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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15169#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 19 consensus length = 2063 fasta sequence
[ATCTCTGCCGCCCCGGTTTCCCATCTCCGCCCGCAGTAAACCCCTCCTCATTCCCACCACCACCTCTCCTCGGAGGAATCTTTGCTGCTTTCCTTTATATAAACCCCTCTCCAGTCTATACTTCCACTCCACACTCCCCTCCACCCCCCCCCCCACACCCGCAGCAGCAGGGAGAAGACGACGACGAAGATGATGGATCTCGCCGACCCAAACCACCGGCTCATCGCCGGCGCGGCGCTGCTGGTGGCCACCCTCGCCTTCATCAAGCTGCTGCTGAGCTCCGCCGGCGGCGGCAAGAAGCGCCTCCCGCCGACCATCCCGGCGGCGCCGCTGGTGGGCGGGCTGCTCCGCTTCATGCGGGGGCCGATCCCGATGATCCGGGAGGAGTACGCCCGCCTCGGCAGCGTCTTCACCGTCCCCATCCTCAGCCGCAAGATCACCTTCCTCATCGGCCCCGAGGTGTCGGCGCACTTCTTCAAGGGGAACGAGGCCGAGATGAGCCAGCAGGAGGTCTACAAGTTCAACGTGCCCACCTTCGGCCCCGGCGTCGTCTTCGACGTCGACTACTCCGTCAGGCAGGAGCAGTTCAGGTTCTTCACCGAGGCGCTCCGCGCCAACAAGCTCCGCAGCTATGTCGACCAGATGGTTGTCGAGGCTGAGGAGTACTTCTCTAAGTGGGGAGAAAGTGGAACGGTGGATCTGAAGTATGAGCTGGAGCATCTCATCATTCTGACTGCTAGTCGGTGCTTGCTCGGGA-GGGAGGTGCGAGAAAAGCTCTTTGATGATGTTTCTTCTCTCTTCCATGATCTGGACAATGGGATGCAGCCAGTCAGTGTCATCTTCCCCTACCTCCCAATTCCTGCACACCG-CCGCCGTGACCGGGCACGGCAACGGTTGAAGGAAATCTTCGCCACCATCATCAAGTCCCGCAAGGCCTCTGGACGGGCTGAGGAAGACATGCTGCAGTGCTTCATTGATTCGAAGTACAAGAGTGGACGCTCAACCACAGAAGGTGAAATAACCGGCCTACTTATTGCAGCACTATTTGCTGGACAGCACACTAGCTCTATCACCTCAACCTGGACTGGGGCCTACATGCTTCGCTTCAAGCAGTACTTCGCAGCAGCCGAAGAGGAGCAGAAGGAGGTCATGAAGCGGCACGGGGACAAGATCGATCATGACATCTTGGCAGAGATGGATGTCCTCTACAGGTGCATCAAGGAGGCGCTCCGTCTTCACCCACCGCTAATCATGCTGCTCCGCCAGTCACACAACGACTTCTCAGTGACAACGAAGGATGGCAAAGAGTTCGACATCCCGAAGGGCCACATCGTCGCGACATCTCCAGCCTTCGCCAACAGGCTCCCTCACATCTTCAAGAACCCCGACTCATACGACCCCGACCGCTACGCACCAGGCAGGGAGGAGGACAAGGCAGCGGGCGCCTTCTCGTACATCTCCTTTGGTGGCGGCAGGCA-CGGTTGCCTCGGTGAGCCCTTCGCCTACCTAC-AGATCAAGGCCATATGGACTCACCTGCTGAGGAACTTTGAGTTCGAGCTGGTCTCCCCCTTCCCGGAGACC-AACTGGAAAGCC-ATGGTCGTCGGCATCAAGGACG-AGGTGATGGTCAACTTCAAGCGGCGGAAGCTC-GTCGTC-GACAACTAGGATGCCACCTTCAACCTTAGGAGTCGATG-CTTGTCGCGCTTTTCGCC-TT-TTTTCTCTTCTTTTCCCTTTCTGTCAGTAT-TTGATCCGT-GT-AAG-TTTCT-GCCAGCTTTGT-ATT-AGGGTGT-TTCAGTCGT-TTTAGGATCCTGTGATT--TGCTTCCT-GCCATGAAAAATCAAGC-TTGATCTCT-GCAACTTCTGT-ACCTCTGGGTTGCTTGGCAACGATTTGTGTTTGTGTTATTAGACTTGAAGCATCCTGGATTGTACCTGAATCTTTGCATCGTCCGTTATTTCATATGGCTTTGGACATAATGTCTGAAGTCTGAACAAATAATACTTATATGTAATGGAATGGAAATGAGAATAAAACTATGGCAATGTGAGTTGTNTCAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AK121491 [ATCTCTGCCGCCCCGGTTTCCCATCTCCGCCCGCAGTAAACCCCTCCTCATTCCCACCACCACCTCTCCTCGGAGGAATCTTTGCTGCTTTCCTTTATATAAACCCCTCTCCAGTCTATACTTCCACTCCACACTCCCCTCCACCCCCCCCCCCACACCCGCAGCAGCAGGGAGAAGACGACGACGAAGATGATGGATCTCGCCGACCCAAACCACCGGCTCATCGCCGGCGCGGCGCTGCTGGTGGCCACCCTCGCCTTCATCAAGCTGCTGCTGAGCTCCGCCGGCGGCGGCAAGAAGCGCCTCCCGCCGACCATCCCGGCGGCGCCGCTGGTGGGCGGGCTGCTCCGCTTCATGCGGGGGCCGATCCCGATGATCCGGGAGGAGTACGCCCGCCTCGGCAGCGTCTTCACCGTCCCCATCCTCAGCCGCAAGATCACCTTCCTCATCGGCCCCGAGGTGTCGGCGCACTTCTTCAAGGGGAACGAGGCCGAGATGAGCCAGCAGGAGGTCTACAAGTTCAACGTGCCCACCTTCGGCCCCGGCGTCGTCTTCGACGTCGACTACTCCGTCAGGCAGGAGCAGTTCAGGTTCTTCACCGAGGCGCTCCGCGCCAACAAGCTCCGCAGCTATGTCGACCAGATGGTTGTCGAGGCTGAGGAGTACTTCTCTAAGTGGGGAGAAAGTGGAACGGTGGATCTGAAGTATGAGCTGGAGCATCTCATCATTCTGACTGCTAGTCGGTGCTTGCTCGGGA