These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15393#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 1438 fasta sequence [CCTCCGCAAGAAAGAAAGAAAAAGAGGGGAAGCAAAGCGCAGAGGCGGCCGTCGCAGCCGCAACACAAGTCAGGGGAGGAGAGAGAGGCCGCGCCGCCGCAGATCTGTGGCCGCGTTAGGGTTTCTTCGCCGGAATCGAGCGAGGAAGTAGGAGGGAGAGGAGGAGGAGGAGGAGGGCGACGAGTAGGAGGCGGCGGCGGCGGAGATGGACGTG-GTGAAGGCGGCGCAGCTCT-CGGGGCGGACGCTGGAGAAGGTGGTGGTGCACCCGCTGGTGCTGCTCAGCATCGTCGACCACTACAACCGCGTCGCCCGCGACACCCGC-AAGCGCGTCGTCGGCGTGCTCCTCGGCACCTCCTCCCGCGGCTCCGTCGATGTCACCAACTCCTACGCCGTGCCGTTTGAAGAGGATGACAAGGATCCGAGGATCTGGTTCCTCGATCATAATTACCACGAATCGATGTTTTCCATGTTCAAGAGGATCAACGCCAAGGAGCATGTTGTTGGCTGGTACAGCACCGGTCCAAAACTCAGGGAGAACGACTTGGATATACACGCACTATTCAATAACTATGTTCCTAACCCTGTCCTGGTGATTATTGATGTTCAACCCAAGGAGTTAGGAATACCCACCAAAGCATACTATGCTGTGGAGGAGGTTAAAGAGAATGCTACTC-AAAAAAGTCAAAAGGTGTTTGTTCATGTTCCTTCAGAAATAGCTGCCCACGAGGTTGAGGAAATCGGAGTTGAGCATCTTCTGAGGGATGTCAAGGACACAACAATAAGCACGCTTGCGACAGAGGTAACCAGCAAGCTTGCAGCCTTGAAAGGACTGGACGCAAGGCTCAGGGAGATCCGTGGGTACTTAGATCTTGTAATTGAAGGGAAGCTCCCACTGAATCATGAGATTTTGTACCACTTGCAGGATGTGTTTAATCTGCTCCCCAATCTCAATGTAAACGAGCTTATTAAAGCCTTTGCAGTTAAAACAAACGATATGATGTTGGTCATATACTTGTCTTCTCTTATCCGGAGTGTCATCGCACTCCATAACTTGATCAATAACAAGATGCTAAACAAGGAGCATGAGAAAGCCGAGGATTCGAAGCCAACCGCCATACCTAGTGCTGCTGGGAGCTGAATGTGCTTTATTTGCCTTAGATTTTGGACCCAGTGGAAGCCAAAAGAATTGTGACATGTTAGCATGATGGCGTTTGAACCAATTGTCTTTGACCTTGGTTTTACACTTTCGATGTTTATTTCATGTACGATAAGGTCAACGGCAAACTTTACATTCTGTGAGCTTAGGTCATACTACCTCTTGAGCTTTCATCTTGATCTTATATACAATGTTTCATGGGGTGCATCATGTTTTGTGATGC-GGATTGTCGTACGATTAACTTCTAGTAAATGTTTACTTGACGCAAAAAAAAAAAAAAAA] [+] EMBL AK103551 [CCTCCGCAAGAAAGAAAGAAAAAGAGGGGAAGCAAAGCGCAGAGGCGGCCGTCGCAGCAGCAACACAAGTCAGGGGAGGAGAGAGAGGCCGCGCCGCCGCAGATCTGTGGCCGCGTTAGGGTTTCTTCGCCGGAATCGAGCGAGGAAGTAGGAGGGAGAGGAGGAGGAGGAGGAGGGCGACGAGTAGGAGGCGGCGGCGGCGGAGATGGACGTG GTGAAGGCGGCGCAGCTCT CGGGGCGGACGCTGGAGAAGGTGGTGGTGCACCCGCTGGTGCTGCTCAGCATCGTCGACCACTACAACCGCGTCGCCCGCGACACCCGC AAGCGCGTCGTCGGCGTGCTCCTCGGCACCTCCTCCCGCGGTTCCGTCGATGTCACCAACTCCTACGCCGTGCCGTTTGAAGAGGATGACAAGGATCCGAGGATCTGGTTCCTCGATCATAATTACCACGAATCGATGTTTTCCATGTTCAAGAGGATCAACGCCAAGGAGCATGTTGTTGGCTGGTACAGCACCGGTCCAAAACTCAGGGAGAACGACTTGGATATACACGCACTATTCAATAACTATGTTCCTAACCCTGTCCTGGTGATTATTGATGTTCAACCCAAGGAGTTAGGAATACCCACCAAAGCATACTATGCTGCGGAGGAGGTTAAAGAGAATGCTACTC AAAAAAGTCAAAAGGTGTTTGTTCATGTTCCTTCAGAAATAGCTGCCCACGAGGTTGAGGAAATCGGAGTTGAGCATCTTCTGAGGGATGTCAAGGACACAACAATAAGCACGCTTGCGACAGAGGTAACCAGCAAGCTTGCAGCCTTGAAAGGACTGGACGCAAGGCTCAGGGAGATCCGTGGGTACTTAGATCTTGTAATTGAAGGGAAGCTCCCACTGAATCATGAGATTTTGTACCACTTGCAGGATGTGTTTAATCTGCTCCCCAATCTCAATGTAAACGAGCTTATTAAAGCCTTTGCAGTTAAAACAAACGATATGATGTTGGTCATATACTTGTCTTCTCTTATCCGGAGTGTCATCGCACTCCATAACTTGATCAATAACAAGATGCTAAACAAGGAGCATGAGAAAGCCGAGGATTCGAAGCCAACCGCCATACCTAGTGCTGCTGGGAGCTGAATGTGCTTTATTTGCCTTAGATTTTGGACCCAGTGGAAGCCAAAAGAATTGTGACATGTTAGCATGATGGCGTTTGAACCAATTGTCTTTGACCTTGGTTTTACACTTTCGATGTTTATTTCATGTACGATAAGGTCAACGGCAAACTTTACATTCTGTGAGCTTAGGTCATACTACCTCTTGAGCTTTCATCTTGATCTTATATACAATGTTTCATGGGGTGCATCATGTTTTGTGATGC