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Oryza sativa
cluster # 15513 cluster # 15513       Sequences # 22       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_15513#0 length = 2821 sequences # 18  
consensus_15513#1 length = 801 sequences # 3  
consensus_15513#2 length = 319 sequences # 1  

consensusID : consensus_15513#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 18
consensus length = 2821
fasta sequence
                              [TTGTGGAAATGCTACCACCCAGCCTGAATTTTTTGACAGTCACTGGTGAATTCTCAGAGGGCCAAATGTTGACAGCATCATATGGTTACATTGGGGGACATGAAGGCAATAGTTTATTTAGTTGGCATCTTCATGAGACTGAGGATGATGAAGGCAGTCTGGTTTCAGAGGCATCAGGTCTGCTACAATACCAAGTTACAAAGGAAGCTGTTGGAAAGTTCCTTTCTTTCAAATGCGTACCTATTAGGAATGATGGTATACTTGGTGAGCCAAGAGTTTTCACAGGAAAGGACAGAGTCACACCAGGAAGGCCAACAATACTTTCTCTTGAACTAACTGGTGAGGCCATTGAGGGGACCACAATGGTTGCCAGCAGAAGATATTGGGGAGGAGAAGAAGGGGAGACCATATTCCGTTGGATATTGACTAGTTCAGATGGATCACAAAAACAAATTGAAGGGGCTGCAAGTTCATCATACACCTTGAACTGTAATGATATTGGCTTTTACATATCTGTCTTGTGTGAGCCTGTTAGAAGTGATGGAGTTCATGGTTCTTTGGTGTCAACAGAAGAGTCTGGTCCTATCTTACCTGGACCACCTACATGCTTATCTCTTGAGTTAGCTGGCCCTATGGTTGAAGGTGGCTGTTTGACCTTTCATGCTGAGTATACAGGAGGTTTCAAGGGAGACTGCATCCAAGAATGGTTCAGATTACATTCTGATGGCAGCAAAGAGAAATTGTCTACTGATGAATGTCTAGATCTTACTCTAGACGATGTTGATTCGCGCATTGAGCTTATATTCACACCTGTACGAGATGATGGATCACAAGGGTCACCTAAGAGTGTTCTATCGGATACAATTCTACCTGGGGACCCCAAGGGTGTTGATCTTGTTCTACCAGAGTGTTTTCAAGACAATGAAATTTCTCCAATCAAAACCTACTTTGGTGGTAAGGAAGGCACTGGAAAATATACATGGTACCGAACTAAAGAGAAGCTTGACAACTTGGAGGCTGATCTGGTGGCTTCATGTTCT-GAAGTTGGAGTAAATTTGATGTACAAACCTTCGTTAGATGATGTTGGTTTCTACTTGATTCTTCACTGGGTTCCTGCACGATATGATGGAGAGATCGGTGACCCGTTGGTGGCTGTTACCAGTGACCCTGTCATGGCAGCATTTCCATCTGTTTCGGATGTTCACTTGAAGCAGAAAAGTTCATTGTTGTATAGCGGAACAGGAGTCTATTATGGTGGATATGAGGGGTCAAGCTTGTATAAGTGGTACAGGGAATCTAGTGATGGAACCAGGCATTGTATAGATGGTGCTGATTTAATTATATATGAAGTGACAGATGCAGATTATAGCCGCCGTCTACTGTTTGGGTACATTCCCGTTCGTTCTGATGGGATCATTGGAGAAGAAAGGCTCTCTGAGCCATCTGATATAATTCTCCCTGAACGACTTAAAATCGAAGCACTCTCTTTCAAGGGAAATCAGGTTGAGAGAGAGACACTGACTGTTCTTGAACAAATTCCAAGCACTGCAGTTCAACAACATCTATGGAGTAACTACAAGAAAGAGATAACATATCAATGGTTTGCTTCCAGTGGATCTGAAGTGGATCAGACTTTTGAGCCACTGGCTAACCAGTGCTCTCGCTCATACAAAGTACGTTTCGAAGATATTGGCCGATGCCTGAAATGTGAATGCTCAGTCTCTGATGTATTTGGACGATCCAGCGAATTGATATCCATTGTGACTGCTCCGATCTTACCAGGAAAACCTAAAATT-GAAAAACTGGAGATTGAAGGAAGAGGTTTCCACACTAACCTGTATGCTGTTCGGGGTACCTATTCTGGAGGCAAAGAAGGCAAGAGCAAAATCCAATGGCTCAGGTCTATGGTTGGAAGCCCAGATCTTATCTCTATACCTGGCGAAATTGGAAGAACATATGAAGCCAATGTTGATGATGTAGGTTATAGACTTGTTATCATTTATACACCTGTGAGAGAGGATGGAGTTGAGGGACAACCTATCTCTGCTTCAACGGAGCCAATTGCAGTTGAGCCTGAAATTTACAAGGAGGTGAAGCAGAAGCTTGATGATGGATCTGTCAAGTTTGAGGTTTTGTGTGACAAGGACAGAACACCAAAAAAGGCACAAGTGATGGGACATTTGGAGCGAAGAATTTTAGAAGTGAATAGGAAGAGGATCAAAGTTGTAAAGCCTGGATCCAAGGCATCATTCCCAACTACAGAAGTGCGAGGAACATATGTTCCACCCTTCCATGTTGAGCTATATCGCAACGATCAGCACCGCTTCAAGATTGTTGTTGAT-GGTGAGAGCGAAGTTGACTTGATGGTGCAAACTCGGCACATGCGAGACGTCATCATTCTGGTGATTAGAGGTCTTGCTCAAAAGTTCAACAGCACATCTCTCAACTCACTCCT-CAAGATAGAAGCATGAAGATCGAGTTGCCAACCTGATATAACTTACAGTATGAAACCGATTAGAAAAGGTTGTTCAGTATCGATTCAAGTTGTTTAGTTTGGAGGATGTGTAATATTTATAGGATTTGGAGCGTGGCAGCTTTTGTGTATGGGTGTGGTTGAGTGTGTTAAAGT-TTTTCTTTTTCTCAAATCAGGAGCGGGTTGCTCTTCTGACCCTGGTTTTCCATACTCATGAAATGTACATAGGAAAGGGAGGGTTGGTGATATGGTGTTGCATTAATATACAAGTTGTGTATGCAATTCTCATATTAGGCTATATGATTGATTGGGAAGATTTTCTGTTTTTTTTGGCTCGTAAAAAAAAGA]