GGGAGGTGCGAGAAAAGCTCTTTGATGATGTTTCTTCTCTCTTCCATGATCTGGACGATGGGATGCAGCCAGTCAGTGTCATCTTCCCCTACCTCCCAATTCCTGCACACCG CCGCCGTGACCGGGCACGGCAACGGTTGAAGGAAATCTTCGCCACCATCATCAAGTCCCGCAAGGCCTCTGGACGGGCTGAGGAAGACATGCTGCAGTGCTTCATTGATTCGAAGTACAAGAGTGGACGCTCAACCACAGAAGGTGAAATAACCGGCCTACTTATTGCAGCACTATTTGCTGGACAGCACACTAGCTCTATCACCTCAACCTGGACTGGGGCCTACATGCTTCGCTTCAAGCAGTACTTCGCAGCAGCCGAAGAGGAGCAGAAGGAGGTCATGAAGCGGCACGGGGACAAGATCGATCATGACATCTTGGCAGAGATGGATGTCCTCTACAGGTGCATCAAGGAGGCGCTCCGTCTTCACCCACCGCTAATCATGCTGCTCCGCCAGTCACACAACGACTTCTCAGTGACAACGAAGGATGGCAAAGAGTTCGACATCCCGAAGGGCCACATCGTCGCGACATCTCCAGCCTTCGCCAACAGGCTCCCTCACATCTTCAAGAACCCCGACTCATACGACCCCGACCGCTACGCACCAGGCAGGGAGGAGGACAAGGCAACGGGCGCCTTCTCGTACATCTCCTTTGGTGGCGGCAGGCA CGGTTGCCTCGGTGAGCCCTTCGCCTACCTAC AGATCAAGGCCATATGGACTCACCTGCTGAGGAACTTTGAGTTCGAGCTGGTCTCCCCCTTCCCGGAGACC AACTGGAAAGCC ATGGTCGTCGGCATCAAGGACG AGGTGATGGTCAACTTCAAGCGGCGGAAGCTC GTCGTC GACAACTAGGATGCCACCTTCAACCTTAGGAGTCGATG CTTGTCGCGCTTTTCGCC TT TTTTCTCTTCTTTTCCCTTTCTGTCAGTAT TTGATCCGT GT AAG TTTCT GCCAGCTTTGT ATT AGGGTGT TTCAGTCGT TTTAGGATCCTGTGATT TGCTTCCT GCCATGAAAAATCAAGC TTGATCTCT GCAACTTCTGT ACCTCTGGGTTGCTTGGCAACGATTTGTGTTTGTGTTATTAGACTTGAAGCATCCTGGATTGTACCTGAATCTTTGCATCGTCCGTTATTTCATATGGCTTTGGACATAATGTCTGAAGTCTGAACAAATAATACTTATATGTAATGGAATGGAAATGAGAATAAAACTATGGCAATGTGAG ]
[+] EMBL AK060487 [ CCCTCCACCCCCCCCCCCACACCCGCAGCAGCAGGGAGAAGACGACGACGAAGATGATGGATCTCGCCGACCCAAACCACCGGCTCATCGCCGGCGCGGCGCTGCTGGTGGCCACCCTCGCCTTCATCAAGCTGCTGCTGAGCTCCGCCGGCGGCGGCAAGAAGCGCCTCCCGCCGACCATCCCGGCGGCGCCGCTGGTGGGCGGGCTGCTCCGCTTCATGCGGGGGCCGATCCCGATGATCCGGGAGGAGTACGCCCGCCTCGGCAGCGTCTTCACCGTCCCCATCCTCAGCCGCAAGATCACCTTCCTCATCGGCCCCGAGGTGTCGGCGCACTTCTTCAAGGGGAACGAGGCCGAGATGAGCCAGCAGGAGGTCTACAAGTTCAACGTGCCCACCTTCGGCCCCGGCGTCGTCTTCGACGTCGACTACTCCGTCAGGCAGGAGCAGTTCAGGTTCTTCACCGAGGCGCTCCGCGCCAACAAGCTCCGCAGCTATGTCGACCAGATGGTTGTCGAGGCTGAGGAGTACTTCTCTAAGTGGGGAGAAAGTGGAACGGTGGATCTGAAGTATGAGCTGGAGCATCTCATCATTCTGACTGCTAGTCGGTGCTTGCTCGGGA GGGAGGTGCGAGAAAAGCTCTTTGATGATGTTTCTTCTCTCTTCCATGATCTGGACAATGGGATGCAGCCAGTCAGTGTCATCTTCCCCTACCTCCCAATTCCTGCACACCG CCGCCGTGACCGGGCACGGCAACGGTTGAAGGAAATCTTCGCCACCATCATCAAGTCCCGCAAGGCCTCTGGACGGGCTGAGGAAGACATGCTGCAGTGCTTCATTGATTCGAAGTACAAGAGTGGACGCTCAACCACAGAAGGTGAAATAACCGGCCTACTTATTGCAGCACTATTTGCTGGACAGCACACTAGCTCTATCACCTCAACCTGGACTGGGGCCTACATGCTTCGCTTCAAGCAGTACTTCGCAGCAGCCGAAGAGGAGCAGAAGGAGGTCATGAAGCGGCACGGGGACAAGATCGATCATGACATCTTGGCAGAGATGGATGTCCTCTACAGGTGCATCAAGGAGGCGCTCCGTCTTCACCCACCGCTAATCATGCTGCTCCGCCAGTCACACAACGACTTCTCAGTGACAACGAAGGATGGCAAAGAGTTCGACATCCCGAAGGGCCACATCGTCGCGACATCTCCAGCCTTCGCCAACAGGCTCCCTCACATCTTCAAGAACCCCGACTCATACGACCCCGACCGCTACGCACCAGGCAGGGAGGAGGACAAGGCAGCGGGCGCCTTCTCGTACATCTCCTTTGGTGGCGGCAGGCA CGGTTGCCTCGGTGAGCCCTTCGCCTACCTAC AGATCAAGGCCATATGGACTCACCTGCTGAGGAACTTTGAGTTCGAGCTGGTCTCCCCCTTCCCGGAGACC AACTGGAAAGCC ATGGTCGTCGGCATCAAGGACG AGGTGATGGTCAACTTCAAGCGGCGGAAGCTC GTCGTC GACAACTAGGATGCCACCTTCAACCTTAGGAGTCGATG CTTGTCGCGCTTTTCGCC TT TTTTCTCTTCTTTTCCCTTTCTGTCAGTAT TTGATCCGT GT AAG TTTCT GCCAGCTTTGT ATT AGGGTGT TTCAGTCGT TTTAGGATCCTGTGATT TGCTTCCT GCCATGAAAAATCAAGC TTGATCTCT GCAACTTCTGT ACCTCTGGGTTGCTTGGCAACGATTTGTGTTTGTGTTATTAGACTTGAAGCATCCTGGATTGTACCT ]