GGATTGTCGTACGATTAACTTCTAGTAAATGTT ] [+] EMBL CB624296 [ AAAGACGGGAAGCAAAGCGCAGAGGCGGCCGTCGCAGCCGCAACACAAGGCAGGGGAGGAGAGAGAGGCCGCGCCGCCGCAGATCTGTGGCCGCGTTAGGTTTTCTTCGCCGGAATCGAGCGAGGAAGTAGGAGGGAGAGGAGGAGGAGGAGGAGGGCGACGAGTAGGAGGCGGCGGCGGCGGAGATGGACGTG GTGAAGGCGGCGCAGCTCT CGGGGCGGACGCTGGAGAAGGTGGTGGTGCACCCGCTGGTGCTGCTCAGCATCGTCGACCACTACAACCGCGTCGCCCGCGACACCCGC AAGCGCGTCGTCGGCGTGCTCCTCGGCACCTCCTCCCGCGGCTCCGTCGATGTCACCAACTCCTACGCCGTGCCGTTTGAAGAGGATGACAAGGATCCGAGGATCTGGTTCCTCGATCATAATTACCACGAATCGATGTTTTCCATGTTCAAGAGGATCAACGCCAAGGAGCATGTTGTTGGCTGGTACAGCACCGGTCCAAAACTCAGGGAGAACGACTTGGATATACACGCACTATTCAATAACTATGTTCCTAACCCTGTCCTGGTGATTATTGATGTTCAACCCAAGGAGTTAGGAATACCCACCAAAGCATACTATGCTGTGGAGGAGGTTAAAGAGAATGCTACTC AAAAAAGTCAAAAGGTGTTTGTTCATGTTCCTTCAGAAATAGCTGCCCACGAGGTTGAGGAAATCGGAGTTGAGCATCTTCTGAGGGATGTCAAGGACACAACAATAAG ] [+] EMBL CB624259 [ GCGGCCGNCGCAGCCGCAACACAAGGCAGGGGAGGAGAGAGAGGCCGCGCCGCCGCAGATCTGTGGCCGCGTTAGGTTTTCTTCGCCGGAATCGAGCGAGGAAGTAGGAGGGAGAGGAGGAGGAGGAGGAGGGCGACGAGTAGGAGGCGGCGGCGGCGGAGATGGACGTG GTGAAGGCGGCGCAGCTCT CGGGGCGGACGCTGGAGAAGGTGGTGGTGCACCCGCTGGTGCTGCTCAGCATCGTCGACCACTACAACCGCGTCGCCCGCGACACCCGC AAGCGCGTCGTCGGCGTGCTCCTCGGCACCTCCTCCCGCGGCTCCGTCGATGTCACCAACTCCTACGCCGTGCCGTTTGAAGAGGATGACAAGGATCCGAGGATCTGGTTCCTCGATCATAATTACCACGAATCGATGTTTTCCATGTTCAAGAGGATCAACGCCAAGGAGCATGTTGTTGGCTGGTACAGCACCGGTCCAAAACTCAGGGAGAACGACTTGGATATACACGCACTATTCAATAACTATGTTCCTAACCCTGTCCTGGTGATTATTGATGTTCAACCCAAGGAGTTAGGAATACCCACCAAAGCATACTATGCTGTGGAGGAGGTTAAAGAGAATGCTACTC AAAAAAGTCAAAAGGTGTTTGTTCATGTTCCTTCAGAAATAGCTGCCCACGAGGTTGAGGAAATCGGAGTTGAGCATCTTCTGAGGGATGTCAAGGACACAACAATAAGC ] [+] EMBL AK061835 [ GCAACACAAGTCAGGGGAGGAGAGAGAGGCCGCGCCGCCGCAGATCTGTGGCCGCGTTAGGGTTTCTTCGCCGGAATCGAGCGAGGAAGTAGGAGGGAGAGGAGGAGGAGGAGGAGGGCGACGAGTAGGAGGCGGCGGCGGCGGAGATGGACGTG GTGAAGGCGGCGCAGCTCT CGGGGCGGACGCTGGAGAAGGTGGTGGTGCACCCGCTGGTGCTGCTCAGCATCGTCGACCACTACAACCGCGTCGCCCGCGACACCCGC AAGCGCGTCGTCGGCGTGCTCCTCGGCACCTCCTCCCGCGGTTCCGTCGATGTCACCAACTCCTACGCCGTGCCGTTTGAAGAGGATGACAAGGATCCGAGGATCTGGTTCCTCGATCATAATTACCACGAATCGATGTTTTCCATGTTCAAGAGGATCAACGCCAAGGAGCATGTTGTTGGCTGGTACAGCACCGGTCCAAAACTCAGGGAGAACGACTTGGATATACACGCACTATTCAATAACTATGTTCCTAACCCTGTCCTGGTGATTATTGATGTTCAACCCAAGGAGTTAGGAATACCCACCAAAGCATACTATGCTGTGGAGGAGGTTAAAGAGAATGCTACTCAAAAAAAGTCAAAAGGTGTTTGTTCATGTTCCTTCAGAAATAGCTGCCCACGAGGTTGAGGAAATCGGAGTTGAGCATCTTCTGAGGGATGTCAAGGACACAACAATAAGCACGCTTGCGACAGAGGTAACCAGCAAGCTTGCAGCCTTGAAAGGACTGGACGCAAGGCTCAGGGAGATCCGTGGGTACTTAGATCTTGTAATTGAAGGGAAGCTCCCACTGAATCATGAGATTTTGTACCACTTGCAGGATGTGTTTAATCTGCTCCCCAATCTCAATGTAAACGAGCTTATTAAAGCCTTTGCAGTTAAAACAAACGATATGATGTTGGTCATATACTTGTCTTCTCTTATCCGGAGTGTCATCGCACTCCATAACTTGATCAATAACAAGATGCTAAACAAGGAGCATGAGAAAGCCGAGGATTCGAAGCCAACCGCCATACCTAGTGCTGCTGGGAGCTGAATGTGCTTTATTTGCCTTAGATTTTGGACCCAGTGGAAGCCAAAAGAATTGTGACATGTTAGCATGATGGCGTTTGAACCAATTGTCTTTGACCTTGGTTTTACACTTTCGATGTTTATTTCATGTACGATAAGGTCAACGGCAAACTTTACATTCTGTGAGCTTAGGTCATACTACCTCTTGAGCTTTCATCTTGATCTTATATACAATGTTTCATGGGGTGCATCATGTTTTGTGATGC GGATTGTCGTACGATTAACTTCTAGTAAATGTT ] [+] EMBL CB624219 [ ACACAAGGCAGGGGAGGAGAGAGAGGCCGCGCCGCCGCAGATCTGAGGCCGCGANAGGCTTTCTTCGCCGGAATCGAGCGAGGAAGTAGGAGGGAGAGGAGGAGGAGGAGGAGGGCGACGAGTAGGAGGCGGCGGCGGCGGAGATGGACGTG GTGAAGGCGGCGCAGCTCT CGGGGCGGACGCTGGAGAAGGTGGTGGTGCACCCGCTGGTGCTGCTCAGCATCGTCGACCACTACAACCGCGTCGCCCGCGACACCCGC AAGCGCGTCGTCGGCGTGCTCCTCGGCACCTCCTCCCGCGGCTCCGTCGATGTCACCAACTCCTACGCCGTGCCGTTTGAAGAGGATGACAAGGATCCGAGGATCTGGTTCCTCGATCATAATTACCACGAATCGATGTTTTCCATGTTCAAGAGGATCAACGCCAAGGAGCATGTTGTTGGCTGGTACAGCACCGGTCCAAAACTCAGGGAGAACGACTTGGATATACACGCACTATTCAATAACTATGTTCCTAACCCTGTCCTGGTGATTATTGATGTTCAACCCAAGGAGTTAGGAATACCCACCAAAGCATACTATGCTGTGGAGGAGGTTAAAGAGAATGCTACTC AAAAAAGTCAAAAGGTGTTTGTTCATGTTCCTTCAGAAATAGCTGCCCACGAGGTTGAGGAAATCGGAGTTGAGCATCTTCTGAGGGATGTCAAGGACACAACAATAAG ] [+] EMBL CB624217 [ CACAAGGCAGGGGAGGAGAGAGAGGCCGCGCCGCCGCAGATCTGAGGCCGCGATAGGATTTCTTCGCCGGAATCGAGCGAGGAAGTAGGAGGGAGAGGAGGAGGAGGAGGAGGGCGACGAGTAGGAGGCGGCGGCGGCGGAGATGGACGTG GTGAAGGCGGCGCAGCTCT CGGGGCGGACGCTGGAGAAGGTGGTGGTGCACCCGCTGGTGCTGCTCAGCATCGTCGACCACTACAACCGCGTCGCCCGCGACACCCGC AAGCGCGTCGTCGGCGTGCTCCTCGGCACCTCCTCCCGCGGCTCCGTCGATGTCACCAACTCCTACGCCGTGCCGTTTGAAGAGGATGACAAGGATCCGAGGATCTGGTTCCTCGATCATAATTACCACGAATCGATGTTTTCCATGTTCAAGAGGATCAACGCCAAGGAGCATGTTGTTGGCTGGTACAGCACCGGTCCAAAACTCAGGGAGAACGACTTGGATATACACGCACTATTCAATAACTATGTTCCTAACCCTGTCCTGGTGATTATTGATGTTCAACCCAAGGAGTTAGGAATACCCACCAAAGCATACTATGCTGTGGAGGAGGTTAAAGAGAATGCTACTC AAAAAAGTCAAAAGGTGTTTGTTCATGTTCCTTCANAAATAGCTGCCCACGAGGTTGAGGAAATCGGAGTTGAGCATCTTCTGAGGGATGTCAAGGACACAACAATAA ] [+] EMBL OSR27841A [ GTCAGGGGAGGAGAGAGAGGCCGNGNCGCCGCAGATCTGTGGCCGCGTTAGGGTTTCTTCGCCGGAATCGAGCGAGGAAGTAGGAGGGAGAGGAGGAGGAGNAGGAGGGCGACGAGTAGGAGGCGGCGGNGGCGGAGATGGACGTA GTGAAGGCGGCGCA NTCTACGGGGCGGACGCTGGAGAAGGTGGTGGTGCACCCACTGGTGCTGCTCAGCATCGTCGACCACTACAACCGCGTCGCCCGNGACACCCGCAAAGCGCG ] [+] EMBL OSR27861A [ GTCAGGGGAGGAGAGAGAGGCCGCGCCGCCGCAGATCTNTGGCCGCGTTAGGGTTTCTTNGCCGGAATCGAGCGAGGAAGTAGGAGGGAGAGGAGGAGGAGGAGGAGGGCGACGAGTAGGAGGCGGCGGCGGCGGAGATGGACGTG GTGAAGGCGNCGCA NTCT CGGGGCGGACGCTNGAGAAGGTGGTGGTGCACCCGCTGGTGCTGCTCAGCATCGTCGACCACTACAACCGCGTCACCCGCGACACCCGN AANCNCGTCNTCGGCGTNCTCCTC ] [+] EMBL AK104076 [ GGGAGGAGAGAGAGGCCGCGCCGCCGCAGATCTGTGGCCGCGTTAGGGTTTCTTCGCCGGAATCGAGCGAGGAAGTAGGAGGGAGAGGAGGAGGAGGAGGAGGGCGACGAGTAGGAGGCGGCGGCGGCGGAGATGGACGTG GTGAAGGCGGCGCAGCTCT CGGGGCGGACGCTGGAGAAGGTGGTGGTGCACCCGCTGGTGCTGCTCAGCATCGTCGACCACTACAACCGCGTCGCCCGCGACACCCGC AAGCGCGTCGTCGGCGTGCTCCTCGGCACCTCCTCCCGCGGTTCCGTCGATGTCACCAACTCCTACGCCGTGCCGTTTGAAGAGGATGACAAGGATCCGAGGATCTGGTTCCTCGATCATAATTACCACGAATCGATGTTTTCCATGTTCAAGAGGATCAACGCCAAGGAGCATGTTGTTGGCTGGTACAGCACCGGTCCAAAACTCAGGGAGAACGACTTGGATATACACGCACTATTCAATAACTATGTTCCTAACCCTGTCCTGGTGATTATTGATGTTCAACCCAAGGAGTTAGGAATACCCACCAAAGCATACTATGCTGTGGAGGAGGTTAAAGAGAATGCTACTC