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Oryza sativa
cluster # 15239 cluster # 15239       Sequences # 20       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_15239#0 length = 1085 sequences # 2  
consensus_15239#1 length = 1036 sequences # 15  
consensus_15239#2 length = 984 sequences # 2  
consensus_15239#3 length = 443 sequences # 1  

consensusID : consensus_15239#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1085
fasta sequence
                              [GCTTGTGTGACCGGCTCCTACGGCCCTACCATTGAGGGTTCGCCTCCGATCTTCTGCCGGAACCCATAGCCATGAGGACTTCCCTTGTTCGTTTCTTCCTTACTATCCTCGCCAACACGTTTCTCCATTCCCCCTACCAGCACTCCTCACCTCCTGAATCATCCCAATGTTCGACGCCGCTTGGTAGCGAGAGTGGAGGAAAGAGGAGGCGGGGGAGGAGGGGGAAGCAGAAGGGCTTGGGTGAGGTGGTGTCTGTTCATGAGAAAAAGGAGGCAAAAACATCACCTTTCCCCCTCCTGCTGTTGTGCCGTGCAACGAGACGGCGGATCACAGAGGTGTATGATGAGATGTACCAAATTGTTCGTGCTAAAAGGAATGATACTGGCAGGGTTCACGAGTTCATTAACTGTTTGGTAGATGCAAGAAATGAACTGCTGCACAAGTCGGAGATGGTTCAAAGAAGCTGCGGAATAAAGAAGGCCTTACTATCCAACCCTTGTAGTCGCAGGGCTAACAGTTATGACCGCCTCTGCGAACAGCTGCATAAATTGGAAGCCGAGCACAAAAGGCTAAAGAAGGATGCGGATATCTACAACTATATTCAAGAGCAGCTTCAGATGTCAGAGTCATACAAACTGGTGATTGAGCTTAGTGCGTTGGTGGAGAANGCCAAACGTGANGATGCCCTTGCCACCGAGGCCGCAGAGATGACACTCGAGGAGCTGCTGGCTCAGGANAANANCGATGCCGNCTTCTGGCAGCGTCACAGGAAGCTGACCTCAATCNTACCC-AGTAGAGNTTGATAACTGACCGGGCGATTT-ANCATCGTC-ATAGTAGCCCGAACCCGT-ACCAGAANTTGTTCCTGGGGGAGCTTTTAATGTTGCTAGTTGCAACCGTGGTGTAATGCGCTTGCCAAGCTCTTGGGCGCCTGAAAGTCCAGAGTCCTTGACCATAAAACCTGAGAGATTCAGGTGGTTGGCTGACGACCAGCAAATGCTCTCATATATCCTATCTGGTACTTCGGCCATGAAGATTTCTTGCCTGTGGATGCCCTGATGGAATTGAGCTTTCTTCAATGCAAAAAA]

[+] EMBL CA764143             [GCTTGTGTGACCGGCTCCTACGGCCCTACCATTGAGGGTTCGCCTCCGATCTTCTGCCGGAACCCATAGCCATGAGGACTTCCCTTGTTCGTTTCTTCCTTACTATCCTCGCCAACACGTTTCTCCATTCCCCCTACCAGCACTCCTCACCTCCTGAATCATCCCAATGTTCGACGCCGCTTGGTAGCGAGAGTGGAGGAAAGAGGAGGCGGGGGAGGAGGGGGAAGCAGAAGGGCTTGGGTGAGGTGGTGTCTGTTCATGAGAAAAAGGAGGCAAAAACATCACCTTTCCCCCTCCTGCTGTTGTGCCGTGCAACGAGACGGCGGATCACAGAGGTGTATGATGAGATGTACCAAATTGTTCGTGCTAAAAGGAATGATACTGGCAGGGTTCACGAGTTCATTAACTGTTTGGTAGATGCAAGAAATGAACTGCTGCACAAGTCGGAGATGGTTCAAAGAAGCTGCGGAATAAAGAAGGCCTTACTATCCAACCCTTGTAGTCGCAGGGCTAACAGTTATGACCGCCTCTGCGAACAGCTGCATAAATTGGAAGCCGAGCACAAAAGGCTAAAGAAGGATGCGGATATCTACAACTATATTCAAGAGCAGCTTCAGATGTCAGAGTCATACAAACTGGTGATTGAGCTTAGTGCGTTGGTGGAGAANGCCAAACGTGANGATGCCCTTGCCACCGAGGCCGCAGAGATGACACTCGAGGAGCTGCTGGCTCAGGANAANANCGATGCCGNCTTCTGGCAGCGTCACAGGAAGCTGACCTCAATCNTACCC AGTAGAGNTTGATAACTGACCGGGCGATTT ANCATCGTC ATAGTAGCCCGAACCCGT ACCAGAANTTGTTCCTGGGGGA                                                                                                                                                                                                                       ]
[-] EMBL CF316779             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ACAGTTATGACCGCCTCTGCGAACAGGTGCATAAATTGGAAGCCGAGCACAAAAGGCTAAAGAAGGATGCGGATATCTACAACTATATTCAAGAGCAGCTTCAGATGTCAGAGTCATACAAACTGTTGATTGAGCTTAGTGCGTTGGTGGAGAAGGCCGAACGTGAGGATGCCCTTGCCACCGAGGCCGCAGAGATGACATTCGAGGAGCTGCTGGCTCAGGAGAAGAGCGACGCCGCCTTCTGGCAGCGTCACAGGAAGCTGACCTCAATCTTACCCAAGTAGAGTTTGATAACTGACCGCGCGATTTCACCATCGTCAATAGTAGCCCGAACCCGTAACCAGAATTTGTTCCTGGTGGAGCTTTTAATGTTGCTAGTTGCAACCGTGGTGTAATGCGCTTGCCAAGCTCTTGGGCGCCTGAAAGTCCAGAGTCCTTGACCATAAAACCTGAGAGATTCAGGTGGTTGGCTGACGACCAGCAAATGCTCTCATATATCCTATCTGGTACTTCGGCCATGAAGATTTCTTGCCTGTGGATGCCCTGATGGAATTGAGCTTTCTTCAATGCAAAAAA]


