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Oryza sativa
cluster # 1501 cluster # 1501       Sequences # 2       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1501#0 length = 2807 sequences # 1  
consensus_1501#1 length = 2195 sequences # 1  

consensusID : consensus_1501#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2807
fasta sequence
                              [ACTCAAACCCAAACCCCTCTTCCTCTCCCATCTCCCAATCTTCGTCCTCTTCCTCTCCGTCTCGCCACCTCGCCGGTGTCCGCCGGTGCCGGTGGTGGTGCGGAATGGAGGAGGGGAGCTCGTCTGCGGCGGAGGAGCTGGCGCGGGGGTGGGTCATACTCGATCGCGTCGCGTGCGTGGACGACGAGGAAGATCCGCGGGAGGTCGCCCTCAACGTCGCCGAGCCGCCGCGTCTGTCGACGCTCACCGTGCCGGCCAAGTTCCACGCTCTCCCGAGCAACCCGGACGAGCTACCGTACGTCGCCGCCGCCGACCCCTTCGGCCTCCTCGTCCACACCGCGGCGAGCCCCTCCTGCGGCCTCAACCTCGACGACGACCCACCCGGTAGCTTCGCCGTGCTTCGCGAATTCCTCCCCGTCGGGGCCAGCAACCCCCACGAGGCCACCGGAATCGCCGAGCGTGTCCCGGAGCGAGTCGGCGGATCCGTGCCCCACATCTCCAACCTCAAGAACGTCGGCTTCCTCACCTCCCCTGGAACCGGCGGCAAGGACTACGCCATCGCTGAGTTGCAGATCGAGGCCGGCGCCGAACTCGCCAAGCTGATTGTCTTCCGTTCTGGAACTCCCGCTTGGGCAGTGAGTCGTCTCATCCGCCCTGATATGCCCGGACGAAGTAATTTGCACTGGGGGTGGCACAACGATGATGTCATTTCGTTCGATGGGAACCTTTGGTTTGTTAATCTGTGGAGGGGTCTCATCAGCTGCAACCCGTTCAGTGATCATCCTGTTCTGCAGTTTCACCAGCTCCCAGAGCATATCCCGATAGAAGACCAAAACAAATCACAGCGTGATATTGAGGCTGATCGCTGTGTCAGGGTTAGCAAAGAGAGATTGCGCTACGTGGAGATAACCCGTGTACACAATGCTCCAGTTGAGTCAACTACTGTTGTTGTTTGGGTGCTGATCTGCGGTCCGAGAAGCATGTCGTATTGGAAGACCAATTGCATGGCATTTCTTGGGGACATTTGGGAGAATGAGACCTACAAGGCAACGGGTTTGCCCAACCAGGTCCCAATCCTTGCAGGCATACACCCCAGCAACCCTGATTTGGTTTACTTCTTTCTGGAGCATCACCTGTTTGGCGTCAATCTGTACAAGAAGATGGTTATTCACTTTGTCGATGAACATTACCAGCTTTTGCAGCCAATTGTTCGCTCCCGCTCGCTGCAGCCACTCTCTTGGCACCAAGTACAGCTTTGGAAGCTACCTCCGTCACTTCACGCAGGTTCAATAGAACTGTCAGCACAGCACGCTAGTGACTTAGGTAACCTCCACCTGAAGGCTGCTCAGCTACGGCGTCAAGAACATGCTTTAAAGAGACGTGAAAAGATGATTGAGATGCGAGAGGAATCAGTGCAAGGATTGCACAAATCACTTTTGGCACCCGAGGAAAAGAAGGACGACTCTCGCTGGGATAAGGTCCAGATCGTGATTCTTGCCGTACTGATATCTGGACTTTCCCTTCTGTTCCCATTCCTACCTTGGCTCCCCTATGAGTATCTCAGCACAATAGTGATAGCATTTAGCATTGTAGTGGGTTGCTGCTGCATTGCTCTGCCTTGTGCTCTTTTTGGCTCAAACAAGTGGCAGACTTGCTGTGGAGAGAGTGTTGCACGACTCCGGCTGACCCAGGGTTTGCATGGAAATTGATGAGGACCTACGAAGCACTTGCAGTTGTAGTAACATCGGGACAGGTCATCTCTTGGGTTTTGAGTTGTTGCTGTGGAAAGACATAGATGACCAGGAAGTATTCAGAGGTACATACTTTGGAGGTTGGTTTCTGGATCACAAAGTACCCATATCCGTAGTGAAGGTAGCAAGTTTTGACACGGGAGTTGAGATTTACTGACCAAGGATATCCATTTTTCGTTTTAGGACTTGGATATTGTTTTTTGGGCCACGGTATCACATTTTAGTGCTCTGTAGCATTCCCTTTTGAAGAATTGGATGATACTGTTACATTACAAATCATCAATCAATAACTCCCCTAACCATCCCCTTTTTCTCCGATTTTTCATTTTTTTTCTGGCTATCTGGTTGTTTTACACGTCTCCGTTTACTGTTATCTGCTCCTCGGCCTAATCTGCATGCTTATGCGTTGCCGGTGCGCCGGTTGGCTGCTTGATTATACCGGTTAATTACGTATTTAGTTTGTTCATTTGGGGTGTGGTTGCCGGTCATTGTGACGGTTGTTTCCGGTTGGCTGGTGCGTTGAGTGACGCGTGCCATGCTGTCATTTTTTGTTTTGATCTACTTGTTTCTTCTGTTATTTCAGATCGGTCTATCGGTTATGCATTCTGTGCCTTTGTGACTTTTTGTTTAGGTCCTTGCTATTGTTGAAAATTGAATGTGAAGAAGACAAAATTCTGTTTTTGGGGTGTGTTTGTGGTTTCTTCTTTTGCTGGGTATGGAGGTGCGATTTTCCCCATCTGCAGTCTTCCGTTCTGGGCGCGCGTCTTCGTGCTCTCCGGTGAGAGCGACATGGGCGGCCGCGGCGGCGTCCACCACCGGCGCTGGGACGGTGTAGTGCCGCCCTAGTACCTTTACCATCCAAGCCTTTCCAACATTGCAATGTTACCAGTCTGAAGCTTTCTAACAATAGCACGGCATAGAAATATTATCTCTCTGAGGATGAATCATTTTACTCAACTAAGGATGGATCGTCATGGTTCCCTTTCTATTTCTCTTTTGGTCCTATGTATATACGCAAACTGGAAAGGAAACGGAGATCTATGTATATATGGTGGT]