[+] EMBL CF322902 [ gCCCGATGATCCGGGAGGAGTACGCCCGCCTCGGCAGCGTCTTCACCGTCCCCATCCTCAGCCGCAAGATCACCTTCCTCATCGGCCCCTATGTGTCGGCGCACTTCTTCAAGGGGAACGAGGCCGAGATGAGCCAGCAGGAGGTCTACAAGTTCAACGTGCCCACCTTCGGCCCCGGCGTCGTCTTCGACGTCGACTACTCCGTCAGGCAGGAGCAGTTCAGGTTCTTCACCGAGGCGCTCCGCGCCAACAAGCTCCGCAGCTATGTCGACCAGATGGTTGTCGAGGCTGAGGAGTACTTCTCTAAGTGGGGAGAAAGTGGAACAGTGGATCTGAAGTATGAGCTGGAGCATCTCATCATTCTGACTGCTAGTCGGTGCTTGCTCGGGA GGGAGGTGCGAGAAAAGCTCTTTGATGATGTTTCTGCTCTCTTCCATGATCTGGACAATGGGATGCAGCCAGTCAGTGTCATC ]
[+] EMBL CF323919 [ gCCCGATGATCCGGGAGGAGTACGCCCGCCTCGGCAGCGTCTTCACCGTCCCCATCCTCAGCCGCAAGATCACCTTCCTCATCGGCCCCGAGGTGTCGGCGCACTTCTTCAAGGGGAACGAGGCCGAGATGAGCCAGCAGGAGGTCTACAAGTTCAACGTGCCCACCTTCGGCCCCGGCGTCGTCTTCGACGTCGACTACTCCGTCAGGCAGGAGCAGTTCAGGTTCTTCACCGAGGCGCTCCGCGCCAACAAGCTCCGCAGCTATGTCGACCAGATGGTTGTCGAGGCTGAGGAGTACTTCTCTAAGTGGGGAGAAAGTGGAACAGTGGATCTGAAGTATGAGCTGGAGCATCTCATCATTCTGACTGCTAGTCGGTGCTTGCTCGGGAGGGGAGGTGCGAGAAAAGCTCTTTGATGATGTTTCTGCTCTCTTCCATGATCTGGACAATGGGATGCAGCCAGTCAGTGTCATCTTCCCCTACCTCCCAATTCCTGCACACCGNCCGCCGTGACCGGGCACGGCAACGATTGAAGGAAATCTTCGCCACCATCATCAAGTCCCGCAAGGCCTCTGGACAGGCTGAGGAAGACATGCTG ]
[+] EMBL AB025047 [ TACGCCCGCCTCGGCAGCGTCTTCACCGTCCCCATCCTCAGCCGCAAGATCACCTTCCTCATCGGCCCCGAGGTGTCGGCGCACTTCTTCAAGGGGAACGAGGCCGAGATGAGCCAGCAGGAGGTCTACAAGTTCAACGTGCCCACCTTCGGCCCCGGCGTCGTCTTCGACGTCGACTACTCCGTCAGGCAGGAGCAGTTCAGGTTCTTCACCGAGGCGCTCCGCGCCAACAAGCTCCGCAGCTATGTCGACCAGATGGTTGTCGAGGCTGAGGAGTACTTCTCTAAGTGGGGAGAAAGTGGAACGGTGGATCTGAAGTATGAGCTGGAGCATCTCATCATTCTGACTGCTAGTCGGTGCTTGCTCGGGA GGGAGGTGCGAGAAAAGCTCTTTGATGATGTTTCTTCTCTCTTCCATGATCTGGACAATGGGATGCAGCCAGTCAGTGTCATCTTCCCCTACCTCCCAATTCCTGCACACCG CCGCCGTGACCGGGCACGGCAACGGTTGAAGGAAATCTTCGCCACCATCATCAAGTCCCGCAAGGCCTCTGGACGGGCTGAGGAAGACATGCTGCAGTGCTTCATTGATTCGAAGTACAAGAGTGGACGCTCAACCACAGAAGGTGAAATAACCGGCCTACTTATTGCAGCACTATTTGCTGGACAGCACACTAGCTCTATCACCTCAACCTGGACTGGGGCCTACATGCTTCGCTTCAAGCAGTACTTCGCAGCAGCCGAAGAGGAGCAGAAGGAGGTCATGAAGCGGCACGGGGACAAGATCGATCATGACATCTTGGCAGAGATGGATGTCCTCTACAGGTGCATCAAGGAGGCGCTCCGTCTTCACCCACCGCTAATCATGCTGCTCCGCCAGTCACACAACGACTTCTCAGTGACAACGAAGGATGGCAAAGAGTTCGACATCCCGAAGGGCCACATCGTCGCGACATCTCCAGCCTTCGCCAACAGGCTCCCTCACATCTTCAAGAACCCCGACTCATACGACCCCGACCCGTACGCACCAGGCAGGGAGGAGGACAAGGCAGCGGGCGCCTTCTCGTACATCTCCTTTGGTGGCGGCAGGCA CGGTTGCCTCGGTGAGCCCTTCGCCTACCTAC AGATCAAGGCCATATGGACTCACCTGCTGAGGAACTTTGAGTTCGAGCTGGTCTCCCCCTTCCCGGAGACC AACTGGAAAGCC ATGGTCGTCGGCATCAAGGACG AGGTGATGGTCAACTTCAAGCGGCGGAAGCTC GTCGTC GACAACTAGGATGCCACCTTCAACCTTAGGAGTCGATG CTTGTCGCGCTTTTCGCCTTT TTTTCTCTTCTTTTCCCTTTCTGTCAGTAT TTGATCCGT GT AAG TTTCT GCCAGCTTTGT ATT AGGGTGT TTCAGTCGT TTTAGGATCCTGTGATT TGCTTCCT GCCATGAAAAATCAAGC TTGATCTCT GCAACTTCTGT ACCTCTGGGTTGCTTGGCAACGATTTGTGTTTGTGTTATTAGACTTGAAGCATCCTGGATTGTACCTGAATCTTTGCATCGTCCGTTATTTCATATGGCTTTGGACATAATGTCTGAAGTCTGAACAAATAATACTTATATGTAATGGAATGGAAATGAGAATAAAACTATGGCAATGTGAG ]
