These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15008#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 1617 fasta sequence [GCCTTCTGCAAACAGATGAACTACGTATATTTCACAACAGTGTACCTGAAGAGATAATTTCAACAGTCAGATTGGAAGAATCTGATGCATTCTATATGCTAGAACTTAGCACGAGCAGAGAATTTAGCTCGTCTTTGCTAGATAAGAACGCTGCCATCTTAATCTGTATAATTGATGCCAATGGTGATTCCCTGTTACAAAGAGTACCAGCAGCCTATTGTAATCATTCTGCACAAGGCAGAGAGGCCGAGAAATTGCTTCCCTTCCAAAGCGGTTCAGTTGATGTTGTCACCTTTAGAGGCTCTAAGCTGCAAAGAATTAAAGAAATCTGGGTTGGTCTTGA-----GTCAG-----GCTCATGGAGAATAGATAATTTAAGCTTGAAAGTTATCCATGGACAGTTGAATACACCTCCAGATCTGGAGGAAACACCTGAACTCAAGTTCAATGGTCTGCAGTACACATTTGACAAACTCAGCATGCTGCTTGGAGAGGATGGAGCTTCAGTTGTGGAAGCAAGACCTGTGGCTGTCACTGATCTCACGGGAATAAGCCTTTCTGATCTCCAAGAGGGGCAATTATCCTCAGCAAGCACAGCTTCAAGCATCCTTGAAATGAAAGAGGATGGCTTGAAAGAGTATGCTGACCTCAAGCAGTCGCTGCTGCTCTACGATCTTGCTATTGTGATAACAGGTTTCTCTGCCTTCACCTTGGCTTCAAATGACAGTGCTGCCCTCTCGTTCCTTGTTGGAGGCATTGGAGGATTTCTCTATCTGTTGCTGCTCCAAAAATCTGTAGACGGGTTGCCGGCGCTTAATTCACCATCAGAAGCTGGCAGTGCCCAGCCCTCTGTGAAAGGTTTCAGTGGCATAAGGAGGCCATGGTTAATATTGTCACTGTTAATGGTCGCTGGAGCTGTTGCATTGAAATATGGAGCGGGTGGTGACAAACTTGAAATGACGCCAGTCGAGCTCTTTGTTGGCACTGCAGGGTTCCTGGCGAACAAGGTTGCCATTGTTCTCGCGGCATTCAAACCCTTGCAGAGTAATTTGAAGGCTGAAGACCGATCTGGAGACTGAACATAGTCAGGCTGCCTTGAATATACTAACATTTATATAGCGGCTATACAGTATCATGATCTGAATGTTAATTATCGAAGTGCCTAGTTCAAGTTTCCAGAGGGAACTTGAGCCTTATCTCTAGCTCACAAGCACAGCTGCCGATCACA-AATGCTCTTCTTGAATCGTAAGCA-TTTCTTTAAGGGTTCAACTCGGATATGAATTTTTCATCTGAAGTATACCGAAACTTCACTG--ATTTCACATCACAGGCATGGAGATTGGCAGTGTGGCCTATATCAACATTCCAGACATTTGAACAGATCCAAATGATAATCTAGGTGACATAGTATAGATGTATAGTCACATGATAGTGCCATAGGCTTATAGCAGAACAATATATTCTTCAATGTATGTAAATCTGGTATACTAATGGTTACAATTTTAATGATTATGTAGCAGTAATACTGCTGCTT-CTAGCAGAATATATTATATTATTGGTGTATATAAATCCGGTACTAATGATT-CAAATGTAATAATTACAATGTATGAATAGAAATCGCTTTGG] [+] EMBL AK068341 [GCCTTCTGCAAACAGATGAACTACGTATATTTCACAACAGTGTACCTGAAGAGATAATTTCAACAGTCAGATTGGAAGAATCTGATGCATTCTATATGCTAGAACTTAGCACGAGCAGAGAATTTAGCTCGTCTTTGCTAGATAAGAACGCTGCCATCTTAATCTGTATAATTGATGCCAATGGTGATTCCCTGTTACAAAGAGTACCAGCAGCCTATTGTAATCATTCTGCACAAGGCAGAGAGGCCGAGAAATTGCTTCCCTTCCAAAGCGGTTCAGTTGATGTTGTCACCTTTAGAGGCTCTAAGCTGCAAAGAATTAAAGAAATCTGGGTTGGTCTTGA GTCAG GCTCATGGAGAATAGATAATTTAAGCTTGAAAGTTATCCATGGACAGTTGAATACACCTCCAGATCTGGAGGAAACACCTGAACTCAAGTTCAATGGTCTGCAGTACACATTTGACAAACTCAGCATGCTGCTTGGAGAGGATGGAGCTTCAGTTGTGGAAGCAAGACCTGTGGCTGTCACTGATCTCACGGGAATAAGCCTTTCTGATCTCCAAGAGGGGCAATTATCCTCAGCAAGCACAGCTTCAAGCATCCTTGAAATGAAAGAGGATGGCTTGAAAGAGTATGCTGACCTCAAGCAGTCGCTGCTGCTCTACGATCTTGCTATTGTGATAACAGGTTTCTCTGCCTTCACCTTGGCTTCAAATGACAGTGCTGCCCTCTCGTTCCTTGTTGGAGGCATTGGAGGATTTCTCTATCTGTTGCTGCTCCAAAAATCTGTAGACGGGTTGCCGGCGCTTAATTCACCATCAGAAGCTGGCAGTGCCCAGCCCTCTGTGAAAGGTTTCAGTGGCATAAGGAGGCCATGGTTAATATTGTCACTGTTAATGGTCGCTGGAGCTGTTGCATTGAAATATGGAGCGGGTGGTGACAAACTTGAAATGACGCCAGTCGAGCTCTTTGTTGGCACTGCAGGGTTCCTGGCGAACAAGGTTGCCATTGTTCTCGCGGCATTCAAACCCTTGCAGAGTAATTTGAAGGCTGAAGACCGATCTGGAGACTGAACATAGTCAGGCTGCCTTGAATATACTAACATTTATATAGCGGCTATACAGTATCATGATCTGAATGTTAATTATCGAAGTGCCTAGTTCAAGTTTCCAGAGGGAACTTGAGCCTTATCTCTAGCTCACAAGCACAGCTGCCGATCACA