>consensus_15239#0 GCTTGTGTGACCGGCTCCTACGGCCCTACCATTGAGGGTTCGCCTCCGATCTTCTGCCGG AACCCATAGCCATGAGGACTTCCCTTGTTCGTTTCTTCCTTACTATCCTCGCCAACACGT TTCTCCATTCCCCCTACCAGCACTCCTCACCTCCTGAATCATCCCAATGTTCGACGCCGC TTGGTAGCGAGAGTGGAGGAAAGAGGAGGCGGGGGAGGAGGGGGAAGCAGAAGGGCTTGG GTGAGGTGGTGTCTGTTCATGAGAAAAAGGAGGCAAAAACATCACCTTTCCCCCTCCTGC TGTTGTGCCGTGCAACGAGACGGCGGATCACAGAGGTGTATGATGAGATGTACCAAATTG TTCGTGCTAAAAGGAATGATACTGGCAGGGTTCACGAGTTCATTAACTGTTTGGTAGATG CAAGAAATGAACTGCTGCACAAGTCGGAGATGGTTCAAAGAAGCTGCGGAATAAAGAAGG CCTTACTATCCAACCCTTGTAGTCGCAGGGCTAACAGTTATGACCGCCTCTGCGAACAGC TGCATAAATTGGAAGCCGAGCACAAAAGGCTAAAGAAGGATGCGGATATCTACAACTATA TTCAAGAGCAGCTTCAGATGTCAGAGTCATACAAACTGGTGATTGAGCTTAGTGCGTTGG TGGAGAANGCCAAACGTGANGATGCCCTTGCCACCGAGGCCGCAGAGATGACACTCGAGG AGCTGCTGGCTCAGGANAANANCGATGCCGNCTTCTGGCAGCGTCACAGGAAGCTGACCT CAATCNTACCCAGTAGAGNTTGATAACTGACCGGGCGATTTANCATCGTCATAGTAGCCC GAACCCGTACCAGAANTTGTTCCTGGGGGAGCTTTTAATGTTGCTAGTTGCAACCGTGGT GTAATGCGCTTGCCAAGCTCTTGGGCGCCTGAAAGTCCAGAGTCCTTGACCATAAAACCT GAGAGATTCAGGTGGTTGGCTGACGACCAGCAAATGCTCTCATATATCCTATCTGGTACT TCGGCCATGAAGATTTCTTGCCTGTGGATGCCCTGATGGAATTGAGCTTTCTTCAATGCA AAAAA



consensusID : consensus_15239#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 15
consensus length = 1036
fasta sequence
                              [CATGGACTAAGGAGTAGAAAGAGGGTTCGCCTCCGATCTTCTGCCGGAACCCATAGCCATGAGGACTTCCCTTGTTCGTTTCTTCCTTACTATCCTCGCCAACACGTTTCTCCATTCCCCCTACCAGCACTCCTCACCTCCTGAATCATCCCAATGTTCGACGCCGCTTGGTAGCGAGAGTGGAGGAAAGAGGAGGCGGGGGAGGAGGGGGAAGCAGAAGGGCTTGGGTGA-GGTGGTGTCTGTTCACGAGAAAAAGGAGGCAAAAACATCACCTTTCCCCCTCCTGCTGTTGTGCCGTGCAACGAGACGGCGGATCACAGAGGTGTATGATGAGATGTACCAAATTGTTCGTGCTAAAAGGAATGATACTGGCAAGGTTCACGAGTTCATTAACTGTTTGGTAGATGCAAGAAATGAACTGCTGCACAAGTCGGAGATGGTTCAAAGAAGCTGCAGAATAAAGAAGGCCTTACTATCCAACCCTTGTAGTCGCAGGGCTAACAGTTATGACCGCCTC-TGCGAACA-GGTGC-ATAAATTGGAA-GCCGAGCACAAAAGGCTAAAGAA-GGATGCGGATATC-T-AC-AACTATATTCAAGAGCAGCTTCAGATGTCAGAGTCAT-AC-AA-ACTGTTGATTGAGCTTAGTGCGTTGGTGGAGAAGGCC-GAACGTGAGGATGCCCTTGCCACCGAGGCCG-CAGAGATGACATTCGAGGAG-CTGCTGGCT-CA-GGAGAAGAGCGATGCCGCCTTCTGGCAGCGTCA-CA-GGAAGCTGACCTCAATCTTACCCA-AGTAGAGTTTGATAACTGA-CCGCGCGATTTCA-CCA-TCGTCA-ATAGTAGCCCGAACCCGTAACCA-GAA-TTTGTTCCTGGTGGAGCTTTTAATGTT-G-CTAGTTGCAA-CC--GTGGTGTAATGCGCTTGCCAAGCTCTTGGGCGCCTGAAAGTCCAGAGTCCTTGACCATAAAACCTGAGAGATTCAGGTGGTTGGCTGACGACCAGCAAATGCTCTCATATATCCTATCTGGTACTTCGGCCAAAAAAAAAAAAAAAAAAA]