[+] EMBL CB624357 [ CCGCAAGATCACCTTCCTCATCGGCCCCGAGGTGTCGGCGCACTTCTTCAAGGGGAACGAGGCCGAGATGAGCCAGCAGGAGGTCTACAAGTTCAACGTGCCCACCTTCGGCCCCGGCGTCGTCTTCGACGTCGACTACTCCGTCAGGCAGGAGCAGTTCAGGTTCTTCACCGAGGCGCTCCGCGCCAACAAGCTCCGCAGCTATGTCGACCAGATGGTTGTCGAGGCTGAGGAGTACTTCTCTAAGTGGGGAGAAAGTGGAACGGTGGATCTGAAGTATGAGCTGGAGCATCTCATCATTCTGACTGCTAGTCGGTGCTTGCTCGGGA GGGAGGTGCGAGAAAAGCTCTTTGATGATGTTTCTTCTCTCTTCCATGATCTGGACAATGGGATGCAGCCAGTCAGTGTCATCTTCCCCTACCTCCCAATTCCTGCACACCG CCGCCGTGACCGGGCACGGCAACGGTTGAAGGAAATCTTCGCCACCATCATCAAGTCCCGCAAGGCCTCTGGACGGGCTGAGGAAGACATGCTGCAGTGCTTCATTGATTCGAAGTACAAGAGTGGACGCTCAACCACAGAAGGTGAAATAACCGGCCTACTTATTGCAGCACTATTTGCTGGACAGCACACTAGCTCTATCACCTCAACCTGGACTGGGGCCTACATGCTTCGCTTCAAGCAGTACTTCGCAGCAGCCGAAGAGGAGCAGAAGGAGGTCATGAAGCGGCACGGGGACAAGATCGATCATGACATCTTGGCAGAGATGGATGTCCTCTACAGGTGCATCAAGGAGGCGCTCCGTCTTCACCCACCGCTAATCATGCTGCTCCGCCAGTC ]
[+] EMBL CB623104 [ CCGCAAGATCTCCTTCCTCATCGGCCCCGAGGTGTCGGCGCACTTCTTCAAGGGGAACGAGGCCGAGATGAGCCAGCAGGAGGTCTACAAGTTCAACGTGCCCACCTTCGGCCCCGGCGTCGTCTTCGACGTCGACTACTCCGTCAGGCAGGAGCAGTTCAGGTTCTTCACCGAGGCGCTCCGCGCCAACAAGCTCCGCAGCTATGTCGACCAGATGGTTGTCGAGGCTGAGGAGTACTTCTCTAAGTGGGGAGAAAGTGGAACGGTGGATCTGAAGTATGAGCTGGAGCATCTCATCATTCTGACTGCTAGTCGGTGCTTGCTCGGGA GGGAGGTGCGAGAAAAGCTCTTTGATGATGTTTCTTCTCTCTTCCATGATCTGGACAATGGGATGCAGCCAGTCAGTGTCATCTTCCCCTACCTCCCAATTCCTGCACACCG CCGCCGTGACCGGGCACGGCAACGGTTGAAGGAAATCTTCGCCACCATCATCAAGTCCCGCAAGGCCTCTGGACGGGCTGAGGAAGACATGCTGCAGTGCTTCATTGATTCGAAGTACAAGAGTGGACGCTCAACCACAGAAGGTGAAATAACCGGCCTACTTATTGCAGCACTATTTGCTGGACAGCACACTAGCTCTATCACCTCAACCTGGACTGGGGCCTACATGCTTCGCTTCAAGCAGTACTTCGCAGCAGCCGAAGAGGAGCAGAAGGAGGTCATGAAGCGGCACGGGGACAAGATCGATCATGACATCTTGGCAGAGATGGATGTCCTCTACANGTGCATCAGGGAGGC ]
[+] EMBL CA757497 [ CGCCGTGACCGGGCACGGCAACGGTTGAAGGAAATCTTCGCCACCATCATCAAGTCCCGCAAGGCCTCTGGACAGGCTGAGGAAGACATGCTACAGTGCTTCATTGATTCGAAGTACAAGAGTGGACGCTCAACCACAGAAGGTGAAATAACCGGCCTACTTATTGCAGCACTATTTGCTGGACAGCACACTAGCTCTATCACCTCAACCTGGACTGGGGCCTACATGCTTCGCTT ]
[+] EMBL BE040549 [ CGCCGTGACCGGGCACGGCAACGGTTGAAGGAAATCTTCGCCACCATCATCAAGTCCCGCAAGGCCTCTGGACAGGCTGAGGAAGACATGCTACAGTGCTTCATTGATTCGAAGTACAAGAGTGGACGCTCAACCACAGAAGGTGAAATAACCGGCCTACTTATTGCAGCACTATTTGCTGGACAGCACACTAGCTCTATCACCTCAACCTGGACTGGGGCCTACATGCTTCGCTT ]
[+] EMBL AU173311 [ GCTGCAGTGCTTCATTGATTCGAAGTACAAGAGTGGACGCTCAACCACAGAAGGTGAAATAACCGGCCTACTTATTGCAGCACTATTTGCTGGACAGCACACTAGCTCTATCACCTCAACCTGGACTGGGGCCTACATGCTTCGCTTCAAGCAGTACTTCGCAGCAGCCGAAGAGGAGCAGAAGGAGGTCATGAAGCGGCACGGGGACAAGATCGATCATGACATCTTGGCAGAGATGGATGTCCTCTACAGGTGCATCAAGGAGGCGCTCCGTCTTCACCCACCGCTAATCATGCTGCTCCGCCAGTCACACAACGACTTCTCAGTGACAACGAAGGATGGCAAAGAGTTCGACATCCCGAAGGGCCACATCGTCGCGACATCTCCAGCCTTCGC ]
[+] EMBL BE230302 [ ACTTATTGCAGCACTATTTGCTGGACAGCACACTAGCTCTATCACCTCAACCTGGACTGGGGCCTACATGCTTCGCTTCAAGCAGTACTTCGCAGCAGCCGAAGAGGAGCAGAAGGAGGTCATGAAGCGGCACGGGGACAAGATCGATCATGACATCTTGGCAGAGATGGATGTCCTCTACAGGTGCATCAAGGAGGCGCTCCGTCTTCACCCGCCGCTAATCATGCTGCTCCGCCAGTCACACAACGACTTCTCAGTGACAACGAAGGATGGCAAAGAGTTCGACATCCCGAAGGGCCACATCGTCGCGACATCTCCAGCCTTCGCCAACAGGCTCCCTCACATCTTCAAGAACCCCGACTCATACGACCCCGACCGCTACGCACCATGCAGGGAGGAGGACAAGGCAGCGGGCGCCTTCTCGTACATCTCCTTTGGTGGCGGCAGGCA CGGTTGCCTCGGTGAGCCCTTCGCCTACCTACAAGATCAAGGGCATATGGACTCACCTGCTGAGGAACTTTGAGTTCGAGCTGGTCT CCCCTT CCGGATA C AACTGGAAAAGC ATGGGCG CGGCATCAAGGACN AGGGGATGGGCAACTTCAAGCGGg ]
