These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14942#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 838 fasta sequence [GCACTAGTAGTCTTCGTCTGAGAGAGAGAGAGAGAGAGGTTTGGGGGGTAGGTGTTGTT-GGGGGAGTCGTCGAGATGGAGAAAGAGGGC-GGAGTGAAGGCGGCGGCGGAGGC-GGAGGC-GGAGGC-GGAGGGGGAGATCGTGGCGGCGCCGGCGGAGAAGGTGGCGTGC-TTCAAG-AAGAC-GGCGGGGGAGGAGGCGG-ACGCGACGTT-CAT-GGAGC-GCGTC-AAGGACTA-CTATAACCAGC-TCAAGGAGAGCT-CCGCCGAG-AAGCACTGGATCTGCATCAAGGACAAGTTCCGCGCCGCCGGCGA-GT-ACGTCTCACAGAAGAGCAGCTCGGTGTTCGGCAAGAAGAAGGTCGAGCCCGTGGTCAAGGA-TGC-TGCAGTTCCAGGGG-AGGCGAGTTCGG-TGACAGT-CGAGTCTCAGTGA-GGGGGGGC-TAGCTTCTGATCAGTACCAACTTTGATGAGACAAGTGTAAATCCTCTTAGGTGCTCAACGGTGGAAC-TTGAATTGTGAGGTCTTATCGATCAGCGAGTAGTTTTTTTGCTATGTCATCTTGTT-CGTAGATTCTAGTAGGAAGAGTAGTTTGGACATGGTTGGCTGAGTGGTTACTACTGCTGTGATCTCCGGATGTTTCTACCTGAAAAAATATGTGAACCTTGAATCTGCTTGGTAGCATCTATGATCAATCTGCAGTGCAGCTGGTTAAATTC-GTGCCGCTGCTATTCTGATATAGACATATAGTTATATGAAAAATTGTGTTGAGCATGGGGATGATATACCCACTGGATTCATCTTGGTTTTCTGAATGCAAGGGTCAATTAGCACTGGTTCATTGTGAATGCAAAAAAAAAA] [+] EMBL AU182097 [GCACTAGTAGTCTTCGTCTGAGAGAGAGAGAGAGAGAGGTTTGGGGGGTAGGTGTTGTTGGGGGGAGTCGTCGAGATGGAGAAAGAGGGCGGGAGTGAAGGCGGCGGCGGAGGC GGAGGC GGAGGCGGGAGGGGGAGATCGTGGCGGCGCCGGCGGAGAANGTGGCGTGCTTTCAAG AAGACTGGCGGGGGAGGAGGCGG ACGCGACGTT CATGGGAGC GCGTCAAAGGACTA CTATAACCAGCTTCAAGGAGAGCT ] [+] EMBL AU182126 [ TAGTAGTCTTCGTCTGAGAGAGAGAGAGAGAGAGGTTTGGGGGGTAGGTGTTGTT GGGGGAGTCGTCGAGATGGAGAAAGAGGGC GGAGTGAAGGCGGCGGCGGAGGCNGGAGGCNGGAGGC GGAGGGGGAGATCGTGGCGGCGCCGGCGGAGAAGGTGGCGTGC TTCAAG AAGAC GGCGGGGGAGGAGGCGG ACGCGACGTT CAT GGAGC GCGTC AAGGACTA CTATAACCAGC TCAAGGAGAGCT CCGCCGAG AAGCACTGGATCTGCATCAAGGACAAGTTCCGCGCCGCCGGCGA GT ACGTCTCACAGAAGAGCAGCTCGGTGTTCGGCAAGAAGAAGGTCGAGCCCGTGGTCAAGGA TGC TGCAGTTCCAGGGG AGGCGAGTTCGG TGACAGT CGAGTCTCAGTGA GGGGGGGC TAGCTTCTG ] [+] EMBL AU077549 [ GTAGTCTTCGTCTGANAGAGAGAGAGAGAGAGGTTTGGGGGGTAGGTGTTGTT GGGGGAGTCGTCGAGATGGAGAAAGAGGGC GGAGTGAAGGCGGCGGCGGAGGC GGAGGC GGAGGC GGAGGGGGAGATCGTGGCGGCGCCGGCGGAGAAGGTGGCGTGC TTCAAG AAGAC GGCGGGGGAGGAGGCGG ACGCNACGTT CAT GGAGC GCGTC AAGGACTA CTATAACCAGC TCAAGGAGANCT CCGCCGAG