AAAAAAGTCAAAAGGTGTTTGTTCATGTTCCTTCAGAAATAGCTGCCCACGAGGTTGAGGAAATCGGAGTTGAGCATCTTCTGAGGGATGTCAAGGACACAACAATAAGCACGCTTGCGACAGAGGTAACCAGCAAGCTTGCAGCCTTGAAAGGACTGGACGCAAGGCTCAGGGAGATCCGTGGGTACTTAGATCTTGTAATTGAAGGGAAGCTCCCACTGAATCATGAGATTTTGTACCACTTGCAGGATGTGTTTAATCTGCTCCCCAATCTCAATGTAAACGAGCTTATTAAAGCCTTTGCAGTTAAAACAAACGATATGATGTTGGTCATATACTTGTCTTCTCTTATCCGGAGTGTCATCGCACTCCATAACTTGATCAATAACAAGATGCTAAACAAGGAGCATGAGAAAGCCGAGGATTCGAAGCCAACCGCCATACCTAGTGCTGCTGGGAGCTGAATGTGCTTTATTTGCCTTAGATTTTGGACCCAGTGGAAGCCAAAAGAATTGTGACATGTTAGCATGATGGCGTTTGAACCAATTGTCTTTGACCTTGGTTTTACACTTTCGATGTTTATTTCATGTACGATAAGGTCAACGGCAAACTTTACATTCTGTGAGCTTAGGTCATACTACCTCTTGAGCTTTCATCTTGATCTTATATACAATGTTTCATGGGGTGCATCATGTTTTGTGATGC ] [+] EMBL CB680814 [ CCGCCGCAGATCTGTGGCCGCGTTATGGTTTCTTCGCCGGAATCGAGCGATGAAGTAGGAGGGAGAGGAGGAGGAGGAGGAGGGCGACGAGTACGAGGCGGCGGCGGCGGAGATGGACGTGAGTGAAGGCGTCGCAGCTCT CGGGGCGGACGCTGGAGAAGGTGGTGGTGCACCCGCTGGTGCTGCTCACCATCGTCTACCACTACAACCGCGTCGCCCGCGACACCCGC AAGCGCGTCGTCGGCGTGCTCCTCGGCACCTCCTCCCGCGGCTCCGTCTATGTCACCAACTCCTACGCCGTGCCGTTTGAAGAGGATGACAAGGATCCGAGGATCTGGTTCCTCCATCATAATTACCACGAATCTATGTTTTCCATGTTCAAGAGGATCAACGCCTAGGAGCATGTTGTTGGCTGGTACAGCTCCGGTCCGAAACTCAGGGAGAACGACTTGGATATACACGCACTATTCAATAACTATGTTCCTAACCCTGTCCTGGTGATTATTGATGTTCAACCCAAGGAGTTACGAATACCCACCAAAGCATACTATGCTGTGGAGGAGGTTAAAGAGAATGCTACTC AAAAAAGTCAAAAGGTGTTTGTTCATGTTCCTTCACAAATAGCTGCC ] [+] EMBL CA757368 [ GACGCTGGAGAAGGTGGTGGTGCACCCGCTGGTGCTGCTCAGCATCGTCGACCACTACAACCGCGTCGCCCGCGACACCCGC AAGCGCGTCGTCGGCGTGCTCCTCGGCACCTCCTCCCGCGGCTCCGTCGATGTCACCAACTCCTACGCCGTGCCGTTTGAAGAGGATGACAAGGATCCGAGGATCTGGTTCCTCGATCATAATTACCACGAATCGATGTTTTCCATGTTCAAGA ] [-] EMBL CB624297 [ AGTTAGGAATACCCACCAAAGCATACTATGCTGTGGAGGAGGTTAAAGAGAATGCTACTC AAAAAAGTCAAAAGGTGTTTGTTCATGTTCCTTCAGAAATAGCTGCCCACGAGGTTGAGGAAATCGGAGTTGAGCATCTTCTGAGGGATGTCAAGGACACAACAATAAGCACGCTTGCGACAGAGGTAACCAGCAAGCTTGCAGCCTTGAAAGGACTGGACGCAAGGCTCAGGGAGATCCGTGGGTACTTAGATCTTGTAATTGAAGGGAAGCTCCCACTGAATCATGAGATTTTGTACCACTTGCAGGATGTGTTTAATCTGCTCCCCAATCTCAATGTAAACGAGCTTATTAAAGCCTTTGCAGTTAAAACAAACGATATGATGTTGGTCATATACTTGTCTTCTCTTATCCGGAGTGTCATCGCACTCCATAACTTGATCAATAACAAGATGCTAAACAAGGAGCATGAGAAAGCCGAGGATTCGAAGCCAACCGCCATACCTAGTGCTGCTGGGAGCTGAATGTGCTTTATTTGCCTTAGATTTTGGACCCAGTGGAAGCCAAAAGAATTGTGACATGTTAGCATGATGGCGTTTGAACCAATTGTCTTTGACCTTGGTTTTACACTTTCGATGTTTATTTCATGTACGATAAGGTCAACGGCAAACTTTACATTCTGTGAGCTTAGGTCATACTACCTCTTGAGCTTTCATCTTGATCTTATATACAATGTTTCATGGGGTGCATCATGTTTTGTGATGC GGATTGTCGTACGATTAACTTCTAGTAAATGTTT ] [-] EMBL CB624220 [ GAATACCCACCAAAGCATACTATGCTGTGGAGGAGGTTAAAGAGAATGCTACTC AAAAAAGTCAAAAGGTGTTTGTTCATGTTCCTTCAGAAATAGCTGCCCACGAGGTTGAGGAAATCGGAGTTGAGCATCTTCTGAGGGATGTCAAGGACACAACAATAAGCACGCTTGCGACAGAGGTAACCAGCAAGCTTGCAGCCTTGAAAGGACTGGACGCAAGGCTCAGGGAGATCCGTGGGTACTTAGATCTTGTAATTGAAGGGAAGCTCCCACTGAATCATGAGATTTTGTACCACTTGCAGGATGTGTTTAATCTGCTCCCCAATCTCAATGTAAACGAGCTTATTAAAGCCTTTGCAGTTAAAACAAACGATATGATGTTGGTCATATACTTGTCTTCTCTTATCCGGAGTGTCATCGCACTCCATAACTTGATCAATAACAAGATGCTAAACAAGGAGCATGAGAAAGCCGAGGATTCGAAGCCAACCGCCATACCTAGTGCTGCTGGGAGCTGAATGTGCTTTATTTGCCTTAGATTTTGGACCCAGTGGAAGCCAAAAGAATTGTGACATGTTAGCATGATGGCGTTTGAACCAATTGTCTTTGACCTTGGTTTTACACTTTCGATGTTTATTTCATGTACGATAAGGTCAACGGCAAACTTTACATTCTGTGAGCTTAGGTCATACTACCTCTTGAGCTTTCATCTTGATCTTATATACAATGTTTCATGGGGTGCATCATGTTTTGTGATGC