_14922#2 ------------------------------------------------------------ consensus_14922#1 ------------------------------------------------------------ consensus_14922#0 AGCTGTAAAAGCTTCTGCATCTGCTGTTTCTGCTATTGCCAAAACTAACCAAGAATTGCT 780 consensus_14922#2 ------------------------------------------------------------ consensus_14922#1 ------------------------------------------------------------ consensus_14922#0 TGCTTCAAAGGATGAAGAAAAGAAGATACTTGTGACATTAACACAAGCACTAGATTCCCA 840 consensus_14922#2 ------------------------------------------------------------ consensus_14922#1 ------------------------------------------------------------ consensus_14922#0 AGCAAAAGAATTGAAATCCTTATGTGAGTCTCTGAACCATAGCAGGGATTCTATAAATAT 900 consensus_14922#2 ------------------------------------------------------------ consensus_14922#1 ------------------------------------------------------------ consensus_14922#0 TACCAGGGAAGATAGGTTTTCTCAGTACCGGGCATTGGAAGAGCATGCCCCTTCTGCTGC 960 consensus_14922#2 ------------------------------------------------------------ consensus_14922#1 ------------------------------------------------------------ consensus_14922#0 AAGGAATGGGCCAGTTAACACTCCATGGAGAGCCTCTCAGCAAACTAATATGTATGGTGT 1020 consensus_14922#2 ------------------------------------------------------------ consensus_14922#1 ------------------------------------------------------------ consensus_14922#0 GCCAAACAGTGATTTTGGCTCAGGGAGGCCTTCATTTGCGTCAACACATAATGAAGCTAC 1080 consensus_14922#2 ------------------------------------------------------------ consensus_14922#1 ------------------------------------------------------------ consensus_14922#0 ACCTGGATCATTTTCAAGATCGTACGTTGAGACATCTGCTGCACACCGAGGGGATAATAG 1140 consensus_14922#2 ------------------------------------------------------------ consensus_14922#1 ------------------------------------------------------------ consensus_14922#0 GTCTTCAGGGAGTAAGCCATGGGAGATGCAGCAATACTCACAGCAGAGGATTGGCTATGG 1200 consensus_14922#2 ------------------------------------------------------------ consensus_14922#1 ------------------------------------------------------------ consensus_14922#0 ATCCAACAGCCAGTTGAGTGATGACGGATGCCCTGAAACTCAGGACAACTATGGCGGGGG 1260 consensus_14922#2 ------------------------------------------------------------ consensus_14922#1 ------------------------------------------------------------ consensus_14922#0 ACCTTCGTATTCGTATCACCAGAATCAGAATCAGAACGGGAAGGCTCCGGCTCCGGATAT 1320 consensus_14922#2 ------------------------------------------------------------ consensus_14922#1 ------------------------------------------------------------ consensus_14922#0 TCAAGCAGAGGAGGCCAGGCCATCGGTATACATAAGTGGGGCTGAGGAAAGGTCGCCTCC 1380 consensus_14922#2 ------------------------------------------------------------ consensus_14922#1 ------------------------------------------------------------ consensus_14922#0 GCCTCCGCCTCAGCGCCGCTGGGTTCCCCCGCAGCCTCCGGGCGTTGTGATGCCGGAAGC 1440 