AAGCACTGGATCTGCATCAAGGACAAGTTCCGTGCCGNC GAGACGTAACGTCTCACAGANGAGCAGCTCNGTGTTCGGCAAGANGAAGGTCGAGCCCGTGGTCAAGGA TGC TNCAGTTCCAGGGGAAGGCGAGTTCGG TTACAGTCCAAGTCTCAATTAGGGGGGGGC TAGCTTCTNATCAGTACCAATTT ] [+] EMBL AU069559 [ GTAGTCTTCGTCTGAGAGAGAGAGAGAGAGAGGTTTGGGGGGTAGGTGTTGTT GGGGGAGTCGTCGAGATGGAGAAAGAGGGC GGAGTGAAGGCGGCGGCGGAGGC GGAGGC GGAGGC GGAGGGGGAGATCGTGGCGGCGCCGGCGGAGAAGGTGGCGTGC TTCAAG AAGAC GGCGGGGGAGGAGGCGG ACGCGACGTT CAT GGAGC GCGTC AAGGACTA CTATAACCAGC TCAAGGAGAGCT CCGCCGAG AAGCACTGGATCTGCATCAAGGACAAGTTCCGCGCCG CGGCGA GT ACGTCTCACAGAAGAGCAGCTCGGTGTTCGGCAAGAAGAAGGTCGAGCCCGTGGTCAAGGA TGC TGCAGTTCCAGGGG AGGCGAGTTCGG TGACAGT CGAGTCTCAG ] [+] EMBL AK063718 [ C GGAGTGAAGGCGGCGGCGGAGGC GGAGGC GGAGGC GGAGGGGGAGATCGTGGCGGCGCCGGCGGAGAAGGTGGCGTGC TTCAAG AAGAC GGCGGGGGAGGAGGCGG ACGCGACGTT CAT GGAGC GCGTC AAGGACTA CTATAACCAGC TCAAGGAGAGCT CCGCCGAG AAGCACTGGATCTGCATCAAGGACAAGTTCCGCGCCGCCGGCGA GT ACGTCTCACAGAAGAGCAGCTCGGTGTTCGGCAAGAAGAAGGTCGAGCCCGTGGTCAAGGA TGC TGCAGTTCCAGGGG AGGCGAGTTCGG TGACAGT CGAGTCTCAGTGA GGGGGGGC TAGCTTCTGATCAGTACCAACTTTGATGAGACAAGTGTAAATCCTCTTAGGTGCTCAACGGTGGAAC TTGAATTGTGAGGTCTTATCGATCAGCGAGTAGTTTTTTTGCTATGTCATCTTGTT CGTAGATTCTAGTAGGAAGAGTAGTTTGGACATGGTTGGCTGAGTGGTTACTACTGCTGTGATCTCCGGATGTTTCTACCTGAAAAAATATGTGAACCTTGAATCTGCTTGGTAGCATCTATGATCAATCTGCAGTGCAGCTGGTTAAATTC GTGCCGCTGCTATTCTGATATAGACATATAGTTATATGAGTTCTTGTGTTGAGCATGGGGATGATATACCCACTGGATTCATCTTGGTTTTCTGAATGCAAGGGTCAATTAGCACTGGTTCA ] [+] EMBL AU077550 [ AGCC GAAGGGGGAGATCGTGNCGGCGCCGGCGGAGAAGGTGGCGTGC TTCAAG AAGAC GGCGGGGGAGNAGGCGG ACGCGACGTT CAT GGAGC GCGTC AAGGACTA CTATAACCAGC TCAAGGAGAGCT CCGCCGAG AAGCACTGGATCTGCATCAAGGACAAGTTCCGCGCCGCCGGCGA GT ACGTCTCACAGAAGAGCAGCTCGGTGTTCGGCAAGAAGAAGGTCGAGCCCGTGGTCAAGGA TGC TGCAGTTCCAGGGG AGGCGAGTTCGG TGACAGT CGAGTCTCAGTGA GGGGGGGC TAGCTTCTGATCAGTACCAACTTTGATGAGACAAGTGTAAATCCTCTTAGGTGCTCAACGGTGGAAC TTGAATTGTGAGGTCTTATCGATCAGCGAGTAGTTTTTTTGCTATGTCATCTTGTT CGTAGATTCTAGTAGGAAGAGTAGTTTGGACATGGTTGGCTGAGTGGTTACTACTGCTGTGATCTCCGGATGTTTCTACCTGAAAAAATATGTGANCCTTGAATCTGCTTGGTAGCATCTATGATCAATCTGCAGTGCAGCTGGTTAAAaaa aa ] [+] EMBL