[+] EMBL AK119309             [ACTCAAACCCAAACCCCTCTTCCTCTCCCATCTCCCAATCTTCGTCCTCTTCCTCTCCGTCTCGCCACCTCGCCGGTGTCCGCCGGTGCCGGTGGTGGTGCGGAATGGAGGAGGGGAGCTCGTCTGCGGCGGAGGAGCTGGCGCGGGGGTGGGTCATACTCGATCGCGTCGCGTGCGTGGACGACGAGGAAGATCCGCGGGAGGTCGCCCTCAACGTCGCCGAGCCGCCGCGTCTGTCGACGCTCACCGTGCCGGCCAAGTTCCACGCTCTCCCGAGCAACCCGGACGAGCTACCGTACGTCGCCGCCGCCGACCCCTTCGGCCTCCTCGTCCACACCGCGGCGAGCCCCTCCTGCGGCCTCAACCTCGACGACGACCCACCCGGTAGCTTCGCCGTGCTTCGCGAATTCCTCCCCGTCGGGGCCAGCAACCCCCACGAGGCCACCGGAATCGCCGAGCGTGTCCCGGAGCGAGTCGGCGGATCCGTGCCCCACATCTCCAACCTCAAGAACGTCGGCTTCCTCACCTCCCCTGGAACCGGCGGCAAGGACTACGCCATCGCTGAGTTGCAGATCGAGGCCGGCGCCGAACTCGCCAAGCTGATTGTCTTCCGTTCTGGAACTCCCGCTTGGGCAGTGAGTCGTCTCATCCGCCCTGATATGCCCGGACGAAGTAATTTGCACTGGGGGTGGCACAACGATGATGTCATTTCGTTCGATGGGAACCTTTGGTTTGTTAATCTGTGGAGGGGTCTCATCAGCTGCAACCCGTTCAGTGATCATCCTGTTCTGCAGTTTCACCAGCTCCCAGAGCATATCCCGATAGAAGACCAAAACAAATCACAGCGTGATATTGAGGCTGATCGCTGTGTCAGGGTTAGCAAAGAGAGATTGCGCTACGTGGAGATAACCCGTGTACACAATGCTCCAGTTGAGTCAACTACTGTTGTTGTTTGGGTGCTGATCTGCGGTCCGAGAAGCATGTCGTATTGGAAGACCAATTGCATGGCATTTCTTGGGGACATTTGGGAGAATGAGACCTACAAGGCAACGGGTTTGCCCAACCAGGTCCCAATCCTTGCAGGCATACACCCCAGCAACCCTGATTTGGTTTACTTCTTTCTGGAGCATCACCTGTTTGGCGTCAATCTGTACAAGAAGATGGTTATTCACTTTGTCGATGAACATTACCAGCTTTTGCAGCCAATTGTTCGCTCCCGCTCGCTGCAGCCACTCTCTTGGCACCAAGTACAGCTTTGGAAGCTACCTCCGTCACTTCACGCAGGTTCAATAGAACTGTCAGCACAGCACGCTAGTGACTTAGGTAACCTCCACCTGAAGGCTGCTCAGCTACGGCGTCAAGAACATGCTTTAAAGAGACGTGAAAAGATGATTGAGATGCGAGAGGAATCAGTGCAAGGATTGCACAAATCACTTTTGGCACCCGAGGAAAAGAAGGACGACTCTCGCTGGGATAAGGTCCAGATCGTGATTCTTGCCGTACTGATATCTGGACTTTCCCTTCTGTTCCCATTCCTACCTTGGCTCCCCTATGAGTATCTCAGCACAATAGTGATAGCATTTAGCATTGTAGTGGGTTGCTGCTGCATTGCTCTGCCTTGTGCTCTTTTTGGCTCAAACAAGTGGCAGACTTGCTGTGGAGAGAGTGTTGCACGACTCCGGCTGACCCAGGGTTTGCATGGAAATTGATGAGGACCTACGAAGCACTTGCAGTTGTAGTAACATCGGGACAGGTCATCTCTTGGGTTTTGAGTTGTTGCTGTGGAAAGACATAGATGACCAGGAAGTATTCAGAGGTACATACTTTGGAGGTTGGTTTCTGGATCACAAAGTACCCATATCCGTAGTGAAGGTAGCAAGTTTTGACACGGGAGTTGAGATTTACTGACCAAGGATATCCATTTTTCGTTTTAGGACTTGGATATTGTTTTTTGGGCCACGGTATCACATTTTAGTGCTCTGTAGCATTCCCTTTTGAAGAATTGGATGATACTGTTACATTACAAATCATCAATCAATAACTCCCCTAACCATCCCCTTTTTCTCCGATTTTTCATTTTTTTTCTGGCTATCTGGTTGTTTTACACGTCTCCGTTTACTGTTATCTGCTCCTCGGCCTAATCTGCATGCTTATGCGTTGCCGGTGCGCCGGTTGGCTGCTTGATTATACCGGTTAATTACGTATTTAGTTTGTTCATTTGGGGTGTGGTTGCCGGTCATTGTGACGGTTGTTTCCGGTTGGCTGGTGCGTTGAGTGACGCGTGCCATGCTGTCATTTTTTGTTTTGATCTACTTGTTTCTTCTGTTATTTCAGATCGGTCTATCGGTTATGCATTCTGTGCCTTTGTGACTTTTTGTTTAGGTCCTTGCTATTGTTGAAAATTGAATGTGAAGAAGACAAAATTCTGTTTTTGGGGTGTGTTTGTGGTTTCTTCTTTTGCTGGGTATGGAGGTGCGATTTTCCCCATCTGCAGTCTTCCGTTCTGGGCGCGCGTCTTCGTGCTCTCCGGTGAGAGCGACATGGGCGGCCGCGGCGGCGTCCACCACCGGCGCTGGGACGGTGTAGTGCCGCCCTAGTACCTTTACCATCCAAGCCTTTCCAACATTGCAATGTTACCAGTCTGAAGCTTTCTAACAATAGCACGGCATAGAAATATTATCTCTCTGAGGATGAATCATTTTACTCAACTAAGGATGGATCGTCATGGTTCCCTTTCTATTTCTCTTTTGGTCCTATGTATATACGCAAACTGGAAAGGAAACGGAGATCTATGTATATATGGTGGT]


