These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15161#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 803 fasta sequence [CCTTAAATGGAAACTGTGGCATATAAAATGGCATCAATGACACCCATATGTTGGTCGAAATATTTTCGTAAGCATAAAGAGGAATAATAATCATGAGATCTTTGCATCTTACATCAAATCAAAATAGCATTCTGGAGATCTTGAAAGGTCTGCAAAAACAATCCCAGGAAACATAACTAGTCTAAAGACAACTCATCTCACAAGGGGAGTGTTTATCTTTAGGTTTTCTTTTGTTGTGTCTGACATTCTAAACTAGCTTCTGATGCTTTTCAGTCTTCACGTTTCTCCTTTTCTAACTTCTGAAAATCACAAATGAACATGTCAGCATGCGACTCAAAAGCTCCACAACAACGTATTGCAAGATAAAGAGGGAAACCGCCTCAAACTGTAAATAACAAGAAGCTGATACCATATAGTTCATTTCAAAACATATTTCAACCACACACCATGATTAATTGAAGCAGTGATATAAACCACAAAATCATTACCCAGATTCCATGCTTACCTCGTTATCTGAAATCATTAACCAGATTCCATGTTATCTGAATTAACATCAGCAGATTAAGTCTAGCATCCATTGGGTTTAACATCACAACGATTTCCTATCAGACAACAGTTGACTGGATGATTTACTGAAATAAAAATGGACTTATGCACTAAGTTTCTTGATGAGGAAAACTGATTTGGTTGTTCTGGGATGCAATATTCATGCCAAAAGTTGTAGGATCCATTTTTCGTTTGACTTAGATTCACCAAAAGCCAACAATCCTTTCACAAAACTGATGGAATGATTAACCTTTACC] [+] EMBL CB661849 [CCTTAAATGGAAACTGTGGCATATAAAATGGCATCAATGACACCCATATGTTGGTCGAAATATTTTCGTAAGCATAAAGAGGAATAATAATCATGAGATCTTTGCATCTTACATCAAATCAAAATAGCATTCTGGAGATCTTGAAAGGTCTGCAAAAACAATCCCAGGAAACATAACTAGTCTAAAGACAACTCATCTCACAAGGGGAGTGTTTATCTTTAGGTTTTCTTTTGTTGTGTCTGACATTCTAAACTAGCTTCTGATGCTTTTCAGTCTTCACGTTTCTCCTTTTCTAACTTCTGAAAATCACAAATGAACATGTCAGCATGCGACTCAAAAGCTCCACAACAACGTATTGCAAGATAAAGAGGGAAACCGCCTCAAACTGTAAATAACAAGAAGCTGATACCATATAGTTCATTTCAAAACATATTTCAACCACACACCATGATTAATTGAAGCAGTGATATAAACCACAAAATCATTACCCAGATTCCATGCTTACCTCGTTATCTGAAATCATTAACCAGATTCCATGTTATCTGAATTAACATCAGCAGATTAAGTCTAGCATCCATTGGGTTTAACATCACAACGATTTCCTATCAGACAACAGTTGACTGGATGATTTACTGAAATAAAAATGGACTTATGCACTAAGTTTCTTGATGAGGAAAACTGATTTGGTTGTTCTGGGATGCAATATTCATGCCAAAAGTTGTAGGATCCATTTTTCGTTTGACTTAGATTCACCAAAAGCCAACAATCCTTTCACAAAACTGATGGAATGATTAACCTTTACC] consensusID : consensus_15161#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 769 fasta sequence [GGCATCCCGGCGACGAGAGAGAGAGAGAGGGGAGAAGGCTGCGCGGCGGAGATGGCGGTGGCGGACGTGGCGTTCAAGGCGCTGACGGCGGGGCTCGGGGTGGCGACGCTCTACCTCGCCGGAACCTTCTCCGTCAACGTCTACCGCGGCCTCTCGTGGCACTCGGAGCAATCCGTAAGCAAAACCCTCGCCCGCCTCGACCACCAAACCCTTGACTTCTCCCCGCCGCTCGCTGGGGAGCCGCTGATTCGGGGTCCTTCTCCGACGATCTGGTGCTACTCGCTGCATCTCCCATGTCGAATCTCCCCCCTTCCTTTGGGCCTAGGACGAGGGTTTGGGTGGATATCCTTCGACCTTTGTTCTGTTGTTTTTTTTTTGCATCGACCCATGCCTGCCAAATTGGAACATGTTTGGCCCTTTGACTTGATGCGAGCACATATATTTTTGCGTGATGCTGCTGTACTGTGCAGGAGCTATCGGTGATTTCGTGTTGCTATCTAACTGCTGCTGCTTATTTCACTTTGATTAAGTTATCATTGGCTAATTAGCTTTGTAGACGCCAAGCTAGTGTTGATGTGAATTATAGTAGTGTAATGCAGCCACTTCTTGTTTTGTTGTGTTGTGCTTGGAAAGGTAGTCATGGTTTTAGGTTACAAACCTGTTGGATGCTCAAATACAACAAAACGAGTGATATAGCATTTTCGTGGTAGTTCTGAATTTTGACATGTTTANATAGAAATGGTTCATAAAACTATTCATCGGCTTCAAT] [+] EMBL CB661848 [GGCATCCCGGCGACGAGAGAGAGAGAGAGGGGAGAAGGCTGCGCGGCGGAGATGGCGGTGGCGGACGTGGCGTTCAAGGCGCTGACGGCGGGGCTCGGGGTGGCGACGCTCTACCTCGCCGGAACCTTCTCCGTCAACGTCTACCGCGGCCTCTCGTGGCACTCGGAGCAATCCGTAAGCAAAACCCTCGCCCGCCTCGACCACCAAACCCTTGACTTCTCCCCGCCGCTCGCTGGGGAGCCGCTGATTCGGGGTCCTTCTCCGACGATCTGGTGCTACTCGCTGCATCTCCCATGTCGAATCTCCCCCCTTCCTTTGGGCCTAGGACGAGGGTTTGGGTGGATATCCTTCGACCTTTGTTCTGTTGTTTTTTTTTTGCATCGACCCATGCCTGCCAAATTGGAACATGTTTGGCCCTTTGACTTGATGCGAGCACATATATTTTTGCGTGATGCTGCTGTACTGTGCAGGAGCTATCGGTGATTTCGTGTTGCTATCTAACTGCTGCTGCTTATTTCACTTTGATTAAGTTATCATTGGCTAATTAGCTTTGTAGACGCCAAGCTAGTGTTGATGTGAATTATAGTAGTGTAATGCAGCCACTTCTTGTTTTGTTGTGTTGTGCTTGGAAAGGTAGTCATGGTTTTAGGTTACAAACCTGTTGGATGCTCAAATACAACAAAACGAGTGATATAGCATTTTCGTGGTAGTTCTGAATTTTGACATGTTTANATAGAAATGGTTCATAAAACTATTCATCGGCTTCAAT] consensusID : consensus_15161#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 568 fasta sequence [GATACGCTACTAACGGCATGACAGTGTTTTTTTTTTTTTTTTTTCCTACACAACCTTAAATGGAAACTGTGGCATATAAAATGGCATCAATGACACCCATATGTT-GGTCGAAATATTTTCGTAAGCATAAAGAGGAATAATAATCATGA-GATCTTTGCATCTTACATCAAATC-AAAATAGCATTCTGG-AGATCTTGAAAGGTCTGCAAAAACAAT-CCCAGGAAACATAACTAGTCTAAAGACAACTCA--TCTCACAA-GGTG-AGTGTTTATC-TTTAGGTTTTCTTTTGTTGTGTCTGACATTCTAGACTAGCTTCTGATGCTTTTCAGTCTTCACGTTTCTCCTTTTCTAACTTGGATTGCTCCGAGTGCCACGAGAGGCCGCGGTAGACGTTGAC-GGAGAAGGTTCCGGCGAGGTAGAGCGTCGCCACCCCGAGCCCCGCCGTCAGCGCCTTGAACGCCACGTCCGCCACCGCCATCTCCGCCGCGCAGCCTTCTCCCCTCTCTCTCTCTCTCGTCGCCGGGATGC-CGGAG-CAG-ACGAGTAGTCTTCTCTGATTTTCTACTCCTTCAGT] [+] EMBL CF329545 [GATACGCTACTAACGGCATGACAGTGTTTTTTTTTTTTTTTTTTCCTACACAACCTTAAATGGAAACTGTGGCATATAAAATGGCATCAATGACACCCATATGTT GGTCGAAATATTTTCGTAAGCATAAAGAGGAATAATAATCATGA GATCTTTGCATCTTACATCAAATC AAAATAGCATTCTGG AGATCTTGAAAGGTCTGCAAAAACAAT CCCAGGAAACATAACTAGTCTAAAGACAACTCA TCTCACAA GGTG AGTGTTTATC TTTAGGTTTTCTTTTGTTGTGTCTGACATTCTAGACTAGCTTCTGATGCTTTTCAGTCTTCACGTTTCTCCTTTTCTAACTTGGATTGCTCCGAGTGCCACGAGAGGCCGCGGTAGACGTTGAC