[+] EMBL CF313868             [CATGGACTAAGGAGTAGAAAGAGGGTTCGCCTCCGATCTTCTGCCGGAACCCATAGCCATGAGGACTTCCCTTGTTCGTTTCTTCCTTACTATCCTCGCCAACACGTTTCTCCATTCCCCCTACCAGCACTCCTCACCTCCTGAATCATCCCAATGTTCGACGCCGCTTGGTAGCGAGAGTGGAGGAAAGAGGAGGCGGGGGAGGAGGGGGAAGCAGAAGGGCTTGGGTGA GGTGGTGTCTGTTCACGAGAAAAAGGAGGCAAAAACATCACCTTTCCCCCTCCTGCTGTTGTGCCGTGCAACGAGACGGCGGATCACAGAGGTGTATGATGAGATGTACCAAATTGTTCGTGCTAAAAGGAATGATACTGGCAAGGTTCACGAGTTCATTAACTGTTTGGTAGATGCAAGAAATGAACTGCTGCACAAGTCGGAGATGGTTCAAAGAAGCTGCAGAATAAAGAAGGCCTTACTATCCAACCCTTGTAGTCGCAGGGCTAACAGTTATGACCGCCTC TGCGAACA GGTGC ATAAATTGGAA GCCGAGCACAAAAGGCTAAAGAA GGATGCGGATATC T AC AACTATATTCAAGAGCAGCTTCAGATGTCAGAGTCAT AC AA ACT                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CF337436             [                      GGGTTCACCTCCGATCTTCTGCCGGAACCCATAGCCATGAGGACTTCCCTTGTTCGTTTCTTCCTTACTATCCTCGCCAACACGTTTCTCCATTCCCCCTACCAGCACTCCTCACCTCCTGAATCATCCCAATGTTCGACGCCGCTTGGTAGCGAGAGTGGAGGAAAGAGGAGGCGGGGGAGGAGGGAGAAGCAGAAGGGCTTGGGTGAGGGTGGTGTCTGTTCACGAGAAAAAGGAGGCAAAAACATCACCTTTCCCCCTCCTGCTGTTGTGCCGTGCAACGAGACGGCGGATCACAGAGGTGTATGATGAGATGTACCAAATTGTTCGTGCTAAAAGGAATGATACTGGCAAGGTTCACGAGTTCATTAACTGTTTGGTAGATGCAAGAAATGAACTGCTGCACAAGTCGGAGATGGTTCAAAGAAGCTGCAGAATAAAGAAGGCCTTACTATCCAACCCTTGTAGTCGCAGGGCTAACAGTTATGACCGCCTC TGCGAACA GGTGC ATAAATTGGAA GCCGAGCACAAAAGGCTAAAGAA GGATGCGGATATC T AC AACTATATTCAAGAGCAGCTTCAGATGTCAGAGTCAT AC AA ACT                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AK102992             [                             CCTCCGATCTTCTGCCGGAACCCATAGCCATGAGGACTTCCCTTGTTCGTTTCTTCCTTACTATCCTCGCCAACACGTTTCTCCATTCCCCCTACCAGCACTCCTCACCTCCTGAATCATCCCAATGTTCGACGCCGCTTGGTAGCGAGAGTGGAGGAAAGAGGAGGCGGGGGAGGAGGGGGAAGCAGAAGGGCTTGGGTGA GGTGGTGTCTGTTCACGAGAAGAAGGAGGCAAAAACATCACCTTTCCCCCTCCTGCTGTTGTGCCGTGCAACGAGACGGCGGATCACAGAGGTGTATGATGAGATGTACCAAATTGTTCGTGCTAAAAGGAATGATACTGGCAAGGTTCACGAGTTCATTAACTGTTTGGTAGATGCAAGAAATGAACTGCTGCACAAGTCGGAGATGGTTCAAAGAAGCTGCAGAATAAAGAAGGCCTTACTATCCAACCCTTGTAGTCGCAGGGCTAACAGTTATGACCGCCTC TGCGAACA GGTGC ATAAATTGGAA GCCGAGCACAAAAGGCTAAAGAA GGATGCGGATATC T AC AACTATATTCAAGAGCAGCTTCAGATGTCAGAGTCAT AC AA ACTGTTGATTGAGCTTAGTGCGTTGGTGGAGAAGGCC GAACGTGAGGATGCCCTTGCCACCGAGGCCG CAGAGATGACATTCGAGGAG CTGCTGGCT CA GGAGAAGAGCGACGCCGCCTTCTGGCAGCGTCA CA GGAAGCTGACCTCAATCTTACCCA AGTAGAGTTTGATAACTGA CCGCGCGATTTCA CCA TCGTCA ATAGTAGCCCGAACCCGTAACCA GAA TTTGTTCCTGGTGGAGCTTTTAATGTT G CTAGTTGCAA CC  GTGGTGTAATGCGCTTGCCAAGCTCTTGGGCGCCTGAAAGTCCAGAGTCCTTGACCATAAAACCTGAGAGATTCAGGTGGTTGGCTGACGACCAGCAAATGCTCTCATATATCCTATCTGG                             ]
[+] EMBL CF316778             [                                                                                 CTTCCTTACTATCCTCGCCAACACGTTTCTCCATTCCCCCTACCAGCACTCCTCACCTCCTGAATCATCCCAATGTTCGACGCCGCTTGGTAGCGAGAGTGGAGGAAAGAGGAGGCGGGGGAGGAGGGGGAAGCAGAAGGGCTTGGGTGA GGTGGTGTCTGTTCACGAGAAAAAGGAGGCAAAAACATCACCTTTCCCCCTCCTGCTGTTGTGCCGTGCAACGAGACGGCGGATCACAGAGGTGTATGATGAGATGTACCAAATTGTTCGTGCTAAAAGGAATGATACTGGCAAGGTTCACGAGTTCATTAACTGTTTGGTAGATGCAAGAAATGAACTGCTGCACAAGTCGGAGATGGTTCAAAGAAGCTGCAGAATAAAGAAGGCCTTACTATCCAACCCTTGTAGTCGCAGGGCTAACAGTTATGACCGCCTC TGCGAACA GGTGC ATAAATTGGAA GCCGAGCACAAAAGGCTAAAGAA GGATGCGGATATC T AC AACTATATTCAAGAGCAGCTTCAGATGTCAGAGTCAT AC AA ACTGTTGATTGAGCTTA                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CF320135             [                                                                                                                                                                                                                                                                                                                                                                                                                                                        GTTCAAAGAAGCTGCAGAATAAAGAAGGCCTTACTATCCAACCCTTGTAGTCGCAGGGCTAACAGTTATGACCGCCTC TGCGAACA GGTGC ATAAATTGGAA GCCGAGCACAAAAGGCTAAAGAA GGATGCGGATATC T AC AACTATATTCAAGAGCAGCTTCAGATGTCAGAGTCAT AC AA ACTGTTGATTGAGCTTAGTGCGTTGGTGGAGAAGGCC GAACGTGAGGATGCCCTTGCCACCGAGGCCG CAGAGATGACATTCGAGGAG CTGCTGGCT CA GGAGAAGAGCGACGCCGCCTTCTGGCAGCGTCA CA GGAAGCTGACCTCAATCTTACCCA AGTAGAGTTTGATAACTGA CCGCGCGATTTCA CCA TCGTCA ATAGTAGCCCGAACCCGTAACCA GAA TTTGTTCCTGGTGGAGCTTTTAATGTT G CTAGTTGCAA CC  GTGGTGTAATGCGCTTGCCAAGCTCTTGGGCGCCTGAAAGTCCAGAGTCCTTGACCATAAAACCTGAGAGATTCAGGTGGTTGGCTGACGACCAGCAAATGCTCTCATATATCCTATCTGGTA        AAAAAAAAAAAA       ]
[+] EMBL BI800243             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  aGCCTTACTATCCAACCCTTGTAGTCGCAGGGCTAACAGTTATGACCGCCTC TGCGAACA GGTGC ATAAATTGGAA GCCGAGCAC AAAGGCTAAAGAA GGATGCGGATATC T AC AACTATATTCAAGAGCAGCTTCAGATGTCAGAGTCAT AC  A ACTGTTGATTGAGCTTAGTGCGTTGGTGGAGAAGGCC  AACGTGAGGATGCCCTTGCCACCGAGGCCG CAGAGATGACATTCGAGGAG CTGCTGGCT CA GGAGAAGAGCGATGCCGCCTTCTGGCAGCGTCA CA GGAAGCTGACCTCAATCTTACCCA AGTAGAGTTTGATAACTGA CCGCGCGATTTCA CCA TCGTCA ATAGTAGCCCGAACCCGTAACCA GAA TTTGTTCCTGGTGGAGCTTTTAATGTT G CTAGTTGCAA CC  ATGGTGTAATGCGCTTCCCAAGCTCTTGGGCGCCTGAAAGTCCAGAGTCCTTGACCATAAAACCTGAGAGATTCAGGTGGTTGGCTGACGACCAGCAAAaa                                                 ]
[-] EMBL CF317977             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GCTAACAGTTATGACCGCCTC TGCGAACA GGTGC ATAAATTGGAA GCCGAGCACAAAAGGCTAAAGAA GGATGCGGATATC T AC AACTATATTCAAGAGCAGCTTCAGATGTCAGAGTCAT AC AA ACTGTTGATTGAGCTTAGTGCGTTGGTGGAGAAGGCC GAACGTGAGGATGCCCTTGCCACCGAGGCCG CAGAGATGACATTCGAGGAG CTGCTGGCT CA GGAGAAGAGCGACGCCGCCTTTTGGCAGCGTCA CA GGAAGCTGACCTCAATTTTACCCA AGTAGAGTTTGATAACTGA CCGCGCGATTTCA CCA TCGTCA ATAGTAGCCCGAACCCGTAACCA GAA TTTGTTCCTGGTGGAGCTTTTAATGTT G CTAGTTGCAA CC  GTGGTGTAATGCGCTTGCCAAGCTCTTGGGCGCCTGAAAGTCCAGAGTCCTTGACCATAAAACCTGAGAGATTCAGGTGGTTGGCTGACGACCAGCAAATGCTCTCATATATCCTATCTGGTACTTCGGCCAAAAAAAAA          ]
[+] EMBL BI799803             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TATGACCGCCTC TGCGAACA GGTGC ATAAATTGGAA GCCGAGCACAAAAGGCTAAAGAA GGATGCGGATATC T ACAAACTATATTCAAGAGCAGCTTCAGATGTCAGAGTCAT AC AA ACTGTTGATTGAGCTTAGTGCGTTGGTGGAGAAGGCC AAACGTGAGGATGCCCTTGCCACCGAGGCCG CAGAGATGACATTCGAGGAG CTGCTGGCT CA GGAGAAGAGCGATGCCGCCTTCTGGCAGCGTCA CA GGAAGCTGACCTCAATCTTACCCA AGTAGAGTTTGATAACTGA CCGCGCGATTTCA CCA TCGTCA ATAGTAGCCCGAACCCGTAACCA GAA TTTGTTCCTGGTGGAGCTTTTAATGTT G CTAGTTGCAA CC  ATGGTGTAATGCGCTTGCCAAGCTCTTGGGCGCCTGAAAGTCCAGAGTCCTTGACCATAAAACCTGAGAGATTCAGGTGGTTGGCTGACGACCAGCAAATGCTCTCATATATCCTATCTGGTACTTCGGCCAAAA               ]
[+] EMBL BI797124             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             acCCGCCTCGTGCGAACAGGGTGCAATGAATTGGAACGCCGAGCACAAAAGGCTAAAGAAGGGATGCGGATATC T AC AACTATATTCAAGA CAGCTTCAGATCTCAGAGTCAT ACAAA ACTGTTGATTGAGCTTAGTGCGTTGGTGGAGAAGGCC AAACGTGAGGATGCCCTT CCACCGA GCC  CAGAGATGACATTCGAGGAG CTGCTGGCT CA GGAGAAGAGCGATCCAACCTTCTGGCAGCGTCA CA GGAAGCTGACCTC ATCTTACCCA AGTAGAGTTTGATAACTGA CCGCGCGATTTCA CCA TCGTCA ATAGTAGCCCGAACCCGTAACCA GAACTTTGTTCCTGGTGGAGCTTTTAATGTTCGCCTAGTTCCAA CC  ATGGTGTAATGCGCTTGCCAAGCTCTTGGGCGCCTGAAAGTCCAGAGTCCTTGACCATAAAACCTGAGAGATTCA GT GTTGCCTGACGACCAGCAAATGCTCTCATATATCCTATCTGGTACTTCGcc                    ]
[+] EMBL BI798739             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GCGAACA GGTGC ATAAATTGGAA  CCGAGCACAAAAGGCTAAAGAA GGAT CGGATATC T AC AACTATATTCAAGACCAGCTTCAGATGTCAGAGTCAT AC CA ACTGTTGATTGAGCTTAGTGC TTGGTGGAGAAGCCCACAACGTGAGGATGCCCTTGCCACCGAGGCCGCCAGAGATGACATTCGAGGAG CTGCTGGCT CA GGAGAAGAGCGATGCCCCCTTCTGGCAGCGTCA CA GGAAGCTGACCTCAATCTTACCCA AGTAGAGTTTGATAACTGA CCGCGCGATTTCA CCA TCGTCA ATAGTAGCCCGAACCCGTAACCA GAA TTTGTTCCTGGTGGAGCTTTTAATGTT G CTAGTTGCAA CCCACTGGTGTAATGCGCTTGCCAAGCTCTTGGGCGCCTGAAAGTCCAGAGTCCTTGACCATAAAACCTGAGAGATTCAGGTGGTTGGCTGACGACCAGCAAATGCTCTCATATATCCTATCTGGTACTTCGGCCCAAAAAAAAAA        ]
[+] EMBL CF197315             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TAAATTGGAA GCCGAGCACAAAAGGCTAAAGAA GGATGCGGATATC T AC AACTATATTCAAGAGCAGCTTCAGATGTCAGAGTCAT AC AA ACTGTTGATTGAGCTTAGTGCGTTGGTGGAGAAGGCC AAACGTGAGGATGCCCTTGCCACCGAGGCCG CAGAGATGACATTCGAGGAG CTGCTGGCT CA GGAGAAGAGCGATGCCGCCTTCTGGCAGCGTCA CA GGAAGCTGACCTCAATCTTACCCA AGTAGAGTTTGATAACTGA CCGCGCGATTTCA CCA TCGTCA ATAGTAGCCCGAACCCGTAACCA GAA TTTGTTCCTGGTGGAGNNNNNAATGTT G CTAGTTGCAA CC  ATGGnnnn                                                                                                                                              ]
[+] EMBL BI798332             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TAAAGAA GGAT CGGATATC T AC AACTATATTCAAGACAAGCTTCAGATGTCAGAGTCAT AC  A ACTGTTGATTGAGCTTAGTGCGTTGGTGGAGAAGGCC AAACGTGAGGATGCCCTTGCCACCGAGGCCG CAGAGATGACATTCGAGGAG CTGCTGGCT CA GGAGAAGAGCGAT CCGCCTTCTGGCAGCGTCA CA GGAAGCTGACCTCAATCTTACCCA AGTAGAGTTTGATAACTGA CCGCGCGATTTCA CCA TCGTCA ATAGTAGCCCGAACCCGTAACCA GAA TTTGTTCCTGGTGGAGCTTTTAATGTT G CTAGTTGCAACCC  ATGGTGTAATGCGCTTGCCAAGCTCTTGGGCGCCTGAAAGTCCAGAGTCCTTGACCATAAAACCTGAGAGATTCAGGTGGTTGGCTGACGACCA C AATGCTCTCATATATCCTATCTGGTACTTC GCCAAAA               ]
[+] EMBL BI797560             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AGAA GGATCCGGATATCGTCAC CACTATATTCAAGACCAGCTTCAGATGTCAGAGTCATCAC CA ACTGTTGATTGAGCTTAGTGCCTTGGTGGAGAAGGCC CAACGTGAGGATGCCCTTGCCCCCGAGGCCC CAGAGATGACATTCGAGGAGCCTGCTGGCTCCACGGAGAAGAGCGATGCCCCCTTCTGGCAGCGTCACCACGGAAGCTGACCTCAATCTTACCCACAGTAGAGTTTGATAACTGACCCGCGCGATTTCACCCACTCGTCACATAGTAGCCCGAACCCGTAACCACGAA TTTGTTCCTGGTGGAGCTTTTAATGTT G CTAGTTGCCA CCA CTGGTGTAATGCGCTTGCC AGCTCTTGGGCGCCTGAAAGTCCCGAGTCCTTGACCATAAAACCTGAGAGATTCAGGTGGTTGGCTGACGACCAGCCAATGCTCTCATATATCCTATCTGGTACTTCGGCCCTGAAAAAAAAAA      ]
[+] EMBL CB667437             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AT AC AACCCTTTTGATTGAGCTTAGTGCGTTGGTGGAGAAGGCC GAACGTGAGGATGCCCTTGCCACCGAGGCCG CAGAGATGACATTCGAGGAG CTGCTGGCT CA GGAGAAGAGCGACGCCGCCTTCTGGCAGCGTCA CA GGAAGCTGACCTCAATCTTACCCA AGTAGAGTTTGATAACTGA CCGCGCGATTTCA CCA TCGTCA ATAGTAGCCCGAACCCGTAACCA GAA TTTGTTCCTGGTGGAGCTTTTAATGTT G CTAGTTGCAA CC  GTGGTGTAATGCGCTTGCCAAGCTCTTGGGCGCCTGAAAGTCCAGAGTCCTTGACCATAAAACCTGAGAGATTCAGGTGGTTGGCTGACGACCAGCAAATGCTCTCATATATCCTATCTGGTAC                          ]
[+] EMBL AU032813             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    AGTTTGATAACTGA CCGCGCGATTTCA CCA TCGTCA ATAGTAGCCCGAACCCGTAACCA GAA TTTGTTCCTGGTGGAGCTTTTAATGTT G CTAGTTNCAA CC  GTGGTGTAATGCGCTTGCCAAGCTCTTGGGCGCCTGAAAGTCCAGAGTCCTTGNCCATAAAACCTGAGAGATTCAGGTGGTTGGCTGACGACCAGCAAATGCTCTCATATATCCTATCTGGTACTTCGGCCAAAAAAAAAAAAAAAAAAA]


