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Oryza sativa
cluster # 15727 cluster # 15727       Sequences # 24       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_15727#0 length = 977 sequences # 6  
consensus_15727#1 length = 964 sequences # 1  
consensus_15727#2 length = 910 sequences # 13  
consensus_15727#3 length = 607 sequences # 3  
consensus_15727#4 length = 443 sequences # 1  

consensusID : consensus_15727#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 977
fasta sequence
                              [ATCTCTCTCTCTACACACCCGCCTCACCCTCACCGCCACCGCCACCGACGAGCTCCGGTCGCCGCCGGCGAGA-GGCGCCGCGCGATCCCGGGAGATGCCGCCGCTCACGGGGCCCAAGTCCGGGGACGCCCTCTTCGGCAGCGTCGAGCGCGTCAACGCGGAGCTGTTCACGCTCACGTACGGGGCCATCGTCAGGCAGCTGCTCACGGATCTGGAGGAGGTCGAGGAGGTCAACAAGCAGCTTGATCAGATGGGCTACAACATTGGAACTCGGTTGGTTGACGAGTTC-TTGGCC-AAATC-AAATGTATCAA-GGTGTGTTGACTTCAA-GGAGACTGCCGA-TGTCATCGCAAAGC-TT-GGATTC-AAAATGTTC-TTGGGTGTGACTGCAACTGTCACCAATTGGGATGCTGAGGGTACAAGCTGCAGCTTTGTATTGGAGGACAATCCTCTTGTAGACTTTGTTGAACTT-CCTGATACTTGCCAAGGTCTTCAGTACTGCAATGTGCTAAGTGGAGTTATTAGGGGTGCACTGGAAATGGTGTCCATGAAGACCGAGGTTACATGGGTCCGTGATATGCTTCGTGGGGATGATGCCTACGAGATGCGAGTGAAGCTTACCAAGCAAGTCCCAGAGGAATACCCCTACAAGGATGATGACTGACTTGACAATTTCGTGGATAGTTTCTCAGTTCTCACATGCTGCCTGTTTGTTCGTCTGGATTTCCCTTCTTTTCTTTCCTATGTGACTCTGGTTCTGGATCGACTTGGCTGGACGCTACATGAGATAGCTGTGCATTATATTCTACACTTGACCTTTTCACGGCAGCATCAAGTAGGTATGGAATTAATTCACTTCATTGTCCTTAAGATTTTAACATGCTGATCAAGTATGTTATCCGCACGCTACCATCAGCAACATGGATATGCCATGTGGTCATTTGTGAGGTTTGGCTCCGAGCGGGCACGGAATTAATTCACTT]

[+] EMBL CF310682             [ATCTCTCTCTCTACACACCCGCCTCACCCTCACCGCCACCGCCACCGACGAGCTCCGTTCGCCGCCGGCGAGA GGCGCCGCGCGATCCCGGGAGATGCCGCTGCTCACGGGGCCCAAGTCCGGGGACGCCCTCTTCGGCAGCGTCGAGCGCGTCAACGCGGAGCTGTTCACGCTCACGTACGGGGCCATCGTCAGGCAGCTGCTCACGGATCTGGAGGAGGTCGAGGAGGTCAACAAGCAGCTTGATCAGATGGGCTACAACATTGGAACTCGGTTGGTTGACGAGTTC TTGGCC AAATC AAATGTATCAA GGTGTGTTGACTTCAA GGAGACTGCCGA TGTCATCGCAAAGC TT GGATTC AAAATGTTC TTGGGTGTGACTGCAACTGTCACCAATTGGGATGCTGAGGGTACAAGCTGCAGCTTTGTATTGGAGGACAATCCTCTTGTAGACTTTGTTGAACTT CCTGATACTTGCCAAGGTCTTCAGTACTGCAATGTGCTAAGTGGAGTTATTAGGGGTGCACTGGAAATGGTGTCCATGAAGACCGAGGTTACATGGGTCCGTGATATGCTTCGTGGGGATGATGCCTACGAGATGCGAGTGAAGCTTACCAAGCAAGTCCCAGAGGAATACCCCTACAGGGATGAT                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AK103200             [cTCTCTCTCTC ACACACCCGCCTCACCCTCACCGCCACCGCCACCGACGAGCTCCGGTCGCCGCCGGCGAGA GGCGCCGCGCGATCCCGGGAGATGCCGCCGCTCACGGGGCCCAAGTCCGGGGACGCCCTCTTCGGCAGCGTCGAGCGCGTCAACGCGGAGCTGTTCACGCTCACGTACGGGGCCATCGTCAGGCAGCTGCTCACGGATCTGGAGGAGGTCGAGGAGGTCAACAAGCAGCTTGATCAGATGGGCTACAACATTGGAACTCGGTTGGTTGACGAGTTC TTGGCC AAATC AAATGTATCAA GGTGTGTTGACTTCAA GGAGACTGCCGA TGTCATCGCAAAGC TT GGATTC AAAATGTTC TTGGGTGTGACTGCAACTGTCACCAATTGGGATGCTGAGGGTACAAGCTGCAGCTTTGTATTGGAGGACAATCCTCTTGTAGACTTTGTTGAACTT CCTGATACTTGCCAAGGTCTTCAGTACTGCAATGTGCTAAGTGGAGTTATTAGGGGTGCACTGGAAATGGTGTCCATGAAGACCGAGGTTACATGGGTCCGTGATATGCTTCGTGGGGATGATGCCTACGAGATGCGAGTGAAGCTTACCAAGCAAGTCCCAGAGGAATACCCCTACAAGGATGATGACTGACTTGACAATTTCGTGGATAGTTTCTCAGTTCTCACATGCTGCCTGTTTGTTCGTCTGGATTTCCCTTCTTTTCTTTCCTATGTGACTCTGGTTCTGGATCGACTTGGCTGGACGCTACATGAGATAGCTGTGCATTATATTCTACACTTGACCTTTTCACGGCAGCATCAAGTAGGTATGGAATTAATTCACTTCATTGTCCTTAAGATTTTAACATGCTGATCAAGTATGTTATCCGCACGCTACCATCAGCAACATGGATATGCCATGTGGTCATTTGTGAGGTTTGGCTCCGAGCGGGCACGGAATTAATTCACTT]
[+] EMBL AU065692             [                ACCCGCCTCACCCTCACCGCCACCGCCACCGACGAGCTCCGGTCGCCGCCGGNANNA GGCGCCGCGCGATCCCGGGAGATGCCGCCGCTCACGGGGCCCAAGTCCGGGGACGCCCTCTTCGGCAGCGTCGAGCGCGTCAACG GGAANTGTTCACGCTCACGTACGGGGCCATCGTCAGGCAG TG TCACGGATCTGGAGGAGGTCGAGGAGGTCAACAAGCAGCTTGATCAGATGGGCTACAACATTGGAACTCGGTTGGTTGACGAGTTC TTGGCC AAATC AAATGTATCAA  GTGTGTTGACTTCAA GGAGA TNCCGA TGTCATCGCAAANCTTT GGATTC  AAATG TC TTGGG GT ACTGC ACTGGTACC ATTGGGAT CTAAGGtna                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CB635374             [                                     ACCGCCCCTGACGAGCTCCGGTCGCCGCCGGCGAGA GGCGCCGCGCGATCCCGGGAGATGCCGCCGCTCACGGGGCCCAAGTCCGGGGACGCCCTCTTCGGCAGCGTCGAGCGCGTCAACGCGGAGCTGTTCACGCTCACGTACGGGGCCATCGTCAGGCAGCTGCTCACGGATCTGGAGGAGGTCGAGGAGGTCAACAAGCAGCTTGATCAGATGGGCTACAACATTGGAACTCGGTTGGTTGACGAGTTC TTGGCC AAATC AAATGTATCAA GGTGTGTTGACTTCAA GGAGACTGCCGA TGTCATCGCAAAGC TT GGATTC AAAATGTTC TTGGGTGTGACTGCAACTGTCACCAATTGGGATGCTGAGGGTACAAGCTGCAGCTTTGTATTGGAGGACAATCCTCTTGTAGACTTTGTTGAACTT CCTGATACTTGCCAAGGTCTTCAGTACTGCAATGTGCTAAGTGGAGTTATTAGGGGTGCACTGGAAATGGTGTCCATGAAGACCGAGGTTACATGGGTCCGTGATATGCTTCGTGGGGATGATGCCTACGAGATGCGAGTGAAGCTTACCAAGCAAGTCCCAGAGGAATACCCCTACAAGGATGATGACTGACTTGACAATTTCGTGGGTAGTTTCTCAGTTCTCACATGCTGCCTGTTTGTTCGTCTGGATTTCCCTTCTTTTCTTTCCTATGTGACTCTGGTTCTGGATCGACTTGGCTGGACGCTACATGAGATAGCTGTGCA                                                                                                                                                                                         ]