>consensus_1501#0 ACTCAAACCCAAACCCCTCTTCCTCTCCCATCTCCCAATCTTCGTCCTCTTCCTCTCCGT CTCGCCACCTCGCCGGTGTCCGCCGGTGCCGGTGGTGGTGCGGAATGGAGGAGGGGAGCT CGTCTGCGGCGGAGGAGCTGGCGCGGGGGTGGGTCATACTCGATCGCGTCGCGTGCGTGG ACGACGAGGAAGATCCGCGGGAGGTCGCCCTCAACGTCGCCGAGCCGCCGCGTCTGTCGA CGCTCACCGTGCCGGCCAAGTTCCACGCTCTCCCGAGCAACCCGGACGAGCTACCGTACG TCGCCGCCGCCGACCCCTTCGGCCTCCTCGTCCACACCGCGGCGAGCCCCTCCTGCGGCC TCAACCTCGACGACGACCCACCCGGTAGCTTCGCCGTGCTTCGCGAATTCCTCCCCGTCG GGGCCAGCAACCCCCACGAGGCCACCGGAATCGCCGAGCGTGTCCCGGAGCGAGTCGGCG GATCCGTGCCCCACATCTCCAACCTCAAGAACGTCGGCTTCCTCACCTCCCCTGGAACCG GCGGCAAGGACTACGCCATCGCTGAGTTGCAGATCGAGGCCGGCGCCGAACTCGCCAAGC TGATTGTCTTCCGTTCTGGAACTCCCGCTTGGGCAGTGAGTCGTCTCATCCGCCCTGATA TGCCCGGACGAAGTAATTTGCACTGGGGGTGGCACAACGATGATGTCATTTCGTTCGATG GGAACCTTTGGTTTGTTAATCTGTGGAGGGGTCTCATCAGCTGCAACCCGTTCAGTGATC ATCCTGTTCTGCAGTTTCACCAGCTCCCAGAGCATATCCCGATAGAAGACCAAAACAAAT CACAGCGTGATATTGAGGCTGATCGCTGTGTCAGGGTTAGCAAAGAGAGATTGCGCTACG TGGAGATAACCCGTGTACACAATGCTCCAGTTGAGTCAACTACTGTTGTTGTTTGGGTGC TGATCTGCGGTCCGAGAAGCATGTCGTATTGGAAGACCAATTGCATGGCATTTCTTGGGG ACATTTGGGAGAATGAGACCTACAAGGCAACGGGTTTGCCCAACCAGGTCCCAATCCTTG CAGGCATACACCCCAGCAACCCTGATTTGGTTTACTTCTTTCTGGAGCATCACCTGTTTG GCGTCAATCTGTACAAGAAGATGGTTATTCACTTTGTCGATGAACATTACCAGCTTTTGC AGCCAATTGTTCGCTCCCGCTCGCTGCAGCCACTCTCTTGGCACCAAGTACAGCTTTGGA AGCTACCTCCGTCACTTCACGCAGGTTCAATAGAACTGTCAGCACAGCACGCTAGTGACT TAGGTAACCTCCACCTGAAGGCTGCTCAGCTACGGCGTCAAGAACATGCTTTAAAGAGAC GTGAAAAGATGATTGAGATGCGAGAGGAATCAGTGCAAGGATTGCACAAATCACTTTTGG CACCCGAGGAAAAGAAGGACGACTCTCGCTGGGATAAGGTCCAGATCGTGATTCTTGCCG TACTGATATCTGGACTTTCCCTTCTGTTCCCATTCCTACCTTGGCTCCCCTATGAGTATC TCAGCACAATAGTGATAGCATTTAGCATTGTAGTGGGTTGCTGCTGCATTGCTCTGCCTT GTGCTCTTTTTGGCTCAAACAAGTGGCAGACTTGCTGTGGAGAGAGTGTTGCACGACTCC GGCTGACCCAGGGTTTGCATGGAAATTGATGAGGACCTACGAAGCACTTGCAGTTGTAGT AACATCGGGACAGGTCATCTCTTGGGTTTTGAGTTGTTGCTGTGGAAAGACATAGATGAC CAGGAAGTATTCAGAGGTACATACTTTGGAGGTTGGTTTCTGGATCACAAAGTACCCATA TCCGTAGTGAAGGTAGCAAGTTTTGACACGGGAGTTGAGATTTACTGACCAAGGATATCC ATTTTTCGTTTTAGGACTTGGATATTGTTTTTTGGGCCACGGTATCACATTTTAGTGCTC TGTAGCATTCCCTTTTGAAGAATTGGATGATACTGTTACATTACAAATCATCAATCAATA ACTCCCCTAACCATCCCCTTTTTCTCCGATTTTTCATTTTTTTTCTGGCTATCTGGTTGT TTTACACGTCTCCGTTTACTGTTATCTGCTCCTCGGCCTAATCTGCATGCTTATGCGTTG CCGGTGCGCCGGTTGGCTGCTTGATTATACCGGTTAATTACGTATTTAGTTTGTTCATTT GGGGTGTGGTTGCCGGTCATTGTGACGGTTGTTTCCGGTTGGCTGGTGCGTTGAGTGACG CGTGCCATGCTGTCATTTTTTGTTTTGATCTACTTGTTTCTTCTGTTATTTCAGATCGGT CTATCGGTTATGCATTCTGTGCCTTTGTGACTTTTTGTTTAGGTCCTTGCTATTGTTGAA AATTGAATGTGAAGAAGACAAAATTCTGTTTTTGGGGTGTGTTTGTGGTTTCTTCTTTTG CTGGGTATGGAGGTGCGATTTTCCCCATCTGCAGTCTTCCGTTCTGGGCGCGCGTCTTCG TGCTCTCCGGTGAGAGCGACATGGGCGGCCGCGGCGGCGTCCACCACCGGCGCTGGGACG GTGTAGTGCCGCCCTAGTACCTTTACCATCCAAGCCTTTCCAACATTGCAATGTTACCAG TCTGAAGCTTTCTAACAATAGCACGGCATAGAAATATTATCTCTCTGAGGATGAATCATT TTACTCAACTAAGGATGGATCGTCATGGTTCCCTTTCTATTTCTCTTTTGGTCCTATGTA TATACGCAAACTGGAAAGGAAACGGAGATCTATGTATATATGGTGGT