AU091785 [ AGATCGTGNCGGCGCCGGCGGAGAAGGTGGCGTGC TTCAAG AAGAC GGCGGGGGAGGAGGCGG ACGCGACGTT CAT GGAGC GCGTC AAGGACTA CTATAACCAGC TCAAGGAGAGCT CCGCCGAG AAGCACTGGATCTGCATCAAGGACAAGTTCCGCGCCGCCGGCGA GT ACGTCTCACAGAAGAGCAGCTCGGTGTTCGGCAAGAAGAAGGTCGAGCCCGTGGTCAAGGA TGC TGCAGTTCCAGGGG AGGCGAGTTCGG TGACAGT CGAGTCTCAGTGA GGGGGGGC TAGCTTCTGATCAGTACCAACTTTGATGAGACAAGTGTAAATCCTCTTAGGTGCTCAACGGTGGAAC TTGAATTGTGAGGTCTTATCGATCAGCGAGTAGTTTTTTTGCTATGTCATCTTGTT CGTAGATTCTAGTAGGAAGAGTAGTTTGGACATGGTTGGCTGAGTGGTTACTACTGCTGTGATCTCCGGATGTTTCTACCTGAAAAAATATGTGAACCTTGAATCaaaa ] [+] EMBL C93517 [ GCGGAGAAGGTGGCGTGC TTCAAG AAGAC GGCGGGGGAGGAGGCGG ACGCGACGTT CAT GGAGC GCGTT AAGGACTA CTATAACCAGC TCAAGGAGAGCT CCGCCGAG AAGCACTGGATCTGCATCAAGGACAAGTTCCGCGCCGCCGGNAG GT ACGTNTCACAGAAGAGCAGCTCGGTGTTCGGCAAGAAGAAGGTCGAGCCCGTGGTCAAGGATTGCTTGCAGTTCCAGGGG AGGCGAGTTCGGTTGACAGT NGAGTCTCAGTGA GGGGGGGC TAGCTTCTNATCAGTACCAACTT ] [+] EMBL OSC26321 [ CAAG AAGAC GGCGGGGGAGGAGGCGG ACGCGACGTT CAT GGAGC GCGTC AAGGACTA CTATAACCAGC TCAAGGAGAGCT CCNCCGAG AAGCACTGGATCTGCATCAAGGACAAGTTCCGCGCCGCCGGCGA GT ACGTCTCACAGAAGAGCAGCTCGGTGTTCGGCAAGAAGAAGGTCGAGCCCGTGGTCAAGGA TGC TGCAGTTCCAGGGG AGGCGAGTTCGG TGACAGT CGAGTCTCAGTNA GGGGGGGCTTAGCTTCTGATCAGTACCCACTTTGATGAGACAAGTGTAAATCCTCTTAGGTGCTCAACGGTGGGACTTTGAA ] [+] EMBL AU163392 [ AAGAAANAC GGCGGGGNAAGAAGCGGAACGCGACGTTCCAT GGAGCGGCGTC AAGGACTACCTATACCCAGC TCAAGGAGAGCTCCCGCCGAGAAAGCACTGGATCTGCATCAAGGNCAAGTTCCGCGCCGCCGGCGA GT ACGTCTCACAGAAGAGCAGCTCGGTGTTCGGCAAGAAGAAGGTCGAGCCCGTGGTCAAGGA TGC TGCAGTTCCAGGGG AGGCGAGTTCGG TGACAGT CGAGTCTCAGTGA GGGGGGGC TAGCTTCTGATCAGTACCAACTTTGATGAGACAAGTGTAAATCCTCTTAGGTGCTCAACGGTGGAAC TTGAATTGTGAGGTCTTATCGATCAGCGAGTAGTTTTTTTGCTATGTCATCTTGTT CGTAGATTCTAGTAGGAAGAGTAGTTTGGACATGGTTGGCTGAGTGGTTACTACTGCTGTGATCTCCGGATGTTTCTACCTG AAAAATATGTGAACCTTGAATCTGCTTGGTAGCATCTATGATCAATCTGCAGTGCAGCTGGTTAAATTC GTGCCGCTGCTATTCTGATATAGACATATAGTTATATGAGTTCTTGTGTTGAGCATGGGGATGATATACCCACTGNATTCATCTTGGTTTTCTGAATGCAAGGGTCAATTAGCACTGGTTCATTGTGAATGCAAAAAAAAAA] [+] EMBL C96960 [ GCGG ACGCGACGTT CAT GGAGC GCGTC AAGGACTA CTATAACCAGC NCAAGGAGAGCT CCGCCGAG