[+] EMBL CB660456             [TTGTGGAAATGCTACCACCCAGCCTGAATTTTTTGACAGTCACTGGTGAATTCTCAGAGGGCCAAATGTTGACAGCATCATATGGTTACATTGGGGGACATGAAGGCAATAGTTTATTTAGTTGGCATCTTCATGAGACTGAGGATGATGAAGGCAGTCTGGTTTCAGAGGCATCAGGTCTGCTACAATACCAAGTTACAAAGGAAGCTGTTGGAAAGTTCCTTTCTTTCAAATGCGTACCTATTAGGAATGATGGTATACTTGGTGAGCCAAGAGTTTTCACAGGAAAGGACAGAGTCACACCAGGAAGGCCAACAATACTTTCTCTTGAACTAACTGGTGAGGCCATTGAGGGGACCACAATGGTTGCCAGCAGAAGATATTGGGGAGGAGAAGAAGGGGAGACCATATTCCGTTGGATATTGACTAGTTCAGATGGATCACAAAAACAAATTGAAGGGGCTGCAAGTTCATCATACACCTTGAACTGTAATGATATTGGCTTTTACATATCTGTCTTGTGTGAGCCTGTTAGAAGTGATGGAGTTCATGGTTCTTTGGTGTCAACAGAAGAGTCTGGTCCTATCTTACCTGGACCACCTACATGCTTATCTCTTGAGTTAGCTGGCCCTATGGTTGAAGGTGGCTGTTTGACCTTTCATGCTGAGTATACAGGAGGTTTCAAGGGAGACTGCATCCAAGAATGGTTCAGATTACATTCTGATGGCAGCAAAGAGAAATTGTCTACTGATGAATGTCTAGATCTTACTCTAGACGATGTTGATTCGCGCATTGAGCTTATATTCACACCTGTACGAGATGATGGATCACAAGGGTCACCTAAGAGTGTTCTATCGGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CB644730             [                                                                                                                                     TGACACTGAGGATGATGAAGGCAGTCTGGTTTCAGAGGCATCAGGTCTGCTACAATACCAAGTTACAAAGGAAGCTGTTGGAAAGTTCCTTTCTTTCAAATGCGTACCTATTAGGAATGATGGTATACTTGGTGAGCCAAGAGTTTTCACAGGAAAGGACAGAGTCACACCAGGAAGGCCAACAATACTTTCTCTTGAACTAACTGGTGAGGCCATTGAGGGGACCACAATGGTTGCCAGCAGAAGATATTGGGGAGGAGAAGAAGGGGAGACCATATTCCGTTGGATATTGACTAGTTCAGATGGATCACAAAAACAAATTGAAGGGGCTGCAAGTTCATCATACACCTTGAACTGTAATGATATTGGCTTTTACATATCTGTCTTGTGTGAGCCTGTTAGAAGTGATGGAGTTCATGGTTCTTTGGTGTCAACAGAAGAGTCTGGTCCTATCTTACCTGGACCACCTACATGCTTATCTCTTGAGTTAGCTGGCCCTATGGTTGAAGGTGGCTGTTTGACCTTTCATGCTGAGTATACAGGAGGTTTCAAGGGAGACTGCATCCAAGAATGGTTCAGATTACATTCTGATGGCAGCAAAGAGAAATTGTCTACTGATGAATGTCTAGATCTTACTCTAGACGATGTTGATTCGCGCATTGAGCTTATATTCACACCTGTACGAGATGATGGATCACAAGGGTCACCTAAGAGTGTTCTATCGGATACAATTCTACCTGNGGACCCCAAGGGTGTTGATCTTGTTCTACCAGAGTGTTTTCAAGACAATGAAATTTCTCCAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CB645330             [                                                                                                                                                                                                                                                                                                                                                                         AATGGTTGCCAGCAGAAGATATTGGGGAGGAGAAGAAGGGGAGACCATATTCCGTTGGATATTGACTAGTTCAGATGGATCACAAAAACAAATTGAAGGGGCTGCAAGTTCATCATACACCTTGAACTGTAATGATATTGGCTTTTACATATCTGTCTTGTGTGAGCCTGTTAGAAGTGATGGAGTTCATGGTTCTTTGGTGTCAACAGAAGAGTCTGGTCCTATCTTACCTGGACCACCTACATGCTTATCTCTTGAGTTAGCTGGCCCTATGGTTGAAGGTGGCTGTTTGACCTTTCATGCTGAGTATACAGGAGGTTTCAAGGGAGACTGCATCCAAGAATGGTTCAGATTACATTCTGATGGCAGCAAAGAGAAATTGTCTACTGATGAATGTCTAGATCTTACTCTAGACGATGTTGATTCGCGCATTGAGCTTATATTCACACCTGTACGAGATGATGGATCACAAGGGTCACCTAAGAGTGTTCTATCGGATACAATTCTACCTGGGGACCCCAAGGGTGTTGATCTTGTTCTACCAGAGTGTTTTCAAGACAATGAAATTTCTCCAATCAAAACCTACTTTGGTGGTAAGGAAGGCACTGGAAAATATACATGGTACCGAACTAAAGAGAAGCTTGACAACTTGGAGGCTGATCTGGTGGCTTCATGTTCT GAAGTTGGAGTAAATTTGATGTACAAACCTTCGTTAGATGATGTTGGTTTCTACTTGATTCTTCACTGGGTTCCTGCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CB635962             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TTACCTGGACCACCTACATGCTTATCTCTTGAGTTAGCTGGCCCTATGGTTGAAGGTGGCTGTTTGACCTTTCATGCTGAGTATACAGGAGGTTTCAAGGGAGACTGCATCCAAGAATGGTTCACATTACATTCTGATGGCAGCAAAGAGAAATTGTCTACTGATGAATGTCTAGATCTTACTCTAGACGATGTTGATTCGCGCATTGAGCTTATATTCACACCTGTACGAGATGATGGATCACAAGGGTCACCTAAGAGTGTTCTATCGGATACAATTCTACCTGGGGACCCCAAGGGTGTTGATCTTGTTCTACCAGAGTGTTTTCAAGACAATGAAATTTCTCCAATCAAAACCTACTTTGGTGGTAAGGAAGGCACTGGAAAATATACATGGTACCGAACTAAATAGAAGCTTGACAACTTGGAGGCTGATCTGGTGGCTTCATGTTCT GAAGTTGGAGTAAATTTGATGTACAAACCTTCGTTAGATGATGTTGGCTTCTACTTGATTCTTCACTGGGTTCCTGCACGATATGATGGAGAGATCGGTGACCCGTTGGTGGCTGTTACCAGTGACCCTGTCATGGCAGCATTTCCATCTGTTTCGGATGTTCACTTGAAGCAGAAAAGTTCATTGTTGTATAGCGGAACAGGAGTCTATTATGGTGGATATGAGGGGTCAAGCTTGTATAAGTGGTACAGGGAATCTAGTGATGGAACCAGGCATTGTATAGATGGTGCTGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CB635986             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TTACCTGGACCACCTACATGCTTATCTCTTGAGTTAGCTGGCCCTATGGTTGAAGGTGGCTGTTTGACCTTTCATGCTGAGTATACAGGAGGTTTCAAGGGAGACTGCATCCAAGAATGGTTCAGATTACATTCTGATGGCAGCAAAGAGAAATTGTCTACTGATGAATGTCTAGATCTTACTCTAGACGATGTTGATTCGCGCATTGAGCTTATATTCACACCTGTACGAGATGATGGATCACAAGGGTCACCTAAGAGTGTTCTATCGGATACAATTCTACCTGGGGACCCCAAGGGTGTTGATCTTGTTCTACCAGAGTGTTTTCAAGACAATGAAATTTCTCCAATCAAAACCTACTTTGGTGGTAAGGAAGGCACTGGAAAATATACATGGTACCGAACTAAAGAGAAGCTTGACAACTTGGAGGCTGATCTGGTGGCTTCATGTTCT GAAGTTGGAGTAAATTTGATGTACAAACCTTCGTTAGATGATGTTGGCTTCTACTTGATTCTTCACTGGGTTCCTGCACGATATGATGGAGAGATCGGTGACCCGTTGGTGGCTGTTACCAGTGACCCTGTCATGGCAGCATTTCCATCTGTTTCGGATGTTCACTTGAAGCAGAAAAGTTCATTGTTGTATAGCGGAACAGGAGTCTATTATGGTGGATATGAGGGGTCAAGCTTGTATAAGTGGTACAGGGAATCTAGTGATGGAACCAGGCATTGTATAGATGGTGCTGATTTAATTATAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CB648485             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TGACAACTTGGAGGCTGATCTGGTGGCTTCATGTTCT GAAGTTGGAGTAAATTTGATGTACAAACCTTCGTTAGATGATGTTGGTTTCTACTTGATTCTTCACTGGGTTCCTGCACGATATGATGGAGAGATCGGTGACCCGTTGGTGGCTGTTACCAGTGACCCTGTCATGGCAGCATTTCCATCTGTTTCGGATGTTCACTTGAAGCAGAAAAGTTCATTGTTGTATAGCGGAACAGGAGTCTATTATGGTGGATATGAGGGGTCAAGCTTGTATAAGTGGTACAGGGAATCTAGTGATGGAACCAGGCATTGTATAGATGGTGCTGATTTAATTATATATGAAGTGACAGATGCAGATTATAGCCGCCGTCTACTGTTTGGGTACATTCCCGTTCGTTCTGATGGGATCATTGGAGAAGAAAGGCTCTCTGAGCCATCTGATATAATTCTCCCTGAACGACTTAAAATCGAAGCACTCTCTTTCAAGGGAAATCAGGTTGAGAGAGAGACACTGACTGTTCTTGAACAAATTCCAAGCACTGCAGTTCAACAACATCTATGGAGTAACTACAAGAAAGAGATAACATATCAATGGTTTGCTTCCAGTGGATCTGAAGTGGATCAGACTTTTGAGCCACTGGCTAACCAGTGCTCTCGCTCATACAAAGTACGTTTCGAAGATATTGGCCGATGCCTGAAATGTGAATGCTCAGTCTCTGATGTATTTGGACGATCCAGCGAATTGATATCCATTGTGACTGCTCCGATCTTACCAGGAAAA CTAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CB650804             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ATGTTCTCTTAG AGGAGGAAATTTGATGTACAAACCTTCGTTAGATGATGTTGGTTTCTACTTGATTCTTCACTGGGTTCCTGCACGATATGATGGAGAGATCGGTGACCCGTTGGTGGCTGTTACCAGTGACCCTGTCATGGCAGCATTTCCATCTGTTTCGGATGTTCACTTGAAGCAGAAAAGTTCATTGTTGTATAGCGGAACAGGAGTCTATTATGGTGGATATGAGGGGTCAAGCTTGTATAAGTGGTACAGGGAATCTAGTGATGGAACCAGGCATTGTATAGATGGTGCTGATTTAATTATATATGAAGTGACAGATGCAGATTATAGCCGCCGTCTACTGTTTGGGTACATTCCCGTTCGTTCTGATGGGATCATTGGAGAAGAAAGGCTCTCTGAGCCATCTGATATAATTCTCCCTGAACGACTTAAAATCGAAGCACTCTCTTTCAAGGGAAATCAGGTTGAGAGAGAGACACTGACTGTTCTTGAACAAATTCCAAGCACTGCAGTTCAACAACATCTATGGAGTAACTACAAGAAAGAGATAACATATCAATGGTTTGCTTCCAGTGGATCTGAAGTGGATCAGACTTTTGAGCCACTGGCTAACCAGTGCTCTCGCTCATACAAAGTACGTTTCGAAGATATTGGCCGATGCCTGAAATGTGAATGCTCAGTCTCTGATGTATTTGGACGATCCAGCGAATTGATATCCATTGTGACTGCTCCGATCTTACCAGGAAAACCTAAAATTNGAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CB670904             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TGATTCTTCACTGGGTTCCTGCACGATATGATGGAGAGATCGGTGACCCGTTGGTGGCTGTTACCAGTGACCCTGTCATGGCAGCATTTCCATCTGTTTCGGATGTTCACTTGAAGCAGAAAAGTTCATTGTTGTATAGCGGAACAGGAGTCTATTATGGTGGATATGAGGGGTCAAGCTTGTATAAGTGGTACAGGGAATCTAGTGATGGAACCAGGCATTGTATAGATGGTGCTGATTTAATTATATATGAAGTGACAGATGCAGATTATAGCCGCCGTCTACTGTTTGGGTACATTCCCGTTCGTTCTGATGGGATCATTGGAGAAGAAAGGCTCTCTGAGCCATCTGATATAATTCTCCCTGAACGACTTAAAATCGAAGCACTCTCTTTCAAGGGAAATCAGGTTGAGAGAGAGACACTGACTGTTCTTGAACAAATTCCAAGCACTGCAGTTCAACAACATCTATGGAGTAACTACAAGAAAGAGATAACATATCAATGGTTTGCTTCCAGTGGATCTGAAGTGGATCAGACTTTTGAGCCACTGGCTAACCAGTGCTCTCGCTCATACAAAGTACGTTTCGAAGATATTGGCCGATGCCTGAAATGTGAATGCTCAGTCTCTGATGTATTTGGACGATCCAGCGAATTGATATCCATTGTGACTGCTCCGATCTTACCAGGAAAACCTAAAATT GAAAAACTGGAGATTGAAGGAAGAGGTTTCCACACTAACCTGTATGCTGTTCGGGGTACCTATTCTGGAGGCAAAGAAGGCAAGAGCAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL OSR15611A            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ccgcttGCAGCATTTCCATCTGTTTCGGATGTTCACTTGAAGCAGAAAAGTTCATTGTTGTATAGCGGAACAGGAGTCTATTATGGTGGATATGAGGGGTCAAGCTTGTATAAGTGGTACAGGGAATCTAGTGATGGAACCAGGCATTGTATAGATGGTGCTGATTTAATTATATATGAAGTGACAGATGCAGATTATAGCCGCCGTCTACTGTTTGGGTACATTCCCGTTCGTTCTGATGGGATCATTGGAGAAGGAAGGCTCTCTGAGCCATCTGATATAATTCTCCCTGAACGNCTTAAANTCGAAGCACTCTCTTTCAAGGGGAATCAGGNTGAGAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CB683094             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ATATCAGGGGTCAAGCTTGTATAAGTGGTACAGGGAATCTAGTGATGGAACCAGGCATTGTATAGATGGTGCTGATTTAATTATATATGAAGTGACAGATGCAGATTATAGCCGCCGTCTACTGTTTGGGTACATTCCCGTTCGTTCTGATGGGATCATTGGAGAAGAAAGGCTCTCTGAGCCATCTGATATAATTCTCCCTGAACGACTTAAAATCGAAGCACTCTCTTTCAAGGGAAATCAGGTTGAGAGAGAGACACTGACTGTTCTTGAACAAATTCCAAGCACTGCAGTTCAACAACATCTATGGAGTAACTACAAGAAAGAGATAACATATCAATGGTTTGCTTCCAGTGGATCTGAAGTGGATCAGACTTTTGAGCCACTGGCTAACCAGTGCTCTCGCTCATACAAAGTACGTTTCGAAGATATTGGCCGATGCCTGAAATGTGAATGCTCAGTCTCTGATGTATTTGGACGATCCAGCGAATTGATATCCATTGTGACTGCTCCGATCTTACCAGGAAAACCTAAAATT GAAAAACTGGAGATTGAAGGAAGAGGTTTCCACACTAACCTGTATGCTGTTCGGGGTACCTATTCTGGAGGCAAAGAAGGCAAGAGCAAAATCCAATGGCTCAGGTCTATGGTTGGAAGCCCAGATCTTATCTCTATACCTGGCGAAATTGGAAGAACATATGAAGCCAATGTTGATGATGTANGTTATAGACTTGTTATCATTTATACACCTGTGAGAGAGGATGGAGTTGAGGGACAACCTATCTCTGCTTC ACGGAGCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AK062246             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AGTGACAGATGCAGATTATAGCCGCCGTCTACTGTTTGGGTACATTCCCGTTCGTTCTGATGGGATCATTGGAGAAGAAAGGCTCTCTGAGCCATCTGATATAATTCTCCCTGAACGACTTAAAATCGAAGCACTCTCTTTCAAGGGAAATCAGGTTGAGAGAGAGACACTGACTGTTCTTGAACAAATTCCAAGCACTGCAGTTCAACAACATCTATGGAGTAACTACAAGAAAGAGATAACATATCAATGGTTTGCTTCCAGTGGATCTGAAGTGGATCAGACTTTTGAGCCACTGGCTAACCAGTGCTCTCGCTCATACAAAGTACGTTTCGAAGATATTGGCCGATGCCTGAAATGTGAATGCTCAGTCTCTGATGTATTTGGACGATCCAGCGAATTGATATCCATTGTGACTGCTCCGATCTTACCAGGAAAACCTAAAATT GAAAAACTGGAGATTGAAGGAAGAGGTTTCCACACTAACCTGTATGCTGTTCGGGGTACCTATTCTGGAGGCAAAGAAGGCAAGAGCAAAATCCAATGGCTCAGGTCTATGGTTGGAAGCCCAGATCTTATCTCTATACCTGGCGAAATTGGAAGAACATATGAAGCCAATGTTGATGATGTAGGTTATAGACTTGTTATCATTTATACACCTGTGAGAGAGGATGGAGTTGAGGGACAACCTATCTCTGCTTCAACGGAGCCAATTGCAGTTGAGCCTGAAATTTACAAGGAGGTGAAGCAGAAGCTTGATGATGGATCTGTCAAGTTTGAGGTTTTGTGTGACAAGGACAGAACACCAAAAAAGGCACAAGTGATGGGACATTTGGAGCGAAGAATTTTAGAAGTGAATAGGAAGAGGATCAAAGTTGTAAAGCCTGGATCCAAGGCATCATTCCCAACTACAGAAGTGCGAGGAACATATGTTCCACCCTTCCATGTTGAGCTATATCGCAACGATCAGCACCGCTTCAAGATTGTTGTTGAT GGTGAGAGCGAAGTTGACTTGATGGTGCAAACTCGGCACATGCGAGACGTCATCATTCTGGTGATTAGAGGTCTTGCTCAAAAGTTCAACAGCACATCTCTCAACTCACTCCT CAAGATAGAAGCATGAAGATCGAGTTGCCAACCTGATATAACTTACAGTATGAAACCGATTAGAAAAGGTTGTTCAGTATCGATTCAAGTTGTTTAGTTTGGAGGATGTGTAATATTTATAGGATTTGGAGCGTGGCAGCTTTTGTGTATGGGTGTGGTTGAGTGTGTTAAAGT TTTTCTTTTTCTCAAATCAGGAGCGGGTTGCTCTTCTGACCCTGGTTTTCCATACTCATGAAATGTACATAGGAAAGGGAGGGTTGGTGATATGGTGTTGCATTAATATACAAGTTGTGTATGCAATTCTCATATTAGGCTATATGATTGATTGGGAAGAT                               ]
[-] EMBL CB660457             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AGCCAATGTTGATGATGTAGGTTATAGACTTGTTATCATTTATACACCTGTGAGAGAGGATGGAGTTGAGGGACAACCTATCTCTGCTTCAACGGAGCCAATTGCAGTTGAGCCTGAAATTTACAAGGAGGTGAAGCAGAAGCTTGATGATGGATCTGTCAAGTTTGAGGTTTTGTGTGACAAGGACAGAACACCAAAAAAGGCACAAGTGATGGGACATTTGGAGCGAAGAATTTTAGAAGTGAATAGGAAGAGGATCAAAGTTGTAAAGCCTGGATCCAAGGCATCATTCCCAACTACAGAAGTGCGAGGAACATATGTTCCACCCTTCCATGTTGAGCTATATCGCAACGATCAGCACCGCTTCAAGATTGTTGTTGAT GGTGAGAGCGAAGTTGACTTGATGGTGCAAACTCGGCACATGCGAGACGTCATCATTCTGGTGATTAGAGGTCTTGCTCAAAAGTTCAACAGCACATCTCTCAACTCACTCCT CAAGATAGAAGCATGAAGATCGAGTTGCCAACCTGATATAACTTACAGTATGAAACCGATTAGAAAAGGTTGTTCAGTATCGATTCAAGTTGTTTAGTTTGGAGGATGTGTAATATTTATAGGATTTGGAGCGTGGCAGCTTTTGTGTATGGGTGTGGTTGAGTGTGTTAAAGT TTTTCTTTTTCTCAAATCAGGAGCGGGTTGCTCTTCTGACCCTGGTTTTCCATACTCATGAAATGTACATAGGAAAGGGAGGGTTGGTGATATGGTGTTGCATTAATATACAAGTTGTGTATGCAATTCTCATATTAGGCTATATGATTGATTGGGAAG                                 ]
[-] EMBL CB670905             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GTAGGTTATAGACTTGTTATCATTTATACACCTGTGAGAGAGGATGGAGTTGAGGGACAACCTATCTCTGCTTCAACGGAGCCAATTGCAGTTGAGCCTGAAATTTACAAGGAGGTGAAGCAGAAGCTTGATGATGGATCTGTCAAGTTTGAGGTTTTGTGTGACAAGGACAGAACACCAAAAAAGGCACAAGTGATGGGACATTTGGAGCGAAGAATTTTAGAAGTGAATAGGAAGAGGATCAAAGTTGTAAAGCCTGGATCCAAGGCATCATTCCCAACTACAGAAGTGCGAGGAACATATGTTCCACCCTTCCATGTTGAGCTATATCGCAACGATCAGCACCGCTTCAAGATTGTTGTTGAT GGTGAGAGCGAAGTTGACTTGATGGTGCAAACTCGGCACATGCGAGACGTCATCATTCTGGTGATTAGAGGTCTTGCTCAAAAGTTCAACAGCACATCTCTCAACTCACTCCT CAAGATAGAAGCATGAAGATCGAGTTGCCAACCTGATATAACTTACAGTATGAAACCGATTAGAAAAGGTTGTTCAGTATCGATTCAAGTTGTTTAGTTTGGAGGATGTGTAATATTTATAGGATTTGGAGCGTGGCAGCTTTTGTGTATGGGTGTGGTTGAGTGTGTTAAAGT TTTTCTTTTTCTCAAATCAGGAGCGGGTTGCTCTTCTGACCCTGGTTTTCCATACTCATGAAATGTACATAGGAAAGGGAGGGTTGGTGATATGGTGTTGCATTAATATACAAGTTGTGTATGCAATTCTCATAGGGGGCTATATGATTGATTGGGAAGATTTTCTGT                        ]
[-] EMBL CB645331             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TTATAGACTTGTTATCATTTATACACCTGTGAGAGAGGATGGAGTTGAGGGACAACCTATCTCTGCTTCAACGGAGCCAATTGCAGTTGAGCCTGAAATTTACAAGGAGGTGAAGCAGAAGCTTGATGATGGATCTGTCAAGTTTGAGGTTTTGTGTGACAAGGACAGAACACCAAAAAAGGCACAAGTGATGGGACATTTGGAGCGAAGAATTTTAGAAGTGAATAGGAAGAGGATCAAAGTTGTAAAGCCTGGATCCAAGGCATCATTCCCAACTACAGAAGTGCGAGGAACATATGTTCCACCCTTCCATGTTGAGCTATATCGCAACGATCAGCACCGCTTCAAGATTGTTGTTGAT GGTGAGAGCGAAGTTGACTTGATGGTGCAAACTCGGCACATGCGAGACGTCATCATTCTGGTGATTAGAGGTCTTGCTCAAAAGTTCAACAGCACATCTCTCAACTCACTCCT CAAGATAGAAGCATGAAGATCGAGTTGCCAACCTGATATAACTTACAGTATGAAACCGATTAGAAAAGGTTGTTCAGTATCGATTCAAGTTGTTTAGTTTGGAGGATGTGTAATATTTATAGGATTTGGAGCGTGGCAGCTTTTGTGTATGGGTGTGGTTGAGTGTGTTAAAGT TTTTCTTTTTCTCAAATCAGGAGCGGGTTGCTCTTCTGACCCTGGTTTTCCATACTCATGAAATGTACATAGGAAAGGGAGGGTTGGTGATATGGTGTTGCATTAATATACAAGTTGTGTATGCAATTCTCATATTAGGCTATATGATTGATTGGGAAGATTTTCTGTTTTTTTTGGCTCGTAAAAAAAAGA]
[-] EMBL CB648486             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GTTGAGCCTGAAATTTACAAGGAGGTGAAGCAGAAGCTTGATGATGGATCTGTCAAGTTTGAGGTTTTGTGTGACAAGGACAGAACACCAAAAAAGGCACAAGTGATGGGACATTTGGAGCGAAGAATTTTAGAAGTGAATAGGAAGAGGATCAAAGTTGTAAAGCCTGGATCCAAGGCATCATTCCCAACTACAGAAGTGCGAGGAACATATGTTCCACCCTTCCATGTTGAGCTATATCGCAACGATCAGCACCGCTTCAAGATTGTTGTTGAT GGTGAGAGCGAAGTTGACTTGATGGTGCAAACTCGGCACATGCGAGACGTCATCATTCTGGTGATTAGAGGTCTTGCTCAAAAGTTCAACAGCACATCTCTCAACTCACTCCT CAAGATAGAAGCATGAAGATCGAGTTGCCAACCTGATATAACTTACAGTATGAAACCGATTAGAAAAGGTTGTTCAGTATCGATTCAAGTTGTTTAGTTTGGAGGATGTGTAATATTTATAGGATTTGGAGCGTGGCAGCTTTTGTGTATGGGTGTGGTTGAGTGTGTTAAAGT TTTTCTTTTTCTCAAATCAGGAGCGGGTTGCTCTTCTGACCCTGGTTTTCCATACTCATGAAATGTACATAGGAAAGGGAGGGTTGGTGATATGGTGTTGCATTAATATACAAGTTGTGTATGCAATTCTCATATTAGGCTATATGATTGATTGGGAAGATTTTCTGTTTTTTTTGGCTCGTca        ]
[+] EMBL BI808244             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CATCATTCCCAACTACAGAAGTGCGAGGAACATATGTTCCACCCTTCCATGTTGAGCTATATCGC ACGATCAGCACCGCTTCAAGATTGTTGTTGAT GGTGAGAGCGAAGTTGACTTGATGGTGC AACTCGGCACATGCGAGACGTCATCATTCTGGTGATTAGAGGTCTTGCTCAAAAGTTCAACAGCACATCTCTCAACTCACTCCT CAAGATAGAAGCATGAAGATCGAGTTGCCAACCTGATATAACTTACAGTATGAAACCGATTAGAAAAGGTTGTTCAGTATCGATTCAAGTTGTTTAGTTTGGAGGATGTGTAATATTTATAGGATTTGGAGCGTGGCAGCTTTTGTGTATGGGTGTGGTTGAGTGTGTTAAAGT TTTTCTTTTTCTCAAATCAGGAGCGGGTTGCTCTTCTGACCCTGGTTTTCCATACTCATGAAATGTACATAGGAAAGGGAGGGTTGGTGATATGGTGTTGCATTAATAaaaa                                                                                ]
[+] EMBL BQ907998             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CTACAGAAGTGCGAGGAACATATGTTCCACCCTTCCATGTTGAGCTATATCGCAACGATCAGCACCGCTTCAAGATTGTTGTTGAT GGTGAGAGCGAAGTTGACTTGATGGTGCAAACTCGGCACATGCGAGACGTCATCATTCTGGTGATTAGAGGTCTTGCTCAAAAGTTCAACAGCACATCTCTCAACTCACTCCT CAAGATAGAAGCATGAAGATCGAGTTGCCAACCTGATATAACTTACAGTATGAAACCGATTAGAAAAGGTTGTTCAGTATCGATTCAAGTTGTTTAGTTTGGAGGATGTGTAATATTTATAGGATTTGGAGCGTGGCAGCTTTTGTGTATGGGTGTGGTTGAGTGTGTTAAAGTNTTTTCTTTTTCTCAAATCAGGAGCGGGTTGCTCTTCTGACCCTGGTTTTCCATACTCATGAAATGTACATAGGAAAGGGAGGGTTGGTGATATGGTGTTGCATTAATATACAAGTTGTGTATGCAATTCTCATATTAGGCTATATGATTGATTGGGAAGATTTTCTGTTaaaaa                  ]
[+] EMBL AU031765             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GATTGTTGTTNATGGGTGAGANCGAAGTTGACTTGATGGTNCAAACTCGGCACATGCGAGACGTCATCATTCTGGTNATTAGAGGTCTTNCTCAAAAGTTCAACAGCACATCTCTCAACTCACTCCTNCAAGATAGAANCATGAAGACCGAGTTNCCAACCTGATATAACTTACAGTATGAAACCGATTAGAAAAGGTTGTTCAGTATCGATTCAAGTTGTTTAGTTTGGAGGATGTGTAATATTTATAGGATTTGGAGCGTGGCAGCTTTTGTGTATGGGTGTGGTTGAGTGTGTTAAAG  TTTTCCTTTTCTCAAATCAGGAGCGGGTTGCTCTTCTGACCCTGGTTTTCCATACTCATGAAATGTACATAGGAAAGGGAGGGTTGGTGATATGGTGTTGCATTAATATACAAGTTGTGTATGCAATTCTCATATTAGGCTATATGATTGATTGGGAAGATTTTCTGTTaaaaaa                 ]