AATGCTCTTCTTGAATCGTAAGCA TTTCTTTAAGGGTTCAACTCGGATATGAATTTTTCATCTGAAGTATACCGAAACTTCACTG ATTTCACATCACAGGCATGGAGATTGGCAGTGTGGCCTATATCAACATTCCAGACATTTGAACAGATCCAAATGATAATCTAGGTGACATAGTATAGATGTATAGTCACATGATAGTGTCATAGGCTTATAGCAGAACAATATATTCTTCAGTGTATGTAAATCTGGTATACTAATGGTTACAATTTTAATGATTATGTAGCAGTAATACCGCTGCTT CTAGCAGAATATATTATATTATTGGTGTATATAAATCCGGTACTAATGATT CAAATGTAATAATTACA ] [+] EMBL CB663205 [GCCTTCTGCAAACAGATGAACTACGTATATTTCACAACAGTGTACCTGAAGAGATAATTTCAACAGTCAGATTGGAAGAATCTGATGCATTCTATATGCTAGAACTTAGCACGAGCAGAGAATTTAGCTCGTCTTTGCTAGATAAGAACGCTGCCATCTTAATCTGTATAATTGATGCCAATGGTGATTCCCTGTTACAAAGAGTACCAGCAGCCTATTGTAATCATTCTGCACAAGGCAGAGAGGCCGAGAAATTGCTTCCCTTCCAAAGCGGTTCAGTTGATGTTGTCACCTTTAGAGGCTCTAAGCTGCAAAGAATTAAAGAAATCTGGGTTGGTCTTGA GTCAGGTCACGCTCATGGAGAATAGATAATTTAAGCTTGA ] [+] EMBL CB641464 [GCCTTCTGCAAACAGATGAACTACGTATATTTCACAACAGTGTACCTGAAGAGATAATTTCAACAGTCAGATTGGAAGAATCTGATGCATTCTATATGCTAGAACTTAGCACGAGCAGAGAATTTAGCTCGTCTTTGCTAGATAAGAACGCTGCCATCTTAATCTGTATAATTGATGCCAATGGTGATTCCCTGTTACAAAGAGTACCAGCAGCCTATTGTAATCATTCTGCACAAGGCAGAGAGGCCGAGAAATTGCTTCCCTTCCAAAGCGGTTCAGTTGATGTTGTCACCTTTAGAGGCTCTAAGCTGCAAAGAATTAAAGAAATCTGGGTTGGTCTTGA GTCAG GCTCATGGAGAATAGATAATTTAAGCTTGAAAGTTATCCATGGACAGTTGAATACACCTCCAGATCTGGAGG ] [+] EMBL CB626904 [GCCTTCTGCAAACAGATGAACTACGTATATTTCACAACAGTGTACCTGAAGAGATAATTTCAACAGTCAGATTGGAAGAATCTGATGCATTCTATATGCTAGAACTTAGCACGAGCAGAGAATTTAGCTCGTCTTTGCTAGATAAGAACGCTGCCATCTTAATCTGTATAATTGATGCCAATGGTGATTCCCTGTTACAAAGAGTACCAGCAGCCTATTGTAATCATTCTGCACAAGGCAGAGAGGCCGAGAAATTGCTTCCCTTCCAAAGCGGTTCAGTTGATGTTGTCACCTTTAGAGGCTCTAAGCTGCAAAGAATTAAAGAAATCTGGGTTGGTCTTGAGTCAGGTCAG GCTCATGGAGAATAGATAATTTAAGCTTGAAAGTTATCCATGGACAGTTGAATACACCTCCAGATCTGGAGGAAACACCTGAACTCAAGTTCAATGGTCTGCAGTACACATTTGACAAACTCAGCATGCTGCTTGGAGAGGATGGAGCTTCAGTTGTGGAAGCAAGACCTGTGGCTGTCACTGATCTCACGGGAATAAGCCTTTCTGATCTCCAAGAGGGGCAATTATCCTCAGCAAGCACAGCTTCAAGCATCCTTGAAATGAAAGAGGATGGCTTGANAGAGTATGCTGACCTCAAGCAGTCGCTGCTGCTCTACGATCTTGCTATTGTGATAACAGGT ] [+] EMBL CF304171 [GCCTTCTGCAAACAGATGAACTACGTATATTTCACAACAGTGTACCTGAAGAGATAATTTCAACAGTCAGATTGGAAGAATCTGATGCATTCTATATGCTAGAACTTAGCACGAGCAGAGAATTTAGCTCGTCTTTGCTAGATAAGAACGCTGCCATCTTAATCTGTATAATTGATGCCAATGGTGATTCCCTGTTACAAAGAGTACCAGCAGCCTATTGTAATCATTCTGCACAAGGCAGAGAGGCCGAGAAATTGCTTCCCTTCCAAAGCGGTTCAGTTGATGT ] [+] EMBL CB633749 [ TCAAGCA CCTCTGATGCTCTACGATCTTGCTATTGTGATAACAGGTTTCTCTGCCTTCACCTTGGCTTCAAATGACAGTGCTGCCCTCTCGTTCCTTGTTGGAGGCATTGGAGGATTTCTCTATCTGTTGCTGCTCCAAAAATCTGTAGACGGGTTGCCGGCGCTTAATTCACCATCAGAAGCTGGCAGTGCCCAACCCTCTGTGAAAGGTTTCAGTGGCATAAGGAGGCCATGGTTAATATTGTCACTGTTAATGGTCGCTGGAGCTGTTGCATTGAAATATGGAGCGGGTGGTGACAAACTTGAAATGACGCCAGTCGAGCTCTTTGTTGGCACTGCAGGGTTCCTGGCGAACAAGGTTGCCATTGTTCTCGCGGCATTCAAACCCTTGCAGAGTAATTTGAAGGCTGAAGACCGATCTGGAGACTGAACATAGTCAGGCTGCCTTGAATATACTAACATTTATATAGCGGCTATACAGTATCATGATCTGAATGTTAATTATCGAAGTGCCTAGTTCAAGTTTCCAGAGGGAACTTGAGCCTTATCTCTAGCTCACAAGCACAGCTGCCGATCACA