These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15219#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 19 consensus length = 2159 fasta sequence [CGCCGTCGCCATCGCGGTCGTGGTTGTGTTCGTCTGTTCGTGTACTCTGGATCGATCGATTGATCGGGCGCGGGTGGAGGAGGAGGAGGAGGAGGGTTTCGAGGGGGTGTGCTAGGGTTTCGAGTGGAGGTGGGGGGAGGTTGAGCTCAGTTCATTCTTCTGTCGCCGTGGTGGGGGCGGGGGAGGCGGAGCCGGATGCTATGCTGCTAGGCTGCTCGTCCCTGACGTCGTGGGTGCGTCGCCTCGTCGCCTGCGTTG-----GAAATTGTTTTGGATGTGCGAAACCTACT-CCAATAA-TAGCCGTTGATGAGCCTTCAAAAGGTTTAAGAATTCAAGGGCGCTCAATAAAG-CAGCGGAGTTTGTCGGAGGACTTTTGGAGTTCAAG-CCCGCCGGGAATGGAGAATAGTGCCATGCAATCTCAGCGTAGCATGTCTTCAATCAGTACGGCAGCACAATCGAGCGATCAGCATGGAGCTGGAAGTAGCACCAACCCAAATGAGTTTGTAAATCAAGGACTTCTCCTGTGGAACCAGACTAGGCAACAGTGGGTTGGAAACAGAAGGCACAATTCTCAGCGTCAACAACCTCGAGAGCCAAAAATAAGTTGGAATGCTACATATGAGAGCCTTCTAGGAAGCACAAAACCATTTCCACAAGCGATCCCTCTTGGTGAAATGGTAGATTTCCTCGTGGACGGCTGGGAGCAGGAAGGCCTATATGATTAGTGGGTTAAATGAGTGATGAAGGGTGTTGTTTGTGGGGTCAAATTATGAATCACCGAGAATGTACTCAGAAAAACTTCAGCCTTTCAAA-GCTTGTGGGTGATAACTGCGGTATTCCTGGAGACAGGATGGCATCCCTATCTTAAGTAAA-CGTAACATATTCTTTACTGCTAATTGTGTTAACATAAGTTTCATATTGTGATATCTTCTCGCTGTGCATAATTGGACATTGTTATTACTAATCAATGTGCAGGCTCTGTTTAGTTTTTTTTTCTTTTTTTCCGCGAGGTGGATATGTGTCGCATCTGACGTCCTCTTGGCAATGCCTTTAGCTGATTGCCCCTTGTCCATTAGGCCATTACCGTGTTTATGCAGGCTCTACCAGAGGGTTTTGGATGTCTTCGCCTCCTTTCCAGATGCCTCTCTCCGGACTCCTGTCCTCGTGTTCTTTCTCGCTTTATATGCGAAACCCTTCACAGCAATACGATCGCATCGCCATCTTCAAGCAGAGTAACTAACTGACAAATTCACTTCACTGCGGTTTAGTGGTGCATTAGCATTTTAT--ACACACTTTGCTGGCCATGGCTTTAGCTCGCCAATGCCTCAGCAAACGCCTCGCCGCCGGCTGCGCTCTGGCGAGGCCACTGCACGCGGCGTCGCCGGTGGCGGCGGCGGCTGCCAATTCTCATGGGCCGCTCAACTTTCGTGCCCTCTTCTCGTCGGCGGGAGCCGACGCCGCCGCCACCACCGGCGGCTGCGCTCCTGCGAAAGGCGACGGTCACAGCCGTGAGGTCGCCGTCGTGGACCGCTCGCGCCGCCGCTGGCCGTGGCGAGACCTCCGCGACTTCGTCCCGCTCCGCCTCGTCGACGGCATCGGGAGCGCGCTGTCGCAGGTGGCGGAGACGCTGACCCGGCCGCTGACGGGGAAGGTGCGGGAGGACGAGGAGCGGTACAGGCTGCGGTTCGAGGTGCCGGGCCTCGGGAAGGACGACGTCCGCGTCTACGTGGACGACGGCGTGCTCGCCATCCACGGCGAGAAGCGCGACGTGGTGGAGGAGGACCGCGGCCGCGACGGCGACGGCGAGTGCTGGGCGGCGGCGACGTACCACGCCGGCCTGCTCCTCCCGGAGGACGCGGTGGCGGAGGGGATCACGGCGGAGGTGAGGGACGGCGTGCTGCACGTCACCGTGCCCCGCTCGCCGGAGAGGAAGAGGAGCGTCACCGAGGTCAAGGTGCGGTAGTAGCAGCGTGGACTGAGCCTGGCTGCTTGGGCCTCGTTTGTATGGGCCTTTATCCCGGCCCATCTTGTGTATGGGCCTGGATTCTGTAATTAAGTACTGTATGGGCCTACTACCATAATGTGGCATTCTGGAGTTCTTTATTAATGCCACATTACCCTTTATGAATGGCCTCGTTCATAGTCTTGATGAATTTTGAGTG] [+] EMBL AK106682 [CGCCGTCGCCATCGCGGTCGTGGTTGTGTTCGTCTGTTCGTGTACTCTGGATCGATCGATTGATCGGGCGCGGGTGGAGGAGGAGGAGGAGGAGGGTTTCGAGGGGGAGTGCTAGGGTTTCGAGTGGAGGTGGGGGGAGGTTGAGCTCAGTTCATTCTTCTGTCGCCGTGGTGGGGGCGGGGGAGGCGGAGCCGGATGCTATGCTGCTAGGCTGCTCGTCCCTGACGTCGTGGGTGCGTCGCCTCGTCGCCTACGTTGGAGCAGAAATTGTTTTGGATGTGCGAAACCTACT