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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15318#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 1605 fasta sequence
[CCGAGTCGAATTGAAGTTATCAGGCGGCGGCCGGCTGGAGAGATGGCGTCGAGTACCAGCGACATCCCCGAGGGGAGGGAGAAGCTGAAGAGGTCAGGGAGTCTGGGGAGCAGCGACACGGCGTACGTGCGCGCCGACAAGATCGATCTCACCAGCCTAGATATCCAGCTCGAGAAGCAGCTTACCAAGACCTGGGGCAAGGCCAATCTCAAGGCGCATGGCCCCAAGGAGGACTGGGAGATCGACCTCGCTAAGCTCGAGATCCGGTACGTCATTGCTCAGGGGACCTACGGCACCGTGTATCGCGGCACGTATGATGGCCAAGATGTTGCAGTGAAGCTGTTGGATTGGGGAGAAGATGGTTTTGCCACAGAAGCTGAAACTGCTGCTTTGCGGACATCATTTAAGCAGGAGGTTGCAGTTTGGCATAAGCTCAGCCATCCTAATGTTACAAAGTTTGTTGGAGCCTCAATGGGGACTACAGATCTTAAGATTCCGACCAACAATTCCAATGCTGGTGCACGCACCAACTTGCCTGCCAGAGCATGTTGTGTTGTGGTTGAATATCTAGCTGGAGGAACTTTGAAGCAGTATCTGATAAAGAACAGTCGACGGAAGCTTGCATACAAAGTTGTAGTTCAGCTTGCATTGGATTTGGCCAGAGGATTGAGCTATCTCCACTCTAGAAAGATTGTACATCGTGATGTCAAAACTGAAAACATGCTCCTTGATACACAGAGAAACCTTAAAATTGCTGA-TTTTGGTGTTGCTCGGGTCGAGGCTCAGAATCCAAAGGATATGACTGGTGCGACAGGCACTCTTGGTTATATGG-CCCCAGAGGTTCTTGATGGTAAACCGTACAACAGGAAATGTGATGTTTATA-GTTTTGGAATTTGCTTATGGGAAATCTATTGTTGTGACATGCCATACCCAGACCTAAGTTTTGCCGATGTCTCATCTGCTGTTGT-CCATCAGAACCTGCGCCCAGAC--GTTCCTAG-ATGCT-GT-CCAA-GTGCATTC-GCAAATATCATGC-GGAAATGCTGGG-ATGCAAATCCTGATAAGCGTCCTGATATGGATGAGGTGGTGCAGCTTCTAGAGGCTCTTGACACAAGCAAAGGTGGTGGCATGATACCAGATGGTCAGTCATCTGGTTGCTTGTGCTTCACAAAGGCTCGTGGTCCATAGCTTCCTTTTCGTGATACAGTCTTCCCTTGACCGCGTTTTGCCCATCTACATAACTGGGAAAAACCATGGCATATGCTTCTCTTTGCCACCTGTGCAGTTTGGCGCTTACAATTCCCCATGGCTCCTTGCCATCTTTGTACGTTCGTTGCAGTTGTCATATGGGCCTTTGTGGTCAACAGCCTTTTTCTATAGCGGTGTGATATTGTAACAGTAATTCTTGAGAGAGTTGGTGACACTCCGTCACATGTATTATACTAGAGGGTTATACACACACATACCGGGT-CGTGCATTCTTGATACTTCTACGTTTCTGTGCGTTTGGTGCCACTGGTCAATACTTCTTTTGAATCATTTTTACTGTTCATATCCAAAATGAATACAATAAAGGGCGGAAAGATGTTTGTGTTCA--AAAAAAAAAACCTCG]
[+] EMBL CB677111 [CCGAGTCGAATTGAAGTTATCAGGCGGCGGCCGGCTGGAGAGATGGCGTCGAGTACCAGCGACATCCCCGAGGGGAGGGAGAAGCTGAAGAGGTCAGGGAGTCTGGGGAGCAGCGACACGGCGTACGTGCGCGCCGACAAGATCGATCTCACCAGCCTAGATATCCAGCTCGAGAAGCAGCTTACCAAGACCTGGGGCAAGGCCAATCTCAAGGCGCATGGCCCCAAGGAGGACTGGGAGATCGACCTCGCTAAGCTCGAGATCCGGTACGTCATTGCTCAGGGGACCTACGGCACCGTGTATCGCGGCACGTATGATGGCCAAGATGTTGCAGTGAAGCTGTTGGATTGGGGAGAAGATGGTTTTGCCACAGAAGCTGAAACTGCTGCTTTGCGGACATCATTTAAGCAGGAGGTTGCAGTTTGGCATAAGCTCAGCCATCCTAATGTTACAAAGTTTGTTGGAGCCTCAATGGGGACTACAGATCTTAAGATTCCGACCAACAATTCCAATGCTGGTGCACGCACCAACTTGCCTGCCAGAGCATGTTGTGTTGTGGTTGAATATCTAGCTGGAGGAACTTTGAAGCAGTATCTGATAAAGAACAGTCGACGGAAGCTTGCATACAAAGTTGTAGTTCAGCTTGCATTGGATTTGGCCAGAGGATTGAGCTATCTCCACTCTAGAAAGATTGTACATCGTGATGTCAAAACTGAAAACATGCTCCTTGATACACAGAGAAACCTTAAAATTGCTGA TTTTGGTGTTGCTCGGGTCGAGGCTCAGAAT CAAAGGATATGACTGGT ]