>consensus_15513#0 TTGTGGAAATGCTACCACCCAGCCTGAATTTTTTGACAGTCACTGGTGAATTCTCAGAGG GCCAAATGTTGACAGCATCATATGGTTACATTGGGGGACATGAAGGCAATAGTTTATTTA GTTGGCATCTTCATGAGACTGAGGATGATGAAGGCAGTCTGGTTTCAGAGGCATCAGGTC TGCTACAATACCAAGTTACAAAGGAAGCTGTTGGAAAGTTCCTTTCTTTCAAATGCGTAC CTATTAGGAATGATGGTATACTTGGTGAGCCAAGAGTTTTCACAGGAAAGGACAGAGTCA CACCAGGAAGGCCAACAATACTTTCTCTTGAACTAACTGGTGAGGCCATTGAGGGGACCA CAATGGTTGCCAGCAGAAGATATTGGGGAGGAGAAGAAGGGGAGACCATATTCCGTTGGA TATTGACTAGTTCAGATGGATCACAAAAACAAATTGAAGGGGCTGCAAGTTCATCATACA CCTTGAACTGTAATGATATTGGCTTTTACATATCTGTCTTGTGTGAGCCTGTTAGAAGTG ATGGAGTTCATGGTTCTTTGGTGTCAACAGAAGAGTCTGGTCCTATCTTACCTGGACCAC CTACATGCTTATCTCTTGAGTTAGCTGGCCCTATGGTTGAAGGTGGCTGTTTGACCTTTC ATGCTGAGTATACAGGAGGTTTCAAGGGAGACTGCATCCAAGAATGGTTCAGATTACATT CTGATGGCAGCAAAGAGAAATTGTCTACTGATGAATGTCTAGATCTTACTCTAGACGATG TTGATTCGCGCATTGAGCTTATATTCACACCTGTACGAGATGATGGATCACAAGGGTCAC CTAAGAGTGTTCTATCGGATACAATTCTACCTGGGGACCCCAAGGGTGTTGATCTTGTTC TACCAGAGTGTTTTCAAGACAATGAAATTTCTCCAATCAAAACCTACTTTGGTGGTAAGG AAGGCACTGGAAAATATACATGGTACCGAACTAAAGAGAAGCTTGACAACTTGGAGGCTG ATCTGGTGGCTTCATGTTCTGAAGTTGGAGTAAATTTGATGTACAAACCTTCGTTAGATG ATGTTGGTTTCTACTTGATTCTTCACTGGGTTCCTGCACGATATGATGGAGAGATCGGTG ACCCGTTGGTGGCTGTTACCAGTGACCCTGTCATGGCAGCATTTCCATCTGTTTCGGATG TTCACTTGAAGCAGAAAAGTTCATTGTTGTATAGCGGAACAGGAGTCTATTATGGTGGAT ATGAGGGGTCAAGCTTGTATAAGTGGTACAGGGAATCTAGTGATGGAACCAGGCATTGTA TAGATGGTGCTGATTTAATTATATATGAAGTGACAGATGCAGATTATAGCCGCCGTCTAC TGTTTGGGTACATTCCCGTTCGTTCTGATGGGATCATTGGAGAAGAAAGGCTCTCTGAGC CATCTGATATAATTCTCCCTGAACGACTTAAAATCGAAGCACTCTCTTTCAAGGGAAATC AGGTTGAGAGAGAGACACTGACTGTTCTTGAACAAATTCCAAGCACTGCAGTTCAACAAC ATCTATGGAGTAACTACAAGAAAGAGATAACATATCAATGGTTTGCTTCCAGTGGATCTG AAGTGGATCAGACTTTTGAGCCACTGGCTAACCAGTGCTCTCGCTCATACAAAGTACGTT TCGAAGATATTGGCCGATGCCTGAAATGTGAATGCTCAGTCTCTGATGTATTTGGACGAT CCAGCGAATTGATATCCATTGTGACTGCTCCGATCTTACCAGGAAAACCTAAAATTGAAA AACTGGAGATTGAAGGAAGAGGTTTCCACACTAACCTGTATGCTGTTCGGGGTACCTATT CTGGAGGCAAAGAAGGCAAGAGCAAAATCCAATGGCTCAGGTCTATGGTTGGAAGCCCAG ATCTTATCTCTATACCTGGCGAAATTGGAAGAACATATGAAGCCAATGTTGATGATGTAG GTTATAGACTTGTTATCATTTATACACCTGTGAGAGAGGATGGAGTTGAGGGACAACCTA TCTCTGCTTCAACGGAGCCAATTGCAGTTGAGCCTGAAATTTACAAGGAGGTGAAGCAGA AGCTTGATGATGGATCTGTCAAGTTTGAGGTTTTGTGTGACAAGGACAGAACACCAAAAA AGGCACAAGTGATGGGACATTTGGAGCGAAGAATTTTAGAAGTGAATAGGAAGAGGATCA AAGTTGTAAAGCCTGGATCCAAGGCATCATTCCCAACTACAGAAGTGCGAGGAACATATG TTCCACCCTTCCATGTTGAGCTATATCGCAACGATCAGCACCGCTTCAAGATTGTTGTTG ATGGTGAGAGCGAAGTTGACTTGATGGTGCAAACTCGGCACATGCGAGACGTCATCATTC TGGTGATTAGAGGTCTTGCTCAAAAGTTCAACAGCACATCTCTCAACTCACTCCTCAAGA TAGAAGCATGAAGATCGAGTTGCCAACCTGATATAACTTACAGTATGAAACCGATTAGAA AAGGTTGTTCAGTATCGATTCAAGTTGTTTAGTTTGGAGGATGTGTAATATTTATAGGAT TTGGAGCGTGGCAGCTTTTGTGTATGGGTGTGGTTGAGTGTGTTAAAGTTTTTCTTTTTC TCAAATCAGGAGCGGGTTGCTCTTCTGACCCTGGTTTTCCATACTCATGAAATGTACATA GGAAAGGGAGGGTTGGTGATATGGTGTTGCATTAATATACAAGTTGTGTATGCAATTCTC ATATTAGGCTATATGATTGATTGGGAAGATTTTCTGTTTTTTTTGGCTCGTAAAAAAAAG A