consensusID : consensus_1501#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2195
fasta sequence
                              [ATCTTCCTCTCCGTATCATCAATCAAAAAAGAAAAAACGAAACTCCTCTCAAAAAAAAAAAAAAAAAACTCAAACCCAAACCCCTCTTCCTCTCCCATCTCCCAATCTTCGTCCTCTTCCTCTCCGTCTCGCCACCTCGCCGGTGTCCGCCGGTGCCGGTGGTGGTGCGGAATGGAGGAGGGGAGCTCGTCTGCGGCGGAGGAGCTGGCGCGGGGGTGGGTCATACTCGATCGCGTCGCGTGCGTGGACGACGAGGAAGATCCGCGGGAGGTCGCCCTCAACGTCGCCGAGCCGCCGCGTCTGTCGACGCTCACCGTGCCGGCCAAGTTCCACGCTCTCCCGAGCAACCCGGACGAGCTACCGTACGTCGCCGCCGCCGACCCCTTCGGCCTCCTCGTCCACACCGCGGCGAGCCCCTCCTGCGGCCTCAACCTCGACGACGACCCACCCGGTAGCTTCGCCGTGCTTCGCGAATTCCTCCCCGTCGGGGCCAGCAACCCCCACGAGGCCACCGGAATCGCCGAGCGTGTCCCGGAGCGAGTCGGCGGATCCGTGCCCCACATCTCCAACCTCAAGAACGTCGGCTTCCTCACCTCCCCTGGAACCGGCGGCAAGGACTACGCCATCGCTGAGTTGCAGATCGAGGCCGGCGCCGAACTCGCCAAGCTGATTGTCTTCCGTTCTGGAACTCCCGCTTGGGCAGTGAGTCGTCTCATCCGCCCTGATATGCCCGGACGAAGTAATTTGCACTGGGGGTGGCACAACGATGATGTCATTTCGTTCGATGGGAACCTTTGGTTTGTTAATCTGTGGAGGGGTCTCATCAGCTGCAACCCGTTCAGTGATCATCCTGTTCTGCAGTTTCACCAGCTCCCAGAGCATATCCCGATAGAAGACCAAAACAAATCACAGCGTGATATTGAGGCTGATCGCTGTGTCAGGGTTAGCAAAGAGAGATTGCGCTACGTGGAGATAACCCGTGTACACAATGCTCCAGTTGAGTCAACTACTGTTGTTGTTTGGGTGCTGATCTGCGGTCCGAGAAGCATGTCGTATTGGAAGACCAATTGCATGGCATTTCTTGGGGACATTTGGGAGAATGAGACCTACAAGGGCAACGGGTTTGCCCAACCAGGTCCCAATCCTTGCAGGCATACACCCCAGCAACCCTGATTTGGTTTACTTCTTTCTGGAGCATCACCTGTTTGGCGTCAATCTGTACAAGAAGATGGTTATTCACTTTGTCGATGAACATTACCAGCTTTTGCAGCCAATTGTTCGCTCCCGCTCGCTGCAGCCACTCTCTTGGCACCAAGTACAGCTTTGGAAGCTACCTCCGTCACTTCACGCAGGTTCAATAGAACTGTCAGCACAGCACGCTAGTGACTTAGGTAACCTCCACCTGAAGGCTGCTCAGCTACGGCGTCAAGAACATGCTTTAAAGAGACGTGAAAAGATGATTGAGATGCGAGAGGAATCAGTGCAAGGATTGCACAAAATCACTTTTGGCACCCGAGGAAAAGAAGGACGACTCTCGCTGGGATAAGGTCCAGATCGTGATTCTTGCCGTACTGATATCTGGACTTTCCCTTCTGTTCCCATTCCTACCTTGGCTCCCCTATGAGTATCTCAGCACAATAGTGATAGCATTTAGCATTGTAGTGGGTTGCTGCTGCATTGCTCTGCCTTGTGCTCTTTTTGGCTCAAACAAGTGGCAGACTTGCTGTGGAGAGAGTGTTGCACGAGTAGGCTTCATGCTTTTTTCACTGTTTGTCTTGTACTGCCTGTATCGAATGGCACTTGATCCTACACTGGAGATGACTGGCCACTCTGCCCCCTCCAGCTCCGGCTGACCCAGGGTTTGCATGGAAATTGATGAGGACCTACGAAGCACTTGCAGTTGTAGTAACATCGGGACAGGTCATCTCTTGGGTTTTGAGTTGTTGCTGTGGAAAGACATAGATGACCAGGAAGTATTCAGAGGTTGGTTTCTGGATCACAAAGTATCCATATCCGTAGTGAAGGTAGCAAGTTTTGACACGGGAGTTGAGATTTACTGACCAAGGATATCCATTTTTCGTTTTAGGACTTGGATATTGTTTTTTGGGCCACGGTATCACATTTTAGTGCTCTGTAGCATTCCCTTTTGAAGAATTGAATGATACTGTTACATTACAAATCATCAATCAATAACT]

