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Oryza sativa
cluster # 1504 cluster # 1504       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1504#0 length = 2754 sequences # 2  

consensusID : consensus_1504#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2754
fasta sequence
                              [TAGATCAGGTTAATTATTAACATCACCCATTTCAATCCAACCTCGTGCCAATGGCGAGTCCTATGGAAGCTGTAGCCCGTTCCAGCCTCGTGCTCGCACCTCGCCGGCGGCGAGCCCTCGGCCTCCTCCCGGCGGCGGCGGCGGCCGCCCCATTCGTGCTAGATTGTCGCCGGCGGCATAACGGAGGAATGCGTCGTCCTCATGTCAGCTTCGCCTGCTCGGCCGAGCTCGACACCGGTCGCCGGCAGCTTCCTTCCACGGGGACTCGAGCGGTGATGTCGTCCTGTCCCGGATATGTTGAGGGGAGGATGGTAGGAGAAAATACAAGTCAGATAAACATGGGATGGGAGGCTAGAATACTTAGGCACTTGGAGAACCCGGAGTTCTTACCATCTTCATATGACATAGCATGGGTGGCTATGGTGCCATTGCCGGGCACTGATCATCTTCAAGCTCCATGCTTCCCTGAATGTGTGGAATGGATACTACAAAACCAACACAGTAATGGGTCGTGGGGTGTCAATGAATTTGACTCATCAGCCAGCAAGGATATTCTCCTATCCACTTTGGCATGTATTATTGCACTTGAGAAATGGAATGTCGGTTCGGAGCAAATAAGGAGAGGATTACATTTTATCGCAAAGAATTTCTCCATTGTTATTGATGACCAGATTGCTGCACCTATAGGCTTCAACCTCACATTCCCTGCTATGGTTAACCTTGCCATTAAGATGGGTTTGGAATTTCCTGCCAGTGAAATTAGTATTGATCAGATTCTTCACCTCCGTGATATGGAATTGAAAAGACTGGCTGGTGACGAATCTTTGGGGAAAGAGGCATATTTCGCCTATATTGCTGAAGGTCTAGAAGAAAGCATGGTGGATTGGAGTGAAGTTATGAAGTTCCAGGGGAAGAATGGATCATTGTTCAACTCCCCGGCTGCAACTGCTGCTGCATTAGTCCACAGATACGATGATAAAGCCCTGGGATACCTATATCTGTTGTCAATAAATTTGGAGGTGAAGTACCAACCGTGTATCCGCTAAATATATTTTCTCAGCTTTCAATGGTGGATACTCTCGTCAATATTGGAATATCTCGGCACTTTTCTAGTGATATAAAGCGCATTTTGGATAAGACATACATTTTATGGTCACAGAGAGATGAGGAAGTAATGCTGGATTTACCAACATGCGCAATGGCATTTCGCCTTTTGCGTATGAACGGATATGGTGTTTCCTCAGATGACTTGTCCCATGTTGCTGAAGCCTCAACTTTCCATAACTCAGTTGAAGGATACTTAGATGATACAAAATCCTTATTAGAATTGTACAAAGCTTCAAAAGTCAGTTTATCAGAAAATGAGCCAATCCTAGAGAAAATGGGTTGCTGGTCAGGTAGCTTATTGAAAGAAAAATTGTGCTCCGATGACATCCGAGGAACACCAATCCTTCGAGAGGTAGAATATGCTCTCAAATTTCCATTTTATGCCACGCTGGAACCTCTAGACCACAAGTGGAACATTGAAAATTTTGATGCCAGGGCTTATCAGAAGATAAAGACCAAAAACATGCCGTGCCATGTCAATGAAGATCTCTTGGCTTTGGCTGCTGAAGATTTCAGCTTTTGTCAGTCAACTTACCAAAATGAAATCCAGCACCTTGAAAGTTGGGAGAAAGAAAATAAGCTGGACCAGCTCGAATTTACGCGGAAGAATCTAATAAACAGCTATCTCTCTGCTGCTGCCACCATAAGCCCTTATGAATTGTCTGATGCTCGCATTGCGTGTGCAAAATCTATTGCGCTCACACTTGTTGCCGATGACTTTTTCGATGTCGGAAGTTCCAAAGAAGAACAAGAAAATCTCATATCCTTAGTCGAGAAGTGGGATCAGTATCACAAAGTTGAGTTCTACTCTGAGAATGTAAAAGCAGTATTTTTCGCTCTATATTCTACGGTTAACCAGCTTGGAGCAATGGCTTCCGCAGTACAGAACCGCGACGTTACAAAATACAATGTTGAATCGTGGTTGGATTATTTGAGGTCTTTAGCGACAGATGCAGAATGGCAACGGAGCAAATATGTGCCAACAATGGAGGAATACATGAAAAATTCAATTGTGACATTCGCATTGGGACCAACTATACTCATAGCACTGTATTTCATGGGACAAAATCTCTGGGAGGACATCGTGAAAAATGCAGAGTATGATGAGTTGTTTAGACTAATGAACACATGTGGTCGTCTCCAGAATGATATTCAAAGCTTTGAGAGGGAATGCGAGGATGGCAAACTGAACAGTGTGTCACTGCTTGTTCTTGACAGCAAAGATGTCATGTCAGTAGAAGAGGCTAAAGAGGCGATAAACGAGTCTATATCATCATGTAGAAGAGAGTTGCTACGGTTGGTTGTTAGAGAAGACGGTGTCATTCCTAAATCATGCAAGGAGATGTTCTGGAATCTTTACAAGACAAGCCATGTGTTCTACTCTCAGGCCGATGGATTTTCCTCGCCGAAGGAAATGATGGGTGCTATGAATGGAGTAATCTTTGAGCCACTGAAAACTAGAGGCAACTAGTCCATCTTAATTTGGCTGAGAAATTTTTAAAAAAAAGGTTTTCCTACGGTATCGCGAGACATCCGCTTTGTAACTCTAAGGTAGCTGCCGGTCTTATAGCCAGGCGAGAGTTGTAATATGAACCTTTTTCTCCTTAATACAATGATATACAAGCCTTTTACATATTAAAAAAAAAA]

[+] EMBL AK119327             [TAGATCAGGTTAATTATTAACATCACCCATTTCAATCCAACCTCGTGCCAATGGCGAGTCCTATGGAAGCTGTAGCCCGTTCCAGCCTCGTGCTCGCACCTCGCCGGCGGCGAGCCCTCGGCCTCCTCCCGGCGGCGGCGGCGGCCGCCCCATTCGTGCTAGATTGTCGCCGGCGGCATAACGGAGGAATGCGTCGTCCTCATGTCAGCTTCGCCTGCTCGGCCGAGCTCGACACCGGTCGCCGGCAGCTTCCTTCCACGGGGACTCGAGCGGTGATGTCGTCCTGTCCCGGATATGTTGAGGGGAGGATGGTAGGAGAAAATACAAGTCAGATAAACATGGGATGGGAGGCTAGAATACTTAGGCACTTGGAGAACCCGGAGTTCTTACCATCTTCATATGACATAGCATGGGTGGCTATGGTGCCATTGCCGGGCACTGATCATCTTCAAGCTCCATGCTTCCCTGAATGTGTGGAATGGATACTACAAAACCAACACAGTAATGGGTCGTGGGGTGTCAATGAATTTGACTCATCAGCCAGCAAGGATATTCTCCTATCCACTTTGGCATGTATTATTGCACTTGAGAAATGGAATGTCGGTTCGGAGCAAATAAGGAGAGGATTACATTTTATCGCAAAGAATTTCTCCATTGTTATTGATGACCAGATTGCTGCACCTATAGGCTTCAACCTCACATTCCCTGCTATGGTTAACCTTGCCATTAAGATGGGTTTGGAATTTCCTGCCAGTGAAATTAGTATTGATCAGATTCTTCACCTCCGTGATATGGAATTGAAAAGACTGGCTGGTGACGAATCTTTGGGGAAAGAGGCATATTTCGCCTATATTGCTGAAGGTCTAGAAGAAAGCATGGTGGATTGGAGTGAAGTTATGAAGTTCCAGGGGAAGAATGGATCATTGTTCAACTCCCCGGCTGCAACTGCTGCTGCATTAGTCCACAGATACGATGATAAAGCCCTGGGATACCTATATCTGTTGTCAATAAATTTGGAGGTGAAGTACCAACCGTGTATCCGCTAAATATATTTTCTCAGCTTTCAATGGTGGATACTCTCGTCAATATTGGAATATCTCGGCACTTTTCTAGTGATATAAAGCGCATTTTGGATAAGACATACATTTTATGGTCACAGAGAGATGAGGAAGTAATGCTGGATTTACCAACATGCGCAATGGCATTTCGCCTTTTGCGTATGAACGGATATGGTGTTTCCTCAGATGACTTGTCCCATGTTGCTGAAGCCTCAACTTTCCATAACTCAGTTGAAGGATACTTAGATGATACAAAATCCTTATTAGAATTGTACAAAGCTTCAAAAGTCAGTTTATCAGAAAATGAGCCAATCCTAGAGAAAATGGGTTGCTGGTCAGGTAGCTTATTGAAAGAAAAATTGTGCTCCGATGACATCCGAGGAACACCAATCCTTCGAGAGGTAGAATATGCTCTCAAATTTCCATTTTATGCCACGCTGGAACCTCTAGACCACAAGTGGAACATTGAAAATTTTGATGCCAGGGCTTATCAGAAGATAAAGACCAAAAACATGCCGTGCCATGTCAATGAAGATCTCTTGGCTTTGGCTGCTGAAGATTTCAGCTTTTGTCAGTCAACTTACCAAAATGAAATCCAGCACCTTGAAAGTTGGGAGAAAGAAAATAAGCTGGACCAGCTCGAATTTACGCGGAAGAATCTAATAAACAGCTATCTCTCTGCTGCTGCCACCATAAGCCCTTATGAATTGTCTGATGCTCGCATTGCGTGTGCAAAATCTATTGCGCTCACACTTGTTGCCGATGACTTTTTCGATGTCGGAAGTTCCAAAGAAGAACAAGAAAATCTCATATCCTTAGTCGAGAAGTGGGATCAGTATCACAAAGTTGAGTTCTACTCTGAGAATGTAAAAGCAGTATTTTTCGCTCTATATTCTACGGTTAACCAGCTTGGAGCAATGGCTTCCGCAGTACAGAACCGCGACGTTACAAAATACAATGTTGAATCGTGGTTGGATTATTTGAGGTCTTTAGCGACAGATGCAGAATGGCAACGGAGCAAATATGTGCCAACAATGGAGGAATACATGAAAAATTCAATTGTGACATTCGCATTGGGACCAACTATACTCATAGCACTGTATTTCATGGGACAAAATCTCTGGGAGGACATCGTGAAAAATGCAGAGTATGATGAGTTGTTTAGACTAATGAACACATGTGGTCGTCTCCAGAATGATATTCAAAGCTTTGAGAGGGAATGCGAGGATGGCAAACTGAACAGTGTGTCACTGCTTGTTCTTGACAGCAAAGATGTCATGTCAGTAGAAGAGGCTAAAGAGGCGATAAACGAGTCTATATCATCATGTAGAAGAGAGTTGCTACGGTTGGTTGTTAGAGAAGACGGTGTCATTCCTAAATCATGCAAGGAGATGTTCTGGAATCTTTACAAGACAAGCCATGTGTTCTACTCTCAGGCCGATGGATTTTCCTCGCCGAAGGAAATGATGGGTGCTATGAATGGAGTAATCTTTGAGCCACTGAAAACTAGAGGCAACTAGTCCATCTTAATTTGGCTGAGAAATTTTTAAAAAAAAGGTTTTCCTACGGTATCGCGAGACATCCGCTTTGTAACTCTAAGGTAGCTGCCGGTCTTATAGCCAGGCGAGAGTTGTAATATGAACCTTTTTCTCCTTAATACAATGATATACAAGCCT                    ]