>consensus_15239#1 CATGGACTAAGGAGTAGAAAGAGGGTTCGCCTCCGATCTTCTGCCGGAACCCATAGCCAT GAGGACTTCCCTTGTTCGTTTCTTCCTTACTATCCTCGCCAACACGTTTCTCCATTCCCC CTACCAGCACTCCTCACCTCCTGAATCATCCCAATGTTCGACGCCGCTTGGTAGCGAGAG TGGAGGAAAGAGGAGGCGGGGGAGGAGGGGGAAGCAGAAGGGCTTGGGTGAGGTGGTGTC TGTTCACGAGAAAAAGGAGGCAAAAACATCACCTTTCCCCCTCCTGCTGTTGTGCCGTGC AACGAGACGGCGGATCACAGAGGTGTATGATGAGATGTACCAAATTGTTCGTGCTAAAAG GAATGATACTGGCAAGGTTCACGAGTTCATTAACTGTTTGGTAGATGCAAGAAATGAACT GCTGCACAAGTCGGAGATGGTTCAAAGAAGCTGCAGAATAAAGAAGGCCTTACTATCCAA CCCTTGTAGTCGCAGGGCTAACAGTTATGACCGCCTCTGCGAACAGGTGCATAAATTGGA AGCCGAGCACAAAAGGCTAAAGAAGGATGCGGATATCTACAACTATATTCAAGAGCAGCT TCAGATGTCAGAGTCATACAAACTGTTGATTGAGCTTAGTGCGTTGGTGGAGAAGGCCGA ACGTGAGGATGCCCTTGCCACCGAGGCCGCAGAGATGACATTCGAGGAGCTGCTGGCTCA GGAGAAGAGCGATGCCGCCTTCTGGCAGCGTCACAGGAAGCTGACCTCAATCTTACCCAA GTAGAGTTTGATAACTGACCGCGCGATTTCACCATCGTCAATAGTAGCCCGAACCCGTAA CCAGAATTTGTTCCTGGTGGAGCTTTTAATGTTGCTAGTTGCAACCGTGGTGTAATGCGC TTGCCAAGCTCTTGGGCGCCTGAAAGTCCAGAGTCCTTGACCATAAAACCTGAGAGATTC AGGTGGTTGGCTGACGACCAGCAAATGCTCTCATATATCCTATCTGGTACTTCGGCCAAA AAAAAAAAAAAAAAAA