AAGCACTGGATCTGCATCAAGGACAAGTTCCGCGCCGCCGG GA GT ACGTCTCACAGAAGAGCAGCTCGGTGTTCGGCAAGAAGAAGGTCGAGCCCGTGGTCAAGGA TGC TGCAGTTCCAGGGG AGGCGAGTTCGG TGACAGT CGAGTCTCAGTGA GGGGGGGC TAGCTTCTGATCAGTACCAACTTTGATGAGACAAGTGTAAATCCTCTTAGGTGCTCAACGGTGGAAC TTGAATTGTGAGGTCTTATCGATCAGCGAGTAGTTTTTTTGCTATGTCATCTTGTTCCGTAGATTCTAGTAGGAAGAGTAGTTTt ] [+] EMBL AU181534 [ GGCGA GT ACGTCTCACAGAAGAGCAGCTCGGTGTTCGGCAAGAAGAAGGTCGAGCCCGTGGTCAAGGA TGC TGCAGTTCCAGGGG AGGCGAGTTCGG TGACAGT CGAGTCTCAGTGA GGGGGGGC TAGCTTCTGATCAGTACCAACTTTGATGAGACAAGTGTAAATCCTCTTAGGTGCTCAACGGTGGAAC TTGAATTGTGAGGTCTTATCGATCAGCGAGTAGTTTTTTTGCTATGTCATCTTGTT CGTAGATTCTAGTAGGAAGAGTAGTTTGGACATGGTTGGCTGAGTGGTTACTACTGCTGTGATCTCCGGATGTTTCTACCTGAAAAAATATGTGAACCTTGAATCTGCTTGGTAGCATCTATGATCAATCTGCAGTGCAGCTGGTTAAATTCTGTGCCGCTGCTATTCTGATATAGACATATAGTTATATGAAAAA ] [+] EMBL AU182127 [ CCCGTGGTCAAGGA TGC TGCAGTTCCAGGGG AGGCGAGTTCGG TGACAGT CGAGTNTCAGTGA GGGGGGGN TAGCTTTTGATCAGTACCAACTTTGATGAGACAAGTGTAAATCCTNTTAGGTGCTCAACGGTGGAAC TTGAATTGTGAGGTNTTATCGATCAGCGAGTAGTTTTTTTGCTATGTCATCTTGTT CGTAGATTNTAGTAGGAANAGTAGTTTGGACATGGTTGGCTGAGTGGTTACTACTGCTGTGATCTCCGGATGTTTNTACCTGAAAAAATATGTGAACCTTGAATNTGCTTGGTAGCATNTATGATCAATNTGCAGTGCAGCTGGTTAAATTC GNGCCGCTGCTATTNTGATNTAAAAAAAAAAAAAAAAAAAAAAaa ] [+] EMBL C96959 [ gggna AGCCGAGTTCGG TGACAGT CGAGTCTCAGTGA GGGGGGGC TAGCTTCTGATCAGTACCAACTTTGATGAGACAAGTGTAAATCCTCTTAGGTGCTCAACGGTGGAAC TTGAATTGTGAGGTCTTATCGATCAGCGAGTAGTTTTTTTGCTATGTCATCTTGTT CGTAGATTCTAGTAGGAAGAGTAGTTTGGACATGGTTGGCTGAGTGGTTACTACTGCTGTGATCTCCGGATGTTTCTACCTGAAAAAATATGTGANCCTTGAATCTGCTTGGTAGCATCTATGATCAATCTGCAGTGCAGCTGGTTAAATTC GTGCCGCTGCTATTCTNATATAGACATATAGTTATATGAAAAA ] [+] EMBL AU161137 [ GAGACAAGTGTAAATCCTCTTAGGTGCTCAACGGTGGAAC TTGAATTGTGAGGTCTTATCGATCAGCGAGTAGTTTTTTTGCTATGTCATCTTGTT CGTAGATTCTAGTAGGAAGAGTAGTTTGGACATGGTTGGCTGAGTGGTTACTACTGCTGTGATCTCCGGATGTTTCTACCTGAAAAAATATGTGAACCTTGAATCTaaaaaaaa ] consensusID : consensus_14942#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 527 fasta sequence [TCCTTCTCTCCGATTCGTCGTTAACTGTGTGTGTGTTCTTTTTTGCGCAGGAGGAGGATTCGTTTCTTCGCGGTCCCCGTGTTGAATAGGAAGGAATTCAGAGGGATTAGTCCTCATCGCCGAGGTTTTTCTTATACTACCACCACGGTTGATTTACCGGACCTCTCAAGGCAACAGCGGATGATGTTCGGGCGGCGACGTTTATGGAGCGCGCGCGTCAAGGACTAGTACAGCCAGTTCAAGGAGAACTCCGCCGAGAAAGCACTGGATCTGCATCGAGGACAAGTTCCGCGCCGCCGGCGACTACGTCTCACAGAAGAGCAGCTCGGTGTTTGGCAAAAAGAAGGTCGAGCCCATGGTCAAGGATGCAGCAGCTCCAGGGAAGGGCGGGAGGTGACTCCGGTGGCAGTCGAATCTCAGTGAAGGGGGCTCGCATCTGATCATAACCAACTTGAGACAAGTGTAAATCCTCTTAGGTATTCGATGGTGGAATTTTTGGAGCTGTGAGATCTTATCGATCAGCTTAA] [+] EMBL CF309069 [TCCTTCTCTCCGATTCGTCGTTAACTGTGTGTGTGTTCTTTTTTGCGCAGGAGGAGGATTCGTTTCTTCGCGGTCCCCGTGTTGAATAGGAAGGAATTCAGAGGGATTAGTCCTCATCGCCGAGGTTTTTCTTATACTACCACCACGGTTGATTTACCGGACCTCTCAAGGCAACAGCGGATGATGTTCGGGCGGCGACGTTTATGGAGCGCGCGCGTCAAGGACTAGTACAGCCAGTTCAAGGAGAACTCCGCCGAGAAAGCACTGGATCTGCATCGAGGACAAGTTCCGCGCCGCCGGCGACTACGTCTCACAGAAGAGCAGCTCGGTGTTTGGCAAAAAGAAGGTCGAGCCCATGGTCAAGGATGCAGCAGCTCCAGGGAAGGGCGGGAGGTGACTCCGGTGGCAGTCGAATCTCAGTGAAGGGGGCTCGCATCTGATCATAACCAACTTGAGACAAGTGTAAATCCTCTTAGGTATTCGATGGTGGAATTTTTGGAGCTGTGAGATCTTATCGATCAGCTTAA] consensusID : consensus_14942#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 443 fasta sequence [GTAGTCTTCGTCTGAGAGAGAGAGAGAGAGAGGTTTGGGGGGTAGGTGTTGTTGGGGGAGTCGTCGAGATGGAGAAAGAGGGCGGAGTGAAGGCGGCGG-CGGAGGCGGAGTCGTCT-CACAGAAGAG-CAGCT-CGGTGTTCGG-CAAGAAGAAGGTCGAGCCCGTGGT-CAAGGATGCTG-CAGTTCCAGGGGAGGCGAGTTCGGTGACAGTCGAGTCTCAGTGAGGGGGGGCTAGCTTCTGATCAGTACCAACTTTGATGAGACAAGTGTAAATCCTCTTAGGTNCTCAACGGTGGAACTTGAATTGTGAGGTCTTATCGATCAGCGAGTAGTTTTTTTGCTATGTCATCTTGTTCGTAGATTCTAGTAGGAAGAGTAGTTTGGACATGGTTGGCTGAGTGGTTACTACTGCTGTGATCTCCGGATGTTTCTACCTGAAAAAAAAAA] [+] EMBL OS0005A [GTAGTCTTCGTCTGAGAGAGAGAGAGAGAGAGGTTTGGGGGGTAGGTGTTGTTGGGGGAGTCGTCGAGATGGAGAAAGAGGGCGGAGTGAAGGCGGCGG CGGAGGCGGAGTCGTCT CACAGAAGAG CAGCT CGGTGTTCGG CAAGAAGAAGGTCGAGCCCGTGGT CAAGGATGCTG CAGTTCCAGGGGAGGCGAGTTCGGTGACAGTCGAGTCTCAGTGAGGGGGGGCTAGCTTCTGATCAGTACCAACTTTGATGAGACAAGTGTAAATCCTCTTAGGTNCTCAACGGTGGAACTTGAATTGTGAGGTCTTATCGA ] [+] EMBL AU090467 [ ggcGCGGANTGAAGGCGGCGGCCGGAGGCGGAGTCGTCTCCACAGAAGAGCCAGCTCCGGTGTTCGGNCAAGAAGAAGGTCGAGCCCGTGGTCCAAGGATGCTGCCAGTTCCAGGGGAGGCGAGTTCGGTGACAGTCGAGTCTCAGTGAGGGGGGGCTAGCTTCTGATCAGTACCAACTTTGATGAGACAAGTGTAAATCCTCTTAGGTGCTCAACGGTGGAACTTGAATTGTGAGGTCTTATCGATCAGCGAGTAGTTTTTTTGCTATGTCATCTTGTTCGTAGATTCTAGTAGGAAGAGTAGTTTGGACATGGTTGGCTGAGTGGTTACTACTGCTGTGATCTCCGGATGTTTCTACCTGAAAAAAAAAA] consensusID : consensus_14942#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 392 fasta sequence [TGNTTCATGGAGCGCGTCAAGGACTACTATAACCAGCTCAAGGAGAGCTCCGNCGAGAAGCACTGGATCTGCATCAAGGACAAGNTCCGCGCCGCCGGGAGTACGTCTCACAGAAGAGCAGCTCGGTGTTCGNCAAGAAGAAGGTCGAGCCCGTGGTCAAGGATNCTGCAGTTCCAGNGGAGNCGAGTTCGGTGACANTCGNGTCTCAGTGAGGGGGGNCTAGCTTCTGATCAGTANCAACTTTGATGAGACANGTGTAAAATACTCTNAAGGTGCTCAACGNNTGGNACTTTGAATTNTGAGGGTCTTATTCGNTCAGCGAGTAGTTTNTGTTGCTATNNCCATCTTTNCCNNACNGGGGTGGNCNNCNGTANTNGGAACTGNGTNCTTNN] [+] EMBL OSC18591 [TGNTTCATGGAGCGCGTCAAGGACTACTATAACCAGCTCAAGGAGAGCTCCGNCGAGAAGCACTGGATCTGCATCAAGGACAAGNTCCGCGCCGCCGGGAGTACGTCTCACAGAAGAGCAGCTCGGTGTTCGNCAAGAAGAAGGTCGAGCCCGTGGTCAAGGATNCTGCAGTTCCAGNGGAGNCGAGTTCGGTGACANTCGNGTCTCAGTGAGGGGGGNCTAGCTTCTGATCAGTANCAACTTTGATGAGACANGTGTAAAATACTCTNAAGGTGCTCAACGNNTGGNACTTTGAATTNTGAGGGTCTTATTCGNTCAGCGAGTAGTTTNTGTTGCTATNNCCATCTTTNCCNNACNGGGGTGGNCNNCNGTANTNGGAACTGNGTNCTTNN] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14942#1 ---TCCTTCTCTCCGATTCGTCGTTAACTGTGTGTGTGTTCTTTTTTGCGCAGGAGGAGG 57 consensus_14942#3 ------------------------------------------------------------ consensus_14942#0 GCACTAGTAGTCTTCGTCTGAGAGAGAGAGAGAGAGAGGTTTGGGGGGTAGGTGTTGTTG 60 consensus_14942#2 ------------------------------------------------------------ consensus_14942#1 ATTCGTTTCTTCGCGGTCCCCGTGTTGAATAGGAAGGAATTCAGAGGGATTAGTCCTCAT 117 consensus_14942#3 ------------------------------------------------------------ consensus_14942#0 GGGGAGTCGTCGAGATGGAGAAAGAGGGCGGAGTGAAGGCGGCGGCGGAGGCGGAGGCGG 120 consensus_14942#2 ------------------------------------------------------------ consensus_14942#1 CGCCGAGGTTTTTCTTATACTACCACCACGGTTGATTTACCGGACCTCTCAAGGCAACAG 177 consensus_14942#3 ------------------------------------------------------------ consensus_14942#0 AGGCGGAGGGGGAGATCGTGGCGGCGCCGGCGGAGAAGGTGGCGTGCTTCAAGAAGACGG 180 consensus_14942#2 ----------------------------------------------------GTAGTCTT 8 consensus_14942#1 CGGATGATGTTCGGGCGGCGACGTTTATGGAGCGCGCGCGTCAAGGACTAGTACAGCCAG 237 consensus_14942#3 --------------------TGNTTCATGGAGCGCG----TCAAGGACTACTATAACCAG 36 consensus_14942#0 CGGGGGAGGAGGCGGACGCGACGTTCATGGAGCGCG----TCAAGGACTACTATAACCAG 236 consensus_14942#2 CGTCTGAGAGAGAGAGAGAGAGAGGTTTGGGGGGT-------AGGTGTTGTTG------- 54 *** * * * * * * consensus_14942#1 TTCAAGGAGAACTCCGCCGAGAAAGCACTGGATCTGCATCGAGGACAAGTTCCGCGCCGC 297 consensus_14942#3 CTCAAGGAGAGCTCCGNCGAGAA-GCACTGGATCTGCATCAAGGACAAGNTCCGCGCCGC 95 consensus_14942#0 CTCAAGGAGAGCTCCGCCGAGAA-GCACTGGATCTGCATCAAGGACAAGTTCCGCGCCGC 295 consensus_14942#2 -----GGGGAGT--CGTCGAGAT-GGAGAAAGAGGGCG----GAGTGAAGGCGGCGGCGG 102 ** ** ** ***** * * ** * * * *** ** consensus_14942#1 CGGCGACTACGTCTCACAGAAGAGCAGCTCGGTGTTTGGCAAAAAGAAGGTCGAGCCCAT 357 consensus_14942#3 CGG-GAGTACGTCTCACAGAAGAGCAGCTCGGTGTTCGNCAAGAAGAAGGTCGAGCCCGT 154 consensus_14942#0 CGGCGAGTACGTCTCACAGAAGAGCAGCTCGGTGTTCGGCAAGAAGAAGGTCGAGCCCGT 355 consensus_14942#2 AGGCGGAGTCGTCTCACAGAAGAGCAGCTCGGTGTTCGGCAAGAAGAAGGTCGAGCCCGT 162 ** * *************************** * *** *************** * consensus_14942#1 GGTCAAGGATGCAGCAGCTCCAGGGAAGGGCGGGAGGTGACTCCGGTGGCAGTCGAATCT 417 consensus_14942#3 GGTCAAGGATNCTGCAGTTCCAGNG--------GAGNCGAGTTCGGTGACANTCGNGTCT 206 consensus_14942#0 GGTCAAGGATGCTGCAGTTCCAGGG--------GAGGCGAGTTCGGTGACAGTCGAGTCT 407 consensus_14942#2 GGTCAAGGATGCTGCAGTTCCAGGG--------GAGGCGAGTTCGGTGACAGTCGAGTCT 214 ********** * **** ***** * *** ** * ***** ** *** *** consensus_14942#1 CAGTGAAGGGGGC-TCGCATCTGATCATAACCAACTT----GAGACAAGTGTAAA-TCCT 471 consensus_14942#3 CAGTGAGGGGGGNCTAGCTTCTGATCAGTANCAACTTTGATGAGACANGTGTAAAATACT 266 consensus_14942#0 CAGTGAGGGGGGGCTAGCTTCTGATCAGTACCAACTTTGATGAGACAAGTGTAAA-TCCT 466 consensus_14942#2 CAGTGAGGGGGGGCTAGCTTCTGATCAGTACCAACTTTGATGAGACAAGTGTAAA-TCCT 273 ****** ***** * ** ******** * ****** ****** ******* * ** consensus_14942#1 CTTA-GGTATTCGATGGTGGAATTTTTGGAGCTGTGAGATCTTAT-CGATCAGCTTAA-- 527 consensus_14942#3 