[+] EMBL OS1110A              [                                                  AGCTCCGGTCGCCGCCGG GAGANGGCGCCGCGCGATCCCGGGAGATGCCGCCGCTCACGGGGCCCAAGTCCGGGGACGCCCTCTTCGGCAGCGTCGAGCGCGTCAACGCGGANCTGTTCACGCTCACGTACGGGGCCATCGTCAGGCAGCTGCTCACGGATCTGGAGGAGGTCGAGGAGGTCAACAAGCAGCTTGATCAGATGGGCTACAACATTGGAACTCGGTTGGTTGACGAGTTCTTTGGCCAAAATCAAAATGTATCAAGGGTGTGTTGACTTCAAGGGAGACTGCCGATTGTCATCGNAAAGN TTGGGATTCAAAAATGTTCTTTGGGTGTGACTGCAACTGTAACCAATTGGGNTGNTGAGGGTACAAGCTGCAGn                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CF310683             [                                                                                                                                                                                                                                                                                                                                                            TCATCGCAAAGC TT GGATTC AAAATGTTC TTGGGTGTGACTGCAACTGTCACCAATTGGGATGCTGAGGGTACAAGCTGCAGCTTTGTATTGGAGGACAATCCTCTTGTAGACTTTGTTGAACTTCCCTGATACTTGCCAAGGTCTTCAGTACTGCAATGTGCTAAGTGGAGTTATTAGGGGTGCACTGGAAATGGTGTCCATGAAGACCGAGGTTACATGGGTCCGTGATATGCTTCGTGGGGATGATGCCTACGAGATGCGAGTGAAGCTTACCAAGCAAGTCCCAGAGGAATACCCCTACAAGGATGATGACTGACTTGACAATTTCGTGGATAGTTTCTCAGTTCTCACATGCTGCCTGTTTGTTCGTCTGGATTTCCCTTCTTTTCTTTCCTATGTGACTCTGGTTCTGGATCGACTTGGCTGGACGCTACATGAGATAGCTGTGCATTATATTCTACACTTGACCTTTTCACGGCAGCATCAAGTAGGTATGGAATTAATTCACTTCATTGTCCTTAAGATTTTAAaaaaa                                                                                                    ]


>consensus_15727#0 ATCTCTCTCTCTACACACCCGCCTCACCCTCACCGCCACCGCCACCGACGAGCTCCGGTC GCCGCCGGCGAGAGGCGCCGCGCGATCCCGGGAGATGCCGCCGCTCACGGGGCCCAAGTC CGGGGACGCCCTCTTCGGCAGCGTCGAGCGCGTCAACGCGGAGCTGTTCACGCTCACGTA CGGGGCCATCGTCAGGCAGCTGCTCACGGATCTGGAGGAGGTCGAGGAGGTCAACAAGCA GCTTGATCAGATGGGCTACAACATTGGAACTCGGTTGGTTGACGAGTTCTTGGCCAAATC AAATGTATCAAGGTGTGTTGACTTCAAGGAGACTGCCGATGTCATCGCAAAGCTTGGATT CAAAATGTTCTTGGGTGTGACTGCAACTGTCACCAATTGGGATGCTGAGGGTACAAGCTG