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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15416#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 21 consensus length = 1990 fasta sequence
[CTCTCACTCCCCTCGGTTGGTTCGCTCGCTCCCCGGGATTATCAGCCATGGGGCCCACCCGTCAGTCTCACTCCCTCCTCCTCACCTTCCTCCTCGTCGGCGCCGCCGCCGCCGCCGCCGCGGCCTCGCCGGAGGACGGGAGCCCCTTCCTCCGCCTCCCCACCGCCTCGGACCTCCCCGTCCCCGCCGGGCAGCTCCCCCGCTCCGCCGCCGTCGGCCTCATCCGCGCCCTCAACCTCCACCCGCGCGACGCCTCCCCCTCCCCCTCCAGCCGCGGTGATGGCGACGTCCCCGCCGGAACCCTAGTCGAGAGGCCCATCCACCTCGCCTCCATGGCCACCGGGAAGAGCGGCGGCTCGTCGGCTGAAGACCTCGGCCACCACGCCGGGTACTACCGCCTCCCCAACACCCACGACGCAAGGCTGTTCTACTTCTTCTTCGAGTCGAGGGGGAGCAAGGGGGAGGACGACCCCGTGGTGATCTGGCTGACGGGGGGCCCCGGCTGCAGCAGCGAGCTCGCGCTCTTCTACGAGAACGGGCCGTTCCACATCGCCGACAACATGTCTCTCGTCTGGAACGACTTTGGCTGGGATCAGGAGTCGAATCTGATATATGTTGATCAGC-CCACGGGTACTGGGTTCAGCTACAGCTCCAATCCGCGCGACACCCGTCACGATGAAGCT-GGTGTTAGCAACGACCTGTATGCCTTTCTTCAGGCCTTCTTCACTGAGCACCCGAATTTTGCTAAAAATGATTTCTATATTACTGGGGAATCGTATGCTGGACACTATATTCCTGCCTTTGCAAGTCGAGTGTACAAGGGGAACAAGAACAGTGAGGGCATTCACATCAATTTGAAGGGTTTTGCTATTGGCAATGGGTTAACGGATCCAGCAATACAATACAAGGCATACACTGATTACTCATTGGAT-ATGGGGTTAATTACAAAATCACAGTTTAA-CAGGATTAACAAAATTGTTCCAACTTGTGAACTTGCTATCAAGCTCTGTGGTACCTCTGGCACTATATCTTGCCTTGGCGCATATGTTGTCTGCAATCTAATATTCTCTTCCATCGAGACAATAATTGGGAAGAAAAATTATTATGACATCAGGAAGCCATGTGTGGGGAGCCTATGCTATGACCTCTCTAATATGGAGAAGTTTCTCCAATTGAAATCAGTCAGAGAGAGCCTAGGTGTTGGAGACATACAGTTTGTATCATGCAGCCCAACTGTATATCAGGCCATGCTGCTAGATTGGATGAGGAACCTTGAAGTTGGAATCCCTGAACTCCTTGAGAATGACATCAAAGTGTTGATTTATGCTGGAGAGTATGATCTCATATGCAACTGGTTAGGAAACTCAAGATGGGTGAATTCTATGGAATGGTCTGGAAAGGAGGCTTTTGTGTCCTCATCTGAGGAACCTTTCACAGTTGATGGAAAAGAAGCCGGTATTCTGAAAAGCTATGGACCTTTGAGTTTCTTGAAGGTCCACGAT-GCTGGCCACATGGTACCAATGGATCAACCGAAGGTC-GCTCTGGAGATGCTGATGAGGTGGACCTCAGGAAACCTTTCCAACGCATCCTCGAGCTTCCAGAGGCTCGATT-TTACCA-TGTGATATACACA--CTCT-GTCCTCTTGT-GACACGATCAGAGGAACATGGTTTCCCCATAAA-TTAGTATAAAGTGCTTAGTAGGCACGTCAGAATGA-TTTTAGGTGATGACAAGCTCACTGCTACCGTACAGATGTTATTTCCCTTGTACGGTGCTTGAGTCA-CTGAAGTATCGGTGACGCCA-CTCGATTGT-TAGCATGTAATAAAGCTTAGAATTGTTATGGAC-AGAAGCCAATCTCTTTGTTATGAGGGCTGTTTATGTCCAGGTCTTGTATGCTATTATAATACTTATGGCTTGTGCTATGGATGGTATAATCTGTGCTCCAAACTATACAGTAAATATTTTTGCGGGAATTGGGCGTTCCCAAAAAAAAAA]
[+] EMBL AK120117 [CTCTCACTCCCCTCGGTTGGTTCGCTCGCTCCCCGGGATTATCAGCCATGGGGCCCACCCGTCAGTCTCACTCCCTCCTCCTCACCTTCCTCCTCGTCGGCGCCGCCGCCGCCGCCGCCGCGGCCTCGCCGGAGGACGGGAGCCCCTTCCTCCGCCTCCCCACCGCCTCGGACCTCCCCGTCCCCGCCGGGCAGCTCCCCCGCTCCGCCGCCGTCGGCCTCATCCGCGCCCTCAACCTCCACCCGCGCGACGCCTCCCCCTCCCCCTCCAGCCGCGGTGATGGCGACGTCCCCGCCGGAACCCTAGTCGAGAGGCCCATCCACCTCGCCTCCATGGCCACCGGGAAGAGCGGCGGCTCGTCGGCTGAAGACCTCGGCCACCACGCCGGGTACTACCGCCTCCCCAACACCCACGACGCAAGGCTGTTCTACTTCTTCTTCGAGTCGAGGGGGAGCAAGGGGGAGGACGACCCCGTGGTGATCTGGCTGACGGGGGGCCCCGGCTGCAGCAGCGAGCTCGCGCTCTTCTACGAGAACGGGCCGTTCCACATCGCCGACAACATGTCTCTCGTCTGGAACGACTTTGGCTGGGATCAGGAGTCGAATCTGATATATGTTGATCAGC CCACGGGTACTGGGTTCAGCTACAGCTCCAATCCGCGCGACACCCGTCACGATGAAGCT GGTGTTAGCAACGACCTGTATGCCTTTCTTCAGGCCTTCTTCACTGAGCACCCGAATTTTGCTAAAAATGATTTCTATATTACTGGGGAATCGTATGCTGGACACTATATTCCTGCCTTTGCAAGTCGAGTGTACAAGGGGAACAAGAACAGTGAGGGCATTCACATCAATTTGAAGGGTTTTGCTATTGGCAATGGGTTAACGGATCCAGCAATACAATACAAGGCATACACTGATTACTCATTGGATAATGGGGTTAATTACAAAATCACAGTTTAA