consensusID : consensus_15513#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 801
fasta sequence
                              [GATGTAGGTTATAGACTTGTTATCATTTATACACCTGTGAGAGAGGATGGAGTTGAGGGACAACCTATCTCTGCTTCAACGGAGCCAATTGCAGTTGAGCCTGAAATTTACAAGGAGGTGAAGCAGAAGCTTGATGATGGATCTGTCAAGTTTGAGGTTTTGTGTGACAAGGACAGAACACCAAAAAAGGCACAAGTGATGGGACATTTGGAGCGAAGAATTTTAGAAGTGAATAGGAAGAGGATCAAAGTTGTAAAGCCTGGATCCAAGGCATCATTCCCAACTACAGAAGTGCGAGGAACATATGTTCCACCCTTCCATGTTGAGCTATATCGCAACGATCAGCACCGCTTCAAGATTGTTGTTGATGGTGAGAGCGAAGTTGACTTGATGGTGCAAACTCGGCACATGCGAGACGTCATCATTCTGGTGATTAGAGGTCTTGCTCAAAAGTTCAACAGCACATCTCTCAACTCACTCCTCAAGATAGAAGCATGAAGATCGAGTTGCCACCCTGATATAACTTACAGTATGAAACCGATTAGAAAAGGTTGTTCAGTATCGATTCGAGTTGTTTAGTTTGGAGGATGTGTAATATTTATAGGATTTGGAGCGTGGCAGCTTTTGTGTATGGGTGTGGTTGAGTGTGTTAAAGTTTTTCTTTTTCTCAAATCAGGAGCGGGTTGCTCTTCTGACCCTGGTTTTCCATACTCATGAAATGTACATAGGAAAGGGAGGGTTGGTGATATGGTGTTGCAGTAATATACAAGTTGTGTATGCAATTCTCAAAAAAAAAAAAGA]