GGATTGTCATGCGATTAACTTCTAGTAAATGTTTACTTGACGC ] [-] EMBL CB624260 [ GAGAATGCTACTC AAAAAAGTCAAAAGGTGTTTGTTCATGTTCCTTCAGAAATAGCTGCCCACGAGGTTGAGGAAATCGGAGTTGAGCATCTTCTGAGGGATGTCAAGGACACAACAATAAGCACGCTTGCGACAGAGGTAACCAGCAAGCTTGCAGCCTTGAAAGGACTGGACGCAAGGCTCAGGGAGATCCGTGGGTACTTAGATCTTGTAATTGAAGGGAAGCTCCCACTGAATCATGAGATTTTGTACCACTTGCAGGATGTGTTTAATCTGCTCCCCAATCTCAATGTAAACGAGCTTATTAAAGCCTTTGCAGTTAAAACAAACGATATGATGTTGGTCATATACTTGTCTTCTCTTATCCGGAGTGTCATCGCACTCCATAACTTGATCAATAACAAGATGCTAAACAAGGAGCATGAGAAAGCCGAGGATTCGAAGCCAACCGCCATACCTAGTGCTGCTGGGAGCTGAATGTGCTTTATTTGCCTTAGATTTTGGACCCAGTGGAAGCCAAAAGAATTGTGACATGTTAGCATGATGGCGTTTGAACCAATTGTCTTTGACCTTGGTTTTACACTTTCGATGTTTATTTCATGTACGATAAGGTCAACGGCAAACTTTACATTCTGTGAGCTTAGGTCATACTACCTCTTGAGCTTTCATCTTGATCTTATATACAATGTTTCATGGGGTGCATCATGTTTTGTGATGC GGATTGTCGTGCGATTAACTTCTAGTAAATGTTTACTTGACGC ] [-] EMBL CB624218 [ AGAATGCTACTC AAAAAAGTCAAAAGGTGTTTGTTCATGTTCCTTCAGAAATAGCTGCCCACGAGGTTGAGGAAATCGGAGTTGAGCATCTTCTGAGGGATGTCAAGGACACAACAATAAGCACGCTTGCGACAGAGGTAACCAGCAAGCTTGCAGCCTTGAAAGGACTGGACGCAAGGCTCAGGGAGATCCGTGGGTACTTAGATCTTGTAATTGAAGGGAAGCTCCCACTGAATCATGAGATTTTGTACCACTTGCAGGATGTGTTTAATCTGCTCCCCAATCTCAATGTAAACGAGCTTATTAAAGCCTTTGCAGTTAAAACAAACGATATGATGTTGGTCATATACTTGTCTTCTCTTATCCGGAGTGTCATCGCACTCCATAACTTGATCAATAACAAGATGCTAAACAAGGAGCATGAGAAAGCCGAGGATTCGAAGCCAACCGCCATACCTAGTGCTGCTGGGAGCTGAATGTGCTTTATTTGCCTTAGATTTTGGACCCAGTGGAAGCCAAAAGAATTGTGACATGTTAGCATGATGGCGTTTGAACCAATTGTCTTTGACCTTGGTTTTACACTTTCGATGTTTATTTCATGTACGATAAGGTCAACGGCAAACTTTACATTCTGTGAGCTTAGGTCATACTACCTCTTGAGCTTTCATCTTGATCTTATATACAATGTTTCATGGGGTGCATCATGTTTTGTGATGC GGATTGTCGTACGATTAACTTCTAGTAAATGTTTACTTGACGC ] [+] EMBL C28347 [ ATGTTGGTCATATACTTGTNTTCTCTTATCCGGAGTGTCATCGCACTCCATAACTTGATCAATAACAAGATGCTAAACAAGGAGCATGAGAAAGCCGAGGATTCGAAGCCAACCGCCATACCTAGTGCTGCTGGGAGCTGAATGTGCTTTATTTGCCTTAGATTTTGGACCCAGTGGAAGCCAAAAGAATTGTGACATGTTAGCATGATGGCGTTTGAACCAATTGTCTTTGACCTTGGTTTTACACTTTCGATGTTTATTTCATGTACGATAAGGTCAACGGCAAACTTTACATTCTGTGAGCTTAGGTCATACTACCTCTTGAGCTTTCATCTTGATCTTATATACAATGTTTCATGGGGTGCATCATGTTTTGTGATGC GGATTGTCGNACGA TAACCTCTAGT AATGGTTACTTGACGNAAAA ] [+] EMBL AU173397 [ anACTTGTCTTCTCTTATCCGGAGTGTCATCGCACTCCATAACTTGATCAATAACAAGATGCTAAACAAGGAGCATGAGAAAGCCGAGGATTTNAAGCCAACCGCCATACCTAGTGCTGCTGGGAGCTGAATGTGCTTTATTTGCCTTAGATTTTGGACCCAGTGGAAGCCAAAAGAATTGTGACATGTTAGCATGATGGCGTTTGAACCAATTGTCTTTGACCTTGGTTTTACACTTTCGATGTTTATTTCATGTACGATAAGGTCAACGGCAAACTTTACATTCTGTGAGCTTAGGTCATACTACCTCTTGAGCTTTCATCTTGATCTTATATACAATGTTTCATGGGGTGCATCATGTTTTGTGATGCGGGATTGTCGTACGATTAACTTTTAGTAAATGTTTACTTGACGCCGAAAAAAAAAAAAAA] consensusID : consensus_15393#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1333 fasta sequence [CCGCGCCGCCGCAGATCTGTGGCCGCGTTAGGGTTTCTTCGCCGGAATCGAGCGAGGAAGTAGGAGGGAGAGGAGGAGGAGGAGGAGGGCGACGAGTAGGAGGCGGCGGCGGCGGAGATGGACGTGGTGAAGGCGGCGCA-NTCTCGGGGCGGACGCTGGAGAAGGTGGTGGTGCACCCGCTGGTGC-TGCTCAGCATCGTCGACCACTACAACCGCGTCGCCCGCNACACCCGCAAGCGCGTCGTCGGCGTGCTCCTCGGCACCTCCTCCCGCGGTTCCGTCGATGTCACCAACTCCTACGNCGTGCCGTTTGAAGAGGATGACAAGGATCCGAGGATCTTGGTTCCTCGATCATAATTACCACGAATCGATGTTTTCCATGTTCAAGAGGATCAACGCCAAGGAGCATGTTGTTGGCTGGTACAGCACCGGTCCAAAACTCAGGGAGAACGACTTGGATATACACGCACTATTCAATAACTATGTTCCTAACCCTGTCCTGGTGATTATTGATGTTCAACCCAAGGAGTTAGGAATACCCACCAAAGCATACTATGCTGTGGAGGAGGTTAAAGAGAATGCTACTCAAAAAAGTCAAAAGGTGTTTGTTCATGTTCCTTCAGAAATAGCTGCCCACGAGGTTGAGGAAATCGGAGTTGAGCATCTTCTGAGGGATGTCAAGGACACAACAATAAGCACGCTTGCGACAGAGGTAACCAGCAAGCTTGCAGCCTTGAAAGGACTGGACGCAAGGCTCAGGGAGATCCGTGGGTACTTAGATCTTGTAATTGAAGGGAAGCTCCCACTGAATCATGAGATTTTGTACCACTTGCAGGATGTGTTTAATCTGCTCCCCAATCTCAATGTAAACGAGCTTATTAAAGCCTTTGCAGTTAAAACAAACGATATGATGTTGGTCATATACTTGTCTTCTCTTATCCGGAGTGTCATCGCACTCCATAACTTGATCAATAACAAGATGCTAAACAAGGAGCATGAGAAAGCCGAGGATTCGAAGCCAACCGCCATACCTAGTGCTGCTGGGAGCTGAATGTGCTTTATTTGCCTTAGATTTTGGACCCAGTGGAAGCCAAAAGAATTGTGACATGTTAGCATGATGGCGTTTGAACCAATTGTCTTTGACCTTGGTTTTACACTTTCGATGTTTATTTCATGTACGATAAGGTCAACGGCAAACTTTACATTCTGTGAGCTTAGGTCATACTACCTCTTGAGCTTTCATCTTGATCTTATATACAATGTTTCATGGGGTGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AB037150 [CCGCGCCGCCGCAGATCTGTGGCCGCGTTAGGGTTTCTTCGCCGGAATCGAGCGAGGAAGTAGGAGGGAGAGGAGGAGGAGGAGGAGGGCGACGAGTAGGAGGCGGCGGCGGCGGAGATGGACGTGGTGAAGGCGGCGCACGTCTCGGGGCGGACGCTGGAGAAGGTGGTGGTGCACCCGCTGGTGC TGCTCAGCATCGTCGACCACTACAACCGCGTCGCCCGCGACACCCGCAAGCGCGTCGTCGGCGTGCTCCTCGGCACCTCCTCCCGCGGTTCCGTCGATGTCACCAACTCCTACGCCGTGCCGTTTGAAGAGGATGACAAGGATCCGAGGATC TGGTTCCTCGATCATAATTACCACGAATCGATGTTTTCCATGTTCAAGAGGATCAACGCCAAGGAGCATGTTGTTGGCTGGTACAGCACCGGTCCAAAACTCAGGGAGAACGACTTGGATATACACGCACTATTCAATAACTATGTTCCTAACCCTGTCCTGGTGATTATTGATGTTCAACCCAAGGAGTTAGGAATACCCACCAAAGCATACTATGCTGTGGAGGAGGTTAAAGAGAATGCTACTCAAAAAAGTCAAAAGGTGTTTGTTCATGTTCCTTCAGAAATAGCTGCCCACGAGGTTGAGGAAATCGGAGTTGAGCATCTTCTGAGGGATGTCAAGGACACAACAATAAGCACGCTTGCGACAGAGGTAACCAGCAAGCTTGCAGCCTTGAAAGGACTGGACGCAAGGCTCAGGGAGATCCGTGGGTACTTAGATCTTGTAATTGAAGGGAAGCTCCCACTGAATCATGAGATTTTGTACCACTTGCAGGATGTGTTTAATCTGCTCCCCAATCTCAATGTAAACGAGCTTATTAAAGCCTTTGCAGTTAAAACAAACGATATGATGTTGGTCATATACTTGTCTTCTCTTATCCGGAGTGTCATCGCACTCCATAACTTGATCAATAACAAGATGCTAAACAAGGAGCATGAGAAAGCCGAGGATTCGAAGCCAACCGCCATACCTAGTGCTGCTGGGAGCTGAATGTGCTTTATTTGCCTTAGATTTTGGACCCAGTGGAAGCCAAAAGAATTGTGACATGTTAGCATGATGGCGTTTGAACCAATTGTCTTTGACCTTGGTTTTACACTTTCGATGTTTATTTCATGTACGATAAGGTCAACGGCAAACTTTACATTCTGTGAGCTTAGGTCATACTACCTCTTGAGCTTTCATCTTGATCTTATATACAATGTTTCATGGGGTGCAAAAAAAAAAAAAAA ] [+] EMBL OSS13278A [CCGCGCCGCCGCAGATCTGTGGCCGCGTTAGGGTTTCTTCGCCGGAATCGAGCGAGGAAGTAGGAGGGAGAGGAGGAGGAGGAGGAGGGCGACGAGTAGGAGGCGGCGGCGGCGGAGATGGACGTGGTGAAGGCGGCGCA NTCTCGGGGCGGACGCTGGAGAAGGTGGTGGTGCACCCGCTGGT C TGCTCAGCATCGTCGACCACTACAACCGCNTCGCCCGCNACACCCGCAAGCGCGTCGTCGGCGTGCTCCTCGGCACCTCCTCCCGCGGTTCCGTCGATGTCACCAACTCCTACGNCGTGCCGTTTGAAGAGGATGACAAGGATCCGAGGATCTTGGTTCCTCGATCATAATTACCACGGATCGATGTTTTNCATGTTCAAGAGGATCAACGNCAAGGAGCATGTTGTTTGTTGGTACAaaac ] [+] EMBL OSS12653A [CCGCGCCGCCGCAGATCTGTGGCCGCGTTAGGGTTTCTTCGCCGGAATCGAGCGAGGAAGTAGGAGGGAGAGGAGGAGGAGGAGGAGGGCGACGAGTAGGAGGCGGCGGCGGCGGAGATGGACGTGGTGAAGGCGGCGCA