CAGGATTAACAAAATTGTTCCAACTTGTGAACTTGCTATCAAGCTCTGTGGTACCTCTGGCACTATATCTTGCCTTGGCGCATATGTTGTCTGCAATCTAATATTCTCTTCCATCGAGACAATAATTGGGAAGAAAAATTATTATGACATCAGGAAGCCATGTGTGGGGAGCCTATGCTATGACCTCTCTAATATGGAGAAGTTTCTCCAATTGAAATCAGTCAGAGAGAGCCTAGGTGTTGGAGACATACAGTTTGTATCATGCAGCCCAACTGTATATCAGGCCATGCTGCTAGATTGGATGAGGAACCTTGAAGTTGGAATCCCTGAACTCCTTGAGAATGACATCAAAGTGTTGATTTATGCTGGAGAGTATGATCTCATATGCAACTGGTTAGGAAACTCAAGATGGGTGAATTCTATGGAATGGTCTGGAAAGGAGGCTTTTGTGTCCTCATCTGAGGAACCTTTCACAGTTGATGGAAAAGAAGCCGGTATTCTGAAAAGCTATGGACCTTTGAGTTTCTTGAAGGTCCACGAT GCTGGCCACATGGTACCAATGGATCAACCGAAGGTC GCTCTGGAGATGCTGATGAGGTGGACCTCAGGAAACCTTTCCAACGCATCCTCGAGCTTCCAGAGGCTCGATT TTACCA TGTGATATACACA CTCT GTCCTCTTGT GACACGATCAGAGGAACATGGTTTCCCCATAAA TTAGTATAAAGTGCTTAGTAGGCACGTCAGAATGA TTTTAGGTGATGACAAGCTCACTGCTACCGTACAGATGTTATTTCCCTTGTACGGTGCTTGAGTCA CTGAAGTATCGGTGACGCCA CTCGATTGT TAGCATGTAATAAAGCTTAGAATTGTTATGGAC AGAAGCCAATCTCTTTGTTATGAGGGCTGTTTATGTCCAGGTCTTGTATGCTATTATAATACTTATGGCTTGTGCTATGGATGGTATAA ]
[+] EMBL CB660733 [ CCCTCGGTTGGTTCGCTCGCTCCCCGGGATTATCAGCCATGGGGCCCACCCGTCAGTCTCACTCCCTCCTCCTCACCTTCCTCCTCGTCGGCGCCGCCGCCGCCGCCGCCGCGGCCTCGCCGGAGGACGGGAGCCCCTTCCTCCGCCTCCCCACCGCCTCGGACCTCCCCGTCCCCGCCGGGCAGCTCCCCCGCTCCGCCGCCGTCGGCCTCATCCGCGCCCTCAACCTCCACCCGCGCGACGCCTCCCCCTCCCCCTCCAGCCGCGGTGATGGCGACGTCCCCGCCGGAACCCTAGTCGAGAGGCCCATCCACCTCGCCTCCATGGCCACCGGGAAGAGCGGCGGCTCGTCGGCTGAAGACCTCGGCCACCACGCCGGGGACTACCGCCTCCCCAACACCCACGACGCAAGGCTGTTCTACTTCTTCTTCGAGTCGAGGGGGAGCAAGGGGGAGGACGACCCCGTGGTGATCTGGCTGACGGGGGGCCCCGGCTGCATCAGCTAGCTCGCGCTCGTCTACTAGAACGGGGCGTTCCACATCGCCTACAACAAGTCTCTCGTATGG ]
[+] EMBL CA755899 [ CTCGGTTGGTTCGCTCGCTCCCCGGGATTATCAGCCATGGGGCCCACCCGTCAGTCTCACTCCCTCCTCCTCACCTTCCTCCTCGTCGGCGCCGCCGCCGCCGCCGCCGCGGCCTCGCCGGAGGACGGGAGCCCCTTCCTCCGCCTCCCCACCGCCTCGGACCTCCCCGTCCCCGCCGGGCAGCTCCCCCGCTCCGCCGCCGTCGGCCTCATCCGCGCCCTCAACCTCCACCCGCGCGACGCCTCCCCCTCCCCCTCCAGCCGCGGTGATGGCGACGTCCCCGCCGGAACCCTAGTCGAGAGGCCCATCCACCTCGCCTCCATGGCCACCGGGAAGAGCGGCGGCTCGTCGGCTGAAGACCTCGGCCACCACGCCGGGTACTACCGCCTCCCCAACACCCACGACGCNAGGCTGTTCTACTTCTTCTTCGAGTCGAGGGGGAGCAAGGGGGAGGACGACCCCGTGGTGATCTGGCTGACGGNGGGCCCCGGCTGCAGCAGCGAGCTCGCGCTCTTCTACGAGAACGGGCCGTTCCACATCGCCGACNACATGTCTCTCGTCTGGAACGACTTTGGCTGGGATCAGGAGTCGAATCTGATATATGTTGATCAGC CC ]
[+] EMBL CB678636 [ GCTCGCCCTCCGGGATTATCAGCCATGGGGCCCACCCGTCAGTCTCACTCCCTCCTCCTCACCTTCCTCCTCGTCGGCGCCGCCGCCGCCGCCGCCGCGGCCTCGCCGGAGGACGGGAGCCCCTTCCTCCGCCTCCCCACCGCCTCGGACCTCCCCGTCCCCGCCGGGCAGCTCCCCCGCTCCGCCGCCGTCGGCCTCATCCGCGCCCTCAACCTCCACCCGCGCGACGCCTCCCCCTCCCCCTCCAGCCGCGGTGATGGCGACGTCCCCGCCGGAACCCTAGTCGAGAGGCCCATCCACCTCGCCTCCATGGCCACCGGGAAGAGCGGCGGCTCGTCGGCTGAAGACCTCGGCCACCACGCCGGGTACTACCGCCTCCCCAACACCCACGACGCAAGGCTGTTCTACTTCTTCTTCGAGTCGAGGGGGAGCAAGGGGGAGGACGACCCCGTGGTGATCTGGCTGACGGGGGGCCCCGGCTGCAGCAGCGAGCTCGCGCTCTTCTACGAGAACGGGCCGTTCCACATCGCCGACAACATGTCTCTCGTCTGGAACGACTTTGGCTGGGATCAGGAGTCGAATCTGATATATGTTGATCAGC CCACGGGTACTGGGTTCAGCTACAGCTCCAATCCGCGCGACACCCGTCACGATGAAGCTGGGTG TAGCAACGACCTGTATGCCTTTCTTCAGGCCTTCTTCACTGAGCACCCGAATTTTGCTAAAAATGATTTCTATATTACTGGGGAATCGAATGCTGGAC ]
[+] EMBL CB665930 [ TCAGCCCCGGGGCCCACCCGTCAGTCTCACTCCCTCCTCCTCACCTTCCTCCTCGTCGGCGCCGCCGCCGCCGCCGCCGCGGCCTCGCCGGAGGACGGGAGCCCCTTCCTCCGCCTCCCCACCGCCTCGGACCTCCCCGTCCCCGCCGGGCAGCTCCCCCGCTCCGCCGCCGTCGGCCTCATCCGCGCCCTCAACCTCCACCCGCGCGACGCCTCCCCCTCCCCCTCCAGCCGCGGTGATGGCGACGTCCCCGCCGGAACCCTAGTCGAGAGGCCCATCCACCTCGCCTCCATGGCCACCGGGAAGAGCGGCGGCTCGTCGGCTGAAGACCTCGGCCACCACGCCGGGTACTACCGCCTCCCCAACACCCACGACGCAAGGCTGTTCTACTTCTTCTTCGAGTCGAGGGGGAGCAAGGGGGAGGACGACCCCGAGGTGATCTGGCTGACGGGGGGCCCCGGCTGCAGCAGCGAGCTCGCGCTCTTCTACGAGAACGGGCCGTTCCACATCGCCGACAACATGTCTCTCGGCTGGAACGACTTTGGCTGGGATCAGGAGTCGAATCTGATATATGTTGATCAGCGCCACGGGTACTGGGTTCAGCTACAGCTCCTATCCGCGCGACACCCGTGACGATGAAGCT GGTGTTAGCAACGAC ]
[+] EMBL CB663926 [ CTCGTCGGCGCCGCCGCCGCCGCCGCCGCGGCCTCGCCGGAGGACGGGAGCCCCTTCCTCCGCCTCCCCACCGCCTCGGACCTCCCCGTCCCCGCCGGGCAGCTCCCCCGCTCCGCCGCCGTCGGCCTCATCCGCGCCCTCAACCTCCACCCGCGCGACGCCTCCCCCTCCCCCTCCAGCCGCGGTGATGGCGACGTCCCCGCCGGAACCCTAGTCGAGAGGCCCATCCACCTCGCCTCCATGGCCACCGGGAAGAGCGGCGGCTCGTCGGCTGAAGACCTCGGCCACCACGCCGGGGACTACCGCCTCCCCAACACCCACGACGCAAGGCTGTTCTACTTCTTCTTCTAGTCGAGGGGGAGCAAGGGGGAGGACGACCCCGTGGTGATCTGGCTGACGGGGGGCCCCGGCTGCAGCAGCGAGCTCGCGCTCTTCTACGAGAACGGGCCGTTCCACATCGCCGACAACATGTCTCTCGTCTGGAACGACTTTGGCTGGGATCAGGAGTCGAATCTGATATATGTTGATCAGC CCACGGGTACTGGGTTCAGCTACAGCTCCAATCCGCGCGACACCCGTCACGAGGAAGCT GGTGTTAGCAACGACCTGTATGCCTTTCTTCAGGCCTTCTTCAGTGAGCACCCGAATTTTGCTAAAAATGATTTCTATATTACTGGGGAATCGTATGCTGGACACTATATTCCTGC ]
[+] EMBL OSCBP31 [ CGCCCTCAACCTCCACCCGCGCGACGCCTCCCCCTCCCCCTCCAGCCGCGGTGATGGCGACGTCCCCGCCGGAACCCTAGTCGAGAGGCCCATCCACCTCGCCTCCATGGCCACCGGGAAGAGCGGCGGCTCGTCGGCTGAAGACCTCGGCCACCACGCCGGGTACTACCGCCTCCCCAACACCCACGACGCAAGGCTGTTCTACTTCTTCTTCGAGTCGAGGGGGAGCAAGGGGGAGGACGACCCCGTGGTGATCTGGCTGACGGGGGGCCCCGGCTGCAGCAGCGAGCTCGCGCTCTTCTACGAGAACGGGCCGTTCCACATCGCCGACAACATGTCTCTCGTCTGGAACGACTTTGGCTGGGATCAGGAGTCGAATCTGATATATGTTGATCAGC CCACGGGTACTGGGTTCAGCTACAGCTCCAATCCGCGCGACACCCGTCACGATGAAGCT GGTGTTAGCAACGACCTGTATGCCTTTCTTCAGGCCTTCTTCACTGAGCACCCGAATTTTGCTAAAAATGATTTCTATATTACTGGGGAATCGTATGCTGGACACTATATTCCTGCCTTTGCAAGTCGAGTGTACAAGGGGAACAAGAACAGTGAGGGCATTCACATCAATTTGAAGGGTTTTGCTATTGGCAATGGGTTAACGGATCCAGCAATACAATACAAGGCATACACTGATTACTCATTGGAT ATGGGGTTAATTACAAAATCACAGTTTAA CAGGATTAACAAAATTGTTCCAACTTGTGAACTTGCTATCAAGCTCTGTGGTACCTCTGGCACTATATCTTGCCTTGGCGCATATGTTGTCTGCAATCTAATATGCTCTTCCATCGAGACAATAATTGGGAAGAAAAATTATTATGACATCAGGAAGCCATGTGTGGGGAGCCTATGCTATGACCTCTCTAATATGGAGAAGTTTCTCCAATTGAAATCAGTCAGAGAGAGCCTAGGTGTTGGAGACATACAGTTTGTATCATGCAGCCCAACTGTATATCAGGCCATGCTGCTAGATTGGATGAGGAACCTTGAAGTTGGAATCCCTGAACTCCTTGAGAATGACATCAAAGTGTTGATTTATGCTGGAGAGTATGATCTCATATGCAACTGGTTAGGAAACTCAAGATGGGTGAATTCTATGGAATGGTCTGGAAAGGAGGCTTTTGTGTCCTCATCTGAGGAACCTTTCACAGTTGATGGAAAAGAAGCCGGTATTCTGAAAAGCTATGGACCTTTGAGTTTCTTGAAGGTCCACGAT GCTGGCCACATGGTACCAATGGATCAACCGAAGGTC GCTCTGGAGATGCTGATGAGGTGGACCTCAGGAAACCTTTCCAACGCATCCTCGAGCTTCCAGAGGCTCGATT TTACCA TGTGATATACACA CTCT GTCCTCTTGT GACACGATCAGAGGAACATGGTTTCCCCATAAA TTAGTATAAAGTGCTTAGTAGGCACGTCAGAATGA TTTTAGGTGATGACAAGCTCACTGCTACCGTACAGATGTTATTTCCCTTGTACGGTGCTTGAGTCA CTGAAGTATCGGTGACGCCA CTCGATTGT TAGCATGTAATAAAGCTTAGAATTGTTATGGAC AGAAGCCAATCTCTTTGTTATGAGGGCTGTTTATGTCCAGGTCTTGTATGCTATTATAATACTTATGGCTTGTGCTATGGATGGTATAATCTGTGCTCCAAACTATACAGTAAATATTTTTGCGGGAATTGGGCGTTCC ]