[-] EMBL CB635963             [GATGTAGGTTATAGACTTGTTATCATTTATACACCTGTGAGAGAGGATGGAGTTGAGGGACAACCTATCTCTGCTTCAACGGAGCCAATTGCAGTTGAGCCTGAAATTTACAAGGAGGTGAAGCAGAAGCTTGATGATGGATCTGTCAAGTTTGAGGTTTTGTGTGACAAGGACAGAACACCAAAAAAGGCACAAGTGATGGGACATTTGGAGCGAAGAATTTTAGAAGTGAATAGGAAGAGGATCAAAGTTGTAAAGCCTGGATCCAAGGCATCATTCCCAACTACAGAAGTGCGAGGAACATATGTTCCACCCTTCCATGTTGAGCTATATCGCAACGATCAGCACCGCTTCAAGATTGTTGTTGATGGTGAGAGCGAAGTTGACTTGATGGTGCAAACTCGGCACATGCGAGACGTCATCATTCTGGTGATTAGAGGTCTTGCTCAAAAGTTCAACAGCACATCTCTCAACTCACTCCTCAAGATAGAAGCATGAAGATCGAGTTGCCACCCTGATATAACTTACAGTATGAAACCGATTAGAAAAGGTTGTTCAGTATCGATTCGAGTTGTTTAGTTTGGAGGATGTGTAATATTTATAGGATTTGGAGCGTGGCAGCTTTTGTGTATGGGTGTGGTTGAGTGTGTTAAAGTTTTTCTTTTTCTCAAATCAGGAGCGGGTTGCTCTTCTGACCCTGGTTTTCCATACTCATGAAATGTACATAGGAAAGGGAGGGTTGGTGATATGGTGTTACAGTAATATACAAGTTGTGTATGCA                    ]
[-] EMBL CB635987             [   GTAGGTTATAGACTTGTTATCATTTATACACCTGTGAGAGAGGATGGAGTTGAGGGACAACCTATCTCTGCTTCAACGGAGCCAATTGCAGTTGAGCCTGAAATTTACAAGGAGGTGAAGCAGAAGCTTGATGATGGATCTGTCAAGTTTGAGGTTTTGTGTGACAAGGACAGAACACCAAAAAAGGCACAAGTGATGGGACATTTGGAGCGAAGAATTTTAGAAGTGAATAGGAAGAGGATCAAAGTTGTAAAGCCTGGATCCAAGGCATCATTCCCAACTACAGAAGTGCGAGGAACATATGTTCCACCCTTCCATGTTGAGCTATATCGCAACGATCAGCACCGCTTCAAGATTGTTGTTGATGGTGAGAGCGAAGTTGACTTGATGGTGCAAACTCGGCACATGCGAGACGTCATCATTCTGGTGATTAGAGGTCTTGCTCAAAAGTTCAACAGCACATCTCTCAACTCACTCCTCAAGATAGAAGCATGAAGATCGAGTTGCCACCCTGATATAACTTACAGTATGAAACCGATTAGAAAAGGTTGTTCAGTATCGATTCGAGTTGTTTAGTTTGGAGGATGTGTAATATTTATAGGATTTGGAGCGTGGCAGCTTTTGTGTATGGGTGTGGTTGAGTGTGTTAAAGTTTTTCTTTTTCTCAAATCAGGAGCGGGTTGCTCTTCTGACCCTGGTTTTCCATACTCATGAAATGTACATAGGAAAGGGAGGGTTGGTGATATGGTGTTGCAGTAATATACAAGTTGTGTATGCAATTCTCAAAAAAAAAAAAGA]
[-] EMBL CB644731             [                                               TGGAGTTGAGGGACAACCTATCTCTGCTTCAACGGAGCCAATTGCAGTTGAGCCTGAAATTTACAAGGAGGTGAAGCAGAAGCTTGATGATGGATCTGTCAAGTTTGAGGTTTTGTGTGACAAGGACAGAACACCAAAAAAGGCACAAGTGATGGGACATTTGGAGCGAAGAATTTTAGAAGTGAATAGGAAGAGGATCAAAGTTGTAAAGCCTGGATCCAAGGCATCATTCCCAACTACAGAAGTGCGAGGAACATATGTTCCACCCTTCCATGTTGAGCTATATCGCAACGATCAGCACCGCTTCAAGATTGTTGTTGATGGTGAGAGCGAAGTTGACTTGATGGTGCAAACTCGGCACATGCGAGACGTCATCATTCTGGTGATTAGAGGTCTTGCTCAAAAGTTCAACAGCACATCTCTCAACTCACTCCTCAAGATAGAAGCATGAAGATCGAGTTGCCACCCTGATATAACTTACAGTATGAAACCGATTAGAAAAGGTTGTTCAGTATCGATTCAAGTTGTTTAGTTTGGAGGATGTGTAATATTTATAGGATTTGGAGCGTGGCAGCTTTTGTGTATGGGTGTGGTTGAGTGTGTTAAAGTTTTTCTTTTTCTCAAATCAGGAGCGGGTTGCTCTTCTGACCCTGGTTTTCCATACTCATGAAATGTACATAGGAAAGGGAGGGTTGGTGATATGGTGTGGCATTAATATACAAGTTGTGTATGCAATTCTCAACAAAAAA     ]