[-] EMBL CA762741             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AATGGAGGAATACATGAAAAATTCAATTGTGCCATTCGCATTGGGACCACCTATACTCATAGCCCTGTATTTCATGGGACAAAATCTCTGGGAGGACATCGTGAAAAATGCAGAGTATGATGAGTTGTTTAGACTAATGAACACATGTGGTCGTCTCCAGAATGATATTCAAAGCTTTGAGAGGGAATGCAAGGATGGCAAACTGAACAGTGTGTCACTGCTTGTTCTTGACAGCAAAGATGTCATGTCAGTAGAAGAGGCTAAAGAGGCGATAAACGAGTCTATATCATCATGTAGAAGAGAGTTGCTACGGTTGGTTGTTAGAGAAGACGGTGTCATTCCTAAATCATGCAAGGAGATGTTCTGGAATCCTTACAAGACAAGCCATGTGTTCTACTCTCAGGCCGATGGATTTTCCTCGCCGAAGGAAATGATGGGTGCTATGAATGGAGTAATCTTTGAGCCACTGAAAACTAGAGGCAACTAGTCCATATTAATTTGGCTGAGAAA  TTAAAAAAAAAGGTTTTCCTACGGTATCGCGAGATATCCGCTTTGTAACTCTAAGGTAGCTGCCCGTTTTATAGCCAGGCGAGAGTTGTAATATGAACCTTTTTCTTCTTAATACAATGATATACAAGCGTTTTACATATTAAAAAAAAAA]


>consensus_1504#0 TAGATCAGGTTAATTATTAACATCACCCATTTCAATCCAACCTCGTGCCAATGGCGAGTC CTATGGAAGCTGTAGCCCGTTCCAGCCTCGTGCTCGCACCTCGCCGGCGGCGAGCCCTCG GCCTCCTCCCGGCGGCGGCGGCGGCCGCCCCATTCGTGCTAGATTGTCGCCGGCGGCATA ACGGAGGAATGCGTCGTCCTCATGTCAGCTTCGCCTGCTCGGCCGAGCTCGACACCGGTC GCCGGCAGCTTCCTTCCACGGGGACTCGAGCGGTGATGTCGTCCTGTCCCGGATATGTTG AGGGGAGGATGGTAGGAGAAAATACAAGTCAGATAAACATGGGATGGGAGGCTAGAATAC TTAGGCACTTGGAGAACCCGGAGTTCTTACCATCTTCATATGACATAGCATGGGTGGCTA TGGTGCCATTGCCGGGCACTGATCATCTTCAAGCTCCATGCTTCCCTGAATGTGTGGAAT GGATACTACAAAACCAACACAGTAATGGGTCGTGGGGTGTCAATGAATTTGACTCATCAG CCAGCAAGGATATTCTCCTATCCACTTTGGCATGTATTATTGCACTTGAGAAATGGAATG TCGGTTCGGAGCAAATAAGGAGAGGATTACATTTTATCGCAAAGAATTTCTCCATTGTTA TTGATGACCAGATTGCTGCACCTATAGGCTTCAACCTCACATTCCCTGCTATGGTTAACC TTGCCATTAAGATGGGTTTGGAATTTCCTGCCAGTGAAATTAGTATTGATCAGATTCTTC ACCTCCGTGATATGGAATTGAAAAGACTGGCTGGTGACGAATCTTTGGGGAAAGAGGCAT ATTTCGCCTATATTGCTGAAGGTCTAGAAGAAAGCATGGTGGATTGGAGTGAAGTTATGA AGTTCCAGGGGAAGAATGGATCATTGTTCAACTCCCCGGCTGCAACTGCTGCTGCATTAG