NTCTCGGGGCGGACGCTGGAGAAGGTGGTGGTGCACCCGCTGGTNCTTGCTCAGCATCGTCGACCACTACAACCGCGTCGCCCGCNACACCCGCAAGCNCGTCGTCGGCGTGCTCCTCGGCANCTCCTCCCGCGGTTCCGTCGATGTCACCAACTTCTACGNCGTNCCGTTTTAAGAGGATNACAAGGATNCNAGGATCTTGGTTNCTCGATCATAATTACCACGAAT ] [+] EMBL AU032633 [ CATATACTTGTCTTCTCTTANCCGGAGTGTCATCGCACTCCATAANTTGATCAATAACCAGATGCTANACAAGGAGCATGAGAAAGCCGAGGATTCGAAGCCAACCGCCATACCTAGTGCTGCTGGGAGCTGAATGTGCTTTATTTGCCTTAGATTTTGGNCCCAGTGGAAGCCNAAAGAATTGTGACATGTTAGCATGATGGCGTTTGAACCAATTGTCTTTGACCTTGGTTTTACNCTTTCGATGTTTATTTCATGTACGATAAGGTCAACGGCAAACTTTACATTCTGTGAGCTTAGGTCATACTACCTCTTGNGCTTTCATCTTGATCTTATATACAATGTTTCATGGGGTGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_15393#0 CCTCCGCAAGAAAGAAAGAAAAAGAGGGGAAGCAAAGCGCAGAGGCGGCCGTCGCAGCCG 60 consensus_15393#1 ------------------------------------------------------------ consensus_15393#0 CAACACAAGTCAGGGGAGGAGAGAGAGGCCGCGCCGCCGCAGATCTGTGGCCGCGTTAGG 120 consensus_15393#1 ----------------------------CCGCGCCGCCGCAGATCTGTGGCCGCGTTAGG 32 ******************************** consensus_15393#0 GTTTCTTCGCCGGAATCGAGCGAGGAAGTAGGAGGGAGAGGAGGAGGAGGAGGAGGGCGA 180 consensus_15393#1 GTTTCTTCGCCGGAATCGAGCGAGGAAGTAGGAGGGAGAGGAGGAGGAGGAGGAGGGCGA 92 ************************************************************ consensus_15393#0 CGAGTAGGAGGCGGCGGCGGCGGAGATGGACGTGGTGAAGGCGGCGCAGCTCTCGGGGCG 240 consensus_15393#1 CGAGTAGGAGGCGGCGGCGGCGGAGATGGACGTGGTGAAGGCGGCGCAN-TCTCGGGGCG 151 ************************************************ ********** consensus_15393#0 GACGCTGGAGAAGGTGGTGGTGCACCCGCTGGTGCTGCTCAGCATCGTCGACCACTACAA 300 consensus_15393#1 GACGCTGGAGAAGGTGGTGGTGCACCCGCTGGTGCTGCTCAGCATCGTCGACCACTACAA 211 ************************************************************ consensus_15393#0 CCGCGTCGCCCGCGACACCCGCAAGCGCGTCGTCGGCGTGCTCCTCGGCACCTCCTCCCG 360 consensus_15393#1 CCGCGTCGCCCGCNACACCCGCAAGCGCGTCGTCGGCGTGCTCCTCGGCACCTCCTCCCG 271 ************* ********************************************** consensus_15393#0 CGGCTCCGTCGATGTCACCAACTCCTACGCCGTGCCGTTTGAAGAGGATGACAAGGATCC 420 consensus_15393#1 CGGTTCCGTCGATGTCACCAACTCCTACGNCGTGCCGTTTGAAGAGGATGACAAGGATCC 331 *** ************************* ****************************** consensus_15393#0 GAGGATCT-GGTTCCTCGATCATAATTACCACGAATCGATGTTTTCCATGTTCAAGAGGA 479 consensus_15393#1 GAGGATCTTGGTTCCTCGATCATAATTACCACGAATCGATGTTTTCCATGTTCAAGAGGA 391 ******** *************************************************** consensus_15393#0 TCAACGCCAAGGAGCATGTTGTTGGCTGGTACAGCACCGGTCCAAAACTCAGGGAGAACG 539 consensus_15393#1 TCAACGCCAAGGAGCATGTTGTTGGCTGGTACAGCACCGGTCCAAAACTCAGGGAGAACG 451 ************************************************************ consensus_15393#0 ACTTGGATATACACGCACTATTCAATAACTATGTTCCTAACCCTGTCCTGGTGATTATTG 599 consensus_15393#1 ACTTGGATATACACGCACTATTCAATAACTATGTTCCTAACCCTGTCCTGGTGATTATTG 511 ************************************************************ consensus_15393#0 ATGTTCAACCCAAGGAGTTAGGAATACCCACCAAAGCATACTATGCTGTGGAGGAGGTTA 659 consensus_15393#1 ATGTTCAACCCAAGGAGTTAGGAATACCCACCAAAGCATACTATGCTGTGGAGGAGGTTA 571 ************************************************************ consensus_15393#0 