>consensus_15513#1 GATGTAGGTTATAGACTTGTTATCATTTATACACCTGTGAGAGAGGATGGAGTTGAGGGA CAACCTATCTCTGCTTCAACGGAGCCAATTGCAGTTGAGCCTGAAATTTACAAGGAGGTG AAGCAGAAGCTTGATGATGGATCTGTCAAGTTTGAGGTTTTGTGTGACAAGGACAGAACA CCAAAAAAGGCACAAGTGATGGGACATTTGGAGCGAAGAATTTTAGAAGTGAATAGGAAG AGGATCAAAGTTGTAAAGCCTGGATCCAAGGCATCATTCCCAACTACAGAAGTGCGAGGA ACATATGTTCCACCCTTCCATGTTGAGCTATATCGCAACGATCAGCACCGCTTCAAGATT GTTGTTGATGGTGAGAGCGAAGTTGACTTGATGGTGCAAACTCGGCACATGCGAGACGTC ATCATTCTGGTGATTAGAGGTCTTGCTCAAAAGTTCAACAGCACATCTCTCAACTCACTC CTCAAGATAGAAGCATGAAGATCGAGTTGCCACCCTGATATAACTTACAGTATGAAACCG ATTAGAAAAGGTTGTTCAGTATCGATTCGAGTTGTTTAGTTTGGAGGATGTGTAATATTT ATAGGATTTGGAGCGTGGCAGCTTTTGTGTATGGGTGTGGTTGAGTGTGTTAAAGTTTTT CTTTTTCTCAAATCAGGAGCGGGTTGCTCTTCTGACCCTGGTTTTCCATACTCATGAAAT GTACATAGGAAAGGGAGGGTTGGTGATATGGTGTTGCAGTAATATACAAGTTGTGTATGC AATTCTCAAAAAAAAAAAAGA



consensusID : consensus_15513#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 319
fasta sequence
                              [GTTTATATAGTTGGCATCTTCATGAGACTGAGGATGATGAAGCAGTCTGGTTTCAGAGGCATCAGGTCTGCTACAATACCAAGTTACAAAGGAACTGTTGGAAAGTTCCTTTCTTTCAATGCATACCTATTAGGAATGATGGTATACTTGGTGAGCCAGAGTTTTCACAGGAAAGGACAGAGTCACACAGGAAGCCACATACTTTCTCTTGAACTAACTGGTGAGCCTTGAGGGACCACATGTTTCCACCAGAAGATATTGGGGAGAAGAAGAAGGGAGACATATTCCCTTGGATATGACTAGTCAGATGATCACCAAA]