[+] EMBL BE230288 [ ACTTATTGCAGCACTATTTGCTGGACAGCACACTAGCTCTATCACCTCAACCTGGACTGGGGCCTACATGCTTCGCTTCAAGCAGTACTTCGCAGCAGCCGAAGAGGAGCAGAAGGAGGTCATGAAGCGGCACGGGGACAAGATCGATCATGACATCTTGGCAGAGATGGATGTCCTCTACAGGTGCATCAAGGAGGCGCTCCGTCTTCACCCGCCGCTAATCATGCTGCTCCGCCAGTCACACAACGACTTCTCAGTGACAACGAAGGATGGCAAAGAGTTCGACATCCCGAAGGGCCACATCGTCGCGACATCTCCAGCCTTCGCCAACAGGCTCCCTCACATCTTCAAGAACCCCGACTCATACGACCCCGACCG TTCGCACCATGCAGGGAGGAGGACAAGGCAGCGGGCGCCTTCTCGTACATCTCCTTTGGTGGCGGCAGGCACCGGTTG CTCGGTGAGCCCTTCG CTACCTACAAGATCAAGGGCATATGGACTCACCTGCTGAGG ACTTTGAGTTCAAACTGGCCT CCCCTTCCCGGAAACC AACTGGAAAG C ATGGcc ]
[+] EMBL CF323845 [ CACGGGGACAAGATCGATCATGACATCTTGGCAGAGATGGATGTCCTCTACAGGTGCATCAAGGAGGCGCTCCGTCTTCACCCGCCGCTAATCATGCTGCTCCGCCAGTCACACAACGACTTCTCAGTGACAACGAAGGATGGCAAAGAGTTCG ]
[+] EMBL CF324233 [ AGAGATGGATGTCCTCTACAGGTGCATCAAGGAGGCGCTCCGTCTTCACCCGCCGCTAATCATGCTGCTCCGCCAGTCACACAACGACTTCTCAGTGACAACGAAGGATGGCAAAGAGTTCGACATCCCGAAGGGCCACATCGTCGCGACATCTCCAGCCTTCGCCAACAGGCTCCCTCACATCTTCAAGAACCCCGACTCATACGACCCCGACCGCTACGCACCAGGCAGGGAGGAGGACAAGGCAGCGGGCGCCTTCTCGTACATCTCCTTTGGTGGCGGCAGGCA CGGTTGCCTCGGTGAGCCCTTCGCCTACCTAC AGATCAAGGCCATATGGACTCACCTGCTGAGGAACTTTGAGTTCGAGCTGGTCTCCCCCTTCCCGGAGACC AACTGGAAAGCCNATGGTCGTCGGCATCAAGGACGAAGGTGATGGTCAACTTCAAGCGGCGGAACCTC GTCGTC GACAACTAGGATGCCACCTTC ACCTTAGGAGTCGATG CTTGTCGCGCTTTTCGCC TT TTTTCTCTTCTTTTCCCTTTCTGT ]
[-] EMBL CB624358 [ GTCCTCTACAGGTGCATCAAGGAGGCGCTCCGTCTTCACCCACCGCTAATCATGCTGCTCCGCCAGTCACACAACGACTTCTCAGTGACAACGAAGGATGGCAAAGAGTTCGACATCCCGAAGGGCCACATCGTCGCGACATCTCCAGCCTTCGCCAACAGGCTCCCTCACATCTTCAAGAACCCCGACTCATACGACCCCGACCGCTACGCACCAGGCAGGGAGGAGGACAAGGCAGCGGGCGCCTTCTCGTACATCTCCTTTGGTGGCGGCAGGCA CGGTTGCCTCGGTGAGCCCTTCGCCTACCTAC AGATCAAGGCCATATGGACTCACCTGCTGAGGAACTTTGAGTTCGAGCTGGTCTCCCCCTTCCCGGAGACC AACTGGAAAGCC ATGGTCGTCGGCATCAAGGACG AGGTGATGGTCAACTTCAAGCGGCGGAAGCTC GTCGTC GACAACTAGGATGCCACCTTCAACCTTAGGAGTCGATG CTTGTCGCGCTTTTCGCC TT TTTTCTCTTCTTTTCCCTTTCTGTCAGTAT TTGATCCGT GT AAG TTTCT GCCAGCTTTGT ATT AGGGTGT TTCAGTCGT TTTAGGATCCTGTGATT TGCTTCCT GCCATGAAAAATCAAGC TTGATCTCT GCAACTTCTGT ACCTCTGGGTTGCTTGGCAACGATTTGTGTTTGTGTTATTAGACTTGAAGCATCCTGGATTGTACCTGAATCTTTGCATCGTCCGTTATTTCATATGGCTTTGGACATAATGTCTGAAGTCTGAACAAATAATACTTATATGTAATGGAATGGAAATGAGAATAAAACTATGGCAATGTGAGT ]
[-] EMBL CB623105 [ AATCATGCTGCTCCGCCAGTCACACAACGACTTCTCAGTGACAACGAAGGATGGCAAAGAGTTCGACATCCCGAAGGGCCACATCGTCGCGACATCTCCAGCCTTCGCCAACAGGCTCCCTCACATCTTCAAGAACCCCGACTCATACGACCCCGACCGCTACGCACCAGGCAGGGAGGAGGACAAGGCAGCGGGCGCCTTCTCGTACATCTCCTTTGGTGGCGGCAGGCA CGGTTGCCTCGGTGAGCCCTTCGCCTACTTAC AGATCAAGGCCATATGGACTCACCTGCTGAGGAACTTTGAGTTCGAGCTGGTCTCCCCCTTCCCGGAGACC AACTGGAAAGCC ATGGTCGTCGGCATCAAGGACG AGGTGATGGTCAACTTCAAGCGGCGGAAGCTC GTCGTC GACAACTAGGATGCCACCTTCAACCTTAGGAGTCGATG CTTGTCGCGCTTTTCGCC TT TTTTCTCTTCTTTTCCCTTTCTGTCAGTAT TTGATCCGT GT AAG TTTCT GCCAGCTTTGT ATT AGGGTGT TTCAGTCGT TTTAGGATCCTGTGATT TGCTTCCT GCCATGAAAAATCAAGC TTGATCTCT GCAACTTCTGT ACCTCTGGGTTGCTTGGCAACGATTTGTGTTTGTGTTATTAGACTTGAAGCATCCTGGATTGTACCTGAATCTTTGCATCGTCCGTTATTTCATACGGCTTTGGACATAATGTCTGAAGTCTGAACAAATAATACTTATAT AAGTGGAATGGAAATGAGAATAA ]