[+] EMBL AK120750             [ATCTTCCTCTCCGTATCATCAATCAAAAAAGAAAAAACGAAACTCCTCTCAAAAAAAAAAAAAAAAAACTCAAACCCAAACCCCTCTTCCTCTCCCATCTCCCAATCTTCGTCCTCTTCCTCTCCGTCTCGCCACCTCGCCGGTGTCCGCCGGTGCCGGTGGTGGTGCGGAATGGAGGAGGGGAGCTCGTCTGCGGCGGAGGAGCTGGCGCGGGGGTGGGTCATACTCGATCGCGTCGCGTGCGTGGACGACGAGGAAGATCCGCGGGAGGTCGCCCTCAACGTCGCCGAGCCGCCGCGTCTGTCGACGCTCACCGTGCCGGCCAAGTTCCACGCTCTCCCGAGCAACCCGGACGAGCTACCGTACGTCGCCGCCGCCGACCCCTTCGGCCTCCTCGTCCACACCGCGGCGAGCCCCTCCTGCGGCCTCAACCTCGACGACGACCCACCCGGTAGCTTCGCCGTGCTTCGCGAATTCCTCCCCGTCGGGGCCAGCAACCCCCACGAGGCCACCGGAATCGCCGAGCGTGTCCCGGAGCGAGTCGGCGGATCCGTGCCCCACATCTCCAACCTCAAGAACGTCGGCTTCCTCACCTCCCCTGGAACCGGCGGCAAGGACTACGCCATCGCTGAGTTGCAGATCGAGGCCGGCGCCGAACTCGCCAAGCTGATTGTCTTCCGTTCTGGAACTCCCGCTTGGGCAGTGAGTCGTCTCATCCGCCCTGATATGCCCGGACGAAGTAATTTGCACTGGGGGTGGCACAACGATGATGTCATTTCGTTCGATGGGAACCTTTGGTTTGTTAATCTGTGGAGGGGTCTCATCAGCTGCAACCCGTTCAGTGATCATCCTGTTCTGCAGTTTCACCAGCTCCCAGAGCATATCCCGATAGAAGACCAAAACAAATCACAGCGTGATATTGAGGCTGATCGCTGTGTCAGGGTTAGCAAAGAGAGATTGCGCTACGTGGAGATAACCCGTGTACACAATGCTCCAGTTGAGTCAACTACTGTTGTTGTTTGGGTGCTGATCTGCGGTCCGAGAAGCATGTCGTATTGGAAGACCAATTGCATGGCATTTCTTGGGGACATTTGGGAGAATGAGACCTACAAGGGCAACGGGTTTGCCCAACCAGGTCCCAATCCTTGCAGGCATACACCCCAGCAACCCTGATTTGGTTTACTTCTTTCTGGAGCATCACCTGTTTGGCGTCAATCTGTACAAGAAGATGGTTATTCACTTTGTCGATGAACATTACCAGCTTTTGCAGCCAATTGTTCGCTCCCGCTCGCTGCAGCCACTCTCTTGGCACCAAGTACAGCTTTGGAAGCTACCTCCGTCACTTCACGCAGGTTCAATAGAACTGTCAGCACAGCACGCTAGTGACTTAGGTAACCTCCACCTGAAGGCTGCTCAGCTACGGCGTCAAGAACATGCTTTAAAGAGACGTGAAAAGATGATTGAGATGCGAGAGGAATCAGTGCAAGGATTGCACAAAATCACTTTTGGCACCCGAGGAAAAGAAGGACGACTCTCGCTGGGATAAGGTCCAGATCGTGATTCTTGCCGTACTGATATCTGGACTTTCCCTTCTGTTCCCATTCCTACCTTGGCTCCCCTATGAGTATCTCAGCACAATAGTGATAGCATTTAGCATTGTAGTGGGTTGCTGCTGCATTGCTCTGCCTTGTGCTCTTTTTGGCTCAAACAAGTGGCAGACTTGCTGTGGAGAGAGTGTTGCACGAGTAGGCTTCATGCTTTTTTCACTGTTTGTCTTGTACTGCCTGTATCGAATGGCACTTGATCCTACACTGGAGATGACTGGCCACTCTGCCCCCTCCAGCTCCGGCTGACCCAGGGTTTGCATGGAAATTGATGAGGACCTACGAAGCACTTGCAGTTGTAGTAACATCGGGACAGGTCATCTCTTGGGTTTTGAGTTGTTGCTGTGGAAAGACATAGATGACCAGGAAGTATTCAGAGGTTGGTTTCTGGATCACAAAGTATCCATATCCGTAGTGAAGGTAGCAAGTTTTGACACGGGAGTTGAGATTTACTGACCAAGGATATCCATTTTTCGTTTTAGGACTTGGATATTGTTTTTTGGGCCACGGTATCACATTTTAGTGCTCTGTAGCATTCCCTTTTGAAGAATTGAATGATACTGTTACATTACAAATCATCAATCAATAACT]