consensusID : consensus_15239#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 984
fasta sequence
                              [CATGGACTGAGGAGTAGAAACGGAACCCATAGCCATGAGGGCTTCCCCTGTTCGTTTCCTCCTTACTATCCTCGCCAACACGTTTCTCCATTCCCCCTACCAGCACTCCTCACCTCCTGAATCATCCCAATGTTCGACGCCGCTTGGTAGCGAGAGTGGAGGAAAGAGGAGGCGGGGGAGGAGGGGGAAGCAGAAGGGCTTGGGTGAGGTGGTGTCTGTTCACGAGAAAAAGGAGGCAAAAACATCACCTTTCCCCCTCCTGCTGTTGTGCCGTGCAACGAGACGGCGGATCACAGAGGTGTATGATGAGATGTACCAAATTGTTCGTGCTAAAAGGAATGATACTGGCAAGGTTCACGAGTTCATTAACTGTTTGGTAGATGCAAGAAATGAACTGCTGCACAAGTCGGAGATGGTTCAAAGAAGCTGCAGAATAAAGAAGGCCTTACTATCCAACCCTTGTAGTCGCAGGGCTAACAGTTATGACCGCCTCTGCGAACAGGTGCATAAATTGGAAGCCGAGCACAAAAGGCTAAAGAAGGATGCGGATATCTACAACTATATTCAAGAGCAGCTTCAGATGTCAGAGTCATACAAACTGTTGATTGAGCTTAGTGCGTTGGTGGAGAAGGCCGAACGTGAGGATGCCCTTGCCACCGAGGCCGCAGAGATGACATTCGAGGAGCTGCTGGCTCAGGAGAAGAGCGACGCCGCCTTTTGGCAGCGTCACAGGAAGCTGACCTCAATTTTACCCAAGTAGAGTTTGATAACTGACCGCGCGATTTCACCATCGTCAATAGTAGCCCGAACCCGTAACCAGAATTTGTTCCTGGTGGAGCTTTTAATGTTGCTAGTTGCAACCGTGGTGTAATGCGCTTGCCAAGCTTTTGGGCGCCTGAAAGTCCAGAGTCCTTGACCATAAAACCTGAGAGATTCAGGTGGTTGGCTGACGACCAGCAAATGCTTTCATAAAAAAAAAAAAAA]

[+] EMBL CF320136             [CATGGACTGAGGAGTAGAAACGGAACCCATAGCCATGAGGGCTTCCCCTGTTCGTTTCCTCCTTACTATCCTCGCCAACACGTTTCTCCATTCCCCCTACCAGCACTCCTCACCTCCTGAATCATCCCAATGTTCGACGCCGCTTGGTAGCGAGAGTGGAGGAAAGAGGAGGCGGGGGAGGAGGGGGAAGCAGAAGGGCTTGGGTGAGGTGGTGTCTGTTCACGAGAAAAAGGAGGCAAAAACATCACCTTTCCCCCTCCTGCTGTTGTGCCGTGCAACGAGACGGCGGATCACAGAGGTGTATGATGAGATGTACCAAATTGTTCGTGCTAAAAGGAATGATACTGGCAAGGTTCACGAGTTCATTAACTGTTTGGTAGATGCAAGAAATGAACTGCTGCACAAGTCGGAGATGGTTCAAAGAAGCTGCAGAATAAAGAAGGCCTTACTATCCAACCCTTGTAGTCGCAGGGCTAACAGTTATGACCGCCTCTGCGAACAGGTGCATAAATTGGAAGCCGAGCACAAAAGGCTAAAGAAGGATGCGGATATCTACAACTATATTCAAGAGCAGCTTCAGATGTCAGAGTCATACAAACTGTTGATTGAGCTTAG                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CF313867             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AGTTATGACCGCCTCTGCGAACAGGTGCATAAATTGGAAGCCGAGCACAAAAGGCTAAAGAAGGATGCGGATATCTACAACTATATTCAAGAGCAGCTTCAGATGTCAGAGTCATACAAACTGTTGATTGAGCTTAGTGCGTTGGTGGAGAAGGCCGAACGTGAGGATGCCCTTGCCACCGAGGCCGCAGAGATGACATTCGAGGAGCTGCTGGCTCAGGAGAAGAGCGACGCCGCCTTTTGGCAGCGTCACAGGAAGCTGACCTCAATTTTACCCAAGTAGAGTTTGATAACTGACCGCGCGATTTCACCATCGTCAATAGTAGCCCGAACCCGTAACCAGAATTTGTTCCTGGTGGAGCTTTTAATGTTGCTAGTTGCAACCGTGGTGTAATGCGCTTGCCAAGCTTTTGGGCGCCTGAAAGTCCAGAGTCCTTGACCATAAAACCTGAGAGATTCAGGTGGTTGGCTGACGACCAGCAAATGCTTTCATAAAAAAAAAAAAAA]


>consensus_15239#2 CATGGACTGAGGAGTAGAAACGGAACCCATAGCCATGAGGGCTTCCCCTGTTCGTTTCCT CCTTACTATCCTCGCCAACACGTTTCTCCATTCCCCCTACCAGCACTCCTCACCTCCTGA ATCATCCCAATGTTCGACGCCGCTTGGTAGCGAGAGTGGAGGAAAGAGGAGGCGGGGGAG GAGGGGGAAGCAGAAGGGCTTGGGTGAGGTGGTGTCTGTTCACGAGAAAAAGGAGGCAAA AACATCACCTTTCCCCCTCCTGCTGTTGTGCCGTGCAACGAGACGGCGGATCACAGAGGT GTATGATGAGATGTACCAAATTGTTCGTGCTAAAAGGAATGATACTGGCAAGGTTCACGA GTTCATTAACTGTTTGGTAGATGCAAGAAATGAACTGCTGCACAAGTCGGAGATGGTTCA AAGAAGCTGCAGAATAAAGAAGGCCTTACTATCCAACCCTTGTAGTCGCAGGGCTAACAG TTATGACCGCCTCTGCGAACAGGTGCATAAATTGGAAGCCGAGCACAAAAGGCTAAAGAA GGATGCGGATATCTACAACTATATTCAAGAGCAGCTTCAGATGTCAGAGTCATACAAACT GTTGATTGAGCTTAGTGCGTTGGTGGAGAAGGCCGAACGTGAGGATGCCCTTGCCACCGA GGCCGCAGAGATGACATTCGAGGAGCTGCTGGCTCAGGAGAAGAGCGACGCCGCCTTTTG GCAGCGTCACAGGAAGCTGACCTCAATTTTACCCAAGTAGAGTTTGATAACTGACCGCGC GATTTCACCATCGTCAATAGTAGCCCGAACCCGTAACCAGAATTTGTTCCTGGTGGAGCT TTTAATGTTGCTAGTTGCAACCGTGGTGTAATGCGCTTGCCAAGCTTTTGGGCGCCTGAA AGTCCAGAGTCCTTGACCATAAAACCTGAGAGATTCAGGTGGTTGGCTGACGACCAGCAA ATGCTTTCATAAAAAAAAAAAAAA



consensusID : consensus_15239#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 443
fasta sequence
                              [GGATTCGGCCGATCTATATTCTAGNACATCTTCNGANNTCAGAGTCNNNCAACCTGTTGANTGANCTTAGTGCGTTGGTGGAGAAGGCCGAACGTGAGGATGCCCTTGCCACCGAGGNCGCAGAGATGACATTCGANGAGCTGCTGGCTCAGGAGAAGAGCGACGCCGCCTTCTGGCAGCGTCACAGGAAGCTGACCTCAATCTTACCCAAGTNGAGTTTGATAACTGACCGCGCGATTTCACCATCGTCAATAGTAGCCCGAACCCGTAACCAGAATTTGTTCCTGGTGGAGCTTTTAATGTTGCTAGTTGCAACCGTGGTGTNATGCGCTTGCCAAGCTCTTGGGCGCCTGAAAGTCCAGANTCCTTGACCATAAAACCTGAGANATTCANGTGGTTGGCTGACGACCAGCAAATGCTCTCATATATCCTATCTGGTACTT]