[+] EMBL BI805891 [ CCCTTCCCGGAGACCAAACTGGAAAGCC ATGGTCGTCGGCATCAAGGACG AGGTGATGGTCAACTTCAAGCGGCGGAAGCTCTGTCGTCTGACAACTAGGATGCCACCTTCAACCTTAGGAGTCGATGTCTTGTCGCGCTTTTCGCC TTNGTTTCTCTTCTTTTCCCTTTCTGTCAGTATGTTGAGCCGTGGTGAAGNTTGCTGGCCAGCTTTGTGATTGAGGGTGTGTTCAGTCGTGTTTAGGATCCTGTGATTGNGGCTTCCTGGCCATGAAAAATCAAGCGTTGATCTCTGGCAACTTCTGTGACCTCTGGGTTGCTTGGC ACGATTTGTGTTTGTGTTATTAGACTTGAAGCATCCTGGATTGTACCTGAATCTTTGCATCGTCCGTTATTTCATATGGCTTTGGACATAATGTCTGAAGTCTGAACAAATAATACTTATATGTAATGGAATGGAAATGAGAATNAAACTAaaaaaaaaa ]
[+] EMBL BE607441 [ AACTGGAAAGCC ATGGTCGTCGGCATCAAGGACG AGGTGATGGTCAACTTCAAGCGGCGGAAGCTC GTCGTC GACAACTAGGATGCCACCTTCAACCTTAGGAGTCGATG CTTGTCGCGCTTTTCGCC TT TTTTCTCTTCTTTTCCCTTTCTGTCAGTAT TTGATCCGT GT AAG TTTCT GCCAGCTTTGT ATT AGGGTGT TTCAGTCGT TTTAGGATCCTGTGATT TGCTTCCT GCCATGAAAAATCAAGC TTGATCTCT GCAGCTTCTGT ACCTCTGGGTTGCTTGGCAACGATTTGTGTTTGTGTTATTAGACTTGAAGCATCCTGGATTGTACCTGAATCTTTGCATCGTCCGTTATTTCATATGGCTTTGGACATAATGTCTGAAGTCTGAACTAATAATACTTA ]
[+] EMBL AU173312 [ TAGGATGCCACCTTCAACCTTAGGAGTCGATG CTTGTCGCGCTTTTCGCC TT TTTTCTCTTCTTTTCCCNTTCTGTCAGTAT TTGATCCGT GT AAG TTTNT GCCAGCTTTGT ATT AGGGTGT TTCAGTCGT TTTAGGATCCTGTGATT TGCTTCCT GCCATGAAAAATCAAGC TTGATCTNT GCAACTTNTGT ACCTNTGGGTTGCTTGGCAACGATTTGTGTTTGTGTTATTAGACTTGAAGCATCCTGGATTGTACCTGAATCTTTGCATCGTCCGTTATTTCATATGGCTTTGGACATAATGTNTGAAGTNTGAACAAATAATACTTATATGTAATGGAATGGAAATGAGAATAAAACTATGGCAATGTGAGTTGTNTCAAAAAAAAAAAAAAAAAAAAAA]
consensusID : consensus_15169#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 470 fasta sequence
[CTCACTGCTGAGACTTGAGTCAGCTGCTCCCCTCCCGAGCAACTGAAGCATGTCGCGCTCAAGGCGAGTGTGGTCAACTCAAGCGCGAAGCCGCGCGCAACTAGATGCACCTCAACCTAGAGCGATCTTGTCGGCTTTCGCCTTTTTCTCTTCTTTTCCCTTTCTGTCAGTATTTGATCCGTGTAAGTTTCTGCCAGCTTTGTATTAGGGTGTTTCAGTCGTTTTAGGATCCTGTGATTTCTTCCTGCCATGAAAAATCAAGCTTGATCTCTGCAACTTCTGTACCTCTGGGTGCTTGGCAACGATTTGTGTTTGTGTTATTAGACTTGAAGCATCCTGGATTGTACCTGAATCTTTGCATCGTCCGTTATTTCATATGGCTTTGGACATAATGTCTGAAGTCTGAACAAATAATACTTATATGTAATGGAATGGAAATGAGAATAAAACTATGGCAATGTGAGTTGTCT]
[-] EMBL D42476 [CTCACTGCTGAGACTTGAGTCAGCTGCTCCCCTCCCGAGCAACTGAAGCATGTCGCGCTCAAGGCGAGTGTGGTCAACTCAAGCGCGAAGCCGCGCGCAACTAGATGCACCTCAACCTAGAGCGATCTTGTCGGCTTTCGCCTTTTTCTCTTCTTTTCCCTTTCTGTCAGTATTTGATCCGTGTAAGTTTCTGCCAGCTTTGTATTAGGGTGTTTCAGTCGTTTTAGGATCCTGTGATTTCTTCCTGCCATGAAAAATCAAGCTTGATCTCTGCAACTTCTGTACCTCTGGGTGCTTGGCAACGATTTGTGTTTGTGTTATTAGACTTGAAGCATCCTGGATTGTACCTGAATCTTTGCATCGTCCGTTATTTCATATGGCTTTGGACATAATGTCTGAAGTCTGAACAAATAATACTTATATGTAATGGAATGGAAATGAGAATAAAACTATGGCAATGTGAGTTGTCT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_15169#0 ATCTCTGCCGCCCCGGTTTCCCATCTCCGCCCGCAGTAAACCCCTCCTCATTCCCACCAC 60
consensus_15169#1 ------------------------------------------------------------