[+] EMBL CB096484 [ GCTTACCAAGACCTGGGGCAAGGCCAATCTCAAGGCGCAGGGCCCCAAGGAGGACTGGGAGATCGACCTCGCTAAGCTCGAGATCCGGTACGTCATTGCTCAGGGGACCTACGGCACCGTGTATCGCGGCACGTATGATGGCCAAGATGTTGCAGTGAAGCTGTTGGATTGGGGAGAAGATGGTTTTGCCACAGAAGCTGAAACTGCTGCTTTGCGGACATCATTTAAGCAGGAGGTTGCAGTTTGGCATAAGCTCAGCCATCCTAATGTTACAAAGTTTGTTGGAGCCTCAATGGGGACCACAGATCTTAAGATCCCGACCAACAATTCCAATGCTGGTGCACGCACCAACTTGCCTGCCAGAGCATGTTGTGTTGTGGTTGAATATCTAGCTGGAGGAACTTTGAAGCAGTATCTGATAAAGAACAGTCGACGGAAGCTTGCATACAAAGTTGTAGTTCAGCTTGCATTGGATTTGGCCAGAGGATTGAGCTATCTCCACTCTAGAAAGATTGTACATCGTGATGTCAAAACTGAAAACATGCTCCTTGATACACAGAGAAACCTTAAAATTGCTGATTTTTGGTGTTGCTCGGGTCGAGGCTCAGAATCCAAAGGATATGACTGGTGCGACAGGCACTCTTGGTTATATGGCCCCCAGAGGTTCTTGATGGTAAACCGTACAACAGGAAATGTGATGGTTATAGGTTTTGGAATTTGCTTATGGGAAATCTATTGNTGNGACATGCCATACCCAGACCTAAGTTTGGCCGATGTCTCATCTGCTGGTGT CCAT ]
[+] EMBL OSS15622A [ ATACAAAGTTGTAGTTCAGCTTGCATTGGATTTGGCCAGAGGATTGAGCTATCTCCACTCTAGAAAGATTGTACATCGTGATGTCAAAACTGAAAACATGCTCCTTGATACACAGAGAAACCTTAAAATTGCTGA TTTTGGTGTTGCTCGGGTCGAGGCTCAGAATCCAAAGGATATGACTGGTGCGACAGGCACTCTTGGTTATATGG CCCCAGAGGTTCTTGATGGTAAACCGTACAACAGGAAATGTGATGTTTATA GTTTTGGAATTTGCTTATGGGAAATCTATTGTTGTGACATGCCATACCCAGACCTAAGTTTTGCCGATGTCTCATCTGCTGTTGTCCCATCAGAACCTGCGGCCAGACGGGTTCCTAG ATGCT GTCCCAA GTGCATTCGGCAAATATCATGCGGGAAATNCTGGGNTTGCAAATCCTGATAAGng ]
[+] EMBL OSS15608A [ ATACAAAGTTGTAGTTCAGCTTGCATTGGATTTGGCCAGAGGATTGAGCTATCTCCACTCTAGAAAGATTGTACATCGTGATGTCAAAACTGAAAACATGCTCCTTGATACACAGAGAAACCTTAAAATTGCTGA TTTTGGTGTTGCTCGGGTCGAGGCTCAGAATCCAAAGGATATGACTGGTGCGACAGGCACTCTTGGTTATATGG CCCCAGAGGTTCTTGATGGTAAACCGTACAACAGGAAATGTGATGTTTATA GTTTTGGAATTTGCTTATGGGAAATCTATTGTTGTGACATGCCATACCCAGACCTAAGTTTTGCCGATGTCTCATCTGCTGTTGTCCCATCAGAACCTGCGGCCAGACG GTTCCTAGNATGCTGGT CCAAGGTGCATTC GCAAATATCATGC GGGAATGCTGGGg ]
[-] EMBL CB658303 [ TTTGGTGTTGCTCGGGTCGAGGCTCAGAATCCAAAGGATATGACTGGTGCGACAGGCACTCTTGGTTATATGG CCCCAGAGGTTCTTGATGGTAAACCGTACAACAGGAAATGTGATGTTTATA GTTTTGGAATTTGCTTATGGGAAATCTATTGTTGTGACATGCCATACCCAGACCTAAGTTTTGCCGATGTCTCATCTGCTGTTGT CCATCAGAACCTGCGCCCAGAC GTTCCTAG ATGCT GT CCAA GTGCATTC GCAAATATCATGC GGAAATGCTGGG ATGCAAATCCTGATAAGCGTCCTGATATGGATGAGGTGGTGCAGCTTCTAGAGGCTCTTGACACAAGCAAAGGTGGTGGCATGATACCAGATGGTCAGTCATCTGGTTGCTTGTGCTTCACAAAGGCTCGTGGTCCATAGCTTCCTTTTCGTGATACAGTCTTCCCTTGACCGCGTTTTGCC ]
[-] EMBL CB677112 [ AGGATATGACTGGTGCGACAGGCACTCTTGGTTATATGG CCCCAGAGGTTCTTGATGGTAAACCGTACAACAGGAAATGTGATGTTTATA GTTTTGGAATTTGCTTATGGGAAATCTATTGTTGTGACATGCCATACCCAGACCTAAGTTTTGCCGATGTCTCATCTGCTGTTGT CCATCAGAACCTGCGCCCAGAC GTTCCTAG ATGCT GT CCAA GTGCATTC GCAAATATCATGC GGAAATGCTGGG ATGCAAATCCTGATAAGCGTCCTGATATGGATGAGGTGGTGCAGCTTCTAGAGGCTCTTGACACAAGCAAAGGTGGTGGCATGATACCAGATGGTCAGTCATCTGGTTGCTTGTGCTTCACAAAGGCTCGTGGTCCATAGCTTCCTTTTCGTGATACAGTCTTCCCTTGACCGCGTTTTGCC ]