>consensus_1501#1 ATCTTCCTCTCCGTATCATCAATCAAAAAAGAAAAAACGAAACTCCTCTCAAAAAAAAAA AAAAAAAACTCAAACCCAAACCCCTCTTCCTCTCCCATCTCCCAATCTTCGTCCTCTTCC TCTCCGTCTCGCCACCTCGCCGGTGTCCGCCGGTGCCGGTGGTGGTGCGGAATGGAGGAG GGGAGCTCGTCTGCGGCGGAGGAGCTGGCGCGGGGGTGGGTCATACTCGATCGCGTCGCG TGCGTGGACGACGAGGAAGATCCGCGGGAGGTCGCCCTCAACGTCGCCGAGCCGCCGCGT CTGTCGACGCTCACCGTGCCGGCCAAGTTCCACGCTCTCCCGAGCAACCCGGACGAGCTA CCGTACGTCGCCGCCGCCGACCCCTTCGGCCTCCTCGTCCACACCGCGGCGAGCCCCTCC TGCGGCCTCAACCTCGACGACGACCCACCCGGTAGCTTCGCCGTGCTTCGCGAATTCCTC CCCGTCGGGGCCAGCAACCCCCACGAGGCCACCGGAATCGCCGAGCGTGTCCCGGAGCGA GTCGGCGGATCCGTGCCCCACATCTCCAACCTCAAGAACGTCGGCTTCCTCACCTCCCCT GGAACCGGCGGCAAGGACTACGCCATCGCTGAGTTGCAGATCGAGGCCGGCGCCGAACTC GCCAAGCTGATTGTCTTCCGTTCTGGAACTCCCGCTTGGGCAGTGAGTCGTCTCATCCGC CCTGATATGCCCGGACGAAGTAATTTGCACTGGGGGTGGCACAACGATGATGTCATTTCG TTCGATGGGAACCTTTGGTTTGTTAATCTGTGGAGGGGTCTCATCAGCTGCAACCCGTTC AGTGATCATCCTGTTCTGCAGTTTCACCAGCTCCCAGAGCATATCCCGATAGAAGACCAA AACAAATCACAGCGTGATATTGAGGCTGATCGCTGTGTCAGGGTTAGCAAAGAGAGATTG CGCTACGTGGAGATAACCCGTGTACACAATGCTCCAGTTGAGTCAACTACTGTTGTTGTT TGGGTGCTGATCTGCGGTCCGAGAAGCATGTCGTATTGGAAGACCAATTGCATGGCATTT CTTGGGGACATTTGGGAGAATGAGACCTACAAGGGCAACGGGTTTGCCCAACCAGGTCCC AATCCTTGCAGGCATACACCCCAGCAACCCTGATTTGGTTTACTTCTTTCTGGAGCATCA CCTGTTTGGCGTCAATCTGTACAAGAAGATGGTTATTCACTTTGTCGATGAACATTACCA GCTTTTGCAGCCAATTGTTCGCTCCCGCTCGCTGCAGCCACTCTCTTGGCACCAAGTACA GCTTTGGAAGCTACCTCCGTCACTTCACGCAGGTTCAATAGAACTGTCAGCACAGCACGC TAGTGACTTAGGTAACCTCCACCTGAAGGCTGCTCAGCTACGGCGTCAAGAACATGCTTT AAAGAGACGTGAAAAGATGATTGAGATGCGAGAGGAATCAGTGCAAGGATTGCACAAAAT CACTTTTGGCACCCGAGGAAAAGAAGGACGACTCTCGCTGGGATAAGGTCCAGATCGTGA TTCTTGCCGTACTGATATCTGGACTTTCCCTTCTGTTCCCATTCCTACCTTGGCTCCCCT ATGAGTATCTCAGCACAATAGTGATAGCATTTAGCATTGTAGTGGGTTGCTGCTGCATTG CTCTGCCTTGTGCTCTTTTTGGCTCAAACAAGTGGCAGACTTGCTGTGGAGAGAGTGTTG CACGAGTAGGCTTCATGCTTTTTTCACTGTTTGTCTTGTACTGCCTGTATCGAATGGCAC TTGATCCTACACTGGAGATGACTGGCCACTCTGCCCCCTCCAGCTCCGGCTGACCCAGGG TTTGCATGGAAATTGATGAGGACCTACGAAGCACTTGCAGTTGTAGTAACATCGGGACAG GTCATCTCTTGGGTTTTGAGTTGTTGCTGTGGAAAGACATAGATGACCAGGAAGTATTCA GAGGTTGGTTTCTGGATCACAAAGTATCCATATCCGTAGTGAAGGTAGCAAGTTTTGACA CGGGAGTTGAGATTTACTGACCAAGGATATCCATTTTTCGTTTTAGGACTTGGATATTGT TTTTTGGGCCACGGTATCACATTTTAGTGCTCTGTAGCATTCCCTTTTGAAGAATTGAAT GATACTGTTACATTACAAATCATCAATCAATAACT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_1501#0      ------------------------------------------------------------
consensus_1501#1      ATCTTCCTCTCCGTATCATCAATCAAAAAAGAAAAAACGAAACTCCTCTCAAAAAAAAAA 60
                                                                                  

consensus_1501#0      -------ACTCAAACCCAAACCCCTCTTCCTCTCCCATCTCCCAATCTTCGTCCTCTTCC 53
consensus_1501#1      AAAAAAAACTCAAACCCAAACCCCTCTTCCTCTCCCATCTCCCAATCTTCGTCCTCTTCC 120
                             *****************************************************

consensus_1501#0      TCTCCGTCTCGCCACCTCGCCGGTGTCCGCCGGTGCCGGTGGTGGTGCGGAATGGAGGAG 113
consensus_1501#1      TCTCCGTCTCGCCACCTCGCCGGTGTCCGCCGGTGCCGGTGGTGGTGCGGAATGGAGGAG 180
                      ************************************************************

consensus_1501#0      GGGAGCTCGTCTGCGGCGGAGGAGCTGGCGCGGGGGTGGGTCATACTCGATCGCGTCGCG 173
consensus_1501#1      GGGAGCTCGTCTGCGGCGGAGGAGCTGGCGCGGGGGTGGGTCATACTCGATCGCGTCGCG 240
                      ************************************************************

consensus_1501#0      TGCGTGGACGACGAGGAAGATCCGCGGGAGGTCGCCCTCAACGTCGCCGAGCCGCCGCGT 233
consensus_1501#1      TGCGTGGACGACGAGGAAGATCCGCGGGAGGTCGCCCTCAACGTCGCCGAGCCGCCGCGT 300
                      ************************************************************

consensus_1501#0      CTGTCGACGCTCACCGTGCCGGCCAAGTTCCACGCTCTCCCGAGCAACCCGGACGAGCTA 293
consensus_1501#1      CTGTCGACGCTCACCGTGCCGGCCAAGTTCCACGCTCTCCCGAGCAACCCGGACGAGCTA 360
                      ************************************************************

consensus_1501#0      CCGTACGTCGCCGCCGCCGACCCCTTCGGCCTCCTCGTCCACACCGCGGCGAGCCCCTCC 353
consensus_1501#1      CCGTACGTCGCCGCCGCCGACCCCTTCGGCCTCCTCGTCCACACCGCGGCGAGCCCCTCC 420
                      ************************************************************

consensus_1501#0      TGCGGCCTCAACCTCGACGACGACCCACCCGGTAGCTTCGCCGTGCTTCGCGAATTCCTC 413
consensus_1501#1      TGCGGCCTCAACCTCGACGACGACCCACCCGGTAGCTTCGCCGTGCTTCGCGAATTCCTC 480
                      ************************************************************

consensus_1501#0      CCCGTCGGGGCCAGCAACCCCCACGAGGCCACCGGAATCGCCGAGCGTGTCCCGGAGCGA 473
consensus_1501#1      CCCGTCGGGGCCAGCAACCCCCACGAGGCCACCGGAATCGCCGAGCGTGTCCCGGAGCGA 540
                      ************************************************************

consensus_1501#0      GTCGGCGGATCCGTGCCCCACATCTCCAACCTCAAGAACGTCGGCTTCCTCACCTCCCCT 533
consensus_1501#1      GTCGGCGGATCCGTGCCCCACATCTCCAACCTCAAGAACGTCGGCTTCCTCACCTCCCCT 600
                      ************************************************************