[+] EMBL BQ907668             [GTTTATATAGTTGGCATCTTCATGAGACTGAGGATGATGAAGCAGTCTGGTTTCAGAGGCATCAGGTCTGCTACAATACCAAGTTACAAAGGAACTGTTGGAAAGTTCCTTTCTTTCAATGCATACCTATTAGGAATGATGGTATACTTGGTGAGCCAGAGTTTTCACAGGAAAGGACAGAGTCACACAGGAAGCCACATACTTTCTCTTGAACTAACTGGTGAGCCTTGAGGGACCACATGTTTCCACCAGAAGATATTGGGGAGAAGAAGAAGGGAGACATATTCCCTTGGATATGACTAGTCAGATGATCACCAAA]


>consensus_15513#2 GTTTATATAGTTGGCATCTTCATGAGACTGAGGATGATGAAGCAGTCTGGTTTCAGAGGC ATCAGGTCTGCTACAATACCAAGTTACAAAGGAACTGTTGGAAAGTTCCTTTCTTTCAAT GCATACCTATTAGGAATGATGGTATACTTGGTGAGCCAGAGTTTTCACAGGAAAGGACAG AGTCACACAGGAAGCCACATACTTTCTCTTGAACTAACTGGTGAGCCTTGAGGGACCACA TGTTTCCACCAGAAGATATTGGGGAGAAGAAGAAGGGAGACATATTCCCTTGGATATGAC TAGTCAGATGATCACCAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_15513#0      TTGTGGAAATGCTACCACCCAGCCTGAATTTTTTGACAGTCACTGGTGAATTCTCAGAGG 60
consensus_15513#1      ------------------------------------------------------------
consensus_15513#2      ------------------------------------------------------------
                                                                                   

consensus_15513#0      GCCAAATGTTGACAGCATCATATGGTTACATTGGGGGACATGAAGGCAATAGTTTATTTA 120
consensus_15513#1      ------------------------------------------------------------
consensus_15513#2      ------------------------------------------------------------
                                                                                   

consensus_15513#0      GTTGGCATCTTCATGAGACTGAGGATGATGAAGGCAGTCTGGTTTCAGAGGCATCAGGTC 180
consensus_15513#1      ------------------------------------------------------------
consensus_15513#2      ------------------------------------------------------------
                                                                                   

consensus_15513#0      TGCTACAATACCAAGTTACAAAGGAAGCTGTTGGAAAGTTCCTTTCTTTCAAATGCGTAC 240
consensus_15513#1      ------------------------------------------------------------
consensus_15513#2      ------------------------------------------------------------
                                                                                   

consensus_15513#0      CTATTAGGAATGATGGTATACTTGGTGAGCCAAGAGTTTTCACAGGAAAGGACAGAGTCA 300
consensus_15513#1      ------------------------------------------------------------
consensus_15513#2      ------------------------------------------------------------
                                                                                   

consensus_15513#0      CACCAGGAAGGCCAACAATACTTTCTCTTGAACTAACTGGTGAGGCCATTGAGGGGACCA 360
consensus_15513#1      ------------------------------------------------------------
consensus_15513#2      ------------------------------------------------------------
                                                                                   

consensus_15513#0      CAATGGTTGCCAGCAGAAGATATTGGGGAGGAGAAGAAGGGGAGACCATATTCCGTTGGA 420
consensus_15513#1      ------------------------------------------------------------
consensus_15513#2      ------------------------------------------------------------
                                                                                   

consensus_15513#0      TATTGACTAGTTCAGATGGATCACAAAAACAAATTGAAGGGGCTGCAAGTTCATCATACA 480
consensus_15513#1      ------------------------------------------------------------
consensus_15513#2      ------------------------------------------------------------
                                                                                   

consensus_15513#0      CCTTGAACTGTAATGATATTGGCTTTTACATATCTGTCTTGTGTGAGCCTGTTAGAAGTG 540
consensus_15513#1      ------------------------------------------------------------
consensus_15513#2      ------------------------------------------------------------
                                                                                   

consensus_15513#0      ATGGAGTTCATGGTTCTTTGGTGTCAACAGAAGAGTCTGGTCCTATCTTACCTGGACCAC 600
consensus_15513#1      ------------------------------------------------------------
consensus_15513#2      ------------------------------------------------------------
                                                                                   

consensus_15513#0      CTACATGCTTATCTCTTGAGTTAGCTGGCCCTATGGTTGAAGGTGGCTGTTTGACCTTTC 660
consensus_15513#1      ------------------------------------------------------------
consensus_15513#2      ------------------------------------------------------------
                                                                                   

consensus_15513#0      ATGCTGAGTATACAGGAGGTTTCAAGGGAGACTGCATCCAAGAATGGTTCAGATTACATT 720
consensus_15513#1      ------------------------------------------------------------
consensus_15513#2      ------------------------------------------------------------
                                                                                   

consensus_15513#0      CTGATGGCAGCAAAGAGAAATTGTCTACTGATGAATGTCTAGATCTTACTCTAGACGATG 780
consensus_15513#1      ------------------------------------------------------------
consensus_15513#2      ------------------------------------------------------------
                                                                                   

consensus_15513#0      TTGATTCGCGCATTGAGCTTATATTCACACCTGTACGAGATGATGGATCACAAGGGTCAC 840
consensus_15513#1      ------------------------------------------------------------
consensus_15513#2      ------------------------------------------------------------
                                                                                   

consensus_15513#0      CTAAGAGTGTTCTATCGGATACAATTCTACCTGGGGACCCCAAGGGTGTTGATCTTGTTC 900
consensus_15513#1      ------------------------------------------------------------
consensus_15513#2      ------------------------------------------------------------
                                                                                   

consensus_15513#0      TACCAGAGTGTTTTCAAGACAATGAAATTTCTCCAATCAAAACCTACTTTGGTGGTAAGG 960
consensus_15513#1      ------------------------------------------------------------
consensus_15513#2      ------------------------------------------------------------
                                                                                   

consensus_15513#0      AAGGCACTGGAAAATATACATGGTACCGAACTAAAGAGAAGCTTGACAACTTGGAGGCTG 1020
consensus_15513#1      ------------------------------------------------------------
consensus_15513#2      ------------------------------------------------------------
                                                                                   

consensus_15513#0      ATCTGGTGGCTTCATGTTCTGAAGTTGGAGTAAATTTGATGTACAAACCTTCGTTAGATG 1080
consensus_15513#1      ------------------------------------------------------------
consensus_15513#2      ------------------------------------------------------------
                                                                                   

consensus_15513#0      ATGTTGGTTTCTACTTGATTCTTCACTGGGTTCCTGCACGATATGATGGAGAGATCGGTG 1140
consensus_15513#1      ------------------------------------------------------------
consensus_15513#2      ------------------------------------------------------------
                                                                                   

consensus_15513#0      ACCCGTTGGTGGCTGTTACCAGTGACCCTGTCATGGCAGCATTTCCATCTGTTTCGGATG 1200
consensus_15513#1      ------------------------------------------------------------
consensus_15513#2      ------------------------------------------------------------
                                                                                   

consensus_15513#0      TTCACTTGAAGCAGAAAAGTTCATTGTTGTATAGCGGAACAGGAGTCTATTATGGTGGAT 1260
consensus_15513#1      ------------------------------------------------------------
consensus_15513#2      ------------------------------------------------------------
                                                                                   

consensus_15513#0      ATGAGGGGTCAAGCTTGTATAAGTGGTACAGGGAATCTAGTGATGGAACCAGGCATTGTA 1320
consensus_15513#1      ------------------------------------------------------------
consensus_15513#2      ------------------------------------------------------------
                                                                                   

consensus_15513#0      TAGATGGTGCTGATTTAATTATATATGAAGTGACAGATGCAGATTATAGCCGCCGTCTAC 1380
consensus_15513#1      ------------------------------------------------------------
consensus_15513#2      ------------------------------------------------------------
                                                                                   

consensus_15513#0      TGTTTGGGTACATTCCCGTTCGTTCTGATGGGATCATTGGAGAAGAAAGGCTCTCTGAGC 1440
consensus_15513#1      ------------------------------------------------------------
consensus_15513#2      ------------------------------------------------------------
                                                                                   

consensus_15513#0      CATCTGATATAATTCTCCCTGAACGACTTAAAATCGAAGCACTCTCTTTCAAGGGAAATC 1500
consensus_15513#1      ------------------------------------------------------------
consensus_15513#2      ------------------------------------------------------------
                                                                                   