GGAGAAGGTTCCGGCGAGGTAAAGCGTCGCCACCCCGAGCCCCGCCGTCAGCGCCTTGAACGCCACGTCCGCCACCGCCATCTCCGCCGCGCAGCCTTCTCCCCTCTCTCTCTCTCTCGTCGCCGGGATGC CGGAG CAG ACGAGTAGTC ] [+] EMBL CF291447 [ TTTTTCCTACACAACCTTAAATGGAAACTGTGGCATATAAAATGGCATCAATGACACCCATATGTT GGTCGAAATATTTTCGTAAGCATAAAGAGGAATAATAATCATGA GATCTTTGCATCTTACATCAAATC AAAATAGCATTCTGG AGATCTTGAAAGGTCTGCAAAAACAAT CCCAGGAAACATAACTAGTCTAAAGACAACTCA TCTCACAAGGGTG AGTGTTTATCTTTTAGGTTTTCTTTTGTTGTGTCTGACATTCTAAACTAGCTTCTGATGCTTTTCAGTCTTCACGTTTCTCCTTTTCTAACTTGGATTGCTCCGAGTGCCACGAGAGGCCGCGGTAGACGTTGACGGGAAAAGGTTCCGGCGAGGTAAAGCGTCGCCACCCCGAGCCCCGCCGTCAGCGCCTTGAACGCCACGTCCGCCACCGCCATCTCCGCCGCGCAGCCTTCTCCCCTCTCTCTCTCTCTCGTCGCCGGGATGC CGGAG CAG ACGAGTAGTC ] [-] EMBL CF329544 [ CTGTGGCATATAAAATGGCATCAATGACACCCATATGTTGGGTCGAAATATTTTCGTAAGCATAAAGAGGAATAATAATCATGA GATCTTTGCATCTTACATCAAATC AAAATAGCATTCTGG AGATCTTGAAAGGTCTGCAAAAACAAT CCCAGGAAACATAACTAGTCTAAAGACAACTCA TCTCACAA GGTG AGTGTTTATC TTTAGGTTTTCTTTTGTTGTGTCTGACATTCTAGACTAGCTTCTGATGCTTTTCAGTCTTCACGTTTCTCCTTTTCTAACTTGGATTGCTCCGAGTGCCACGAGAGGCCGCGGTAGACGTTGAC GGAGAAGGTTCCGGCGAGGTAGAGCGTCGCCACCCCGAGCCCCGCCGTCAGCGCCTTGAACGCCACGTCCGCCACCGCCATCTCCGCCGCGCAGCCTTCTCCCCTCTCTCTCTCTCTCGTCGCCGGGATGC CGGAG CAG ACGAGTAGTCT ] [-] EMBL C99487 [ ttttTATAAAATGGCATCAATGACACCCATATGTT GGTCGAAATATTTTCGTAAGCATAAAGAGGAATAATAATCATGA GATCTTTGCATCTTACATCAAATC AAAATAGCATTCTGG AGATCTTGAAAGGTCTGCAAAAACAAT CCCAGGAAACATAACTAGTCTAAAGACAACTCA TCTCACAA GGTG AGTGTTTATC TTTAGGTTTTCTTTTGTTGTGTCTGACATTCTAGACTAGCTTCTGATGCTTTTCAGTCTTCACGTTTCTCCTTTTCTAACTTGGATTGCTCCGAGTGCCACGAGAGGCCGCGGTAGACGTTGAC GGAGAAGGTTCCGGCGAGGTAGAGCGTCGCCACCCCGAGCCCCGCCGTCAGCGCCTTGAACGCCACGTCCGCCACCGCCATCTCCGCCGCGCA CCTTCTCCCCTCTCTCTCTCTCTCGTCGCCG ] [-] EMBL AK058990 [ ATCAATGACACCCATATGTT GGTCGAAATATTTTCGTAAGCATAAAGAGGAATAATAATCATGA GATCTTTGCATCTTACATCAAATC AAAATAGCATTCTGG AGATCTTGAAAGGTCTGCAAAAACAAT CCCAGGAAACATAACTAGTCTAAAGACAACTCA TCTCACAA GGTG AGTGTTTATC TTTAGGTTTTCTTTTGTTGTGTCTGACATTCTAGACTAGCTTCTGATGCTTTTCAGTCTTCACGTTTCTCCTTTTCTAACTTGGATTGCTCCGAGTGCCACGAGAGGCCGCGGTAGACGTTGAC GGAGAAGGTTCCGGCGAGGTAGAGCGTCGCCACCCCGAGCCCCGCCGTCAGCGCCTTGAACGCCACGTCCGCCACCGCCATCTCCGCCGCGCAGCCTTCTCCCCTCTCTCTCTCTCTCGTCGCCGGGATGC CGGAG CAG ACGAGTA ] [-] EMBL CF314732 [ ttttTT GGTCGAAATATTTTCGTAAGCATAAAGAGGAATAATAATCATGA GATCTTTGCATCTTACATCAAATC AAAATAGCATTCTGG AGATCTTGAAAGGTCTGCAAAAACAAT CCCAGGAAACATAACTAGTCTAAAGACAACTCA TCTCACAA GGTG AGTGTTTATC TTTAGGTTTTCTTTTGTTGTGTCTGACATTCTAGACTAGCTTCTGATGCTTTTCAGTCTTCACGTTTCTCCTTTTCTAACTTGGATTGCTCCGAGTGCCACGAGAGGCCGCGGTAGACGTTGAC GGAGAAGGTTCCGGCGAGGTAGAGCGTCGCCACCCCGAGCCCCGCCGTCAGCGCCTTGAACGCCACGTCCGCCACCGCCATCTCCGCCGCGCAGCCTTCTCCCCTCTCACTCTCTCTCGTCGCCGGGATGC CGGAG CAG ACGAGTAGTCTTCTCTGAT ] [+] EMBL CF314733 [ tttttTT GGTCGAAATATTTTCGTAAGCATAAAGAGGAATAATAATCATGA GATCTTTGCATCTTACATCAAATC AAAATAGCATTCTGG AGATCTTGAAAGGTCTGCAAAAACAAT CCCAGGAAACATAACTAGTCTAAAGACAACTCA TCTCACAA GGTG AGTGTTTATC TTTAGGTTTTCTTTTGTTGTGTCTGACATTCTAGACTAGCTTCTGATGCTTTTCAGTCTTCACGTTTCTCCTTTTCTAACTTGGATTGCTCCGAGTGCCACGAGAGGCCGCGGTAGACGTTGAC GGAGAAGGTTCCGGCGAGGTAGAGCGTCGCCACCCCGAGCCCCGCCGTCAGCGCCTTGAACGCCACGTCCGCCACCGCCATCTCCGCCGCGCAGCCTTCTCCCCTCTCACTCTCTCTCGTCGCCGGGATGC CGGAG CAG ACGAGTAGTCTTCTCTGA ] [-] EMBL AU183928 [ tttttttTTTTCGTAAGCATAAAGAGGAATAATAATCATGA GATCTTTGCATCTTACATCAAATC AAAATAGCATTCTGG AGATCTTGAAAGGTCTGCAAAAACAAT CCCAGGAAACATAACTAGTCTAAAGACAACTCA TCTCACAA GGTG AGTGTTTATC TTTAGGTTTTCTTTTGTTGTGTCTGACATTCTAGACTAGCTTCTGATGCTTTTCAGTCTTCACGTTTCTCCTTTTCTAACTTGGATTGCTCCGAGTGCCACGAGAGGCCGCGGTAGACGTTGAC GGAGAAGGTTCCGGCGAGGTAGAGCGTCGCCACCCCGAGCCCCGCCGTCAGCGCCTTGAACGCCACGTCCGCCACCGCCATCTCCGCCGCGCAGCCTTCTCCCCTCTCT ] [-] EMBL AU162367 [ tttttttAGGAATAATAATCATGA GATCTTTGCATCTTACATCAAATC AAAATAGCATTCTGG AGATCTTGAAAGGTCTGCAAAAACAAT CCCAGGAAACATAACTAGTCTAAAGACAACTCA TCTCACAA GGTG AGTGTTTATC TTTAGGTTTTCTTTTGTTGTGTCTGACATTCTAGACTAGCTTCTGATGCTTTTCAGTCTTCACGTTTCTCCTTTTCTAACTTGGATTGCTCCGAGTGCCACGAGAGGCCGCGGTAGACGTTGAC GGAGAAGGTTCCGGCGAGGTAGAGCGTCGCCACCCCGAGCCCCGCCGTCAGCGCCTTGAACGCCACGTCCGCCACCGCCATCTCCGCCGCGCAGCCTTCTCCCCTCTCTCTCTCTCTCGTCGCCGGGATGC CGGAG ] [-] EMBL C73707 [ CATNAGGANC TTGCATCTTACATCAAATCAAAAATAGCATTCTGGAAGATCTTGAAAGGTCTGCAAAAACAATCCCCAGGAAACATAACTAGTCTAAAGACAACTCAATTCTCACAA GGTGAAGTGTTTATC TTTAGGTTTTCTTTTGTTGTGTCTGACATTCTAGACTAGCTTCTGATGCTTTTCAGTCTTCACGTTTCTCCTTTTCTAACTTGGATTGCTCCGAGTGCCACGAGAGGCCGCGGTAGACGTTGAC GGAGAAGGTTCCGGCGAGGTAGAGCGTCGCCACCCCGAGCCCCGCCGTCAGCGCCTTGAACGCCACGTCCGCCACCGCCATCTCCGCCGCGCAGCCTTCTCCCCTCTCTCTCTCTCTCGTCGCCGGGATGCNNGGAGCCAGNACGnangn ] [+] EMBL CA998334 [ ATCTTACATCAAATC AAAATAGCATTCTGG AGATCTTGAAAGGTCTGCAAAAACAAT CCCAGGAAACATAACTAGTCTAAAGACAACTCA TCTCACAA GGTG AGTGTTTATC TTTAGGTTTTCTTTTGTTGTGTCTGACATTCTAGACTAGCTTCTGATGCTTTTCAGTCTTCACGTTTCTCCTTTTCTAACTTGGATTGCTCCGAGTGCCACGAGAGGCCGCGGTAGACGTTGAC GGAGAAGGTTCCGGCGAGGTAGAGCGTCGCCACCCCGAGCCCCGCCGTCAGCGCCTTGAACGCCACG ] [-] EMBL CF313888 [ tttTTACATCAAATC AAAATAGCATTCTGG AGATCTTGAAAGGTCTGCAAAAACAAT CCCAGGAAACATAACTAGTCTAAAGACAACTCA TCTCACAA GGTG AGTGTTTATC TTTAGGTTTTCTTTTGTTGTGTCCGACATTCTAGACTAGCTTCTGATGCTTTTCAGTCTTCACGTTTCTCCTTTTCTAACTTGGATTGCTCCGAGTGCCACGAGAGGCCGCGGTAGACGTTGAC GGAGAAGGTTCCGGCGAGGTAGAGCGTCGCCACCCCGAGCCCCGCCGTCAGCGCCTTGAACGCCACGTCCGCCACCGCCATCTCCGCCGCGCAGCCTTCTCCCCTCTCTCTCTCTCTCGTCGCCGGGATGC CGGAG CAG ACGAGTAGTCTTCTCT ] [+] EMBL CF313887 [ ttttTTACATCAAATC AAAATAGCATTCTGG AGATCTTGAAAGGTCTGCAAAAACAAT CCCAGGAAACATAACTAGTCTAAAGACAACTCA TCTCACAA GGTG AGTGTTTATC TTTAGGTTTTCTTTTGTTGTGTCCGACATTCTAGACTAGCTTCTGATGCTTTTCAGTCTTCACGTTTCTCCTTTTCTAACTTGGATTGCTCCGAGTGCCACGAGAGGCCGCGGTAGACGTTGAC GGAAAAGGTTCCGGCGAGGTAAAGCGTCGCCACCCCGAGCCCCGCCGTCAGCGCCTTGAACGCCACGTCCGCCACCGCCATCTCCGCCGCGCAGCCTTCTCCCCTCTCTCTCTCTCTCGTCGCCGGGATGC CGGAG CAG ACGAGTAGTCTTCTC ] [-] EMBL CF301010 [ TCAAATC AAAATAGCATTCTGG AGATCTTGAAAGGTCTGCAAAAACAAT CCCAGGAAACATAACTAGTCTAAAGACAACTCA TCTCACAA GGTG AGTGTTTATC TTTAGGTTCTCTTTTGTTGTGTCTGACATTCTAGACTAGCTTCTGATGCTTTTCAGTCTTCACGTTTCTCCTTTTCTAACTTGGATTGCTCCGAGTGCCACGAGAGGCCGCGGTAGACGTTGAC GGAGAAGGTTCCGGCGAGGTAGAGCGTCGCCACCCCGAGCCCCGCCGTCAGCGCCTTGAACGCCACGTCCGCCACCGCCATCTCCGCCGCGCAGCCTTCTCCCCTCTCTCTCTCTCTCGTCGCCGGGATGC CGG ] [-] EMBL CF291448 [ CTAGCTTCTGATGCTTTTCAGTCTTCACGTTTCTCCTTTTCTAACTTGGATTGCTCCGAGTGCCACGAGAGGCCGCGGTAGACGTTGAC GGAGAAGGTTCCGGCGAGGTAGAGCGTCGCCACCCCGAGCCCCGCCGTCAGCGCCTTGAACGCCACGTCCGCCACCGCCATCTCCGCCGCGCAGCCTTCTCCCCTCTCTCTCTCTCTCGTCGCCGGGATGC CGGAG CAG ACGAGTAGTCTTCTCTGATTTTCTACTCCTTCAGT] consensusID : consensus_15161#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 203 fasta sequence [TTTTTTTTTTTTTTTCGTAANCATAAAGAGGAATAATAATCATGAGATCTTTNCATCTTACATCAAATCAAAATANCATTCTGGAGATCTTGAAAGGTCTGCAAAAACAATCCCAGGAAACATAANTAGTCTAAAGACAACTCATCTCACAAGGTGAGTGTTTATCTTTAGGTTTTCTTTTGTTGTGTCTGACATTCTAGACT] [-] EMBL AU164819 [TTTTTTTTTTTTTTTCGTAANCATAAAGAGGAATAATAATCATGAGATCTTTNCATCTTACATCAAATCAAAATANCATTCTGGAGATCTTGAAAGGTCTGCAAAAACAATCCCAGGAAACATAANTAGTCTAAAGACAACTCATCTCACAAGGTGAGTGTTTATCTTTAGGTTTTCTTTTGTTGTGTCTGACATTCTAGACT] consensusID : consensus_15161#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 115 fasta sequence [ATACGGTACGTAACGGCAAGACAGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATAATAATCATGAGATCTTTGCATCTTACATCAAATCAAAATAGCATT] [-] EMBL CF331090 [ATACGGTACGTAACGGCAAGACAGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATAATAATCATGAGATCTTTGCATCTTACATCAAATCAAAATAGCATT] [+] EMBL CF331089 [ TTTTTTTTTTTTTTTTTTTTTTTTTTTTAATAATAATCATGAAATCTTTGCATCTTACATCAAATCAAAATAGCAT ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_15161#2 GATACGCTACTAACGGCATGACAGTGTTTTTTTTTTTTTTTTTTCCTACACAACCTTAAA 60 consensus_15161#3 ------------------------------------------------------------ consensus_15161#0 -----------------------------------------------------CCTTAAA 7 consensus_15161#4 ------------------------------------------------------------ consensus_15161#1 --GGCATCCCGGCGACGAGAGAGAGAGAGAGGGGAGAAGGCTGCGCGGCGGAGATGGCGG 58 consensus_15161#2 TGGAAACTGTGGCATATAAAATGGCATCAATGACACCCAT--ATGTTGGTCGAAATATTT 118 consensus_15161#3 ----------------------------------------------TTTTTTTTTTTTTT 14 consensus_15161#0 TGGAAACTGTGGCATATAAAATGGCATCAATGACACCCAT--ATGTTGGTCGAAATATTT 65 consensus_15161#4 --------ATACGGTACGTAACGGCAA-GACAGTGTTTTT--TTTTTTTTTTTTTTTTTT 49 consensus_15161#1 TGGCGGACGTGGCGTTCAAGGCGCTGACGGCGGGGCTCGGGGTGGCGACGCTCTACCTCG 118 * consensus_15161#2 TCGTAAGCATAAAGAGGAATAATAATCATGAGATCTT-TGCATCTTACATCAAATCA-AA 176 consensus_15161#3 TCGTAANCATAAAGAGGAATAATAATCATGAGATCTT-TNCATCTTACATCAAATCA-AA 72 consensus_15161#0 TCGTAAGCATAAAGAGGAATAATAATCATGAGATCTT-TGCATCTTACATCAAATCA-AA 123 consensus_15161#4 TTTTTTTTTTTTTTTTTAATAATAATCATGAGATCTT-TGCATCTTACATCAAATCA-AA 107 consensus_15161#1 CCGGAACCTTCTCCGTCAACGTCTACCGCGGCCTCTCGTGGCACTCGGAGCAATCCGTAA 178 * ** * * * *** * ** * *** * ** consensus_15161#2 ATAGCATTCTGGAGATCTTGAAAGGTCTGCAAAAACAATCCCAGGAAACATAACTAGTCT 236 consensus_15161#3 ATANCATTCTGGAGATCTTGAAAGGTCTGCAAAAACAATCCCAGGAAACATAANTAGTCT 132 consensus_15161#0 ATAGCATTCTGGAGATCTTGAAAGGTCTGCAAAAACAATCCCAGGAAACATAACTAGTCT 183 consensus_15161#4 