CCAATAA TAGCCGTTGATGAGCCTTCAAAAGGTTTAAGAATTCAAGGGCGCTCAATAAAG CAGCGGAGTTTGTCGGAGGACTTTTGGAGTTCAAG CCCGCCGGGAATGGAGAATAGTGCCATGCAATCTCAGCGTAGCATGTCTTCAATCAGTACGGCAGCACAATCGAGCGATCAGCATGGAGCTGGAAGTAGCACCAACCCAAATGAGTTTGTAAATCAAGGACTTCTCCTGTGGAACCAGACTAGGCAACAGTGGGTTGGAAACAGAAGGCACAATTCTCAGCGTCAGCAACCTCGAGAGCCAAAAATAAGTTGGAATGCTACATATGAGAGCCTTCTAGGAAGCACAAAACCATTTCCACAAGCGATCCCTCTTGGTGAAATGGTAGATTTCCTCGTGGACGGCTGGGAGCAGGAAGGCCTATATGATTAGTGGGTTAAATGAGTGATGAAGGGTGTTGTTTGTGGGGTCAAATTATGAATCACCGAGAATGTACTCAGAAAAACTTCAGCCTTTCAAA GCTTGTGGGTGATAACTGCGGTATTCCTGGAGACAGGATGGCATCCCTATCTTAAGTAAA CGTAACATATTCTTTACTGCTAATTGTGTTAACATAAGTTTCATATTGTGATATCTTCTCGCTGTGCATAATTGGACATTGTTATTACTAATCAATGTGCAGGCTCTGTTTAGTTTTTTTTTCTTTTTTTCCGCGAGGTGGATATGTGTCGCATCTGACGTCCTCTTGGCAATGCCTTTAGCTGATTGCCCCTTGTCCATTAGGCCATTACCGTGTTTATGCAGGCTCTACCAGAGGGTTTTGGATGTCTTCGCCTCCTTTCCAGATGCCTCTCTCCGGACTCCTGTCCTCGTGTTCTTTCTCGCTTTATATGCGAAACCCTTCACAGCAATACGATCGCATCGCCATCTTCAAGCAGAGTAACTAACTGACAAATTCACTTCACTGCGGTTTAGTGGTGCATTAGCATTTTAT ACACACTTTGCTGGCCATGGCTTTAGCTCGCCAATGCCTCAGCAAACGCCTCGCCGCCGGCTGCGCTCTGGCGAGGCCACTGCACGCGGCGTCGCCGGTGGCGGCGGCGGCTGCCAATTCTCATGGGCCGCTCAACTTTCGTGCCCTCTTCTCGTCGGCGGGAGCCGACGCCGCCGCCACCACCGGCGGCTGCGCTCCTGCGAAAGGCGACGGTCACAGCCGTGAGGTCGCCGTCGTGGACCGCTCGCGCCGCCGCTGGCCGTGGCGAGACCTCCGCGACTTCGTCCCGCTCCGCCTCGTCGACGGCATCGGGAGCGCGCTGTCGCAGGTGGCGGAGACGCTGACCCGGCCGCTGACGGGGAAGGTGCGGGAGGACGAGGAGCGGTACAGGCTGCGGTTCGAGGTGCCGGGCCTCGGGAAGGACGACGTCCGCGTCTACGTGGACGACGGCGTGCTCGCCATCCACGGCGAGAAGCGCGACGTGGTGGAGGAGGACCGCGGCCGCGACGGCGACGGCGAGTGCTGGGCGGCGGCGACGTACCACGCCGGCCTGCTCCTCCCGGAGGACGCGGTGGCGGAGGGGATCACGGCGGAGGTGAGGGACGGCGTGCTGCACGTCACCGTGCCCCGCTCGCCGGAGAGGAAGAGGAGCGTCACCGAGGTCAAGGTGCGGTAGTAGCAGCGTGGACTGAGCCTGGCTGCTTGGGCCTCGTTTGTATGGGCCTTTATCCCGGCCCATCTTGTGTATGGGCCTGGATTCTGTAATTAAGTACTGTATGGGCCTACTACCATAATGTGGCATTCTGGAGTTCTTTATTAATGCCACATTACCCTTTATGAATGGCCTCGTTCATAGTCTTGATGAATTTTGAGTG] [+] EMBL AK064792 [CGCCGTCGCCATCGCGGTCGTGGTTGTGTTCGTCTGTTCGTGTACTCTGGATCGATCGATTGATCGGGCGCGGGTGGAGGAGGAGGAGGAGGAGGGTTTCGAGGGGGTGTGCTAGGGTTTCGAGTGGAGGTGGGGGGAGGTTGAGCTCAGTTCATTCTTCTGTCGCCGTGGTGGGGGCGGGGGAGGCGGAGCCGGATGCTATGCTGCTAGGCTGCTCGTCCCTGACGTCGTGGGTGCGTCGCCTCGTCGCCTGCGTTGGAGCAGAAATTGTTTTGGATGTGCGAAACCTACT CCAATAA TAGCCGTTGATGAGCCTTCAAAAGGTTTAAGAATTCAAGGGCGCTCAATAAAG CAGCGGAGTTTGTCGGAGGACTTTTGGAGTTCAAG