CTNAAGGTGCTCAACGNNTGGNACTTTGAATTNTGAGGGTCTTATTCGNTCAGCGAGTAG 326 consensus_14942#0 CTTA-GGTGCTCAACGGTGGAACTT---GAATTGTGAGGTCTTAT-CGATCAGCGAGTAG 521 consensus_14942#2 CTTA-GGTNCTCAACGGTGGAACTT---GAATTGTGAGGTCTTAT-CGATCAGCGAGTAG 328 ** * *** ** * * * * * * ****** ** ***** consensus_14942#1 ------------------------------------------------------------ consensus_14942#3 TTTNTGTTGCTATNNCCATCTTTNCCNNACNGGGGTGGNCNNCNGTANTNGGAACTGNGT 386 consensus_14942#0 TTTTTTTGCTATGTCATCTTGTTCGTAGATTCTAGTAGGAAGAGTAGTTTGGACATGGTT 581 consensus_14942#2 TTTTTTTGCTATGTCATCTTGTTCGTAGATTCTAGTAGGAAGAGTAGTTTGGACATGGTT 388 consensus_14942#1 ------------------------------------------------------------ consensus_14942#3 NCTTNN------------------------------------------------------ 392 consensus_14942#0 GGCTGAGTGGTTACTACTGCTGTGATCTCCGGATGTTTCTACCTGAAAAAATATGTGAAC 641 consensus_14942#2 GGCTGAGTGGTTACTACTGCTGTGATCTCCGGATGTTTCTACCTGAAAAAAAAAA----- 443 consensus_14942#1 ------------------------------------------------------------ consensus_14942#3 ------------------------------------------------------------ consensus_14942#0 CTTGAATCTGCTTGGTAGCATCTATGATCAATCTGCAGTGCAGCTGGTTAAATTCGTGCC 701 consensus_14942#2 ------------------------------------------------------------ consensus_14942#1 ------------------------------------------------------------ consensus_14942#3 ------------------------------------------------------------ consensus_14942#0 GCTGCTATTCTGATATAGACATATAGTTATATGAAAAATTGTGTTGAGCATGGGGATGAT 761 consensus_14942#2 ------------------------------------------------------------ consensus_14942#1 ------------------------------------------------------------ consensus_14942#3 ------------------------------------------------------------ consensus_14942#0 ATACCCACTGGATTCATCTTGGTTTTCTGAATGCAAGGGTCAATTAGCACTGGTTCATTG 821 consensus_14942#2 ------------------------------------------------------------ consensus_14942#1 ----------------- consensus_14942#3 ----------------- consensus_14942#0 TGAATGCAAAAAAAAAA 838 consensus_14942#2 ----------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||