consensus_1501#0      GGAACCGGCGGCAAGGACTACGCCATCGCTGAGTTGCAGATCGAGGCCGGCGCCGAACTC 593
consensus_1501#1      GGAACCGGCGGCAAGGACTACGCCATCGCTGAGTTGCAGATCGAGGCCGGCGCCGAACTC 660
                      ************************************************************

consensus_1501#0      GCCAAGCTGATTGTCTTCCGTTCTGGAACTCCCGCTTGGGCAGTGAGTCGTCTCATCCGC 653
consensus_1501#1      GCCAAGCTGATTGTCTTCCGTTCTGGAACTCCCGCTTGGGCAGTGAGTCGTCTCATCCGC 720
                      ************************************************************

consensus_1501#0      CCTGATATGCCCGGACGAAGTAATTTGCACTGGGGGTGGCACAACGATGATGTCATTTCG 713
consensus_1501#1      CCTGATATGCCCGGACGAAGTAATTTGCACTGGGGGTGGCACAACGATGATGTCATTTCG 780
                      ************************************************************

consensus_1501#0      TTCGATGGGAACCTTTGGTTTGTTAATCTGTGGAGGGGTCTCATCAGCTGCAACCCGTTC 773
consensus_1501#1      TTCGATGGGAACCTTTGGTTTGTTAATCTGTGGAGGGGTCTCATCAGCTGCAACCCGTTC 840
                      ************************************************************

consensus_1501#0      AGTGATCATCCTGTTCTGCAGTTTCACCAGCTCCCAGAGCATATCCCGATAGAAGACCAA 833
consensus_1501#1      AGTGATCATCCTGTTCTGCAGTTTCACCAGCTCCCAGAGCATATCCCGATAGAAGACCAA 900
                      ************************************************************

consensus_1501#0      AACAAATCACAGCGTGATATTGAGGCTGATCGCTGTGTCAGGGTTAGCAAAGAGAGATTG 893
consensus_1501#1      AACAAATCACAGCGTGATATTGAGGCTGATCGCTGTGTCAGGGTTAGCAAAGAGAGATTG 960
                      ************************************************************

consensus_1501#0      CGCTACGTGGAGATAACCCGTGTACACAATGCTCCAGTTGAGTCAACTACTGTTGTTGTT 953
consensus_1501#1      CGCTACGTGGAGATAACCCGTGTACACAATGCTCCAGTTGAGTCAACTACTGTTGTTGTT 1020
                      ************************************************************

consensus_1501#0      TGGGTGCTGATCTGCGGTCCGAGAAGCATGTCGTATTGGAAGACCAATTGCATGGCATTT 1013
consensus_1501#1      TGGGTGCTGATCTGCGGTCCGAGAAGCATGTCGTATTGGAAGACCAATTGCATGGCATTT 1080
                      ************************************************************

consensus_1501#0      CTTGGGGACATTTGGGAGAATGAGACCTACAAGG-CAACGGGTTTGCCCAACCAGGTCCC 1072
consensus_1501#1      CTTGGGGACATTTGGGAGAATGAGACCTACAAGGGCAACGGGTTTGCCCAACCAGGTCCC 1140
                      ********************************** *************************

consensus_1501#0      AATCCTTGCAGGCATACACCCCAGCAACCCTGATTTGGTTTACTTCTTTCTGGAGCATCA 1132
consensus_1501#1      AATCCTTGCAGGCATACACCCCAGCAACCCTGATTTGGTTTACTTCTTTCTGGAGCATCA 1200
                      ************************************************************

consensus_1501#0      CCTGTTTGGCGTCAATCTGTACAAGAAGATGGTTATTCACTTTGTCGATGAACATTACCA 1192
consensus_1501#1      CCTGTTTGGCGTCAATCTGTACAAGAAGATGGTTATTCACTTTGTCGATGAACATTACCA 1260
                      ************************************************************

consensus_1501#0      GCTTTTGCAGCCAATTGTTCGCTCCCGCTCGCTGCAGCCACTCTCTTGGCACCAAGTACA 1252
consensus_1501#1      GCTTTTGCAGCCAATTGTTCGCTCCCGCTCGCTGCAGCCACTCTCTTGGCACCAAGTACA 1320
                      ************************************************************

consensus_1501#0      GCTTTGGAAGCTACCTCCGTCACTTCACGCAGGTTCAATAGAACTGTCAGCACAGCACGC 1312
consensus_1501#1      GCTTTGGAAGCTACCTCCGTCACTTCACGCAGGTTCAATAGAACTGTCAGCACAGCACGC 1380
                      ************************************************************

consensus_1501#0      TAGTGACTTAGGTAACCTCCACCTGAAGGCTGCTCAGCTACGGCGTCAAGAACATGCTTT 1372
consensus_1501#1      TAGTGACTTAGGTAACCTCCACCTGAAGGCTGCTCAGCTACGGCGTCAAGAACATGCTTT 1440
                      ************************************************************

consensus_1501#0      AAAGAGACGTGAAAAGATGATTGAGATGCGAGAGGAATCAGTGCAAGGATTGCACAAA-T 1431
consensus_1501#1      AAAGAGACGTGAAAAGATGATTGAGATGCGAGAGGAATCAGTGCAAGGATTGCACAAAAT 1500
                      ********************************************************** *

consensus_1501#0      CACTTTTGGCACCCGAGGAAAAGAAGGACGACTCTCGCTGGGATAAGGTCCAGATCGTGA 1491
consensus_1501#1      CACTTTTGGCACCCGAGGAAAAGAAGGACGACTCTCGCTGGGATAAGGTCCAGATCGTGA 1560
                      ************************************************************

consensus_1501#0      TTCTTGCCGTACTGATATCTGGACTTTCCCTTCTGTTCCCATTCCTACCTTGGCTCCCCT 1551
consensus_1501#1      TTCTTGCCGTACTGATATCTGGACTTTCCCTTCTGTTCCCATTCCTACCTTGGCTCCCCT 1620
                      ************************************************************