[+] EMBL CB644508 [ CCCGTGGTGATCTGGCTGACGGGGGGCCCCGGCTGCAGCAGCGAGCTCGCGCTCTTCTACGAGAACGGGCCGTTCCACATCGCCGACAACATGTCTCTCGTCTGGAACGACTTTGGCTGGGATCAGGAGTCGAATCTGATATATGTTGATCAGC CCACGGGTACTGGGTTCAGCTACAGCTCCAATCCGCGCGACACCCGTCACGATGAAGCT GGTGTTAGCAACGACCTGTATGCCTTTCTTCAGGCCTTCTTCACTGAGCACCCGAATTTTGCTAAAAATGATTTCTATATTACTGGGGAATCGTATGCTGGACACTATATTCCTGCCTTTGCAAGTCGAGTGTACAAGGGGAACAAGAACAGTGAGGGCATTCACATCAATTTGAAGGGTTTTGCTATTGGCAATGGGTTAACGGATCCAGCAATACAATACAAGGCATACACTGATTACTCATTGGAT ATGGGGTTAATTACAAAATCACAGTTTAA CAGGATTAACAAAATTGTTCCAACTTGTGAACTTGCTATCAAGCTCTGTGGTACCTCTGGCACTATATCTTGCCTTGGCGCATATGTTGTCTGCAATCTAATATTCTCTTCCATCGAGACAATAATTGGGAAGAAAAATTATTATGACATCAGGAAGCCATGTGTGGGGAGCCTATGCTATGACCTCTCTAATATGGAGAAGTTTCTCCAATTGAAATCAGTCAGAGAGAGCCTAGGTGTTGGAGACATACAGTTTGTATCATGCAGCCCAACTGTATATCANGCCATGCTGCT ]
[+] EMBL OSC104521 [ CACTGAGCACCCGAATTTTGCTAAAAATGATTTCTATATTACTGGGGAATCGTATGCTGGACACTATATTCCTGCCTTTGCAAGTCGAGTGTACAAGGGGAACAAGANCAGTGAGGGCATTCACATCAATTTGAAGGGNTTTGCTATTGGCAATGGGTTAACGGATCCAGCANTACANTACANGGCATACACTGNTTACTCATTGGAT ATGGGGTTANTTACACAATCACAGTTTAACCAGG ]
[-] EMBL CB665931 [ AATGATTTCTATATTACTGGGGAATCGTATGCTGGACACTATATTCCTGCCTTTGCAAGTCGAGTGTACAAGGGGAACAAGAACAGTGAGGGCATTCACATCAATTTGAAGGGTTTTGCTATTGGCAATGGGTTAACGGATCCAGCAATACAATACAAGGCATACACTGATTACTCATTGGAT ATGGGGTTAATTACAAAATCACAGTTTAA CAGGATTAACAAAATTGTTCCAACTTGTGAACTTGCTATCAAGCTCTGTGGTACCTCTGGCACTATATCTTGCCTTGGCGCATATGTTGTCTGCAATCTAATATTCTCTTCCATCGAGACAATAATTGGGAAGAAAAATTATTATGACATCAGGAAGCCATGTGTGGGGAGCCTATGCTATGACCTCTCTAATATGGAGAAGTTTCTCCAATTGAAATCAGTCAGAGAGAGCCTAGGTGTTGGAGACATACAGTTTGTATCATGCAGCCCAACTGTATATCAGGCCATGCTGCTAGATTGGATGAGGAACCTTGAAGTTGGAATCCCTGAACTCCTTGAGAATGACATCAAAGTGTTGATTTATGCTGGAGAGTATGATCTCATATGCAACTGGTTAGGAAACTCAAGATGGGTGAATTCTATGGAATGGTCTGGAAAGGAGGCTTTTGTGTCCTCATCTGAGGAACCTTTCACAGTTGATGGAAAAGAAGCCGGTATTCTGAAAAGCTATGGACCTTTGAGTTTCTTGAAGGTCCACGAT GCTGGCCACATGGTACCAATGGATCAACCGAAGGTC GCTCTGGAGATGCTGATGAGGTGGACCTCAGGAAACATTgc ]
[-] EMBL CB663927 [ GGAATCGTATGCTGGACACTATATTCCTGCCTTTGCAAGTCGAGTGTACAAGCGGAACAAGAACAGTGAGGGCATTCACATCAATTTGAAGGGTTTTGCTATTGGCAATGGGTTAACGGATCCAGCAATACAATACAAGGCATACACTGATTACTCATTGGAT ATGGGGTTAATTACAAAATCACAGTTTAA CAGGATTAACAAAATTGTTCCAACTTGTGAACTTGCTATCAAGCTCTGTGGTACCTCTGGCACTATATCTTGCCTTGGCGCATATGTTGTCTGCAATCTAATATTCTCTTCCATCGAGACAATAATTGGGAAGAAAAATTATTATGACATCAGGAAGCCATGTGTGGGGAGCCTATGCTATGACCTCTCTAATATGGAGAAGTTTCTCCAATTGAAATCAGTCAGAGAGAGCCTAGGTGTTGGAGACATACAGTTTGTATCATGCAGCCCAACTGTATATCAGGCCATGCTGCTAGATTGGATGAGGAACCTTGAAGTTGGAATCCCTGAACTCCTTGAGAATGACATCAAAGTGTTGATTTATGCTGGAGAGTATGATCTCATATGCAACTGGTTAGGAAACTCAAGATGGGTGAATTCTATGGAATGGTCTGGAAAGGAGGCTTTTGTGTCCTCATCTGAGGAACCTTTCACAGTTGATGGAAAAGAAGCCGGTATTCTGAAAAGCTATGGACCTTTGAGTTTCTTGAAGGTCCACGAT GCTGGCCACATGGTACCAATGGATCAACCGAAGGTC GCTCTGGAGATGCTGATGAGGTGGACCTCAGGAAACCTTTC ]