CCCGCCGGGAATGGAGAATAGTGCCATGCAATCTCAGCGTAGCATGTCTTCAATCAGTACGGCAGCACAATCGAGCGATCAGCATGGAGCTGGAAGTAGCACCAACCCAAATGAGTTTGTAAATCAAGGACTTCTCCTGTGGAACCAGACTAGGCAACAGTGGGTTGGAAACAGAAGGCACAATTCTCAGCGTCAACAACCTCGAGAGCCAAAAATAAGTTGGAATGCTACATATGAGAGCCTTCTAGGAAGCACAAAACCATTTCCACAAGCGATCCCTCTTGGTGAAATGGTAGATTTCCTCGTGGACGGCTGGGAGCAGGAAGGCCTATATGATTAGTGGGTTAAATGAGTGATGAAGGGTGTTGTTTGTGGGGTCAAATTATGAATCACCGAGAATGTACTCAGAAAAACTTCAGCCTTTCAAA GCTTGTGGGTGATAACTGCGGTATTCCTGGAGACAGGATGGCATCCCTATCTTAAGTAAA CGTAACATATTCTTTACTGCTAATTGTGTTAACATAAGTTTCATATTGTGATATCTTCTCGCTGTGCATAATTGGACAT ] [+] EMBL OSS1390A [CGCCGTCGCCATCGCGGTCGTGGTTGTGTTCGTCTGTTCGTGTACTCTGGATCGATCGATTGATCGGGCGCGGGTGGAGGAGGAGGAGGAGGAGGGTTTCGAGGGGGTGTGCTAGGGTTTCGAGTGGAGGTGGGGGGAGGTTGAGCTCAGTTCATTCTT ] [+] EMBL OSR20861A [CGCCGTCGCCATCGCGGTCGTGGTTGTNTTCGTCTGTTCGTGTACTCTGGATCGATCGATTGATCGGGCGCGGGTGGAGGAGGAGGAGGAGNAGGGTTTC ] [+] EMBL AU091450 [CGCCGTCGCCATCGCGGTCGTGGTTGTGTTCGTCTGTTCGTGTACTCTGGATCGATCGATTGATCGGGCGCGGGTGGAGGAGGAGGAGGAGGAGGGTTTCGAGGGGGTGTGCTAGGGTTTCGAGTGGAGGTGGGGGGAGGTTGAGCTCAGTTCATTCTTCTGTCGCCGTGGTGGGGGCGGGGGAGGCGGA CGNAATGCTATGCTGCTAGGCTGCTCGTCCCTGACGTCGTGGGTGCGTCGCCTCGTCGCCTGCGTTG GAAATTGTTTTGGATGTGCGAAA CTACT CCAATAA TAGCNG TGATGAG CTTC ] [+] EMBL AU173109 [CGCCGTCGCCATCGCGGTCGTGGTTGTGTTCGTCTGTTCGTGTACTCTGGATCGATCGATTGATCGGGCGCGGGTGGAGGAGGAGGAGGAGGAGGGTTTCGAGGGGGTGTGCTAGGGTTTCGAGTGGAGGTGGGGGGAGGTTGAGCTCAGTTCATTCTTCTGTCGCCGTGGTGGGGGCGGGGGAGGCGGAGCCGGATGCTATGCTGCTAGGCTGCTCGTCCCTGACGTCGTGGGTGCGTCGCCTCGTCGCCTGCGTTG GAAATTGTTTTGGATGTGCGAAACCTACT CCAATAA TAGCCGNTGATGAGCCTTCAAAAGGTTTAAGAATTCAAGGGCGC ] [+] EMBL OSR06911A [CGCCGTCGCCATCGCGGTCGTGGTTGTGTTCGTCTGTTCGTGTACTCTGGATCGATCGATTGATCGGGCGCGGGTGGAGGAGGAGGAGGAGGAGGGTTTCGAGGGGGTGTGCTAGGGTTTCGAGTGGAGGTGGGGGGAGGTTGAGCTCAGTTCATTCTTCTGTCGCCGTGGTGGGGGCGGGGGAGGCGGA CGNAATGCTATGCTGCTAGGCTGCTCGTCCCTGACGTCGTGGGTTCGTCGCCTCGTCGCCTGCGTTG GAAATTGTTTTGGATGTNCGAAACCTACT TCAATAA TAGCCGTTGAT ] [+] EMBL AU166188 [ AGCTCAGTTCATTCTTCTGTCGCCGTGGTGGGGGCGGGGGAGGCGGA CGNNATGCTATGCTGCTAGGCTGCTCGTCCCTGACGTCGTGGGTGCGTCGCCTCGTCGCCTGCGTTG GAAATTGTTTTGGATGTGCGAAACCTACT CCAATAA TAGCCGTTGATGAGCCTTCAAAAGGTTTAAGAATTCAAGGGCGCTCAATAAAG CAGCGGAGTTTGTCGGAGGACTTTTGGAGTTCAAG CCCGCCGGGAATGGAGAAT ] [+] EMBL AU091706 [ GACGTCGTGGGTGCGTCGCCTCGTCGCNTGCGTTG GAAATTGTTTTGGATGTGCGAAACCTACT CCAATAA TAGCCGTTGATGAGCCTTCAAAAGGTTTAAGAATTCAAGGGCGCTCAATAAAG CAGCGGAGTTTGTCGGAGGACTTTTGGAGTTCAAG CCCGCCGGGAATGGAGAATAGTGCCATGCAATCTCAGCGTAGCATGTCTTCAATCAGTACGGCAGCACAATCGAGCGATCAGCATGGAGCTGGAAGTAGCACCAACCCAAATGAGTTTGTAAATCAAGGACTTCTCCTGTGGAACCAGACTAGGCAACAGTGGGTTGGAAACAGAAGGCACAATTCTCAGCGTCAACAACCTCGAGAGCCAAAAATAAGTTGGAATGCTACATATGAGAGCCTTCTAGGAAGCACAAAACCATTTCCACAAGCGATCCCTCTTGGTGAAATGGTAGATTTCCTCGTGGACGGCTGGGAGCAGGAAGGCCTATATGATTAGTGGGTTAAATGAGTGATGAAGGGTGTTGTTTGTGGGGTCAAATTATGAATCACCGAGAATGTACTCAGAAAAACTTCAGCCTTTCAAA