AAGAGAATGCTACTCAAAAAAGTCAAAAGGTGTTTGTTCATGTTCCTTCAGAAATAGCTG 719 consensus_15393#1 AAGAGAATGCTACTCAAAAAAGTCAAAAGGTGTTTGTTCATGTTCCTTCAGAAATAGCTG 631 ************************************************************ consensus_15393#0 CCCACGAGGTTGAGGAAATCGGAGTTGAGCATCTTCTGAGGGATGTCAAGGACACAACAA 779 consensus_15393#1 CCCACGAGGTTGAGGAAATCGGAGTTGAGCATCTTCTGAGGGATGTCAAGGACACAACAA 691 ************************************************************ consensus_15393#0 TAAGCACGCTTGCGACAGAGGTAACCAGCAAGCTTGCAGCCTTGAAAGGACTGGACGCAA 839 consensus_15393#1 TAAGCACGCTTGCGACAGAGGTAACCAGCAAGCTTGCAGCCTTGAAAGGACTGGACGCAA 751 ************************************************************ consensus_15393#0 GGCTCAGGGAGATCCGTGGGTACTTAGATCTTGTAATTGAAGGGAAGCTCCCACTGAATC 899 consensus_15393#1 GGCTCAGGGAGATCCGTGGGTACTTAGATCTTGTAATTGAAGGGAAGCTCCCACTGAATC 811 ************************************************************ consensus_15393#0 ATGAGATTTTGTACCACTTGCAGGATGTGTTTAATCTGCTCCCCAATCTCAATGTAAACG 959 consensus_15393#1 ATGAGATTTTGTACCACTTGCAGGATGTGTTTAATCTGCTCCCCAATCTCAATGTAAACG 871 ************************************************************ consensus_15393#0 AGCTTATTAAAGCCTTTGCAGTTAAAACAAACGATATGATGTTGGTCATATACTTGTCTT 1019 consensus_15393#1 AGCTTATTAAAGCCTTTGCAGTTAAAACAAACGATATGATGTTGGTCATATACTTGTCTT 931 ************************************************************ consensus_15393#0 CTCTTATCCGGAGTGTCATCGCACTCCATAACTTGATCAATAACAAGATGCTAAACAAGG 1079 consensus_15393#1 CTCTTATCCGGAGTGTCATCGCACTCCATAACTTGATCAATAACAAGATGCTAAACAAGG 991 ************************************************************ consensus_15393#0 AGCATGAGAAAGCCGAGGATTCGAAGCCAACCGCCATACCTAGTGCTGCTGGGAGCTGAA 1139 consensus_15393#1 AGCATGAGAAAGCCGAGGATTCGAAGCCAACCGCCATACCTAGTGCTGCTGGGAGCTGAA 1051 ************************************************************ consensus_15393#0 TGTGCTTTATTTGCCTTAGATTTTGGACCCAGTGGAAGCCAAAAGAATTGTGACATGTTA 1199 consensus_15393#1 TGTGCTTTATTTGCCTTAGATTTTGGACCCAGTGGAAGCCAAAAGAATTGTGACATGTTA 1111 ************************************************************ consensus_15393#0 GCATGATGGCGTTTGAACCAATTGTCTTTGACCTTGGTTTTACACTTTCGATGTTTATTT 1259 consensus_15393#1 GCATGATGGCGTTTGAACCAATTGTCTTTGACCTTGGTTTTACACTTTCGATGTTTATTT 1171 ************************************************************ consensus_15393#0 CATGTACGATAAGGTCAACGGCAAACTTTACATTCTGTGAGCTTAGGTCATACTACCTCT 1319 consensus_15393#1 CATGTACGATAAGGTCAACGGCAAACTTTACATTCTGTGAGCTTAGGTCATACTACCTCT 1231 ************************************************************ consensus_15393#0 TGAGCTTTCATCTTGATCTTATATACAATGTTTCATGGGGTGCATCATGTTTTGTGATGC 1379 consensus_15393#1 TGAGCTTTCATCTTGATCTTATATACAATGTTTCATGGGGTGCA------------AAAA 1279 ******************************************** * consensus_15393#0 GGATTGTCGTACGATTAACTTCTAGTAAATGTTTACTTGACGCAAAAAAAAAAAAAAAA 1438 consensus_15393#1 AAAAAAAAAAAAAAAAAA-----AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1333 * * * ** * *** * * **************** |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||