[+] EMBL AU173376 [ AGCAATACAATACAAGGCATACACTGATTACTCATTGGAT ATGGGGTTAATTACAAAATCACAGTTTAA CAGGATTAACAAAATTGTTCCAACTTGTGAACTTGCTATCAAGCTCTGTGGTACCTCTGGCACTATATCTTGCCTTGGCGCATATGTTGTCTGCAATCTAATATTCTCTTCCATCGAGACAATAATTGGGAAGAAAAATTATTATGACATCAGGAAGCCATGTGTGGGGAGCCTATGCTATGACCTCTCTAATATGGAGAAGTTTCTCCAATTGAAATCAGTCAGAGAGAGCCTAGGTGTTGGAGACATACAGTTTGTATCATGCAGCCCAACTGTATATCAGGCCATGCTGCTAGATTGGATGAGGAACCTTGAAGTTGGAATCCCTGAACTCCTTGAGAATGACATCAAAGTGTTGAT ]
[-] EMBL CB644509 [ AGTCAGAGAGAGCCTAGGTGTTGGAGACATACAGTTTGTATCATGCAGCCCAACTGTATATCAGGCCATGCTGCTAGATTGGATGAGGAACCTTGAAGTTGGAATCCCTGAACTCCTTGAGAATGACATCAAAGTGTTGATTTATGCTGGAGAGTATGATCTCATATGCAACTGGTTAGGAAACTCAAGATGGGTGAATTCTATGGAATGGTCTGGAAAGGAGGCTTTTGTGTCCTCATCTGAGGAACCTTTCACAGTTGATGGAAAAGAAGCCGGTATTCTGAAAAGCTATGGACCTTTGAGTTTCTTGAAGGTCCACGAT GCTGGCCACATGGTACCAATGGATCAACCGAAGGTC GCTCTGGAGATGCTGATGAGGTGGACCTCAGGAAACCTTTCCAACGCATCCTCGAGCTTCCAGAGGCTCGATT TTACCA TGTGATATACACA CTCT GTCCTCTTGT GACACGATCAGAGGAACATGGTTTCCCCATAAA TTAGTATAAAGTGCTTAGTAGGCACGTCAGAATGA TTTTAGGTGATGACAAGCTCACTGCTACCGTACAGATGTTATTTCCCTTGTACGGTGCTTGAGTCA CTGAAGTATCGGTGACGCCA CTCGATTGT TAGCATGTAATAAAGCTTAGAATTGTTATGGAC AGAAGCCAATCTCTTTGTTATGAGGGCTGTTTATGTCCAGGTCTTGTATGCTATTATAATACTTATGGCTTGTGCT ]
[-] EMBL CB678637 [ GCAGCCCACCTGTATATCAGGCCATGCTGCTAGATTGGATGAGGAACCTTGAAGTTGGAATCCCTGAACTCCTTGAGAATGACATCAAAGTGTTGATTTATGCTGGAGAGTATGATCTCATATGCAACTGGTTAGGAAACTCAAGATGGGTGAATTCTATGGAATGGTCTGGAAAGGAGGCTTTTGTGTCCTCATCTGAGGAACCTTTCACAGTTGATGGAAAAGAAGCCGGTATTCTGAAAAGCTATGGACCTTTGAGTTTCTTGAAGGTCCACGAT GCTGGCCACACGGTCCCAATGGATCACCCGAAGGTC GCTCTGGAGATGCTGATCAGGTGGACCTCAGGAAACCTTTCCAACGCATCCTCGAGCTTCCAGAGGGTTGATT TTCCCA TGTGATATACACA CTCT GTCCTCTTGT GACACGATCAGAGGAACACGGTTTCCCCATAAA TTAGTATAAAGTGCTTAGTAGGCCCGTCAGAATGA TTTTAGGTGATGACAAGCTCACTGCTACCGTACAGATGTTATTTCCCTTGTACGGTGCTTGAGTCA CTGAAGTATCGGTGACGCCC CTCGATTGT TAGCATGTAATAAAGCTTAGAATTGTTATGGAC CGAAGCCAATCTCTTTGTTATGAGGCCTc ]
[-] EMBL CB660734 [ AACTGTATATCAGGCCATGCTGCTAGATTGGATGAGGAACCTTGAAGTTGGAATCCCTGAACTCCTTGAGAATGACATCAAAGTGTTGATTTATGCTGGAGAGTATGATCTCATATGCAACTGGTTAGGAAACTCAAGATGGGTGAATTTTATGGAATGGTCTGGAAAGGAGGCTTTTGTGTCCTCATTTGAGGAACCTTTCACAGTTGATGGAAAAGAAGCCGGTATTTTGAAAAGCTATGGACCTTTGAGTTTCTTGAAGGTCCACGAT GCTGGCCCCATGGTACCAATGGATCAACCGAAGGTC GCTTTGGAGATGCTGATGAGGTGGACCTCAGGAAACCTTTCCAACGCATCCTCGAGCTTCCAGAGGCTCGATT TTACCA TGTGATATACCCC CTCT GTCCTCTTGT GACACGATCAGAGGAACATGGTTTCCCCATAAA TTAGTATAAAGTGCTTAGTAGGCACGTCAGAATGA TTTTAGGTGATGACAAGCTCCCTGCTACCGTACAGATGTTATTTCCCTTGTACGGTGCTTGAGTCA CTGAAGTATCGGTGACGCCC CTCGATTGT TAGCATGTAATAAAGCTTAGAATTGTTATGGAC AGAAGCCAATCTCTTTGTTATGAGGGCTGTTTATGTCCAGGTCTTGTATGCTATTATAATACTTATGGAGGGTGCTATGGATGGTATAATCTGTGCTCCAAACTATAAAGGAAATAT ]
[+] EMBL AU092090 [ ACTCCTTGAGAATGNCATCAAAGTGTTGATTTATGCTGAAGAGTATGATCTCATATGCAACTGGTTAGGAAACTCAAGATGGGTGAATTCTATGGAATGGTCTGGAAAGGAGGCTTTTGTGTCCTCATCTGAGGAACCTTTCACAGTTGATGGAAAAGAAGCCGGTATTCTGAAAAGCTATGGACCTTTGAGTTTCTTGAAGGTCCACGAT GCTGGCCACATGGTACCAATGGATCAACCGAAGGTC GCTCTGGAGATGCTGATGAGGTGGACCTCAGGAAACCTTTCCAACGCATCCTCGAGCTTCCAGAGGCTCGATT TTACCA TGTGATATACACA CTCT GTCCTCTTGT GACACGATCAGAGGAACATGGTTTCCCCATAAA TTAGTATAAAGTGCTTAGTAGGCACGTCAGAATGA TTTTAGGTGATGACAAGCTCACTGCTACCGTACAGATGTTATTTCCCTTGTACGGTGCTTGAGTCA CTGAAGTATCGGTGACGCCA CTCGATTGT TAGCATGTAATAAAGCTTAGAATTGTTATGGAC AGAAGCCAATCTCTTTGTTATGAGGGCTGTTTATGTCCAGGTCTTGTATGCTATTATAATACTTATGGCTTGTGCTATGGATGGTATAATCTGTGCTCCAAACTATACAGTAAATATTTTTGCGGGAAaaaaaa ]