consensus_15169#0 CACCTCTCCTCGGAGGAATCTTTGCTGCTTTCCTTTATATAAACCCCTCTCCAGTCTATA 120
consensus_15169#1 ------------------------------------------------------------
consensus_15169#0 CTTCCACTCCACACTCCCCTCCACCCCCCCCCCCACACCCGCAGCAGCAGGGAGAAGACG 180
consensus_15169#1 ------------------------------------------------------------
consensus_15169#0 ACGACGAAGATGATGGATCTCGCCGACCCAAACCACCGGCTCATCGCCGGCGCGGCGCTG 240
consensus_15169#1 ------------------------------------------------------------
consensus_15169#0 CTGGTGGCCACCCTCGCCTTCATCAAGCTGCTGCTGAGCTCCGCCGGCGGCGGCAAGAAG 300
consensus_15169#1 ------------------------------------------------------------
consensus_15169#0 CGCCTCCCGCCGACCATCCCGGCGGCGCCGCTGGTGGGCGGGCTGCTCCGCTTCATGCGG 360
consensus_15169#1 ------------------------------------------------------------
consensus_15169#0 GGGCCGATCCCGATGATCCGGGAGGAGTACGCCCGCCTCGGCAGCGTCTTCACCGTCCCC 420
consensus_15169#1 ------------------------------------------------------------
consensus_15169#0 ATCCTCAGCCGCAAGATCACCTTCCTCATCGGCCCCGAGGTGTCGGCGCACTTCTTCAAG 480
consensus_15169#1 ------------------------------------------------------------
consensus_15169#0 GGGAACGAGGCCGAGATGAGCCAGCAGGAGGTCTACAAGTTCAACGTGCCCACCTTCGGC 540
consensus_15169#1 ------------------------------------------------------------
consensus_15169#0 CCCGGCGTCGTCTTCGACGTCGACTACTCCGTCAGGCAGGAGCAGTTCAGGTTCTTCACC 600
consensus_15169#1 ------------------------------------------------------------
consensus_15169#0 GAGGCGCTCCGCGCCAACAAGCTCCGCAGCTATGTCGACCAGATGGTTGTCGAGGCTGAG 660
consensus_15169#1 ------------------------------------------------------------
consensus_15169#0 GAGTACTTCTCTAAGTGGGGAGAAAGTGGAACGGTGGATCTGAAGTATGAGCTGGAGCAT 720
consensus_15169#1 ------------------------------------------------------------
consensus_15169#0 CTCATCATTCTGACTGCTAGTCGGTGCTTGCTCGGGAGGGAGGTGCGAGAAAAGCTCTTT 780
consensus_15169#1 ------------------------------------------------------------
consensus_15169#0 GATGATGTTTCTTCTCTCTTCCATGATCTGGACAATGGGATGCAGCCAGTCAGTGTCATC 840
consensus_15169#1 ------------------------------------------------------------
consensus_15169#0 TTCCCCTACCTCCCAATTCCTGCACACCGCCGCCGTGACCGGGCACGGCAACGGTTGAAG 900
consensus_15169#1 ------------------------------------------------------------
consensus_15169#0 GAAATCTTCGCCACCATCATCAAGTCCCGCAAGGCCTCTGGACGGGCTGAGGAAGACATG 960
consensus_15169#1 ------------------------------------------------------------
consensus_15169#0 CTGCAGTGCTTCATTGATTCGAAGTACAAGAGTGGACGCTCAACCACAGAAGGTGAAATA 1020
consensus_15169#1 ------------------------------------------------------------
consensus_15169#0 ACCGGCCTACTTATTGCAGCACTATTTGCTGGACAGCACACTAGCTCTATCACCTCAACC 1080
consensus_15169#1 ------------------------------------------------------------
consensus_15169#0 TGGACTGGGGCCTACATGCTTCGCTTCAAGCAGTACTTCGCAGCAGCCGAAGAGGAGCAG 1140
consensus_15169#1 ------------------------------------------------------------
consensus_15169#0 AAGGAGGTCATGAAGCGGCACGGGGACAAGATCGATCATGACATCTTGGCAGAGATGGAT 1200