consensus_15513#0      AGGTTGAGAGAGAGACACTGACTGTTCTTGAACAAATTCCAAGCACTGCAGTTCAACAAC 1560
consensus_15513#1      ------------------------------------------------------------
consensus_15513#2      ------------------------------------------------------------
                                                                                   

consensus_15513#0      ATCTATGGAGTAACTACAAGAAAGAGATAACATATCAATGGTTTGCTTCCAGTGGATCTG 1620
consensus_15513#1      ------------------------------------------------------------
consensus_15513#2      ------------------------------------------------------------
                                                                                   

consensus_15513#0      AAGTGGATCAGACTTTTGAGCCACTGGCTAACCAGTGCTCTCGCTCATACAAAGTACGTT 1680
consensus_15513#1      ------------------------------------------------------------
consensus_15513#2      ------------------------------------------------------------
                                                                                   

consensus_15513#0      TCGAAGATATTGGCCGATGCCTGAAATGTGAATGCTCAGTCTCTGATGTATTTGGACGAT 1740
consensus_15513#1      ------------------------------------------------------------
consensus_15513#2      ------------------------------------------------------------
                                                                                   

consensus_15513#0      CCAGCGAATTGATATCCATTGTGACTGCTCCGATCTTACCAGGAAAACCTAAAATTGAAA 1800
consensus_15513#1      ------------------------------------------------------------
consensus_15513#2      ------------------------------------------------------------
                                                                                   

consensus_15513#0      AACTGGAGATTGAAGGAAGAGGTTTCCACACTAACCTGTATGCTGTTCGGGGTACCTATT 1860
consensus_15513#1      ------------------------------------------------------------
consensus_15513#2      ------------------------------------------------------------
                                                                                   

consensus_15513#0      CTGGAGGCAAAGAAGGCAAGAGCAAAATCCAATGGCTCAGGTCTATGGTTGGAAGCCCAG 1920
consensus_15513#1      ------------------------------------------------------------
consensus_15513#2      ------------------------------------------------------------
                                                                                   

consensus_15513#0      ATCTTATCTCTATACCTGGCGAAATTGGAAGAACATATGAAGCCAATGTTGATGATGTAG 1980
consensus_15513#1      -----------------------------------------------------GATGTAG 7
consensus_15513#2      ------------------------------------------------------------
                                                                                   

consensus_15513#0      GTTATAGACTTGTTATCATTTATACACCTGTGAGAGAGGATGGAGTTGAGGGACAACCTA 2040
consensus_15513#1      GTTATAGACTTGTTATCATTTATACACCTGTGAGAGAGGATGGAGTTGAGGGACAACCTA 67
consensus_15513#2      ------------------------------------------------------------
                                                                                   

consensus_15513#0      TCTCTGCTTCAACGGAGCCAATTGCAGTTGAGCCTGAAATTTACAAGGAGGTGAAGCAGA 2100
consensus_15513#1      TCTCTGCTTCAACGGAGCCAATTGCAGTTGAGCCTGAAATTTACAAGGAGGTGAAGCAGA 127
consensus_15513#2      ------------------------------------------------------------
                                                                                   

consensus_15513#0      AGCTTGATGATGGATCTGTCAAGTTTGAGGTTTTGTGTGACAAGGACAGAACACCAAAAA 2160
consensus_15513#1      AGCTTGATGATGGATCTGTCAAGTTTGAGGTTTTGTGTGACAAGGACAGAACACCAAAAA 187
consensus_15513#2      ------------------------------------------------------------
                                                                                   

consensus_15513#0      AGGCACAAGTGATGGGACATTTGGAGCGAAGAATTTTAGAAGTGAATAGGAAGAGGATCA 2220
consensus_15513#1      AGGCACAAGTGATGGGACATTTGGAGCGAAGAATTTTAGAAGTGAATAGGAAGAGGATCA 247
consensus_15513#2      ------------------GTTTATATAGTTGGCATCTTCATGAGACT--GAGGATGATGA 40
                                          ***  *  *  *   * *  * * ** *  ** ** *** *

consensus_15513#0      AAGTTGTAAAGCCTGGATCCA-AGGCATCATTCCCAACTACAGAAGTGCGAGGAACATAT 2279
consensus_15513#1      AAGTTGTAAAGCCTGGATCCA-AGGCATCATTCCCAACTACAGAAGTGCGAGGAACATAT 306
consensus_15513#2      AGC------AGTCTGGTTTCAGAGGCATCAGGTCTG-CTACAATAC--CAAGTTACAAAG 91
                       *        ** **** * ** ********   *   *****  *   * **  *** * 

consensus_15513#0      GTTCCACCCTTCCATGTTGAGCTATATCGCAACGATCAGCACCGCTTCAAGATTGTTGTT 2339
consensus_15513#1      GTTCCACCCTTCCATGTTGAGCTATATCGCAACGATCAGCACCGCTTCAAGATTGTTGTT 366
consensus_15513#2      GAACTGT-------TGGAAAGTTCCTTTCTTTCAATGCATACCTATTAGGAATGATGGTA 144
                       *  *          **   ** *   *     * **    ***  **    **  * ** 

consensus_15513#0      GATGGTGAGAGCGAAGTTGACTTGATGGTGCAAACTCGGCACATGCGAGACGTCATCATT 2399
consensus_15513#1      GATGGTGAGAGCGAAGTTGACTTGATGGTGCAAACTCGGCACATGCGAGACGTCATCATT 426
consensus_15513#2      TACTTGGTGAGCCAGA--GTTTTCACAGGAAAGGACAGAGTCACACAGGAAGCCA-CATA 201
                        *    * **** *    *  ** *  *   *     *   **  *  ** * ** *** 

consensus_15513#0      CTGGTGATTAGAGGTCTTGCTCAAAAGTTCAACAGCACATCTCTCAACTCACTCCTCAAG 2459
consensus_15513#1      CTGGTGATTAGAGGTCTTGCTCAAAAGTTCAACAGCACATCTCTCAACTCACTCCTCAAG 486
consensus_15513#2      CTTTCTCTTGAACTAACTGGTGAGCCTTGAGGGACCACATGTTTCCACCAGAAGATATTG 261
                       **     **  *     ** * *    *     * ***** * ** **       *   *

consensus_15513#0      ATAGAAGCATGAAGATCGAGTTGCCAACCTG-ATATAACTTACAGTATGAA-ACCGATTA 2517
consensus_15513#1      ATAGAAGCATGAAGATCGAGTTGCCACCCTG-ATATAACTTACAGTATGAA-ACCGATTA 544
consensus_15513#2      GGGAGAAGAAGAAGGGAGACATATTCCCTTGGATATGACTAGTCAGATGATCACCAAA-- 319
                            *  * ****   **  *     * ** **** ***      ****  *** *   

consensus_15513#0      GAAAAGGTTGTTCAGTATCGATTCAAGTTGTTTAGTTTGGAGGATGTGTAATATTTATAG 2577
consensus_15513#1      GAAAAGGTTGTTCAGTATCGATTCGAGTTGTTTAGTTTGGAGGATGTGTAATATTTATAG 604
consensus_15513#2      ------------------------------------------------------------
                                                                                   

consensus_15513#0      GATTTGGAGCGTGGCAGCTTTTGTGTATGGGTGTGGTTGAGTGTGTTAAAGTTTTTCTTT 2637
consensus_15513#1      GATTTGGAGCGTGGCAGCTTTTGTGTATGGGTGTGGTTGAGTGTGTTAAAGTTTTTCTTT 664
consensus_15513#2      ------------------------------------------------------------
                                                                                   

consensus_15513#0      TTCTCAAATCAGGAGCGGGTTGCTCTTCTGACCCTGGTTTTCCATACTCATGAAATGTAC 2697
consensus_15513#1      TTCTCAAATCAGGAGCGGGTTGCTCTTCTGACCCTGGTTTTCCATACTCATGAAATGTAC 724
consensus_15513#2      ------------------------------------------------------------
                                                                                   

consensus_15513#0      ATAGGAAAGGGAGGGTTGGTGATATGGTGTTGCATTAATATACAAGTTGTGTATGCAATT 2757
consensus_15513#1      ATAGGAAAGGGAGGGTTGGTGATATGGTGTTGCAGTAATATACAAGTTGTGTATGCAATT 784
consensus_15513#2      ------------------------------------------------------------
                                                                                   

consensus_15513#0      CTCATATTAGGCTATATGATTGATTGGGAAGATTTTCTGTTTTTTTTGGCTCGTAAAAAA 2817
consensus_15513#1      CTCAAA--AAAAAAAAAGA----------------------------------------- 801
consensus_15513#2      ------------------------------------------------------------
                                                                                   

consensus_15513#0      AAGA 2821
consensus_15513#1      ----
consensus_15513#2      ----
                           




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)