[+] EMBL AK059488 [ GATGGAAAAGAAGCCGGTATTCTGAAAAGCTATGGACCTTTGAGTTTCTTGAAGGTCCACGAT GCTGGCCACATGGTACCAATGGATCAACCGAAGGTC GCTCTGGAGATGCTGATGAGGTGGACCTCAGGAAACCTTTCCAACGCATCCTCGAGCTTCCAGAGGCTCGATT TTACCA TGTGATATACACA CTCT GTCCTCTTGT GACACGATCAGAGGAACATGGTTTCCCCATAAA TTAGTATAAAGTGCTTAGTAGGCACGTCAGAATGA TTTTAGGTGATGACAAGCTCACTGCTACCGTACAGATGTTATTTCCCTTGTACGGTGCTTGAGTCA CTGAAGTATCGGTGACGCCA CTCGATTGT TAGCATGTAATAAAGCTTAGAATTGTTATGGAC AGAAGCCAATCTCTTTGTTATGAGGGCTGTTTATGTCCAGGTCTTGTATGCTATTATAATACTTATGGCTTGTGCTATGGATGGTATAATCTGT ]
[+] EMBL BI807210 [ ACGATGGNTGGCCACAGTGNACCAATGGATCAACCGAAGGTCTGCTCTGGAGATGCTGATGAGGT GACCTCAGGAAACCTTTCCAACGCATCCTCGAGCTTCCAGAGGCTCGATT TTACCA TGTGATATACACAAGCTCT GTCCTCTTGT GACACGATCAGAGGAACATGGTTTCCCCATAAA TTAGTATAAAGTGCTTAGTAGGCACGTCAGAATGA TTTTAGGTGATGACAAGCTCACTGCTACCGTACAGATGTTATTTCCCTTGTACGGTGCTTGAGTCACCTGAAGTATCGGTGACGCCACCTCGATTGTNTAGCATGTAATAAAGCTTAGAATTGTTATGGAC AGAAGCCCATCTCTTTGTTATGAGGGCTGTTTATGTCCAGGTCTTGTATGCTATTATAATACTTATGGCTTGTGCTATGGATGGTATAATCTGTGCTCC AACTATAC GTAAATATTTTTGCGGGAATTGGGCGTTCCCAAAAAAAAAA]
[+] EMBL BI797318 [ TCGATTGTTACCAGGGTGATAGACACA CTCTGGTCCTCTTGTGGACACGATCAGAGGAACATGGTTTCCCCATAAATTTAGTATAAAGTGCTTAGTAGGCACGTCAGAATGATTTTTAGGTGATGACAAGCTCACTGCTACCGTACAGATGTTATTTCCCTTGTACGGTGCTTGAGTCA CTGAAGTATCGGTGACGCCG CTCGATTGT TAGCATGTAATAAAGCTTAGAATTGTTATGGACAAGAAGCCAATCTCTTTGTTATGA GGCTGTTTATGTCCAGGTCTTGTATGCTATTATAATACTTATGGCTTGTGCTATGGATGGTATAATCTGTGCTCCAAACTATACAGTAAATATTTTTGCTGGAATTGGGCGTTCCCAAAAAAAAAA]
[+] EMBL AK058769 [ AGTAGGCACGTCAGAATGA TTTTAGGTGATGACAAGCTCACTGCTACCGTACAGATGTTATTTCCCTTGTACGGTGCTTGAGTCA CTGAAGTATCGGTGACGCCA CTCGATTGT TAGCATGTAATAAAGCTTAGAATTGTTATGGAC AGAAGCCAATCTCTTTGTTATGAGGGCTGTTTATGTCCAGGTCTTGTATGCTATTATAATACTTATGGCTTGTGCTATGGATGGTATAATCTGTGCTCCAAACTATACAGTAAATA ]
[-] EMBL AU165167 [ GGCACGTCAGAATGA TTTTAGGTGATGACAAGCTCACTGCTACCGTACAGATGTTATTTCCCTTGTACGGTGCTTGAGTCA CTGAAGTATCGGTGACGCCA CTCGATTGT TAGCATGTAATAAAGCTTAGAATTGTTATGGAC AGAAGCCAATCTCTTTGTTATGAGGGCTGTTTATGTCCAGGTCTTGTATGCTATTATAATACTTATGGCTTGTGCTATGGATGGTATAATCTGTGCTCCAAACTATACAAAAAA ]
consensusID : consensus_15416#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 436 fasta sequence
[CCAATGGATCAACCGAAGGTCGCTCTGGAGATGCTGATGAGGTGGACCTCAGGAAACCTTTCCAACGCATCCTCGAGCTTCCAGAGGCTCGATTTTACCATGTGATATACACACTCTGTCCTCTTGTGACACGATCAGAGGAACATGGTTTCCCCATAAATTAGTATAAAGTGCTTAGTAGGCACGTCAGAATGATTTTAGGTGATGACAAGCTCACTGCTACCGTACAGATGTTATTTCCCTTGTACGGTGCTTGAGTCACTGAAGTATCGGTGACGCCACTCGATTGTTAGCATGTAATAAAGCTTAGAATTGTTATGGACAGAAGCCAATCTCTTTGTTATGAGGGCTGTTTATGTCCAGGTCTTGTATGCTATTATAATACTTATGGCTTGTGCTATGGATGGTATAATCTGTGCTCCNAAAAAAAAAAAAA]
[+] EMBL AU173377 [CCAATGGATCAACCGAAGGTCGCTCTGGAGATGCTGATGAGGTGGACCTCAGGAAACCTTTCCAACGCATCCTCGAGCTTCCAGAGGCTCGATTTTACCATGTGATATACACACTCTGTCCTCTTGTGACACGATCAGAGGAACATGGTTTCCCCATAAATTAGTATAAAGTGCTTAGTAGGCACGTCAGAATGATTTTAGGTGATGACAAGCTCACTGCTACCGTACAGATGTTATTTCCCTTGTACGGTGCTTGAGTCACTGAAGTATCGGTGACGCCACTCGATTGTTAGCATGTAATAAAGCTTAGAATTGTTATGGACAGAAGCCAATCTCTTTGTTATGAGGGCTGTTTATGTCCAGGTCTTGTATGCTATTATAATACTTATGGCTTGTGCTATGGATGGTATAATCTGTGCTCCNAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_15416#0 CTCTCACTCCCCTCGGTTGGTTCGCTCGCTCCCCGGGATTATCAGCCATGGGGCCCACCC 60