consensus_14922#2 ------------------------------------------------------------ consensus_14922#1 ------------------------------------------------------------ consensus_14922#0 TGTGGCTGCCATCCGTCAACCAAAGTCCCTCGCAAAGCAACCGTCGAGCGAAGCTTCTCA 1500 consensus_14922#2 ------------------------------------------------------------ consensus_14922#1 ------------------------------------------------------------ consensus_14922#0 AGAGGCAGCCGGCGAGACGCATGCCAACGGTGCTTCAAGTTCGTCGCCTCTTCCTGAAGA 1560 consensus_14922#2 -----------GCGANACGCATGCCAACGGTGCTTCAAGTTCGTCGCCTCTTCCTGAAAA 49 consensus_14922#1 -------CCCGTCGAAACACGNCCACTCNGCCCNGCAGNNAAACTCTCANTNGAGGATTG 53 *** ** * * * * * ** * * ** consensus_14922#0 GGCGCTTGTT-AATGGC------AGTGACGCCGGACGTAGTGAGA---TCGAAGAACAAG 1610 consensus_14922#2 GGCGCTTGTT-AATGGC------AGTGACGCCGGACGTAGTGAGA---TCGAAGAACAAG 99 consensus_14922#1 GCTACGGATCCAACANCCANTTGAGTGATGACNGATGCCCTNAAACTCNTGACAATTATG 113 * * * ** * ***** * * ** * * * * ** * * * consensus_14922#0 CAGAAGCCATCTAGAAACAATTTGTTTTAAATTGGGACGAGAT---GATGTTGAGAAGCT 1667 consensus_14922#2 CAGAAGCCATNTAGAAACAATTTGTTTTAAATTGGGACNANAT---GATGTTNANAAGCT 156 consensus_14922#1 GCGGGGGACCTTCGTATTCGTATCACCAGAATCGTAATCAGAACGGGAANGCTCCGGCTC 173 * * * * * * * *** * * * * ** consensus_14922#0 GGAATATGTATTTATTTTGGATCAGTACG--GGAACGCCTA--CTGTGGTAACAGAAGAT 1723 consensus_14922#2 GGAANATGTATTTATTTTGGATCAGTACG--GGAACGCCTA--CTGTGGTAACANAANAT 212 consensus_14922#1 CGGATATTCAAGCAGAGGAGGCCAGTCCATCGGTATACATAAGTGGGGCTGANGAAAGGT 233 * * ** * * * **** * ** * * ** * * * * ** * consensus_14922#0 C---TCGATTTGTGGTCGAGTTTATACTACACTACGTCAAA--TAACAAGTGTTGCTACT 1778 consensus_14922#2 C---TCGATTTGTGGTCGAGTTTATACTACNCTACGTCAAA--TAACAAGTGTTGCTACT 267 consensus_14922#1 CGCCTCCGCCTCCGCCTCAGCNC-CGCTGGGTTCCCCCACAGCCTCCGGGCNTTGTGA-T 291 * ** * * ** ** * * ** * * * *** * * consensus_14922#0 AGCTGTGACTGTGAGTAATACCGATACATTACATTACATTACATACATACACGGTGATTA 1838 consensus_14922#2 ANCTGTGACTGTGAGTAATACCGATACATTNCATTCCATTAAAAAAAAAAAAAAAAAAAA 327 consensus_14922#1 GCCGGAAGCTGTGGCTGCCATCTTTTTTCCTNANTCCCTCGCAAAGCAACCGTCGAGCGA 351 * * ***** * * * * * * * * * * * * consensus_14922#0 AA------ACAAACAAGCAGACATTTTTACTTGGTTATGTTATGACAGGCAGAGATGGCA 1892 consensus_14922#2 AA------AAAAA----------------------------------------------- 334 consensus_14922#1 AGCTTCTCAAGAGGCAACNGGCNCAGACGCATGCCAACGGTGCTTCAAGTTCGTCGCCTC 411 * * * consensus_14922#0 TATGTTAAGGAAGGAT-------------------------------------------- 1908 consensus_14922#2 ------------------------------------------------------------ consensus_14922#1 TTCCTGAAGAAGCCTTGTTAATGGCAGTGACGCCNGGACNTACTGAGATCNAAGAACAAG 471 consensus_14922#0 ------------------------------------------------------- consensus_14922#2 ------------------------------------------------------- consensus_14922#1 CTGAAGCCATCTAGAAACAATTTGTTTTAAATTGGGACGAGATGATGTTGAAAAC 526 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||