GCTTGTGGGTGATAACTGCGGTATTCCTGGAGACAGGATGGCATCCCTATCTTAAGTAAA CGTAACATATTCTTTACTGCTAATTGTGTTAACATAAaaaaaaa ] [+] EMBL AU030878 [ CTGCNTTG G AATTGTTTTGGATGTGCGAACCCTACTCCCAATAATTACCCGTTGATGANCCTTCAAAAGGTTTAAGAATTCAAGGGCGCTCAATAAAG CAGCGGAGTTTGTCGGAGGACTTTTGGAGTTCAAG CCCGCCGGGAATGGAGAATAGTGCCATGCAATCTCAGCGTAGCATGTCTTCAATCAGTACGGCAGCACAATCGAGCGATCAGCATGGAGCTGGAAGTAGCACCAACCCAAATGAGTTTGTAAATCAAGGACTTCTCCTGTGGAACCAGACTAGGCAACAGTGGGTTGGAAACAGAAGGCACAATTCTCAGCGTCAACAACCTCGAGAGCCAAAAATAAGTTGGAATGCTACATATGAGAGCCTTCTAGGAAGCACAAAACCATTTCCACAAGCGATCCCTCTTGGTGAAATGGTAGATTTCCTCGTGGACGGCTGGGAGCAGGAAGGCCTATATGATTAGTGGGTTAAATGAGTGATGAAGGGTGTTGTTTGTGGGGTCAAATTATGAATCACCGAGAATGTACTCAGAAAAACTTCAGCCTTTCAAA GCTTGTGGGTGATAACTGCGGTATTCCTGGAGACAGGATGGCATCCCTATCTTAAGTAAA CGTAACATATTCTTTAaaaa ] [+] EMBL BP184495 [ GGCGCTCAATAAAG CAGCGGAGTTTGTCGGAGGACTTTTGGAGTTCAAG CCCGCCGGGAATGGAGAATAGTGCCATGCAATCTCAGCGTAGCATGTCTTCAATCAGTACGGCAGCACAATCGAGCGATCAGCATGGAGCTGGAAGTAGCACCAACCCAAATGAGTTTGTAAATCAAGGACTTCTCCTGTGGAACCAGACTAGGCAACAGTGGGTTGGAAACAGAAGGCACAATTCTCAGCGTCAACAACCTCGAGAGCCAAAAATAAGTTGGAATGCTACATATGAGAGCCTTCTAGGAAGCACAAAACCATTTCCACAAGCGATCCCTCTTGGTGAAATGGTAGATTTCCTCGTGGACGGCTGGGAGCAGGAAGGCCTATATGATTAGTGGGTTAAATGAGTGATGAAGGGTGTTGGTTGTGGGGTCAAATTATGAATCACCGAGAATGTACTCAGAAAAACTTCAGCCTTTCAAA GCTTGTGGGTGATAACTGCGGTATTCCTGGAGACAGGATGGCATCCCTATCTTAAGTAAA CGTAACATATTCTTTACTGCTAATTGTGTTAACATAAGTTTCATATTGTGATATCTTCTCGCTGTGCATAATTGGACATTGTTATTACTA ] [+] EMBL AU030845 [ TCAATAAAGCCAGCGGAGTTTGTCGGAGGACTTTTGGNGTTCAAGCCCCGCCGGGAATGGAGAATAGTGCCATGCAATCTCAGCGTAGCATGTCTTCAATCAGTACGGCAGCACAATCGNGCGATCAGCATGGAGCTGGAAGTAGCACCAACCCAAATGAGTTTGTAAATCAAGGACTTCTCCTGTGGAACCAGACTAGGCAACAGTGGGTTGGAAACAGAAGGCACAATTCTCAGCGTCAACAACCTCGAGAGCCAAAAATAAGTTGGAATGCTACATATGAGAGCCTTCTAGGAAGCACAAAACCATTTCCACAAGCGATCCCTCTTGGTGAAATGGTAGATTTCCTCGTGGACGGCTGGGAGCAGGAAGGCCTATATGATTAGTGGGTTAAATGAGTGATGAAGGGTGTTGTTTGTGGGGTCAAATTATGAATCACCGAGAATGTACTCAGAAAAACTTCAGCCTTTCAAA GCTTGTGGGTGATAACTGCGGTATTCCTGGAGACAGGATGGCATCCCTATCTTAAGTAAA CGTAACATATTCTTTAaaaaaaa ] [-] EMBL CB685993 [ AAG CCCGCCGGGAATGGAGAATAGTGCCATGCAATCTCAGCGTAGCATGTCTTCAATCAGTCCGGCAGCACAATCGAGCGATCAGCATGGAGCTGGAAGTAGCACCAACCCAAATGAGTTTGTAAATCACGGACTTCTCCTGTGGAACCAGACTAGGCAACAGTGGGTCGGAAACAGAAGGCACAATTCTCAGAGTCAACAACCTCGAGAGCCAAAAATAAGTTGGAATGCTACATATGAGAGCCTTCTAGGAAGCACAAAACCATTTCCACAAGCGATCCCTCTTGGTGAAATGGTAGATTTCCTCGTGGACGGCTGGGAGCAGGAAGGCCTATATGATTAGTGGGTTAACTGAGTGATGAAGGGTGTTGTTTGCGGGGTCAAATTACGAATCACCGAGAATGTACTCAGAAAAACTTCAGCCTTTCAAATGCTTGTGGGTGATAACT ] [+] EMBL CB685992 [ ATGCAATCTCAGCGTAGCATGTCTTCAATCAGTACGGCAGCACAATCGAGCGATCACCATGGAGCTGGAAGTAGCACCAACCCAAATGAGTTTGTAAATCAAGGACTTCTCCTGTGGAACCAGACTAGGCAACAGTGGGTTGGAAACAGAAGGCACAATTCTCAGCGTCAACAACCTCGAGAGCCAAAAATAAGTTGGAATGCTACATATGAGAGCCTTCTAGGAAGCACAAAACCATTTCCACAAGCGATCCCTCTTGGTGAAATGGTAGATTTCCTCGTGGACGGCTGGGAGCAGGAAGGCCTATATGATTAGTGGGTTAAATGAGTGATGAAGGGCGTTGTTTGTGGGGTCAAATTATGAATCACCGAGAATGTACTCAGAAAAACTTCAGCCTTTCAAA GCTTGTGGGTGATAACTGCGGTATTCCTGGAGACAGGATGGCATCCCTATCTTAAGTAAA CGTAACATATTCTTTACTGCTAATTGTGTTAACATAAGTTTCATAT ] [+] EMBL AU173110 [ AAATGAGTTTGTAAATCAAGGACTTCTCCTGTGGAACCAGACTAGGCAACAGTGGGTTGGAAACAGAAGGCACAATTCTCAGCGTCAACAACCTCGAGAGCCAAAAATAAGTTGGAATGCTACATATGAGAGCCTTCTAGGAAGCACAAAACCATTTCCACAAGCGATCCCTCTTGGTGAAATGGTAGATTTCCTCGTGGACGGCTGGGAGCAGGAAGGCCTATATGATTAGTGGGTTAAATGAGTGATGAAGGGTGTTGTTTGTGGGGTCAAATTATGAATCACCGAGAATGTACTCAGAAAAACTTCAGCCTTTCAAA GCTTGTGGGTGATAACTGCGGTATTCCTGGAGACAGGATGGCATCCCTATCTTAAGTAAA CGTAACATATTCTTTACTGCTAATTGTGTTAACATAAaaaaaaa ] [+] EMBL AU184318 [ GTAAATCAAGGACTTCTCCTGTGGAACCAGACTAGGCAACAGTGGGTTGGAAACAGAAGGCACAATTTTCAGCGTCAACAACCTCGAGAGCCAAAAATAAGTTGGAATGCTACATATGAGAGCCTTNTAGGAAGCACAAAACCATTTCCNCAAGCGATCCCTCTTGGTGAAATGGTAGATTTCCTCGTGGACGGCTGGGAGCAGGAAGGCCTATATGATTAGTGGGTTAAATGAGTGATGAAGGGTGTTGTTTGTGGGGTCAAATTATGAATCNCCGAGAATGTACTCAGAAAAACTTCAGCCTTTCAAA GCTTGTGGGTGATAACTGCGGTATTCCTGGAGACAGGATGGCATCCCTATNTTAAGTAAACCGTAACATATTCTTTACTGCTAATTGTGTTAACATAAGTTTCATATTGTGAaaaaaaaa ] [+] EMBL AU184371 [ TCAAGGACTTCTCCTGTGGAACCAGACTAGGCAACAGTGGGTTGGAAACAGAAGGCACAATTTTCAGCGTCAACAACCTCGAGAGCCAAAAATAAGTTGGAATGCTACATATGAGAGCCTTNTAGGAAGCACAAAACCATTTCCACAAGCGATCCCTCTTGGTGAAATGGTAGATTTCCTCGTGGACGGCTGGGAGCAGGAAGGCCTATATGATTAGTGGGTTAAATGAGTGATGAAGGGTGTTGTTTGTGGGGTCAAATTATGAATCNCCGAGAATGTACTCAGAAAAACTTCAGCCTTTCAAA GCTTGTGGGTGATAACTGCGGTATTCCTGGAGACAGGATGGCATCCCTATNTTAAGTAAA CGTAACATATTCTTTACTGCTAATTGTGTTAACATAAGTTTCATATTGTGAaaaaaaaa ] [+] EMBL AU058327 [ AAGGACTTCTCCTGTGGAACCAGACTAGGCAACAGTGGGTTGGAAACAGAAGGCACAATTCTCAGCGTCAACAACCTCGAGAGCCAAAAATAAGTTGGAATGCTACATATGAGAGCCTTCTAGGAAGCACAAAACCATTTCCACAAGCGATCCCTCTTGGTGAAATGGTAGATTTCCTCGTGGACGGCTGGGAGCAGGAAGGCCTATATGATTAGTGGGTTAAATGAGTGATGAAGGGTGTTGTTTGTGGGGTCAAATTATGAATCACCGAGAATGTACTCAGAAAAACTTCAGCCTTTCAAA GCTTGTGGGTGATAACTGCGGTATTCCTGGAGACAGGATGGCATCCCTATCTTAAGTAAA CGTAACATATTCTTTACTGCTAATTGTGTTAACATAAGTTTCATATTGTGATATCTTCTCGCTGTGNATAAaata ] [-] EMBL BM422170 [ ACTAACTGACAAATTCACT C GTTTAGTGGT CATTAGCATNTTATACACACACTTTGCTGGCCATGGCTTTAGCTC CCAATGCCTCAGCAAACACCTCGCCGCC GCTGCGCTCTGGCGAGGCCACTGCACGCGGCGTCGCCGGT GCGGCGGCGGCTGCCAATTCTCAT GGCCGCTCAACTTTCGTGCCCTCTTCTCGTCGGCGGGAGCCGACGCCGCCGCCACCACCGGCGGCTGCGCTCCTGCGAAAGGCGGCGGTCACA