[-] EMBL CB676014 [ AGGATATGACTGGTGCGACAGGCACTCTTGGTTATATGG CCCCAGAGGTTCTTGATGGTAAACCGTACAACAGGAAATGTGATGTTTATA GTTTTGGAATTTGCTTATGGGAAATCTATTGTTGTGACATGCCATACCCAGACCTAAGTTTTGCCGATGTCTCATCTGCTGTTGT CCATCAGAACCTGCGCCCAGAC GTTCCTAG ATGCT GT CCAA GTGCATTC GCAAATATCATGC GGAAATGCTGGG ATGCAAATCCTGATAAGCGTCCTGATATGGATGAGGTGGTGCAGCTTCTAGAGGCTCTTGACACAAGCAAAGGTGGTGGCATGATACCAGATGGTCAGTCATCTGGTTGCTTGTGCTTCACAAAGGCTCGTGGTCCATAGCTTCCTTTTCGTGATACAGTCTTCCCTTGACCGCGTTTTGCC ]
[-] EMBL CB654893 [ AGAGGTTCTTGATGGTAAACCGTACAACAGGAAATGTGATGTTTATA GTTTTGGAATTTGCTTATGGGAAATCTATTGTTGTGACATGCCATACCCAGACCTAAGTTTTGCCGATGTCTCATCTGCTGTTGT CCATCAGAACCTGCGCCCAGAC GTTCCTAG ATGCT GT CCAA GTGCATTC GCAAATATCATGC GGAAATGCTGGG ATGCAAATCCTGATAAGCGTCCTGATATGGATGAGGTGGTGCAGCTTCTAGAGGCTCTTGACACAAGCAAAGGTGGTGGCATGATACCAGATGGTCAGTCATCTGGTTGCTTGTGCTTCACAAAGGCTCGTGGTCCATAGCTTCCTTTTCGTGATACAGTCTTCCCTTGACCGCGTTTTGCC ]
[-] EMBL CB644653 [ AGAGGTTCTTGATGGTAAACCGTACAACAGGAAATGTGATGTTTATA GTTTTGGAATTTGCTTATGGGAAATCTATTGTTGTGACATGCCATACCCAGACCTAAGTTTTGCCGATGTCTCATCTGCTGTTGT CCATCAGAACCTGCGCCCAGAC GTTCCTAG ATGCT GT CCAA GTGCATTC GCAAATATCATGC GGAAATGCTGGG ATGCAAATCCTGATAAGCGTCCTGATATGGATGAGGTGGTGCAGCTTCTAGAGGCTCTTGACACAAGCAAAGGTGGTGGCATGATACCAGATGGTCAGTCATCTGGTTGCTTGTGCTTCACAAAGGCTCGTGGTCCATAGCTTCCTTTTCGTGATACAGTCTTCCCTTGACCGCGTTTTGCC ]
[-] EMBL CB654892 [ ATGTTTATA GTTTTGGAATTTGTTTATGGGAAATCTATTGTTGTGACATGCCATACCCAGACCTAAGTTTTGCCGATGTCTCATCTGCTGTTGT CCATCAGAACCTGCGCCCAGAC GTTCCTAG ATGCT GT CCAA GTGCATTC GCAAATATCATGC GGAAATGCTGGG ATGCAAATCCTGATAAGCGTCCTGATATGGATGAGGTGGTGCAGCTTCTAGAGGCTCTTGACACAAGCAAAGGTGGTGGCATGATACCAGATGGTCAGTCATCTGGTTGCTTGTGCTTCACAAAGGCTCGTGGTCCATAGCTTCCTTTTCGTGATACAGTCTTCCCTTGACCGCGTTTTGCC ]
[-] EMBL CB676013 [ ATTTTTATA GTTTTGGAATTTGCTTATGGGAAATCTATTGTTGTGACATGCCATACCCAGACCTAAGTTTTGCCGATGTCTCATCTGCTGTTGT CCATCAGAACCTGCGCCCAGAC GTTCCTAG ATGCT GT CCAA GTGCATTC GCAAATATCATGC GGAAATGCTGGG ATGCAAATCCTGATAAGCGTCCTGATATGGATGAGGTGGTGCAGCTTTTAGAGGCTCTTGACACAAGCAAAGGTGGTGGCATGATACCAGATGGTCAGTCATCTGGTTGCTTGTGCTTCACAAAGGCTCGTGGTCCATAGCTTCCTTTTCGTGATACAGTCTTCCCTTGACCGCGTTTTGCC ]
[-] EMBL CB644652 [ TTATA GTTTTGGAATTTGCTTATGGGAAATCTATTGTTGTGACATGCCATACCCAGACTTAAGTTTTGCCGATGTCTCATCTGCTGTTGT CCATCAGAACCTGCGCCCAGAC GTTCCTAG ATGCT GT CCAA GTGCATTC GCAAATATCATGC GGAAATGCTGGG ATGCAAATCCTGATAAGCGTCCTGATATGGATGAGGTGGTGCAGCTTTTAGAGGCTCTTGACACAAGCAAAGGTGGTGGCATGATACCAGATGGTCAGTCATCTGGTTGCTTGTGCTTCACAAAGGCTCGTGGTCCATAGCTTCCTTTTCGTGATACAGTCTTCCCTTGACCGCGTTTTGCC ]