AATGCTCTTCTTGAATCGTAAGCA TTTCTTTAAGGGTTCAACTCGGATATGAATTTTTCATCTGAAGTATACCGAAACTTCACTGAAATTTCACATCACAGGCATGGAAATTGGCAAGGTGGCCTA ] [+] EMBL CB619959 [ GCTCTACGATCTTGCTATTGTGATAACAGGTTTCTCTGCCTTCACCTTGGCTTCAAATGACAGTGCTGCCCTCTCGTTCCTTGTTGGAGGCATTGGAGGATTTCTCTATCTGTTGCTGCTCCAAAAATCTGTAGACGGGTTGCCGGCGCTTAATTCACCATCAGAAGCTGGCAGTGCCCAGCCCTCTGTGAAAGGTTTCAGTGGCATAAGGAGGCCATGGTTAATATTGTCACTGTTAATGGTCGCTGGAGCTGTTGCATTGAAATATGGAGCGGGTGGTGACAAACTCGAAATGACGCCAGTCGAGCTCTTTGTTGGCACTGCAGGGTTCCTGGCGAACAAGGTTGCCATTCTTCTCGCGGCATTCAAACCCTTGCAGAGTAATTTGAAGGCTGAAGACCGATCTGGAGACTGAACATAGTCAGGCTGCCTTGAATATACTAACATTTATATAGCGGCTATACAGTATCATGATCTGAATGTTAATTATCGAAGTGCCTAGTTCAAGTTTCCAGAGGGAACTTGAGCCTTATCTCTAGCTCACAAGCACAGCTGCCGATCACA AATGCTCTTCTTGAATCGTAAGCA TTTCTTTAAGGGTTCAACTCGGATATGAATTTTTCATCTGAAGTATACCGAAACTTCACTG ATTTCACATCACAGGCATGGAGATTGGCAGTGTGGCCTATATCAACATTCCAGACATTTGAACAGATCCAAATGATAATCTAGGTGACATAGTATAGATGTAT ] [-] EMBL CB633750 [ TTCTCTATCTGTTGCTGCTCCAAAAATCTGTAGACGGGTTGCCGGCGCTTAATTCACCATCAGAAGCTGGCAGTGCCCAACCCTCTGTGAAAGGTTTCAGTGGCATAAGGAGGCCATGGTTAATATTGTCACTGTTAATGGTCGCTGGAGCTGTTGCATTGAAATATGGAGCGGGTGGTGACAAACTTGAAATGACGCCAGTCGAGCTCTTTGTTGGCACTGCAGGGTTCCTGGCGAACAAGGTTGCCATTGTTCTCGCGGCATTCAAACCCTTGCAGAGTAATTTGAAGGCTGAAGACCGATCTGGAGACTGAACATAGTCAGGCTGCCTTGAATATACTAACATTTATATAGCGGCTATACAGTATCATGATCTGAATGTTAATTATCGAAGTGCCTAGTTCAAGTTTCCAGAGGGAACTTGAGCCTTATCTCTAGCTCACAAGCACAGCTGCCGATCACA AATGCTCTTCTTGAATCGTAAGCA TTTCTTTAAGGGTTCAACTCGGATATGAATTTTTCATCTGAAGTATACCGAAACTTCACTGAAATTTCACATCACAGGCATGGAGATTGGCAGTGTGGCCTATATCAACATTCCAGACATTTGAACAGATCCAAATGATAATCTAGGTGACATAGTATAGATGTATAGTCACATGATAGTGCCATAGGCTTATAGCAGAACAATATATTCTTCAATGTATGTAAATCTGGTATACTAATGGTTACAATTTTAATGATTATGGGGCAGTAATACTGCTGCTT CTAGCAGAAAAAA AAATTAaaaga ] [-] EMBL CB626905 [ GCCGGCGCTTAATTCACCATCAGAAGCTGGCAGTGCCCAACCCTCTGTGAAAGGTTTCAGTGGCATAAGGAGGCCATGGTTAATATTGTCACTGTTAATGGTCGCTGGAGCTGTTGCATTGAAATATGGAGCGGGTGGTGACAAACTTGAAATGACGCCAGTCGAGCTCTTTGTTGGCACTGCAGGGTTCCTGGCGAACAAGGTTGCCATTGTTCTCGCGGCATTCAAACCCTTGCAGAGTAATTTGAAGGCTGAAGACCGATCTGGAGACTGAACATAGTCAGGCTGCCTTGAATATACTAACATTTATATAGCGGCTATACAGTATCATGATCTGAATGTTAATTATCGAAGTGCCTAGTTCAAGTTTCCAGAGGGAACTTGAGCCTTATCTCTAGCTCACAAGCACAGCTGCCGATCACA AATGCTCTTCTTGAATCGTAAGCA TTTCTTTAAGGGTTCAACTCGGATATGAATTTTTCATCTGAAGTATACCGAAACTTCACTGAAATTTCACATCACAGGCATGGAGATTGGCAGTGTGGCCTATATCAACATTCCAGACATTTGAACAGATCCAAATGATAATCTAGGTGACATAGTATAGATGTATAGTCACATGATAGTGCCATAGGCTTATAGCAGAACAATATATTCTTCAATGTATGTAAATCTGGTATACTAATGGTTACAATTTTAATGATTATGTAGCAGTAATACTGCTGCTT CTAGCAGAATATATTATATTATTGGTGTATATAAATCCGGTACTAATGATT CAAATGTAATAATTACAATGTATGAATAGAAATCGCTTTGG] [-] EMBL CB619960 [ GCAGTGCCCAGCCCTCTGTGAAAGGTTTCAGTGGCATAAGGAGGCCATGGTTAATATTGTCACTGTTAATGGTCGCTGGAGCTGTTGCATTGAAATATGGAGCGGGTGGTGACAAACTCGAAATGACGCCAGTCGAGCTCTTTGTTGGCACTGCAGGGTTCCTGGCGAACAAGGTTGCCATTCTTCTCGCGGCATTCAAACCCTTGCAGAGTAATTTGAAGGCTGAAGACCGATCTGGAGACTGAACATAGTCAGGCTGCCTTGAATATACTAACATTTATATAGCGGCTATACAGTATCATGATCTGAATGTTAATTATCGAAGTGCCTAGTTCAAGTTTCCAGAGGGAACTTGAGCCTTATCTCTAGCTCACAAGCACAGCTGCCGATCACA AATGCTCTTCTTGAATCGTAAGCA TTTCTTTAAGGGTTCAACTCGGATATGAATTTTTCATCTGAAGTATACCGAAACTTCACTG ATTTCACATCACAGGCATGGAGATTGGCAGTGTGGCCTATATCAACATTCCAGACATTTGAACAGATCCAAATGATAATCTAGGTGACATAGTATAGATGTATAGTCACATGATAGTGCCATAGGCTTATAGCAGAACAATATATTCTTCAATGTATGTAAATCTGGTATACTAATGGTTACAATTTTAATGATTATGTAGCAGTAATACTTCTGCTT CTAGCAGAATATATTATATTATTGGCGTATATAAATCCGGTACTAATGATTCCAAAAG GGTAATTACAATGTATGAATA ] [-] EMBL CB641465 [ AGCCCTCTGTGAAAGGTTTCAGTGGCATAAGGAGGCCATGGTTAATATTGTCACTGTTAATGGTCGCTGGAGCTGTTGCATTGAAATATGGAGCGGGTGGTGACAAACTTGAAATGACGCCAGTCGAGCTCTTTGTTGGCACTGCAGGGTTCCTGGCGAACAAGGTTGCCATTGTTCTCGCGGCATTCAAACCCTTGCAGAGTAATTTGAAGGCTGAAGACCGATCTGGAGACTGAACATAGTCAGGCTGCCTTGAATATACTAACATTTATATAGCGGCTATACAGTATCATGATCTGAATGTTAATTATCGAAGTGCCTAGTTCAAGTTTCCAGAGGGAACTTGAGCCTTATCTCTAGCTCACAAGCACAGCTGCCGATCACA AATGCTCTTCTTGAATCGTAAGCA TTTCTTTAAGGGTTCAACTCGGATATGAATTTTTCATCTGAAGTATACCGAAACTTCACTG ATTTCACATCACAGGCATGGAGATTGGCAGTGTGGCCTATATCAACATTCCAGACATTTGAACAGATCCAAATGATAATCTAGGTGACATAGTATAGATGTATAGTCACATGATAGTGCCATAGGCTTATAGCAGAACAATATATTCTTCAGTGTATGTAAATCTGGTATACTAATGGTTACAATTTTAATGATTATGTAGCAGTAATACTGCTGCTTGGTAGCAGAATATATTATATTATTGGTGTATATCAAaaaaagga ] [-] EMBL CB631744 [ CAGTGGCATAAGGAGGCCATGGTTAATATTGTCACTGTTAATGGTCGCTGGAGCTGTTGCATTGAAATATGGAGCGGGTGGTGACAAACTTGAAATGACGCCAGTCGAGCTCTTTGTTGGCACTGCAGGGTTCCTGGCGAACAAGGTTGCCATTGTTCTCGCGGCATTCAAACCCTTGCAGAGTAATTTGAAGGCTGAAGACCGATCTGGAGACTGAACATAGTCAGGCTGCCTTGAATATACTAACATTTATATAGCGGCTATACAGTATCATGATCTGAATGTTAATTATCGAAGTGCCTAGTTCAAGTTTCCAGAGGGAACTTGAGCCTTATCTCTAGCTCACAAGCACAGCTGCCGATCACA AATGCTCTTCTTGAATCGTAAGCA TTTCTTTAAGGGTTCAACTCGGATATGAATTTTTCATCTGAAGTATACCGAAACTTCACTGAAATTTCACATCACAGGCATGGAGATTGGCAGTGTGGCCTATATCAACATTCCAGACATTTGAACAGATCCAAATGATAATCTAGGTGACATAGTATAGATGTATAGTCACATGATAGTGCCATAGGCTTATAGCAGAACAATATATTCTTCAATGTATGTAAATCTGGTATACTAATGGTTACAATTTTAATGATTATGTAGCAGTAATACTGCTGCTT CTAGC ] [-] EMBL CB663206 [ GGCATAAGGAGGCCATGGTTAATATTGTCACTGTTAATGGTCGCTGGAGCTGTTGCATTGAAATATGGAGCGGGTGGTGACAGACTTGAAATGACGCCAGTCGAGCTCTTTGTTGGCACTGCAGGGTTCCTGGCGAACAAGGTTTCCATTGTTCTCGCGGCATTCAAACCCTTGCAGAGTAATTTGAAGGCTGAAGACCGATCTGGAGACTGAACATAGTCAGGCTGCCTTGAATATACTAACATTTATATAGCGGGTATACAGTATCATGATCTGAATGTTAATTATCGAAGTGCATAGTTCAAGTTTCCAGAGGGAACTTGAGCCTTATCTCTAGCTCACAAGCACAGCTGCCGATCACA AATGTTCTTCTTGAATCGTAAGCA TTTCTTTAAGGGTTCAACTCGGATATGAATTTTTCATGTGAAGTATACCGAAACTTCCCTG ATTTCACATCACAGGCATGGAGATTGGCAGTGTGGCCTATATCAACATTCCAGACATTTGAACAGATCCAAATGATAATCTAGGTGTCATAGTATAGATGTATAGTCACATGATAGTGCCATAGGCTTATAGCAGAACAATATATTATTCAGTGTATGTAAATTTGGTATAGTAATGGTTACAATTTTAATGATTATGTAGCAGTAATTCTGCTGCTT