TCCACAGATACGATGATAAAGCCCTGGGATACCTATATCTGTTGTCAATAAATTTGGAGG TGAAGTACCAACCGTGTATCCGCTAAATATATTTTCTCAGCTTTCAATGGTGGATACTCT CGTCAATATTGGAATATCTCGGCACTTTTCTAGTGATATAAAGCGCATTTTGGATAAGAC ATACATTTTATGGTCACAGAGAGATGAGGAAGTAATGCTGGATTTACCAACATGCGCAAT GGCATTTCGCCTTTTGCGTATGAACGGATATGGTGTTTCCTCAGATGACTTGTCCCATGT TGCTGAAGCCTCAACTTTCCATAACTCAGTTGAAGGATACTTAGATGATACAAAATCCTT ATTAGAATTGTACAAAGCTTCAAAAGTCAGTTTATCAGAAAATGAGCCAATCCTAGAGAA AATGGGTTGCTGGTCAGGTAGCTTATTGAAAGAAAAATTGTGCTCCGATGACATCCGAGG AACACCAATCCTTCGAGAGGTAGAATATGCTCTCAAATTTCCATTTTATGCCACGCTGGA ACCTCTAGACCACAAGTGGAACATTGAAAATTTTGATGCCAGGGCTTATCAGAAGATAAA GACCAAAAACATGCCGTGCCATGTCAATGAAGATCTCTTGGCTTTGGCTGCTGAAGATTT CAGCTTTTGTCAGTCAACTTACCAAAATGAAATCCAGCACCTTGAAAGTTGGGAGAAAGA AAATAAGCTGGACCAGCTCGAATTTACGCGGAAGAATCTAATAAACAGCTATCTCTCTGC TGCTGCCACCATAAGCCCTTATGAATTGTCTGATGCTCGCATTGCGTGTGCAAAATCTAT TGCGCTCACACTTGTTGCCGATGACTTTTTCGATGTCGGAAGTTCCAAAGAAGAACAAGA AAATCTCATATCCTTAGTCGAGAAGTGGGATCAGTATCACAAAGTTGAGTTCTACTCTGA GAATGTAAAAGCAGTATTTTTCGCTCTATATTCTACGGTTAACCAGCTTGGAGCAATGGC TTCCGCAGTACAGAACCGCGACGTTACAAAATACAATGTTGAATCGTGGTTGGATTATTT GAGGTCTTTAGCGACAGATGCAGAATGGCAACGGAGCAAATATGTGCCAACAATGGAGGA ATACATGAAAAATTCAATTGTGACATTCGCATTGGGACCAACTATACTCATAGCACTGTA TTTCATGGGACAAAATCTCTGGGAGGACATCGTGAAAAATGCAGAGTATGATGAGTTGTT TAGACTAATGAACACATGTGGTCGTCTCCAGAATGATATTCAAAGCTTTGAGAGGGAATG CGAGGATGGCAAACTGAACAGTGTGTCACTGCTTGTTCTTGACAGCAAAGATGTCATGTC AGTAGAAGAGGCTAAAGAGGCGATAAACGAGTCTATATCATCATGTAGAAGAGAGTTGCT ACGGTTGGTTGTTAGAGAAGACGGTGTCATTCCTAAATCATGCAAGGAGATGTTCTGGAA TCTTTACAAGACAAGCCATGTGTTCTACTCTCAGGCCGATGGATTTTCCTCGCCGAAGGA AATGATGGGTGCTATGAATGGAGTAATCTTTGAGCCACTGAAAACTAGAGGCAACTAGTC CATCTTAATTTGGCTGAGAAATTTTTAAAAAAAAGGTTTTCCTACGGTATCGCGAGACAT CCGCTTTGTAACTCTAAGGTAGCTGCCGGTCTTATAGCCAGGCGAGAGTTGTAATATGAA CCTTTTTCTCCTTAATACAATGATATACAAGCCTTTTACATATTAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)