[-] EMBL CB658302 [ TCCTGATAAGCGTCCTGATATGAATGAGGTGGTGCAGATTATAGAGGCTCTTGACACAAGCAAAGGTGGTGGCATGATACCAGATGGTCAGTCATCTGGTTGCTTGTGATTCACAAAGGCTCGTGGTCCATAGCTTCCTTTTCATGATACAGTATTCCCTTGACCGAGTTTTGCCCATCTACATAACTGGGAAAAACCATGGCATATGCTTCTCTTTGCCACATGTGCAGTTTGGCGCTTACAATTCCCCATGGCTCCTTGCC ]
[+] EMBL BQ907531 [ CTCTTTGCCACCTGTGCAGTTTGGCGCTTACAATTCCCCATGGCTCCTTGCCATCTTTGTACGTTCGTTGCAGTTGTCATATGGGCCTTTGTGGTCAACAGTCTTTTTCTATAGCGGTGTGATATTGTAACAGTAATTCTTGAGAGAGTTGGTGACACTCCGTCACATGTATTATACTAGAGGGTTATACACACACATACCGGGT CGTGCATTCTTGATACTTCTACGTTTCTGTGCGTTTGGTGCCACTGGTCAATACTTCTTTTGAATCATTTTTACTGTTCATATCCAAAATGAATACAATAAAGGGCGGAAAGATGTTTGTGTTCA AAAAAAAA ]
[+] EMBL C22648 [ CTCTTTGCCACCTGTGCAGTTTGGCGCTTACAATTCCCCATGGCTCCTTGCCATCTTTGTACGTTCGTTGCAGTTGTCATATGGGCCTTTGTGGTCAACAGCCTTTTTCTATAGCGGTGTGATATTGTAACAGTAATTCTTGAGAGAGTTGGTGACACTCCGTCACATGTATTATACTAGAGGGTTATACACACACATACCGGGT CGTGCATTCTTGATAaaaaaaaaa ]
[+] EMBL C22649 [ CTCTTTGCCACCTGTGCAGTTTGGCGCTTACAATTCCCCATGGCTCCTTGCCATCTTTGTACGTTCGTTGCAGTTGTCATATGGGCCTTTGTGGTCAACAGCCTTTTTCTATAGCGGTGTGATATTGTAACAGTAATTCTTGAGAGAGTTGGTGACA TCCGTCACATGTATTATACTAGAGGGTTATACACACACATACCGGGTGCGTGNCNTCTTGATAaaaaaaaa ]
[-] EMBL CF326707 [ TCTTTGCCACCTGTGCAGTTTGGCGCTTACAATTCCCCATGGCTCCTTGCCATCTTTGTACGTTCGTTGCAGTTGTCATATGGGCCTTTGTGGTCAACAGCCTTTTTCTATAGCGGTGTGATATTGTAACAGTAATTCTTGAGAGAGTTGGTGACACTCCGTCACATGTATTATACTAGAGGGTTATACACACACATAACAGGT CGTGCATTCTTGATACTTCTACGTTTCTGTGCGTTTGGTGCCACTGGTCAATACTTCTTTTGAATCATTTTTACTGTTCATATCCAAAATGAATACAATAAAGGGCGGAAAGATGTTTGTGTTCAGCAAAAAAAAAACCTCG]
consensusID : consensus_15318#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 442 fasta sequence
[CACGAGACAAGGGGGATATGACTGGTGCGACAGGCACTCTTGGTTATATGGCCCCAGAGGTTCTTGATGGTAAACCGTACAACAGGAAATGTGATGTTTATAGTTTTGGAATTTGCTTATGGGAAATCTATTGTTGTGACATGCCATACCCAGACCTAAGTTTTGCCGATGTCTCATCTGCTGTTGTCCATCAGAACCTGCGCCCAGACGTTCCTAGATGCTGTCCAAGTGCATTCGCAAATATCATGCGGAAATGCTGGGATGCAAATCCTGATAAGCGTCCTGATATGGATGAGGTGGTGCAGCTTCTAGAGGCTCTTGACACAAGCAAAGGTGGTGGCATGATACCAGATGGTCAGTCATCTGGTTGCCTGTGCTTCACAAAGGCTCGTGGTCCATAGCTTCCTTTTCGTGATACAGTCTTCCCTTAACCGCGTTTTGC]
[+] EMBL CA767378 [CACGAGACAAGGGGGATATGACTGGTGCGACAGGCACTCTTGGTTATATGGCCCCAGAGGTTCTTGATGGTAAACCGTACAACAGGAAATGTGATGTTTATAGTTTTGGAATTTGCTTATGGGAAATCTATTGTTGTGACATGCCATACCCAGACCTAAGTTTTGCCGATGTCTCATCTGCTGTTGTCCATCAGAACCTGCGCCCAGACGTTCCTAGATGCTGTCCAAGTGCATTCGCAAATATCATGCGGAAATGCTGGGATGCAAATCCTGATAAGCGTCCTGATATGGATGAGGTGGTGCAGCTTCTAGAGGCTCTTGACACAAGCAAAGGTGGTGGCATGATACCAGATGGTCAGTCATCTGGTTGCCTGTGCTTCACAAAGGCTCGTGGTCCATAGCTTCCTTTTCGTGATACAGTCTTCCCTTAACCGCGTTTTGC]
consensusID : consensus_15318#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 419 fasta sequence