consensus_15416#1 ------------------------------------------------------------
consensus_15416#0 GTCAGTCTCACTCCCTCCTCCTCACCTTCCTCCTCGTCGGCGCCGCCGCCGCCGCCGCCG 120
consensus_15416#1 ------------------------------------------------------------
consensus_15416#0 CGGCCTCGCCGGAGGACGGGAGCCCCTTCCTCCGCCTCCCCACCGCCTCGGACCTCCCCG 180
consensus_15416#1 ------------------------------------------------------------
consensus_15416#0 TCCCCGCCGGGCAGCTCCCCCGCTCCGCCGCCGTCGGCCTCATCCGCGCCCTCAACCTCC 240
consensus_15416#1 ------------------------------------------------------------
consensus_15416#0 ACCCGCGCGACGCCTCCCCCTCCCCCTCCAGCCGCGGTGATGGCGACGTCCCCGCCGGAA 300
consensus_15416#1 ------------------------------------------------------------
consensus_15416#0 CCCTAGTCGAGAGGCCCATCCACCTCGCCTCCATGGCCACCGGGAAGAGCGGCGGCTCGT 360
consensus_15416#1 ------------------------------------------------------------
consensus_15416#0 CGGCTGAAGACCTCGGCCACCACGCCGGGTACTACCGCCTCCCCAACACCCACGACGCAA 420
consensus_15416#1 ------------------------------------------------------------
consensus_15416#0 GGCTGTTCTACTTCTTCTTCGAGTCGAGGGGGAGCAAGGGGGAGGACGACCCCGTGGTGA 480
consensus_15416#1 ------------------------------------------------------------
consensus_15416#0 TCTGGCTGACGGGGGGCCCCGGCTGCAGCAGCGAGCTCGCGCTCTTCTACGAGAACGGGC 540
consensus_15416#1 ------------------------------------------------------------
consensus_15416#0 CGTTCCACATCGCCGACAACATGTCTCTCGTCTGGAACGACTTTGGCTGGGATCAGGAGT 600
consensus_15416#1 ------------------------------------------------------------
consensus_15416#0 CGAATCTGATATATGTTGATCAGCCCACGGGTACTGGGTTCAGCTACAGCTCCAATCCGC 660
consensus_15416#1 ------------------------------------------------------------
consensus_15416#0 GCGACACCCGTCACGATGAAGCTGGTGTTAGCAACGACCTGTATGCCTTTCTTCAGGCCT 720
consensus_15416#1 ------------------------------------------------------------
consensus_15416#0 TCTTCACTGAGCACCCGAATTTTGCTAAAAATGATTTCTATATTACTGGGGAATCGTATG 780
consensus_15416#1 ------------------------------------------------------------
consensus_15416#0 CTGGACACTATATTCCTGCCTTTGCAAGTCGAGTGTACAAGGGGAACAAGAACAGTGAGG 840
consensus_15416#1 ------------------------------------------------------------
consensus_15416#0 GCATTCACATCAATTTGAAGGGTTTTGCTATTGGCAATGGGTTAACGGATCCAGCAATAC 900
consensus_15416#1 ------------------------------------------------------------
consensus_15416#0 AATACAAGGCATACACTGATTACTCATTGGATATGGGGTTAATTACAAAATCACAGTTTA 960
consensus_15416#1 ------------------------------------------------------------
consensus_15416#0 ACAGGATTAACAAAATTGTTCCAACTTGTGAACTTGCTATCAAGCTCTGTGGTACCTCTG 1020
consensus_15416#1 ------------------------------------------------------------
consensus_15416#0 GCACTATATCTTGCCTTGGCGCATATGTTGTCTGCAATCTAATATTCTCTTCCATCGAGA 1080