CCGTGAGGTC CCGTCGTGGACCGCTCGCGCCGCCGCTGGCCGTGGCGAGACCTCCGCGACTTCGTCCCGCTCCGCCTCGTCGACGGCATCGGGAGCGCGCTGTCGCAGGTGGCGGAGACGCTGACCCGGCCGCTGACGGGGAAGGTGCGGGAGGACGAGGAGCGGTACAGGCTGCGGTTCGAGGTGCCGGGCCTCGGGAAGGACGACGTCCGCGTCTACGTGGACGACGGCGTGCTCGCCATCCACGGCGAGAAGCGCGACGTGGTGGA ] consensusID : consensus_15219#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 431 fasta sequence [CAAGGGGGGAGGCGGAGCCGGATGCTATGCTGCTAGGCTGCTCGTCCCTGACGTCGTGGGTGCGTCGCCTCGTCGCCTGCGTTGGAAATTGTTTTGGATGTGCGAAACCTACTCCAATAATAGCCGTTGATGAGCCTTCAAAAGGTTTAAGAATTCAAGGGCGCTCAATAAAGCAGCGGNGNTTGTCGGAGGACTTTTNTTNTTCAAGCCCGCCGGGAATGGAGAAATGTGCCATGCGGGGNNGAGCGTAGCANNCCCCCCNATCAGTACGGCAGCACAATCGAGCGATCAGCATGGAGCTGGAAGTANCACNAANANAAAANNAGTTTGTAAATCAAGGACTTCTCCTGTGGAACCAGACTAGGCAACAGTGGGTTGNAAACAGAAGGCACAATTCTCANCCTTCAACANCCCTCCNNCAGCNCAAAAAT] [+] EMBL CA766506 [CAAGGGGGGAGGCGGAGCCGGATGCTATGCTGCTAGGCTGCTCGTCCCTGACGTCGTGGGTGCGTCGCCTCGTCGCCTGCGTTGGAAATTGTTTTGGATGTGCGAAACCTACTCCAATAATAGCCGTTGATGAGCCTTCAAAAGGTTTAAGAATTCAAGGGCGCTCAATAAAGCAGCGGNGNTTGTCGGAGGACTTTTNTTNTTCAAGCCCGCCGGGAATGGAGAAATGTGCCATGCGGGGNNGAGCGTAGCANNCCCCCCNATCAGTACGGCAGCACAATCGAGCGATCAGCATGGAGCTGGAAGTANCACNAANANAAAANNAGTTTGTAAATCAAGGACTTCTCCTGTGGAACCAGACTAGGCAACAGTGGGTTGNAAACAGAAGGCACAATTCTCANCCTTCAACANCCCTCCNNCAGCNCAAAAAT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_15219#0 CGCCGTCGCCATCGCGGTCGTGGTTGTGTTCGTCTGTTCGTGTACTCTGGATCGATCGAT 60 consensus_15219#1 ------------------------------------------------------------ consensus_15219#0 TGATCGGGCGCGGGTGGAGGAGGAGGAGGAGGAGGGTTTCGAGGGGGTGTGCTAGGGTTT 120 consensus_15219#1 ------------------------------------------------------------ consensus_15219#0 CGAGTGGAGGTGGGGGGAGGTTGAGCTCAGTTCATTCTTCTGTCGCCGTGGTGGGGGCGG 180 consensus_15219#1 ------------------------------------------------------CAAGGG 6 ** consensus_15219#0 GGGAGGCGGAGCCGGATGCTATGCTGCTAGGCTGCTCGTCCCTGACGTCGTGGGTGCGTC 240 consensus_15219#1 GGGAGGCGGAGCCGGATGCTATGCTGCTAGGCTGCTCGTCCCTGACGTCGTGGGTGCGTC 66 ************************************************************ consensus_15219#0 GCCTCGTCGCCTGCGTTGGAAATTGTTTTGGATGTGCGAAACCTACTCCAATAATAGCCG 300 consensus_15219#1 GCCTCGTCGCCTGCGTTGGAAATTGTTTTGGATGTGCGAAACCTACTCCAATAATAGCCG 126 ************************************************************ consensus_15219#0 TTGATGAGCCTTCAAAAGGTTTAAGAATTCAAGGGCGCTCAATAAAGCAGCGGAGTTTGT 360 consensus_15219#1 TTGATGAGCCTTCAAAAGGTTTAAGAATTCAAGGGCGCTCAATAAAGCAGCGGNGNTTGT 186 ***************************************************** * **** consensus_15219#0 CGGAGGACTTTTGGAGTTCAAGCCCGCCGGGAATGGAGAATAGTGCCATGCAATCTC-AG 419 consensus_15219#1 