ATAGCATT---------------------------------------------------- 115 consensus_15161#1 GCAAAACCCTCGCCCGCCTCGACCACCAAACCCTTGACTTCTCCCCGCCGCTCGCTGGGG 238 * * consensus_15161#2 AAAGACAACTCATCTCACAAGGTGAGTGTTTATCTTTAGGTTTTCTTTTGTTGTGTCTGA 296 consensus_15161#3 AAAGACAACTCATCTCACAAGGTGAGTGTTTATCTTTAGGTTTTCTTTTGTTGTGTCTGA 192 consensus_15161#0 AAAGACAACTCATCTCACAAGGGGAGTGTTTATCTTTAGGTTTTCTTTTGTTGTGTCTGA 243 consensus_15161#4 ------------------------------------------------------------ consensus_15161#1 AGCCGCTGATTCGGGGTCCTTCTCCGACGATCTGGTGCTACTCGCTGCATCTCCCATGTC 298 consensus_15161#2 CATTCTAGACTAGCTTCTGATGCTTTTCAGTCTTCACGTTTCTCCTTTTCTAACTTGGAT 356 consensus_15161#3 CATTCTAGACT------------------------------------------------- 203 consensus_15161#0 CATTCTAAACTAGCTTCTGATGCTTTTCAGTCTTCACGTTTCTCCTTTTCTAACTT---- 299 consensus_15161#4 ------------------------------------------------------------ consensus_15161#1 GAATCTCCCCCCTTCCTTTGGGCCTAGGACGAGGGTTTGGGTGGATATCCTTCGACCTTT 358 consensus_15161#2 TGCTCCGAGTGCCACGAGAGGCCGCGGTAGACGTTGACGGAGAAGGTTC-CGGCGAGGTA 415 consensus_15161#3 ------------------------------------------------------------ consensus_15161#0 ----CTGAAAATCACAAATGAACATGTCAGCATGCGACTCAAAAGCTCCACAACAACGTA 355 consensus_15161#4 ------------------------------------------------------------ consensus_15161#1 GTTCTGTTGTTTTTTTTTTGCATCGACCCATGCCTGCCAAATTGGAACATGTTTGGCCCT 418 consensus_15161#2 GAGCGTCGCCACCCCGAGCCCCGCCGTCAGCGCCTTGAACGCCACGTCCGCCACCGCCAT 475 consensus_15161#3 ------------------------------------------------------------ consensus_15161#0 TTGCAAGATAAAGAGGGAAACCGCCTCAAACTGTAAATAACAAGAAGCTGATACCATATA 415 consensus_15161#4 ------------------------------------------------------------ consensus_15161#1 TTGACTTGATGCGAGCACATATATTTTTGCGTGATGCTGCTGTACTGTGCAGGAGCTATC 478 consensus_15161#2 CTCCGCCGCGCAGCCTTCTCC--CCTCTCTCTCTCTCTCGTCGCCGGGATGCCGGAGCAG 533 consensus_15161#3 ------------------------------------------------------------ consensus_15161#0 GTTCATTTCAAAACATATTTCAACCACACACCATGATTAATTGAAGCAGTGATATAAACC 475 consensus_15161#4 ------------------------------------------------------------ consensus_15161#1 GGTGATTTCGTGTTGCTATCTAACTGCTGCTGCTTATTTCACTTTGATTAAGTTATCATT 538 consensus_15161#2 