consensus_1501#0      ATGAGTATCTCAGCACAATAGTGATAGCATTTAGCATTGTAGTGGGTTGCTGCTGCATTG 1611
consensus_1501#1      ATGAGTATCTCAGCACAATAGTGATAGCATTTAGCATTGTAGTGGGTTGCTGCTGCATTG 1680
                      ************************************************************

consensus_1501#0      CTCTGCCTTGTGCTCTTTTTGGCTCAAACAAGTGGCAGACTTGCTGTGGAGAGAGTGTTG 1671
consensus_1501#1      CTCTGCCTTGTGCTCTTTTTGGCTCAAACAAGTGGCAGACTTGCTGTGGAGAGAGTGTTG 1740
                      ************************************************************

consensus_1501#0      CACGA------------------------------------------------------- 1676
consensus_1501#1      CACGAGTAGGCTTCATGCTTTTTTCACTGTTTGTCTTGTACTGCCTGTATCGAATGGCAC 1800
                      *****                                                       

consensus_1501#0      -------------------------------------------CTCCGGCTGACCCAGGG 1693
consensus_1501#1      TTGATCCTACACTGGAGATGACTGGCCACTCTGCCCCCTCCAGCTCCGGCTGACCCAGGG 1860
                                                                 *****************

consensus_1501#0      TTTGCATGGAAATTGATGAGGACCTACGAAGCACTTGCAGTTGTAGTAACATCGGGACAG 1753
consensus_1501#1      TTTGCATGGAAATTGATGAGGACCTACGAAGCACTTGCAGTTGTAGTAACATCGGGACAG 1920
                      ************************************************************

consensus_1501#0      GTCATCTCTTGGGTTTTGAGTTGTTGCTGTGGAAAGACATAGATGACCAGGAAGTATTCA 1813
consensus_1501#1      GTCATCTCTTGGGTTTTGAGTTGTTGCTGTGGAAAGACATAGATGACCAGGAAGTATTCA 1980
                      ************************************************************

consensus_1501#0      GAGGTACATACTTTGGAGGTTGGTTTCTGGATCACAAAGTACCCATATCCGTAGTGAAGG 1873
consensus_1501#1      GAGGT---------------TGGTTTCTGGATCACAAAGTATCCATATCCGTAGTGAAGG 2025
                      *****               ********************* ******************

consensus_1501#0      TAGCAAGTTTTGACACGGGAGTTGAGATTTACTGACCAAGGATATCCATTTTTCGTTTTA 1933
consensus_1501#1      TAGCAAGTTTTGACACGGGAGTTGAGATTTACTGACCAAGGATATCCATTTTTCGTTTTA 2085
                      ************************************************************

consensus_1501#0      GGACTTGGATATTGTTTTTTGGGCCACGGTATCACATTTTAGTGCTCTGTAGCATTCCCT 1993
consensus_1501#1      GGACTTGGATATTGTTTTTTGGGCCACGGTATCACATTTTAGTGCTCTGTAGCATTCCCT 2145
                      ************************************************************

consensus_1501#0      TTTGAAGAATTGGATGATACTGTTACATTACAAATCATCAATCAATAACTCCCCTAACCA 2053
consensus_1501#1      TTTGAAGAATTGAATGATACTGTTACATTACAAATCATCAATCAATAACT---------- 2195
                      ************ *************************************          

consensus_1501#0      TCCCCTTTTTCTCCGATTTTTCATTTTTTTTCTGGCTATCTGGTTGTTTTACACGTCTCC 2113
consensus_1501#1      ------------------------------------------------------------
                                                                                  

consensus_1501#0      GTTTACTGTTATCTGCTCCTCGGCCTAATCTGCATGCTTATGCGTTGCCGGTGCGCCGGT 2173
consensus_1501#1      ------------------------------------------------------------
                                                                                  

consensus_1501#0      TGGCTGCTTGATTATACCGGTTAATTACGTATTTAGTTTGTTCATTTGGGGTGTGGTTGC 2233
consensus_1501#1      ------------------------------------------------------------
                                                                                  

consensus_1501#0      CGGTCATTGTGACGGTTGTTTCCGGTTGGCTGGTGCGTTGAGTGACGCGTGCCATGCTGT 2293
consensus_1501#1      ------------------------------------------------------------
                                                                                  

consensus_1501#0      CATTTTTTGTTTTGATCTACTTGTTTCTTCTGTTATTTCAGATCGGTCTATCGGTTATGC 2353
consensus_1501#1      ------------------------------------------------------------
                                                                                  

consensus_1501#0      ATTCTGTGCCTTTGTGACTTTTTGTTTAGGTCCTTGCTATTGTTGAAAATTGAATGTGAA 2413
consensus_1501#1      ------------------------------------------------------------
                                                                                  

consensus_1501#0      GAAGACAAAATTCTGTTTTTGGGGTGTGTTTGTGGTTTCTTCTTTTGCTGGGTATGGAGG 2473
consensus_1501#1      ------------------------------------------------------------
                                                                                  

consensus_1501#0      TGCGATTTTCCCCATCTGCAGTCTTCCGTTCTGGGCGCGCGTCTTCGTGCTCTCCGGTGA 2533
consensus_1501#1      ------------------------------------------------------------
                                                                                  

consensus_1501#0      GAGCGACATGGGCGGCCGCGGCGGCGTCCACCACCGGCGCTGGGACGGTGTAGTGCCGCC 2593
consensus_1501#1      ------------------------------------------------------------
                                                                                  

consensus_1501#0      CTAGTACCTTTACCATCCAAGCCTTTCCAACATTGCAATGTTACCAGTCTGAAGCTTTCT 2653
consensus_1501#1      ------------------------------------------------------------
                                                                                  

consensus_1501#0      AACAATAGCACGGCATAGAAATATTATCTCTCTGAGGATGAATCATTTTACTCAACTAAG 2713
consensus_1501#1      ------------------------------------------------------------
                                                                                  

consensus_1501#0      GATGGATCGTCATGGTTCCCTTTCTATTTCTCTTTTGGTCCTATGTATATACGCAAACTG 2773
consensus_1501#1      ------------------------------------------------------------
                                                                                  

consensus_1501#0      GAAAGGAAACGGAGATCTATGTATATATGGTGGT 2807
consensus_1501#1      ----------------------------------
                                                        




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)