consensus_15169#1 ------------------------------------------------------------
consensus_15169#0 GTCCTCTACAGGTGCATCAAGGAGGCGCTCCGTCTTCACCCACCGCTAATCATGCTGCTC 1260
consensus_15169#1 ------------------------------------------------------------
consensus_15169#0 CGCCAGTCACACAACGACTTCTCAGTGACAACGAAGGATGGCAAAGAGTTCGACATCCCG 1320
consensus_15169#1 ------------------------------------------------------------
consensus_15169#0 AAGGGCCACATCGTCGCGACATCTCCAGCCTTCGCCAACAGGCTCCCTCACATCTTCAAG 1380
consensus_15169#1 ------------------------------------------------------------
consensus_15169#0 AACCCCGACTCATACGACCCCGACCGCTACGCACCAGGCAGGGAGGAGGACAAGGCAGCG 1440
consensus_15169#1 ------------------------------------------------------------
consensus_15169#0 GGCGCCTTCTCGTACATCTCCTTTGGTGGCGGCAGGCACGGTTGCCTCGGTGAGCCCTTC 1500
consensus_15169#1 ------------------------------------------------------------
consensus_15169#0 GCCTACCTACAGATCAAGGCCATATGGACTCACCTGCTGAGGAACTTTGAGTTCGAGCTG 1560
consensus_15169#1 --------------------------------CTCACTGCTGAGACTTGAGTC--AGCTG 26
* *** ** ****** *****
consensus_15169#0 GTCTCCCCCTTCCCGGAGACCAACTGGAAAGCCATGGTCGTCGGCATCAAGGACGAGGTG 1620
consensus_15169#1 CTCCCCTCCC-------GAGCAACTGAAG---CAT----GTCGCGCTCAAGG-CGAG--T 69
** ** ** ** ****** * *** **** ****** ****
consensus_15169#0 ATGGTCAACTTCAAGCGGCGGAAGCTCGTCGTCGACAACTAGGATGCCACCTTCAACCTT 1680
consensus_15169#1 GTGGTCAACT-CAAGCG--CGAAGC----CGCGCGCAACTAG-ATGC--ACCTCAACCTA 119
********* ****** ***** ** ******* **** * *******
consensus_15169#0 AGGAGTCGATGCTTGTCGCGCTTTTCGCCTTTTTTCTCTTCTTTTCCCTTTCTGTCAGTA 1740
consensus_15169#1 GAG---CGAT-CTTGTCG--GCTTTCGCCTTTTT-CTCTTCTTTTCCCTTTCTGTCAGTA 172
* **** ******* ************ *************************
consensus_15169#0 TTTGATCCGTGTAAGTTTCTGCCAGCTTTGTATTAGGGTGTTTCAGTCGTTTTAGGATCC 1800
consensus_15169#1 TTTGATCCGTGTAAGTTTCTGCCAGCTTTGTATTAGGGTGTTTCAGTCGTTTTAGGATCC 232
************************************************************
consensus_15169#0 TGTGATTTGCTTCCTGCCATGAAAAATCAAGCTTGATCTCTGCAACTTCTGTACCTCTGG 1860
consensus_15169#1 TGTGATTT-CTTCCTGCCATGAAAAATCAAGCTTGATCTCTGCAACTTCTGTACCTCTGG 291
******** ***************************************************
consensus_15169#0 GTTGCTTGGCAACGATTTGTGTTTGTGTTATTAGACTTGAAGCATCCTGGATTGTACCTG 1920
consensus_15169#1 GT-GCTTGGCAACGATTTGTGTTTGTGTTATTAGACTTGAAGCATCCTGGATTGTACCTG 350
** *********************************************************
consensus_15169#0 AATCTTTGCATCGTCCGTTATTTCATATGGCTTTGGACATAATGTCTGAAGTCTGAACAA 1980
consensus_15169#1 AATCTTTGCATCGTCCGTTATTTCATATGGCTTTGGACATAATGTCTGAAGTCTGAACAA 410
************************************************************
consensus_15169#0 ATAATACTTATATGTAATGGAATGGAAATGAGAATAAAACTATGGCAATGTGAGTTGTNT 2040
consensus_15169#1 ATAATACTTATATGTAATGGAATGGAAATGAGAATAAAACTATGGCAATGTGAGTTGTCT 470
********************************************************** *
consensus_15169#0 CAAAAAAAAAAAAAAAAAAAAAA 2063
consensus_15169#1 -----------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||