[+] EMBL AA752987             [GGATTCGGCCGATCTATATTCTAGNACATCTTCNGANNTCAGAGTCNNNCAACCTGTTGANTGANCTTAGTGCGTTGGTGGAGAAGGCCGAACGTGAGGATGCCCTTGCCACCGAGGNCGCAGAGATGACATTCGANGAGCTGCTGGCTCAGGAGAAGAGCGACGCCGCCTTCTGGCAGCGTCACAGGAAGCTGACCTCAATCTTACCCAAGTNGAGTTTGATAACTGACCGCGCGATTTCACCATCGTCAATAGTAGCCCGAACCCGTAACCAGAATTTGTTCCTGGTGGAGCTTTTAATGTTGCTAGTTGCAACCGTGGTGTNATGCGCTTGCCAAGCTCTTGGGCGCCTGAAAGTCCAGANTCCTTGACCATAAAACCTGAGANATTCANGTGGTTGGCTGACGACCAGCAAATGCTCTCATATATCCTATCTGGTACTT]


>consensus_15239#3 GGATTCGGCCGATCTATATTCTAGNACATCTTCNGANNTCAGAGTCNNNCAACCTGTTGA NTGANCTTAGTGCGTTGGTGGAGAAGGCCGAACGTGAGGATGCCCTTGCCACCGAGGNCG CAGAGATGACATTCGANGAGCTGCTGGCTCAGGAGAAGAGCGACGCCGCCTTCTGGCAGC GTCACAGGAAGCTGACCTCAATCTTACCCAAGTNGAGTTTGATAACTGACCGCGCGATTT CACCATCGTCAATAGTAGCCCGAACCCGTAACCAGAATTTGTTCCTGGTGGAGCTTTTAA TGTTGCTAGTTGCAACCGTGGTGTNATGCGCTTGCCAAGCTCTTGGGCGCCTGAAAGTCC AGANTCCTTGACCATAAAACCTGAGANATTCANGTGGTTGGCTGACGACCAGCAAATGCT CTCATATATCCTATCTGGTACTT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_15239#0      GCTTGTGTGACCGGCTCCTACGGCCCTACCATTGAGGGTTCGCCTCCGATCTTCTGCCGG 60
consensus_15239#2      -------------------------------------CATGGACTGAGGAGTAGAAACGG 23
consensus_15239#1      -----------CATGGACTAAGGAGTAGAAA--GAGGGTTCGCCTCCGATCTTCTGCCGG 47
consensus_15239#3      ------------------------------------------------------------
                                                                                   

consensus_15239#0      AACCCATAGCCATGAGGACTTCCCTTGTTCGTTTCTTCCTTACTATCCTCGCCAACACGT 120
consensus_15239#2      AACCCATAGCCATGAGGGCTTCCCCTGTTCGTTTCCTCCTTACTATCCTCGCCAACACGT 83
consensus_15239#1      AACCCATAGCCATGAGGACTTCCCTTGTTCGTTTCTTCCTTACTATCCTCGCCAACACGT 107
consensus_15239#3      ------------------------------------------------------------
                                                                                   

consensus_15239#0      TTCTCCATTCCCCCTACCAGCACTCCTCACCTCCTGAATCATCCCAATGTTCGACGCCGC 180
consensus_15239#2      TTCTCCATTCCCCCTACCAGCACTCCTCACCTCCTGAATCATCCCAATGTTCGACGCCGC 143
consensus_15239#1      TTCTCCATTCCCCCTACCAGCACTCCTCACCTCCTGAATCATCCCAATGTTCGACGCCGC 167
consensus_15239#3      ------------------------------------------------------------
                                                                                   

consensus_15239#0      TTGGTAGCGAGAGTGGAGGAAAGAGGAGGCGGGGGAGGAGGGGGAAGCAGAAGGGCTTGG 240
consensus_15239#2      TTGGTAGCGAGAGTGGAGGAAAGAGGAGGCGGGGGAGGAGGGGGAAGCAGAAGGGCTTGG 203
consensus_15239#1      TTGGTAGCGAGAGTGGAGGAAAGAGGAGGCGGGGGAGGAGGGGGAAGCAGAAGGGCTTGG 227
consensus_15239#3      ------------------------------------------------------------
                                                                                   

consensus_15239#0      GTGAGGTGGTGTCTGTTCATGAGAAAAAGGAGGCAAAAACATCACCTTTCCCCCTCCTGC 300
consensus_15239#2      GTGAGGTGGTGTCTGTTCACGAGAAAAAGGAGGCAAAAACATCACCTTTCCCCCTCCTGC 263
consensus_15239#1      GTGAGGTGGTGTCTGTTCACGAGAAAAAGGAGGCAAAAACATCACCTTTCCCCCTCCTGC 287
consensus_15239#3      ------------------------------------------------------------
                                                                                   

consensus_15239#0      TGTTGTGCCGTGCAACGAGACGGCGGATCACAGAGGTGTATGATGAGATGTACCAAATTG 360
consensus_15239#2      TGTTGTGCCGTGCAACGAGACGGCGGATCACAGAGGTGTATGATGAGATGTACCAAATTG 323
consensus_15239#1      TGTTGTGCCGTGCAACGAGACGGCGGATCACAGAGGTGTATGATGAGATGTACCAAATTG 347
consensus_15239#3      ------------------------------------------------------------
                                                                                   

consensus_15239#0      TTCGTGCTAAAAGGAATGATACTGGCAGGGTTCACGAGTTCATTAACTGTTTGGTAGATG 420
consensus_15239#2      TTCGTGCTAAAAGGAATGATACTGGCAAGGTTCACGAGTTCATTAACTGTTTGGTAGATG 383
consensus_15239#1      TTCGTGCTAAAAGGAATGATACTGGCAAGGTTCACGAGTTCATTAACTGTTTGGTAGATG 407
consensus_15239#3      ------------------------------------------------------------
                                                                                   

consensus_15239#0      CAAGAAATGAACTGCTGCACAAGTCGGAGATGGTTCAAAGAAGCTGCGGAATAAAGAAGG 480
consensus_15239#2      CAAGAAATGAACTGCTGCACAAGTCGGAGATGGTTCAAAGAAGCTGCAGAATAAAGAAGG 443
consensus_15239#1      CAAGAAATGAACTGCTGCACAAGTCGGAGATGGTTCAAAGAAGCTGCAGAATAAAGAAGG 467
consensus_15239#3      ------------------------------------------------------------
                                                                                   