CGGAGGACTTTTNTTNTTCAAGCCCGCCGGGAATGGAGAAATGTGCCATGCGGGGNNGAG 246 ************ ************************ ********* ** consensus_15219#0 CGTAGCATGTCTTC-AATCAGTACGGCAGCACAATCGAGCGATCAGCATGGAGCTGGAAG 478 consensus_15219#1 CGTAGCANNCCCCCCNATCAGTACGGCAGCACAATCGAGCGATCAGCATGGAGCTGGAAG 306 ******* * * ******************************************** consensus_15219#0 TAGCACCAACCCAAA-TGAGTTTGTAAATCAAGGACTTCTCCTGTGGAACCAGACTAGGC 537 consensus_15219#1 TANCACNAANANAAAANNAGTTTGTAAATCAAGGACTTCTCCTGTGGAACCAGACTAGGC 366 ** *** ** *** ****************************************** consensus_15219#0 AACAGTGGGTTGGAAACAGAAGGCACAATTCTCAGCGT-CAACAACCT--CGAGAGCC-A 593 consensus_15219#1 AACAGTGGGTTGNAAACAGAAGGCACAATTCTCANCCTTCAACANCCCTCCNNCAGCNCA 426 ************ ********************* * * ***** ** * *** * consensus_15219#0 AAAATAAGTTGGAATGCTACATATGAGAGCCTTCTAGGAAGCACAAAACCATTTCCACAA 653 consensus_15219#1 AAAAT------------------------------------------------------- 431 ***** consensus_15219#0 GCGATCCCTCTTGGTGAAATGGTAGATTTCCTCGTGGACGGCTGGGAGCAGGAAGGCCTA 713 consensus_15219#1 ------------------------------------------------------------ consensus_15219#0 TATGATTAGTGGGTTAAATGAGTGATGAAGGGTGTTGTTTGTGGGGTCAAATTATGAATC 773 consensus_15219#1 ------------------------------------------------------------ consensus_15219#0 ACCGAGAATGTACTCAGAAAAACTTCAGCCTTTCAAAGCTTGTGGGTGATAACTGCGGTA 833 consensus_15219#1 ------------------------------------------------------------ consensus_15219#0 TTCCTGGAGACAGGATGGCATCCCTATCTTAAGTAAACGTAACATATTCTTTACTGCTAA 893 consensus_15219#1 ------------------------------------------------------------ consensus_15219#0 TTGTGTTAACATAAGTTTCATATTGTGATATCTTCTCGCTGTGCATAATTGGACATTGTT 953 consensus_15219#1 ------------------------------------------------------------ consensus_15219#0 ATTACTAATCAATGTGCAGGCTCTGTTTAGTTTTTTTTTCTTTTTTTCCGCGAGGTGGAT 1013 consensus_15219#1 ------------------------------------------------------------ consensus_15219#0 ATGTGTCGCATCTGACGTCCTCTTGGCAATGCCTTTAGCTGATTGCCCCTTGTCCATTAG 1073 consensus_15219#1 ------------------------------------------------------------ consensus_15219#0 GCCATTACCGTGTTTATGCAGGCTCTACCAGAGGGTTTTGGATGTCTTCGCCTCCTTTCC 1133 consensus_15219#1 ------------------------------------------------------------ consensus_15219#0 AGATGCCTCTCTCCGGACTCCTGTCCTCGTGTTCTTTCTCGCTTTATATGCGAAACCCTT 1193 consensus_15219#1 ------------------------------------------------------------ consensus_15219#0 CACAGCAATACGATCGCATCGCCATCTTCAAGCAGAGTAACTAACTGACAAATTCACTTC 1253 consensus_15219#1 ------------------------------------------------------------ consensus_15219#0 ACTGCGGTTTAGTGGTGCATTAGCATTTTATACACACTTTGCTGGCCATGGCTTTAGCTC 1313 consensus_15219#1 ------------------------------------------------------------ consensus_15219#0 GCCAATGCCTCAGCAAACGCCTCGCCGCCGGCTGCGCTCTGGCGAGGCCACTGCACGCGG 1373 consensus_15219#1 ------------------------------------------------------------ consensus_15219#0 CGTCGCCGGTGGCGGCGGCGGCTGCCAATTCTCATGGGCCGCTCAACTTTCGTGCCCTCT 1433 consensus_15219#1 ------------------------------------------------------------ consensus_15219#0 TCTCGTCGGCGGGAGCCGACGCCGCCGCCACCACCGGCGGCTGCGCTCCTGCGAAAGGCG 1493 consensus_15219#1 ------------------------------------------------------------ consensus_15219#0 ACGGTCACAGCCGTGAGGTCGCCGTCGTGGACCGCTCGCGCCGCCGCTGGCCGTGGCGAG 1553 consensus_15219#1 ------------------------------------------------------------ consensus_15219#0 ACCTCCGCGACTTCGTCCCGCTCCGCCTCGTCGACGGCATCGGGAGCGCGCTGTCGCAGG 1613 consensus_15219#1 ------------------------------------------------------------ consensus_15219#0 TGGCGGAGACGCTGACCCGGCCGCTGACGGGGAAGGTGCGGGAGGACGAGGAGCGGTACA 1673 consensus_15219#1 ------------------------------------------------------------ consensus_15219#0 GGCTGCGGTTCGAGGTGCCGGGCCTCGGGAAGGACGACGTCCGCGTCTACGTGGACGACG 1733 consensus_15219#1 ------------------------------------------------------------ consensus_15219#0 GCGTGCTCGCCATCCACGGCGAGAAGCGCGACGTGGTGGAGGAGGACCGCGGCCGCGACG 1793 consensus_15219#1 ------------------------------------------------------------ consensus_15219#0 GCGACGGCGAGTGCTGGGCGGCGGCGACGTACCACGCCGGCCTGCTCCTCCCGGAGGACG 1853 consensus_15219#1 ------------------------------------------------------------ consensus_15219#0 CGGTGGCGGAGGGGATCACGGCGGAGGTGAGGGACGGCGTGCTGCACGTCACCGTGCCCC 1913 consensus_15219#1 ------------------------------------------------------------ consensus_15219#0 GCTCGCCGGAGAGGAAGAGGAGCGTCACCGAGGTCAAGGTGCGGTAGTAGCAGCGTGGAC 1973 consensus_15219#1 ------------------------------------------------------------ consensus_15219#0 TGAGCCTGGCTGCTTGGGCCTCGTTTGTATGGGCCTTTATCCCGGCCCATCTTGTGTATG 2033 consensus_15219#1 ------------------------------------------------------------ consensus_15219#0 GGCCTGGATTCTGTAATTAAGTACTGTATGGGCCTACTACCATAATGTGGCATTCTGGAG 2093 consensus_15219#1 ------------------------------------------------------------ consensus_15219#0 TTCTTTATTAATGCCACATTACCCTTTATGAATGGCCTCGTTCATAGTCTTGATGAATTT 2153 consensus_15219#1 ------------------------------------------------------------ consensus_15219#0 TGAGTG 2159 consensus_15219#1 ------ |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||