[TAAGACCCCACTGGGCACTATGGCCTCTCTCCTTGTGCCACCCTGGGCCACGCTTTGGCGCCTTACCACAGTTCCCCACTGGCTCCCTTGCCCACTTCTTTGTACACGCTTCGCTGTGCCACGTGTGTCCACTATGGGCCCTCTTGTGGTCACACCACGTTCTCTTTTCTATAGCCGGTGTGATATTGTAACCACGTAATTTTCTTGAGAGGAGTTGGTGACCACCTCCGTCACCACTGTATTATACTAGAGGGTTATACACCACCACCACTACCGGGTCGTGCACTTCTTGATACTTCTACGTTTCTGTGCGTTTGGTGCCCCCTGGTCACATACTTCTTTTGAATCACTTTTTACCTGTTCATATCCCAAATGAATACCATAAAGGGCGGAAAGATGTTTGTGTTCCAAAAAAAAAA]
[+] EMBL BI812694 [TAAGACCCCACTGGGCACTATGGCCTCTCTCCTTGTGCCACCCTGGGCCACGCTTTGGCGCCTTACCACAGTTCCCCACTGGCTCCCTTGCCCACTTCTTTGTACACGCTTCGCTGTGCCACGTGTGTCCACTATGGGCCCTCTTGTGGTCACACCACGTTCTCTTTTCTATAGCCGGTGTGATATTGTAACCACGTAATTTTCTTGAGAGGAGTTGGTGACCACCTCCGTCACCACTGTATTATACTAGAGGGTTATACACCACCACCACTACCGGGTCGTGCACTTCTTGATACTTCTACGTTTCTGTGCGTTTGGTGCCCCCTGGTCACATACTTCTTTTGAATCACTTTTTACCTGTTCATATCCCAAATGAATACCATAAAGGGCGGAAAGATGTTTGTGTTCCAAAAAAAAAA]
consensusID : consensus_15318#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 132 fasta sequence
[GGAGTAGAAAACTCCGTCACATGTATTATACTAGAGGGTTATACACACACATACCGGGTCGTGCATTCTTGATACTTCTACGTTTCTGTGCGTTTGGTGCCACTGGTCAATACTTCTTTTGAATCAAAAAAA]
[+] EMBL CF308288 [GGAGTAGAAAACTCCGTCACATGTATTATACTAGAGGGTTATACACACACATACCGGGTCGTGCATTCTTGATACTTCTACGTTTCTGTGCGTTTGGTGCCACTGGTCAATACTTCTTTTGAATCAAAAAA ]
[-] EMBL CF308287 [ CATGTATTATACTAGAGGGTTATACACACACATACCGGGTCGTGCATTCTTGATACTTCTACGTTTCTGTGCGTTTGGTGCCACTGGTCAATACTTCTTTTGAATCAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_15318#2 ------------------------------------------------------------
consensus_15318#3 ------------------------------------------------------------
consensus_15318#0 CCGAGTCGAATTGAAGTTATCAGGCGGCGGCCGGCTGGAGAGATGGCGTCGAGTACCAGC 60
consensus_15318#1 ------------------------------------------------------------
consensus_15318#2 ------------------------------------------------------------
consensus_15318#3 ------------------------------------------------------------
consensus_15318#0 GACATCCCCGAGGGGAGGGAGAAGCTGAAGAGGTCAGGGAGTCTGGGGAGCAGCGACACG 120
consensus_15318#1 ------------------------------------------------------------
consensus_15318#2 ------------------------------------------------------------
consensus_15318#3 ------------------------------------------------------------
consensus_15318#0 GCGTACGTGCGCGCCGACAAGATCGATCTCACCAGCCTAGATATCCAGCTCGAGAAGCAG 180
consensus_15318#1 ------------------------------------------------------------
consensus_15318#2 ------------------------------------------------------------
consensus_15318#3 ------------------------------------------------------------
consensus_15318#0 CTTACCAAGACCTGGGGCAAGGCCAATCTCAAGGCGCATGGCCCCAAGGAGGACTGGGAG 240