GTAGCAGAATATATTATATTATTGGTGTATA ] [-] EMBL CA762074 [ AGGAGGCCATGGTTAATATTGTCACTGTTAATGGTCGCNGGAGCTGTGCCATTGAAATATGGAGCGGGTGGTGACAAACTCGAAATGACGCCAGTCGAGCTCTTTGTTGGCACTGCAGGGTTCCTGGCGAACAAGGTTGCCATTCTTCTCGCGGCATTCAAACCCTTGCAGAGTAATNTGAAGGCTGAAGACCGATCTGGAGACTGAACATAGTCAGGCTGCCTTGAATATACTAACATTTATATAGCGGCTATACAGTATCATGATCTGAATGTTAATTATCGAAGTGCCTAGTTCAAGTTTCCAGAGGGAACTTGAGCCTTATCTCTAGCTCACAAGCACAGCTGCCGATCACA AATGCTCTTCTTGAATCGTAAGCA TTTCTTTAAGGGTTCAACTCGGATATGAATTTTTCATCTGAAGTATACCGAAACTTCACTG ATTTCACATCACAGGCATGGAGATTGGCAGTGTGGCCTATATCAACATTCCAGACATTTGAACAGATCCAAATGATAATCTAGGTGACATAGTATAGATGTATAGTCACATGATAGTGCCATAGGCTTATAGCAGAACAATATATTCTTCAATGTATGTAAATCTGGTATACTAATGGTTACAATTTTAATGATTATGTAGCAGTAATACTTCTGCTT CTAGCAGAATATATTATATTATTGGCGTAAAAAAAa ] [+] EMBL CA764063 [ GCTGCCTTGAATATACTAACATTTATATAGCGGCTATACAGTATCATGATCTGAATGTTAATTACCGAAGTGCCTAGTTCAAGTTTCCAGAGGGAACTTGAGCCTTATCTCTAGCTCACAAGCACAGCTGCCGATCACA AATGCTCTTCTTGAATCGTAAGCA TTTCTTTAAGGGTTCAACTCGGATATGAATTTTTCATCTGAAGTATACCGAAACTTCACTG ATTTCACATCACAGGCATGGAGATTGGCAGTGTGGCCTATATCAACATTCCAGACATTTGAACAGATCCAAATGATAATCTAGGTGACATAGTATAGATGTATAGTCACATGATAGTGCCATAGGCTTATAGCAGAACAATATATTCTTCAATGTATGTAAATCTGGTATACTAATGGTTACAATTTTAATGATTATGTAGCAGTAATACTTCTGCTT CTAGCAGAATATATTATATTATTGGCGTATATAAATCCGGTACTAATGATT CAAATGTAATAATTACAATGTATGAATAGAAA ] [+] EMBL BQ907792 [ TATCATGATCTGAATGTTAATTATCGAAGTGCCTAGTTCAAGTTTCCAGAGGGAACTTGAGCCTTATCTCTAGCTCACAAGCACAGCTGCCGATCACA AATGCTCTTCTTGAATCGTAAGCA TTTCTTTAAGGGTTCAACTCGGATATGAATTTTTCATCTGAAGTATACCGAAACTTCACTG ATTTCACATCACAGGCATGGAGATTGGCAGTGTGGCCTATATCAACATTCCAGACATTTGAACAGATCCCAATGATAATCTAGGTGACATAGTATAGATGTATAGTCACATGATAGTGCCATAGGCTTATAGCAGAAC ATATATTCTTCAATGTATGTAAATCTGGTATACTAATGGTTACAATTTTAATGATTATGTA CAGTAATACTTCTGCTT CTA CAGAATATATTAaaaaaaaaa ] [+] EMBL BM420300 [ TTAATTATCGAAGTCCCTAGTTCAAGTTTCCAGAGGGAACTTGACCCTTATCTCTAGCTCACAAGCACAGCTGCCGATCACANAATGCTCTTCTTGAATCGTAA CACTTTCTTTAAGGGTTCAACTCGGATATGAATTTTTCATCTGAAGTATACCGAAACTTCACTG ATTTCACATCACAGGCATGGAGATTGGCAGTGTGGCCTATATCAACATTCCAGACATTTGAACAGATCCAAATGATAATCTAGGTGACATAGTATAGATGTATAGTCACATGATAGTGCCATAGGCTTATAGCAGAACAATATATTCTTCAATGTATGTAAATCTGGTATACTAATGGTTACCATTTTAATGATTATGTAGCAGTAATACTTCTGCTT CTAGCAGAATATATTATATTATTGGCGTATATAAATCCGGTACTAATGATT CAAAaaaaaaa ] consensusID : consensus_15008#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 479 fasta sequence [CGGATCCACAAAAATGCCTTCCTTTCCTTGGGATATTCGTAAACCACTTTTTCCTTTTTAAAAGGGTTTCCAAACCTTCCGGAATTATTGAAAATTTTTCCAATTCCGGAAAGTAATCCCGAACCTTTCACCTGGAGTTCCACCAATTCCACCAGCCATTGGAAGAATTTGGCCAACTTTTGGCCCCTAATAATCCACCACTTCCCAAGAACCAACTTTGGACCAAGAATTCCCAATGATAATCTAGTAACATAGTATAGATGTATAGTCACATGATAGTCCATAGGCTTATACAGAACCATATATTCTTCAATGTATGTAAATCTGGTATACTAATGGTTACAATTTTAATGATTATGTACAGTAATACTTCTGCTTCTACCAGAATATATTATATTATTGGCGTATATAAATCCGGTACTAATGATTCAAATGTAATAATTACCATGTATGAATAGAAATCGCTTTGGTAAAAAAAA] [+] EMBL