cluster # 1539

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Oryza sativa
cluster # 1539 cluster # 1539 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1539#0 length = 928 sequences # 2

consensusID : consensus_1539#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 928
fasta sequence

                              [CACGTAGGTAGCTAGATAATTAAGCAGGCATGGCAGCAATGGCGGCGGCGGCGACGACGACGACGAAGAAGCTGCAGGTGGCTTCATCATCACCAAACACACACAAATCATATTGGAGCACGAAGCAGTACATCCTCGTCGCTGTCGTTGGAACCCTCGCGGCGACCGTCATTGTGATCGGCATCTCCGCGCTGCTGAGCCCCGGGGAGATCGACTTCTCCGTCACCAAGGCCTCGCGCATGATCCTGCCTCTGGATGGAGGTGTGGAGCTGAACCTCACAGTCGCCGCCGCCAACCCCGGGTGGCGCGCCGCCGTGGAGTACCGCGGGTTCGACGTGAAGCTGCATTACACGCCGTTCGACGGCGAGCCCACGCTGCTCAACGAAGACGACGCCTCGTCGGTGCGGACGCCGTTCGTGCAGCCGCCGCGGAACACGACGGCCATCCCGGTGCGGGTGTTCGTCAGCGGCGACTAC-TGGGT-CCAAAACATGATGAGAGGCAAC-GACATCCCGATCACCGCGCA-GGTGACGGCCACCGTCCGATTCCTCATCGGGAAGGCCTGCACCAGGTCCTACCACATC-GCCGTCTCCAGCTACCTCGGCCTCGACTTGTTCAAACGCCCTACCGTATCATTCAATCATAATAATACAGCCGA-TTGCGTCGCAGCTGGGCCGGAAACAGTCTAGCGATTGCTATTACCTGCTGCTCTGCTGCCTGCAATTCTACTAGTGTCTCTTTAATTATTTATCTGCTGCTCTCTCTGTCTATTAATTAATTATGCATGTAAAATCCTCCATCAAAACAAATGTAAGGTATATTTTATTTTCTGATTTTTCTAAATGAGATGGATATATTTGTAGTCTCTCTATGTACTAAACTAAATTATTGATCAGAGTAAAATCAAAGCGTGTTTTGATTAAAAAAAAAA]

[+] EMBL AK067782             [CACGTAGGTAGCTAGATAATTAAGCAGGCATGGCAGCAATGGCGGCGGCGGCGACGACGACGACGAAGAAGCTGCAGGTGGCTTCATCATCACCAAACACACACAAATCATATTGGAGCACGAAGCAGTACATCCTCGTCGCTGTCGTTGGAACCCTCGCGGCGACCGTCATTGTGATCGGCATCTCCGCGCTGCTGAGCCCCGGGGAGATCGACTTCTCCGTCACCAAGGCCTCGCGCATGATCCTGCCTCTGGATGGAGGTGTGGAGCTGAACCTCACAGTCGCCGCCGCCAACCCCGGGTGGCGCGCCGCCGTGGAGTACCGCGGGTTCGACGTGAAGCTGCATTACACGCCGTTCGACGGCGAGCCCACGCTGCTCAACGAAGACGACGCCTCGTCGGTGCGGACGCCGTTCGTGCAGCCGCCGCGGAACACGACGGCCATCCCGGTGCGGGTGTTCGTCAGCGGCGACTAC TGGGT CCAAAACATGATGAGAGGCAAC GACATCCCGATCACCGCGCA GGTGACGGCCACCGTCCGATTCCTCATCGGGAAGGCCTGCACCAGGTCCTACCACATC GCCGTCTCCAGCTACCTCGGCCTCGACTTGTTCAAACGCCCTACCGTATCATTCAATCATAATAATACAGCCGA TTGCGTCGCAGCTGGGCCGGAAACAGTCTAGCGATTGCTATTACCTGCTGCTCTGCTGCCTGCAATTCTACTAGTGTCTCTTTAATTATTTATCTGCTGCTCTCTCTGTCTATTAATTAATTATGCATGTAAAATCCTCCATCAAAACAAATGTAAGGTATATTTTATTTTCTGATTTTTCTAAATGAGATGGATATATTTGTAGTCTCTCTATGTACTAAACTAAATTATTGATCAGAGTAAAATCAAAGCG                    ]
[+] EMBL BM418617             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                            tGTCAGCGGCGACTACTTGGGTCCCGAGACATGATGAGA GCGACGGACATCCCGATCCCCGCGCATGGTGACGGCCCCCGTCCGATTCCTCATCGGGAAGGCCTGCACCAGGTCCTACCACATCGGCCGTCTCCTGCTACCTCGGCCTCGACTTGTTC AACGCCCTACCGTATCATTCAATCATAATAATACAGCCGAGTTGCGTCGCAGCTGGGCCGGAAACAGTCTAGCGATTGCTATTACCTGCTGCTCTGCTGCCTGCAATTCTACTAGTGTCTCTTTAATTATTTATCTGCTGCTCTCTCTGTCTATTAATTAATTATGCATGTAAAATCCTCCATC AAACCAATGTAAGGTATATTTTATTTTCTGATTTTTCTAAATGAGATGGATATATTTGTAGTCTCTCTATGTACTAAACTAAATTATTGATCAGTGTAAAATC AAGCGTGTTTTGATTAAAAAAAAAA]




>consensus_1539#0
CACGTAGGTAGCTAGATAATTAAGCAGGCATGGCAGCAATGGCGGCGGCGGCGACGACGA
CGACGAAGAAGCTGCAGGTGGCTTCATCATCACCAAACACACACAAATCATATTGGAGCA
CGAAGCAGTACATCCTCGTCGCTGTCGTTGGAACCCTCGCGGCGACCGTCATTGTGATCG
GCATCTCCGCGCTGCTGAGCCCCGGGGAGATCGACTTCTCCGTCACCAAGGCCTCGCGCA
TGATCCTGCCTCTGGATGGAGGTGTGGAGCTGAACCTCACAGTCGCCGCCGCCAACCCCG
GGTGGCGCGCCGCCGTGGAGTACCGCGGGTTCGACGTGAAGCTGCATTACACGCCGTTCG
ACGGCGAGCCCACGCTGCTCAACGAAGACGACGCCTCGTCGGTGCGGACGCCGTTCGTGC
AGCCGCCGCGGAACACGACGGCCATCCCGGTGCGGGTGTTCGTCAGCGGCGACTACTGGG
TCCAAAACATGATGAGAGGCAACGACATCCCGATCACCGCGCAGGTGACGGCCACCGTCC
GATTCCTCATCGGGAAGGCCTGCACCAGGTCCTACCACATCGCCGTCTCCAGCTACCTCG
GCCTCGACTTGTTCAAACGCCCTACCGTATCATTCAATCATAATAATACAGCCGATTGCG
TCGCAGCTGGGCCGGAAACAGTCTAGCGATTGCTATTACCTGCTGCTCTGCTGCCTGCAA
TTCTACTAGTGTCTCTTTAATTATTTATCTGCTGCTCTCTCTGTCTATTAATTAATTATG
CATGTAAAATCCTCCATCAAAACAAATGTAAGGTATATTTTATTTTCTGATTTTTCTAAA
TGAGATGGATATATTTGTAGTCTCTCTATGTACTAAACTAAATTATTGATCAGAGTAAAA
TCAAAGCGTGTTTTGATTAAAAAAAAAA

clustalw multiple alignements is not computed in this case