consensus_15318#1 ------------------------------------------------------------
consensus_15318#2 ------------------------------------------------------------
consensus_15318#3 ------------------------------------------------------------
consensus_15318#0 ATCGACCTCGCTAAGCTCGAGATCCGGTACGTCATTGCTCAGGGGACCTACGGCACCGTG 300
consensus_15318#1 ------------------------------------------------------------
consensus_15318#2 ------------------------------------------------------------
consensus_15318#3 ------------------------------------------------------------
consensus_15318#0 TATCGCGGCACGTATGATGGCCAAGATGTTGCAGTGAAGCTGTTGGATTGGGGAGAAGAT 360
consensus_15318#1 ------------------------------------------------------------
consensus_15318#2 ------------------------------------------------------------
consensus_15318#3 ------------------------------------------------------------
consensus_15318#0 GGTTTTGCCACAGAAGCTGAAACTGCTGCTTTGCGGACATCATTTAAGCAGGAGGTTGCA 420
consensus_15318#1 ------------------------------------------------------------
consensus_15318#2 ------------------------------------------------------------
consensus_15318#3 ------------------------------------------------------------
consensus_15318#0 GTTTGGCATAAGCTCAGCCATCCTAATGTTACAAAGTTTGTTGGAGCCTCAATGGGGACT 480
consensus_15318#1 ------------------------------------------------------------
consensus_15318#2 ------------------------------------------------------------
consensus_15318#3 ------------------------------------------------------------
consensus_15318#0 ACAGATCTTAAGATTCCGACCAACAATTCCAATGCTGGTGCACGCACCAACTTGCCTGCC 540
consensus_15318#1 ------------------------------------------------------------
consensus_15318#2 ------------------------------------------------------------
consensus_15318#3 ------------------------------------------------------------
consensus_15318#0 AGAGCATGTTGTGTTGTGGTTGAATATCTAGCTGGAGGAACTTTGAAGCAGTATCTGATA 600
consensus_15318#1 ------------------------------------------------------------
consensus_15318#2 ------------------------------------------------------------
consensus_15318#3 ------------------------------------------------------------
consensus_15318#0 AAGAACAGTCGACGGAAGCTTGCATACAAAGTTGTAGTTCAGCTTGCATTGGATTTGGCC 660
consensus_15318#1 ------------------------------------------------------------
consensus_15318#2 ------------------------------------------------------------
consensus_15318#3 ------------------------------------------------------------
consensus_15318#0 AGAGGATTGAGCTATCTCCACTCTAGAAAGATTGTACATCGTGATGTCAAAACTGAAAAC 720