BM421508 [CGGATCCACAAAAATGCCTTCCTTTCCTTGGGATATTCGTAAACCACTTTTTCCTTTTTAAAAGGGTTTCCAAACCTTCCGGAATTATTGAAAATTTTTCCAATTCCGGAAAGTAATCCCGAACCTTTCACCTGGAGTTCCACCAATTCCACCAGCCATTGGAAGAATTTGGCCAACTTTTGGCCCCTAATAATCCACCACTTCCCAAGAACCAACTTTGGACCAAGAATTCCCAATGATAATCTAGTAACATAGTATAGATGTATAGTCACATGATAGTCCATAGGCTTATACAGAACCATATATTCTTCAATGTATGTAAATCTGGTATACTAATGGTTACAATTTTAATGATTATGTACAGTAATACTTCTGCTTCTACCAGAATATATTATATTATTGGCGTATATAAATCCGGTACTAATGATTCAAATGTAATAATTACCATGTATGAATAGAAATCGCTTTGGTAAAAAAAA] consensusID : consensus_15008#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 404 fasta sequence [CATTCTATATGCTAGNACTTAGCACGANNNGAGAATTTNNNTCGTCTTTGCTAGATAAGAACGCTGCCATCTTAATCTGTATAATTGATGCCAATGGTGATTCCCTGTTACAAAGAGTACCAGCATCCTATTGTAATCATTCTGCACAAGGCAGAGAGGCCGAAAAATTGCTTCCCTTCCAAAGCGNNTCAGTTGATGTTGTCACCTTTNNNNGCTCTAAGCTGCANNNNATTACANAAATCTGGGTTGGTCTTGAGTCAGGCTCATGGAGAATNNNTAATTTAAGCTTGAAAGTTATCCATGGACAGTTGAATACACCTCCNNNTCTGGANNAAACACCTGAACTCAAGTTCANTGGTCTGCNNTACACATTTGACAAACTNNNNATGCTGCTTGGNNNNNAT] [+] EMBL CF197063 [CATTCTATATGCTAGNACTTAGCACGANNNGAGAATTTNNNTCGTCTTTGCTAGATAAGAACGCTGCCATCTTAATCTGTATAATTGATGCCAATGGTGATTCCCTGTTACAAAGAGTACCAGCATCCTATTGTAATCATTCTGCACAAGGCAGAGAGGCCGAAAAATTGCTTCCCTTCCAAAGCGNNTCAGTTGATGTTGTCACCTTTNNNNGCTCTAAGCTGCANNNNATTACANAAATCTGGGTTGGTCTTGAGTCAGGCTCATGGAGAATNNNTAATTTAAGCTTGAAAGTTATCCATGGACAGTTGAATACACCTCCNNNTCTGGANNAAACACCTGAACTCAAGTTCANTGGTCTGCNNTACACATTTGACAAACTNNNNATGCTGCTTGGNNNNNAT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_15008#0 GCCTTCTGCAAACAGATGAACTACGTATATTTCACAACAGTGTACCTGAAGAGATAATTT 60 consensus_15008#2 ------------------------------------------------------------ consensus_15008#1 --------------------------------------CGGATCCACAAAAATGCCTTCC 22 consensus_15008#0 CAACAGTCAGATTGGAAGAATCTGATGCATTCTATATGCTAGAACTTAGCACGAGCAGAG 120 consensus_15008#2 ---------------------------CATTCTATATGCTAGNACTTAGCACGANNNGAG 33 consensus_15008#1 TTTCCTTGGGATATTCGTAAACCACTTTTTCCTTTTTAAAAGGGTTTCCAAACCTTCCGG 82 * ** * * ** ** * * consensus_15008#0 AATTTAGCTCGTCTTTGCTAGATAAGAACGCTGCCATCTTAATCTGTATAATTGATGCCA 180 consensus_15008#2 AATTTNNNTCGTCTTTGCTAGATAAGAACGCTGCCATCTTAATCTGTATAATTGATGCCA 93 consensus_15008#1 AATTATTGAAAATTTTTCCAATTCCGGAAAGTAATCCCGAACCTTTCACCTGGAGTTCCA 142 **** *** * * * * * * * * * * * *** consensus_15008#0 ATGGTGATTCC--CTGTTACAAAGAGT--ACCAGCAG----CCTATTGTAATCATTC--T 230 consensus_15008#2 ATGGTGATTCC--CTGTTACAAAGAGT--ACCAGCAT----CCTATTGTAATCATTC--T 143 consensus_15008#1 CCAATTCCACCAGCCATTGGAAGAATTTGGCCAACTTTTGGCCCCTAATAATCCACCACT 202 * ** * ** ** * * *** * ** * ***** * * consensus_15008#0 GCACAAGGCAGAGAGGCCGAGAAATTGCTTCCCTTCCAAAGCGGTTCAGTTGATGTTGTC 290 consensus_15008#2 GCACAAGGCAGAGAGGCCGAAAAATTGCTTCCCTTCCAAAGCGNNTCAGTTGATGTTGTC 203 consensus_15008#1 TCCCAAGAACCAACTTTGGACCAAGAATTCCCAATGATAATCTAGTAACATAGTATAGAT 