consensus_15239#0      CCTTACTATCCAACCCTTGTAGTCGCAGGGCTAACAGTTATGACCGCCTCTGCGAACAGC 540
consensus_15239#2      CCTTACTATCCAACCCTTGTAGTCGCAGGGCTAACAGTTATGACCGCCTCTGCGAACAGG 503
consensus_15239#1      CCTTACTATCCAACCCTTGTAGTCGCAGGGCTAACAGTTATGACCGCCTCTGCGAACAGG 527
consensus_15239#3      ------------------------------------------------------------
                                                                                   

consensus_15239#0      TGCATAAATTGGAAGCCGAGCACAAAAGGCTAAAGAAGGATGCGGATATCTACAACTATA 600
consensus_15239#2      TGCATAAATTGGAAGCCGAGCACAAAAGGCTAAAGAAGGATGCGGATATCTACAACTATA 563
consensus_15239#1      TGCATAAATTGGAAGCCGAGCACAAAAGGCTAAAGAAGGATGCGGATATCTACAACTATA 587
consensus_15239#3      -------------------------------------GGATTCGGCCG-----ATCTATA 18
                                                            **** ***        * *****

consensus_15239#0      TTCAAGAGCAGCTTCAGATGTCAGAGTCATACAAACTGGTGATTGAGCTTAGTGCGTTGG 660
consensus_15239#2      TTCAAGAGCAGCTTCAGATGTCAGAGTCATACAAACTGTTGATTGAGCTTAGTGCGTTGG 623
consensus_15239#1      TTCAAGAGCAGCTTCAGATGTCAGAGTCATACAAACTGTTGATTGAGCTTAGTGCGTTGG 647
consensus_15239#3      TTCTAGNACATCTTCNGANNTCAGAGTCNNNCAACCTGTTGANTGANCTTAGTGCGTTGG 78
                       *** **  ** **** **  ********   *** *** *** *** *************

consensus_15239#0      TGGAGAANGCCAAACGTGANGATGCCCTTGCCACCGAGGCCGCAGAGATGACACTCGAGG 720
consensus_15239#2      TGGAGAAGGCCGAACGTGAGGATGCCCTTGCCACCGAGGCCGCAGAGATGACATTCGAGG 683
consensus_15239#1      TGGAGAAGGCCGAACGTGAGGATGCCCTTGCCACCGAGGCCGCAGAGATGACATTCGAGG 707
consensus_15239#3      TGGAGAAGGCCGAACGTGAGGATGCCCTTGCCACCGAGGNCGCAGAGATGACATTCGANG 138
                       ******* *** ******* ******************* ************* **** *

consensus_15239#0      AGCTGCTGGCTCAGGANAANANCGATGCCGNCTTCTGGCAGCGTCACAGGAAGCTGACCT 780
consensus_15239#2      AGCTGCTGGCTCAGGAGAAGAGCGACGCCGCCTTTTGGCAGCGTCACAGGAAGCTGACCT 743
consensus_15239#1      AGCTGCTGGCTCAGGAGAAGAGCGATGCCGCCTTCTGGCAGCGTCACAGGAAGCTGACCT 767
consensus_15239#3      AGCTGCTGGCTCAGGAGAAGAGCGACGCCGCCTTCTGGCAGCGTCACAGGAAGCTGACCT 198
                       **************** ** * *** **** *** *************************

consensus_15239#0      CAATCNTACCCA-GTAGAGNTTGATAACTGACCGGGCGATTT-ANCATCGTCA-TAGTAG 837
consensus_15239#2      CAATTTTACCCAAGTAGAGTTTGATAACTGACCGCGCGATTTCACCATCGTCAATAGTAG 803
consensus_15239#1      CAATCTTACCCAAGTAGAGTTTGATAACTGACCGCGCGATTTCACCATCGTCAATAGTAG 827
consensus_15239#3      CAATCTTACCCAAGTNGAGTTTGATAACTGACCGCGCGATTTCACCATCGTCAATAGTAG 258
                       ****  ****** ** *** ************** ******* * ******** ******

consensus_15239#0      CCCGAACCCGTA-CCAGAANTTGTTCCTGGGGGAGCTTTTAATGTTGCTAGTTGCAACCG 896
consensus_15239#2      CCCGAACCCGTAACCAGAATTTGTTCCTGGTGGAGCTTTTAATGTTGCTAGTTGCAACCG 863
consensus_15239#1      CCCGAACCCGTAACCAGAATTTGTTCCTGGTGGAGCTTTTAATGTTGCTAGTTGCAACCG 887
consensus_15239#3      CCCGAACCCGTAACCAGAATTTGTTCCTGGTGGAGCTTTTAATGTTGCTAGTTGCAACCG 318
                       ************ ****** ********** *****************************

consensus_15239#0      TGGTGTAATGCGCTTGCCAAGCTCTTGGGCGCCTGAAAGTCCAGAGTCCTTGACCATAAA 956
consensus_15239#2      TGGTGTAATGCGCTTGCCAAGCTTTTGGGCGCCTGAAAGTCCAGAGTCCTTGACCATAAA 923
consensus_15239#1      TGGTGTAATGCGCTTGCCAAGCTCTTGGGCGCCTGAAAGTCCAGAGTCCTTGACCATAAA 947
consensus_15239#3      TGGTGTNATGCGCTTGCCAAGCTCTTGGGCGCCTGAAAGTCCAGANTCCTTGACCATAAA 378
                       ****** **************** ********************* **************

consensus_15239#0      ACCTGAGAGATTCAGGTGGTTGGCTGACGACCAGCAAATGCTCTCATATATCCTATCTGG 1016
consensus_15239#2      ACCTGAGAGATTCAGGTGGTTGGCTGACGACCAGCAAATGCTTTCATAAAAAAAAAAAAA 983
consensus_15239#1      ACCTGAGAGATTCAGGTGGTTGGCTGACGACCAGCAAATGCTCTCATATATCCTATCTGG 1007
consensus_15239#3      ACCTGAGANATTCANGTGGTTGGCTGACGACCAGCAAATGCTCTCATATATCCTATCTGG 438
                       ******** ***** *************************** ***** *    *     

consensus_15239#0      TACTTCGGCCATGAAGATTTCTTGCCTGTGGATGCCCTGATGGAATTGAGCTTTCTTCAA 1076
consensus_15239#2      A----------------------------------------------------------- 984
consensus_15239#1      TACTTCGGCCAAAAAAAAAAAAAAAAAAA------------------------------- 1036
consensus_15239#3      TACTT------------------------------------------------------- 443
                                                                                   

consensus_15239#0      TGCAAAAAA 1085
consensus_15239#2      ---------
consensus_15239#1      ---------
consensus_15239#3      ---------
                                




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)