consensus_15318#1 ------------------------------------------------------------
consensus_15318#2 ------------------------------------------------------------
consensus_15318#3 ------------------------------------------------------------
consensus_15318#0 ATGCTCCTTGATACACAGAGAAACCTTAAAATTGCTGATTTTGGTGTTGCTCGGGTCGAG 780
consensus_15318#1 ------------------------------------------------------------
consensus_15318#2 ------------------------------------------------------------
consensus_15318#3 ------------------------------------------------------------
consensus_15318#0 GCTCAGAATCCAAAGGATATGACTGGTGCGACAGGCACTCTTGGTTATATGGCCCCAGAG 840
consensus_15318#1 ------------------------------------------------------------
consensus_15318#2 ------------------------------------------------------------
consensus_15318#3 ------------------------------------------------------------
consensus_15318#0 GTTCTTGATGGTAAACCGTACAACAGGAAATGTGATGTTTATAGTTTTGGAATTTGCTTA 900
consensus_15318#1 ------------------------------------------------------------
consensus_15318#2 ------------------------------------------------------------
consensus_15318#3 ------------------------------------------------------------
consensus_15318#0 TGGGAAATCTATTGTTGTGACATGCCATACCCAGACCTAAGTTTTGCCGATGTCTCATCT 960
consensus_15318#1 ------------------------------------------------------------
consensus_15318#2 ------------------------------------------------------------
consensus_15318#3 ------------------------------------------------------------
consensus_15318#0 GCTGTTGTCCATCAGAACCTGCGCCCAGACGTTCCTAGATGCTGTCCAAGTGCATTCGCA 1020
consensus_15318#1 ------------------------------------------------------------
consensus_15318#2 ------------------------------------------------------------
consensus_15318#3 ------------------------------------------------------------
consensus_15318#0 AATATCATGCGGAAATGCTGGGATGCAAATCCTGATAAGCGTCCTGATATGGATGAGGTG 1080
consensus_15318#1 ------------------------------------------------------------
consensus_15318#2 ------------------------------------------------------------
consensus_15318#3 ------------------------------------------------------------
consensus_15318#0 GTGCAGCTTCTAGAGGCTCTTGACACAAGCAAAGGTGGTGGCATGATACCAGATGGTCAG 1140
consensus_15318#1 ------------------------------------------------------------
consensus_15318#2 -----------------------------------------------------TAAGACC 7
consensus_15318#3 ------------------------------------------------------------
consensus_15318#0 TCATCTGGTTGCTTGTGCTTCACAAAGGCTCGTGGTCCATAGCTTCCTTTTCGTGATACA 1200
consensus_15318#1 ------------------------------------------CACGAGACAAGGGGGATA 18