ACGAGTAGTCTTCTCTGATTTTCTACTCCTTCAGT------------------------- 568 consensus_15161#3 ------------------------------------------------------------ consensus_15161#0 ACAAAATCATTACCCAGATTCCATGCTTACCTCGTTATCTGAAATCATTAACCAGATTCC 535 consensus_15161#4 ------------------------------------------------------------ consensus_15161#1 GGCTAATTAGCTTTGTAGACGCCAAGCTAGTGTTGATGTGAATTATAGTAGTGTAATGCA 598 consensus_15161#2 ------------------------------------------------------------ consensus_15161#3 ------------------------------------------------------------ consensus_15161#0 ATGTTATCTGAATTAACATCAGCAGATTAAGTCTAGCATCCATTGGGTTTAACATCACAA 595 consensus_15161#4 ------------------------------------------------------------ consensus_15161#1 GCCACTTCTTGTTTTGTTGTGTTGTGCTTGGAAAGGTAGTCATGGTTTTAGGTTACAAAC 658 consensus_15161#2 ------------------------------------------------------------ consensus_15161#3 ------------------------------------------------------------ consensus_15161#0 CGATTTCCTATCAGACAACAGTTGACTGGATGATTTACTGAAATAAAAATGGACTTATGC 655 consensus_15161#4 ------------------------------------------------------------ consensus_15161#1 CTGTTGGATGCTCAAATACAACAAAACGAGTGATATAGCATTTTCGTGGTAGTTCTGAAT 718 consensus_15161#2 ------------------------------------------------------------ consensus_15161#3 ------------------------------------------------------------ consensus_15161#0 ACTAAGTTTCTTGATGAGGAAAACTGATTTGGTTGTTCTGGGATGCAATATTCATGCCAA 715 consensus_15161#4 ------------------------------------------------------------ consensus_15161#1 TTTGACATGTTTANATAGAAATGGTTCATAAAACTATTCATCGGCTTCAAT--------- 769 consensus_15161#2 ------------------------------------------------------------ consensus_15161#3 ------------------------------------------------------------ consensus_15161#0 AAGTTGTAGGATCCATTTTTCGTTTGACTTAGATTCACCAAAAGCCAACAATCCTTTCAC 775 consensus_15161#4 ------------------------------------------------------------ consensus_15161#1 ------------------------------------------------------------ consensus_15161#2 ---------------------------- consensus_15161#3 ---------------------------- consensus_15161#0 AAAACTGATGGAATGATTAACCTTTACC 803 consensus_15161#4 ---------------------------- consensus_15161#1 ---------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||