262 * **** * ** ** * ** * ** * * * * * * * consensus_15008#0 ACCTTTAGAGGCTCTAAGCTGCAAAGAATTAAAGAAATCTGGGTTGGTCT-TGAGTCAGG 349 consensus_15008#2 ACCTTTNNNNGCTCTAAGCTGCANNNNATTACANAAATCTGGGTTGGTCT-TGAGTCAGG 262 consensus_15008#1 GTATAGTCACATGATAGTCCATAGGCTTATACAGAACCATATATTCTTCAATGTATGTAA 322 * ** * * ** * ** * ** ** ** * consensus_15008#0 CTCATGGAGAATAGATAATTTAAGCTTGAAAGTTATCCATGGACAGTTGAATACACCTCC 409 consensus_15008#2 CTCATGGAGAATNNNTAATTTAAGCTTGAAAGTTATCCATGGACAGTTGAATACACCTCC 322 consensus_15008#1 ATCTGGTATACTAATGGTTACAATTTTAATGATTATGTACAGTAATACTTCTGCTTCTAC 382 ** * * * * * ** ** * **** * * * * * ** * consensus_15008#0 AGATCTGGAGGAAACACCTGA---ACTCAAGTTCAATGGTCTGCAGTACACATTTGACAA 466 consensus_15008#2 NNNTCTGGANNAAACACCTGA---ACTCAAGTTCANTGGTCTGCNNTACACATTTGACAA 379 consensus_15008#1 CAGAATATATTATATTATTGGCGTATATAAATCCGGTACTA-ATGATTCAAATGTAATAA 441 * * * * ** * ** * * * * * ** ** * * ** consensus_15008#0 ACTCAGCATGCTGCTTGGAGAGGATGGAGCTTCAGTTGTGGAAGCAAGACCTGTGGCTGT 526 consensus_15008#2 ACTNNNNATGCTGCTTGGNNNNNAT----------------------------------- 404 consensus_15008#1 TTACCATGTATGAATAGAAATCGCTTTGGTAAAAAAAA---------------------- 479 * * * * consensus_15008#0 CACTGATCTCACGGGAATAAGCCTTTCTGATCTCCAAGAGGGGCAATTATCCTCAGCAAG 586 consensus_15008#2 ------------------------------------------------------------ consensus_15008#1 ------------------------------------------------------------ consensus_15008#0 CACAGCTTCAAGCATCCTTGAAATGAAAGAGGATGGCTTGAAAGAGTATGCTGACCTCAA 646 consensus_15008#2 ------------------------------------------------------------ consensus_15008#1 ------------------------------------------------------------ consensus_15008#0 GCAGTCGCTGCTGCTCTACGATCTTGCTATTGTGATAACAGGTTTCTCTGCCTTCACCTT 706 consensus_15008#2 ------------------------------------------------------------ consensus_15008#1 ------------------------------------------------------------ consensus_15008#0 GGCTTCAAATGACAGTGCTGCCCTCTCGTTCCTTGTTGGAGGCATTGGAGGATTTCTCTA 766 consensus_15008#2 ------------------------------------------------------------ consensus_15008#1 ------------------------------------------------------------ consensus_15008#0 TCTGTTGCTGCTCCAAAAATCTGTAGACGGGTTGCCGGCGCTTAATTCACCATCAGAAGC 826 consensus_15008#2 ------------------------------------------------------------ consensus_15008#1 ------------------------------------------------------------ consensus_15008#0 TGGCAGTGCCCAGCCCTCTGTGAAAGGTTTCAGTGGCATAAGGAGGCCATGGTTAATATT 886 consensus_15008#2 ------------------------------------------------------------ consensus_15008#1 ------------------------------------------------------------ consensus_15008#0 GTCACTGTTAATGGTCGCTGGAGCTGTTGCATTGAAATATGGAGCGGGTGGTGACAAACT 946 consensus_15008#2 ------------------------------------------------------------ consensus_15008#1 ------------------------------------------------------------ consensus_15008#0 TGAAATGACGCCAGTCGAGCTCTTTGTTGGCACTGCAGGGTTCCTGGCGAACAAGGTTGC 1006 consensus_15008#2 ------------------------------------------------------------ consensus_15008#1 ------------------------------------------------------------ consensus_15008#0 CATTGTTCTCGCGGCATTCAAACCCTTGCAGAGTAATTTGAAGGCTGAAGACCGATCTGG 1066 consensus_15008#2 ------------------------------------------------------------ consensus_15008#1 ------------------------------------------------------------ consensus_15008#0 AGACTGAACATAGTCAGGCTGCCTTGAATATACTAACATTTATATAGCGGCTATACAGTA 1126 consensus_15008#2 ------------------------------------------------------------ consensus_15008#1 ------------------------------------------------------------ consensus_15008#0 TCATGATCTGAATGTTAATTATCGAAGTGCCTAGTTCAAGTTTCCAGAGGGAACTTGAGC 1186 consensus_15008#2 ------------------------------------------------------------ consensus_15008#1 ------------------------------------------------------------ consensus_15008#0 CTTATCTCTAGCTCACAAGCACAGCTGCCGATCACAAATGCTCTTCTTGAATCGTAAGCA 1246 consensus_15008#2 ------------------------------------------------------------ consensus_15008#1 ------------------------------------------------------------ consensus_15008#0 TTTCTTTAAGGGTTCAACTCGGATATGAATTTTTCATCTGAAGTATACCGAAACTTCACT 1306 consensus_15008#2 ------------------------------------------------------------ consensus_15008#1 ------------------------------------------------------------ consensus_15008#0 GATTTCACATCACAGGCATGGAGATTGGCAGTGTGGCCTATATCAACATTCCAGACATTT 1366 consensus_15008#2 ------------------------------------------------------------ consensus_15008#1 ------------------------------------------------------------ consensus_15008#0 GAACAGATCCAAATGATAATCTAGGTGACATAGTATAGATGTATAGTCACATGATAGTGC 1426 consensus_15008#2 ------------------------------------------------------------ consensus_15008#1 ------------------------------------------------------------ consensus_15008#0 CATAGGCTTATAGCAGAACAATATATTCTTCAATGTATGTAAATCTGGTATACTAATGGT 1486 consensus_15008#2 ------------------------------------------------------------ consensus_15008#1 ------------------------------------------------------------ consensus_15008#0 TACAATTTTAATGATTATGTAGCAGTAATACTGCTGCTTCTAGCAGAATATATTATATTA 1546 consensus_15008#2 ------------------------------------------------------------ consensus_15008#1 ------------------------------------------------------------ consensus_15008#0 TTGGTGTATATAAATCCGGTACTAATGATTCAAATGTAATAATTACAATGTATGAATAGA 1606 consensus_15008#2 ------------------------------------------------------------ consensus_15008#1 ------------------------------------------------------------ consensus_15008#0 AATCGCTTTGG 1617 consensus_15008#2 ----------- consensus_15008#1 ----------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||