consensus_15318#2 CCACTGGGCACTATGGCCTCTCTCCTTGTGCCACCCTGGG------CCACGCTTTGGCGC 61
consensus_15318#3 ------------------------------------------------------------
consensus_15318#0 GTCTTCCCTTGACCGCGTTTTGCCCATCTACATAACTGGG------AAAAACCATGGCAT 1254
consensus_15318#1 TGACTGGTGCGACAGGCACTCTTGGTTATATGGCCCCAGAGGTTCTTGATGGTAAACCGT 78
consensus_15318#2 CTTACCACAGTTCCCCACTGGCTCCCTTGCCCACTTCTTTGTACACGCTTCGCTGTGCCA 121
consensus_15318#3 ------------------------------------------------------------
consensus_15318#0 AT-GCTTCTCTTTGCCACCTGTGCAGTTTGGCGCTTACAATTCCCCATGGCTCCTTGCCA 1313
consensus_15318#1 ACAACAGGAAATGTGATGTTTATAGTTTTGGAATTTGCTTATGGGAAATCTATTGTTGTG 138
consensus_15318#2 CGTGTGTCCACTATGGGCCCTCTTGTGGTCACACCACGTTCTCTTT--TCTAT-AGCCGG 178
consensus_15318#3 ------------------------------------------------------------
consensus_15318#0 TCTTTGTACGTTCGTTGCAGTTGTCATATGGGCCTTTGTGGTCAACAGCCTTT-TTCTAT 1372
consensus_15318#1 ACATGCCATACCCAGACCTAAGTTTTGCCGATGTCTCATCTGCTGTTGTCCATCAGAACC 198
consensus_15318#2 TGTGATATTGTAACCACGTAATTTTCTTGAGAGGAGTTGGTGACCACCTCCGTCACCACT 238
consensus_15318#3 --------------------------------GGAGTAGAAAAC----TCCGTCACA--T 22
consensus_15318#0 AGCGGTGTGATATTGTAACAGTAATTCTTGAGAGAGTTGGTGACA--CTCCGTCACA--T 1428
consensus_15318#1 TGCGCCCAGACGTTCCTAGATGCTGTCCAAGTGCATTCGCAAATATCATGCGGAAATGCT 258
* * * * * ** * *
consensus_15318#2 GTATTATACTAGAGGGTTATACACCACCACCACTACCGGGTCGTGCACTTCTTGATACTT 298
consensus_15318#3 GTATTATACTAGAGGGTTATACACACACA----TACCGGGTCGTGCA-TTCTTGATACTT 77
consensus_15318#0 GTATTATACTAGAGGGTTATACACACACA----TACCGGGTCGTGCA-TTCTTGATACTT 1483
consensus_15318#1 GGGATGCAA-ATCCTGATAAGCGTCCTGATATGGATGAGGTGGTGCAGCTTCTAGAGGCT 317
* * * * * ** * * * *** ***** * * *
consensus_15318#2 CTACGTTTCTGTGCGTTTGGTGCCCCCTGGTCACATACTTCTT--TTGAATCACTTTTTA 356
consensus_15318#3 CTACGTTTCTGTGCGTTTGGTGCCAC-TGGTCA-ATACTTCTT--TTGAATCAAAAAAA- 132
consensus_15318#0 CTACGTTTCTGTGCGTTTGGTGCCAC-TGGTCA-ATACTTCTT--TTGAATCATTTTTA- 1538
consensus_15318#1 CTTGACACAAGCAAAGGTGGTGGCATGATACCAGATGGTCAGTCATCTGGTTGCCTGTGC 377
** * ***** * ** ** * * * *
consensus_15318#2 CCTGTTCATATCCCAAATGAATACCATAAAGGGCGGAAAGATGTTTGTGTTCCAAAAAAA 416
consensus_15318#3 ------------------------------------------------------------
consensus_15318#0 -CTGTTCATATCCAAAATGAATACAATAAAGGGCGGAAAGATGTTTGTGTTCAAAAAAAA 1597
consensus_15318#1 TTCACAAAGGCTCGTGGTCCATAGCTTCCTTTTCGTGATACAGTCTTCCCTTAACCGCGT 437
consensus_15318#2 AAA----- 419
consensus_15318#3 --------
consensus_15318#0 AAACCTCG 1605
consensus_15318#1 TTTGC--- 442
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||