consensus_15416#1 ------------------------------------------------------------
consensus_15416#0 CAATAATTGGGAAGAAAAATTATTATGACATCAGGAAGCCATGTGTGGGGAGCCTATGCT 1140
consensus_15416#1 ------------------------------------------------------------
consensus_15416#0 ATGACCTCTCTAATATGGAGAAGTTTCTCCAATTGAAATCAGTCAGAGAGAGCCTAGGTG 1200
consensus_15416#1 ------------------------------------------------------------
consensus_15416#0 TTGGAGACATACAGTTTGTATCATGCAGCCCAACTGTATATCAGGCCATGCTGCTAGATT 1260
consensus_15416#1 ------------------------------------------------------------
consensus_15416#0 GGATGAGGAACCTTGAAGTTGGAATCCCTGAACTCCTTGAGAATGACATCAAAGTGTTGA 1320
consensus_15416#1 ------------------------------------------------------------
consensus_15416#0 TTTATGCTGGAGAGTATGATCTCATATGCAACTGGTTAGGAAACTCAAGATGGGTGAATT 1380
consensus_15416#1 ------------------------------------------------------------
consensus_15416#0 CTATGGAATGGTCTGGAAAGGAGGCTTTTGTGTCCTCATCTGAGGAACCTTTCACAGTTG 1440
consensus_15416#1 ------------------------------------------------------------
consensus_15416#0 ATGGAAAAGAAGCCGGTATTCTGAAAAGCTATGGACCTTTGAGTTTCTTGAAGGTCCACG 1500
consensus_15416#1 ------------------------------------------------------------
consensus_15416#0 ATGCTGGCCACATGGTACCAATGGATCAACCGAAGGTCGCTCTGGAGATGCTGATGAGGT 1560
consensus_15416#1 -----------------CCAATGGATCAACCGAAGGTCGCTCTGGAGATGCTGATGAGGT 43
*******************************************
consensus_15416#0 GGACCTCAGGAAACCTTTCCAACGCATCCTCGAGCTTCCAGAGGCTCGATTTTACCATGT 1620
consensus_15416#1 GGACCTCAGGAAACCTTTCCAACGCATCCTCGAGCTTCCAGAGGCTCGATTTTACCATGT 103
************************************************************
consensus_15416#0 GATATACACACTCTGTCCTCTTGTGACACGATCAGAGGAACATGGTTTCCCCATAAATTA 1680
consensus_15416#1 GATATACACACTCTGTCCTCTTGTGACACGATCAGAGGAACATGGTTTCCCCATAAATTA 163
************************************************************
consensus_15416#0 GTATAAAGTGCTTAGTAGGCACGTCAGAATGATTTTAGGTGATGACAAGCTCACTGCTAC 1740
consensus_15416#1 GTATAAAGTGCTTAGTAGGCACGTCAGAATGATTTTAGGTGATGACAAGCTCACTGCTAC 223
************************************************************
consensus_15416#0 CGTACAGATGTTATTTCCCTTGTACGGTGCTTGAGTCACTGAAGTATCGGTGACGCCACT 1800
consensus_15416#1 CGTACAGATGTTATTTCCCTTGTACGGTGCTTGAGTCACTGAAGTATCGGTGACGCCACT 283
************************************************************
consensus_15416#0 CGATTGTTAGCATGTAATAAAGCTTAGAATTGTTATGGACAGAAGCCAATCTCTTTGTTA 1860
consensus_15416#1 CGATTGTTAGCATGTAATAAAGCTTAGAATTGTTATGGACAGAAGCCAATCTCTTTGTTA 343
************************************************************
consensus_15416#0 TGAGGGCTGTTTATGTCCAGGTCTTGTATGCTATTATAATACTTATGGCTTGTGCTATGG 1920
consensus_15416#1 TGAGGGCTGTTTATGTCCAGGTCTTGTATGCTATTATAATACTTATGGCTTGTGCTATGG 403
************************************************************
consensus_15416#0 ATGGTATAATCTGTGCTCCAAACTATACAGTAAATATTTTTGCGGGAATTGGGCGTTCCC 1980
consensus_15416#1 ATGGTATAATCTGTGCTCCNAAAAAAAAAAAAA--------------------------- 436
******************* ** * * * **
consensus_15416#0 AAAAAAAAAA 1990
consensus_15416#1 ----------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||