CAGCTTTGTATTGGAGGACAATCCTCTTGTAGACTTTGTTGAACTTCCTGATACTTGCCA AGGTCTTCAGTACTGCAATGTGCTAAGTGGAGTTATTAGGGGTGCACTGGAAATGGTGTC CATGAAGACCGAGGTTACATGGGTCCGTGATATGCTTCGTGGGGATGATGCCTACGAGAT GCGAGTGAAGCTTACCAAGCAAGTCCCAGAGGAATACCCCTACAAGGATGATGACTGACT TGACAATTTCGTGGATAGTTTCTCAGTTCTCACATGCTGCCTGTTTGTTCGTCTGGATTT CCCTTCTTTTCTTTCCTATGTGACTCTGGTTCTGGATCGACTTGGCTGGACGCTACATGA GATAGCTGTGCATTATATTCTACACTTGACCTTTTCACGGCAGCATCAAGTAGGTATGGA ATTAATTCACTTCATTGTCCTTAAGATTTTAACATGCTGATCAAGTATGTTATCCGCACG CTACCATCAGCAACATGGATATGCCATGTGGTCATTTGTGAGGTTTGGCTCCGAGCGGGC ACGGAATTAATTCACTT



consensusID : consensus_15727#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 964
fasta sequence
                              [TCTCTCTCTCCTCCGCATCACCACCACCGCCGCCGACGAGCTCCGGTCGCCGCCGGCGAGAGGCGCCGCGCGATCCGGGAGATGCCGCCGCTCACGGGGCCCAAGTCCGGGGACGCTCTCTTCGGCAGCGTCGAGCGCGTCAACGCGGAGCTGTTCACGCTCACGTATGGGGCCATCGTGAGGCAGCTGCTCACGGATCTGGAGGAGGTCGAGGAGGTCAACAAGCAGCTTGATCAGATGGGCTACAACATTGGAACTCGGTTGGTTGATGAGTTCCTGGCCAAATCAAATGTATCAAGGTGTGTTGACTTCAAGGAGACTGCCGATGTCATTGCAAAGCTTGGATTCAAAATGTTCTTGGGTGTGACTGCAACTGTCACCAATTGGGATGCTGAGGGTACAAGCTGCAGCTTTGTATTGGAGGACAATCCTCTTGTAGATTTTGTTGAACTTCCTGATACTTGCCAAGGTCTTCAGTACTGCAATGTGCTAAGTGGAGTTATTAGGGGTGCACTGGAAATGGTGTATATGAAGACAGAGGTTACATGGGTACGTGATATGCTTCGAGGGGATGATGCCTACCAGATGCGAGTGAAGCTTACCAAGCAAGTCCCAGAGGAATACCCCTACAAGGATGATGACTGACTTGACGATATTATGGATAGTTTTTAATTTTAACTGATGCTTGTTCGTTGTTTGGTTATCCACTTTCCTTAACTTGAACTGAAATATGGATAATTTGGTTGATGCTTCTGTGATTGTGATTTGTTTGCGGCCTCTGTTTTTTTCCGCTTGTGGCGACTCAATTTCTTCTTTTGTGAATATTATGTTTTTGGGGGGGTTCTGCCCTTATAATTCTCGCCTCGTTTTCACCTTTTGGTTCATGTATTTTTATTCAGCTTATTCACTTCAGACTCTCTTATTACTTTTTAACAGATTTCTTTTCTTTATTTAGTTTTTTCTT]

[+] EMBL BE040972             [TCTCTCTCTCCTCCGCATCACCACCACCGCCGCCGACGAGCTCCGGTCGCCGCCGGCGAGAGGCGCCGCGCGATCCGGGAGATGCCGCCGCTCACGGGGCCCAAGTCCGGGGACGCTCTCTTCGGCAGCGTCGAGCGCGTCAACGCGGAGCTGTTCACGCTCACGTATGGGGCCATCGTGAGGCAGCTGCTCACGGATCTGGAGGAGGTCGAGGAGGTCAACAAGCAGCTTGATCAGATGGGCTACAACATTGGAACTCGGTTGGTTGATGAGTTCCTGGCCAAATCAAATGTATCAAGGTGTGTTGACTTCAAGGAGACTGCCGATGTCATTGCAAAGCTTGGATTCAAAATGTTCTTGGGTGTGACTGCAACTGTCACCAATTGGGATGCTGAGGGTACAAGCTGCAGCTTTGTATTGGAGGACAATCCTCTTGTAGATTTTGTTGAACTTCCTGATACTTGCCAAGGTCTTCAGTACTGCAATGTGCTAAGTGGAGTTATTAGGGGTGCACTGGAAATGGTGTATATGAAGACAGAGGTTACATGGGTACGTGATATGCTTCGAGGGGATGATGCCTACCAGATGCGAGTGAAGCTTACCAAGCAAGTCCCAGAGGAATACCCCTACAAGGATGATGACTGACTTGACGATATTATGGATAGTTTTTAATTTTAACTGATGCTTGTTCGTTGTTTGGTTATCCACTTTCCTTAACTTGAACTGAAATATGGATAATTTGGTTGATGCTTCTGTGATTGTGATTTGTTTGCGGCCTCTGTTTTTTTCCGCTTGTGGCGACTCAATTTCTTCTTTTGTGAATATTATGTTTTTGGGGGGGTTCTGCCCTTATAATTCTCGCCTCGTTTTCACCTTTTGGTTCATGTATTTTTATTCAGCTTATTCACTTCAGACTCTCTTATTACTTTTTAACAGATTTCTTTTCTTTATTTAGTTTTTTCTT]


>consensus_15727#1 TCTCTCTCTCCTCCGCATCACCACCACCGCCGCCGACGAGCTCCGGTCGCCGCCGGCGAG AGGCGCCGCGCGATCCGGGAGATGCCGCCGCTCACGGGGCCCAAGTCCGGGGACGCTCTC TTCGGCAGCGTCGAGCGCGTCAACGCGGAGCTGTTCACGCTCACGTATGGGGCCATCGTG AGGCAGCTGCTCACGGATCTGGAGGAGGTCGAGGAGGTCAACAAGCAGCTTGATCAGATG GGCTACAACATTGGAACTCGGTTGGTTGATGAGTTCCTGGCCAAATCAAATGTATCAAGG TGTGTTGACTTCAAGGAGACTGCCGATGTCATTGCAAAGCTTGGATTCAAAATGTTCTTG GGTGTGACTGCAACTGTCACCAATTGGGATGCTGAGGGTACAAGCTGCAGCTTTGTATTG GAGGACAATCCTCTTGTAGATTTTGTTGAACTTCCTGATACTTGCCAAGGTCTTCAGTAC TGCAATGTGCTAAGTGGAGTTATTAGGGGTGCACTGGAAATGGTGTATATGAAGACAGAG GTTACATGGGTACGTGATATGCTTCGAGGGGATGATGCCTACCAGATGCGAGTGAAGCTT ACCAAGCAAGTCCCAGAGGAATACCCCTACAAGGATGATGACTGACTTGACGATATTATG GATAGTTTTTAATTTTAACTGATGCTTGTTCGTTGTTTGGTTATCCACTTTCCTTAACTT GAACTGAAATATGGATAATTTGGTTGATGCTTCTGTGATTGTGATTTGTTTGCGGCCTCT GTTTTTTTCCGCTTGTGGCGACTCAATTTCTTCTTTTGTGAATATTATGTTTTTGGGGGG GTTCTGCCCTTATAATTCTCGCCTCGTTTTCACCTTTTGGTTCATGTATTTTTATTCAGC TTATTCACTTCAGACTCTCTTATTACTTTTTAACAGATTTCTTTTCTTTATTTAGTTTTT TCTT



consensusID : consensus_15727#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 13
consensus length = 910
fasta sequence
                              [CACTCCCNCGATCTCTCTCTCTCTCT--CCTCCGCATCACCACCACCGCCGCCGACGAGCTCCGGTCGCCGCCGGCGAG-AGGCGCCGCGCGATCCGGGAGATGCCGCCGCTCACGGGGCCCAAGTCCGGGGACGCTCTCTTCGGCAGCGTCGAGCGCGTCAACGCGGAGCTGTTCACGCTCACGTATGGGGCCATCGTGAGGCAGCTGCTCACGGATCTGGAGGAGGTCGAGGAGGTCAACAAGCAGCTTGATCAGATGGGCTACAACATTGGAACTCGGTTGGTTGATGAGTTCCTGGCCAAATCAAATGTATCAA-GGTGTGTTGACTTCAAGG-AGACTGCCGATGTCATTGCAAAGCTTGGATTCAAAATG-TTCTTGGGTGTGACTGCAACTGT-CACCAATTGGGATGCTGAGGGTACAAGCTGCAGCTTTGTATTGGAGGACAATCCTCTTGTAGATTTTGTTGAACTTCCTGATACTTGCCAAGGTCTTCAGTACTGCAATGTGCTAAGTGGAGTTATTAGGGGTGCACTGGAAATGGTTTCT-ATG-AAGACAGAGGTTACAT-GGGTCCGTGATAT-GCTTCGT-GGGGATGA-TGCCTACGAGATGCGAGTGAAGCTTACCAAGC-AAGTCCCAGAGGAATACCCCTACAAGGATGATGACTGACTTGAC-GATTTCGTGGATAGTTTCTCAGTTCTCACATGATGCTTGTTTGCTCGTCTGGATTTCCCTTCTTTTCTTTCCTCTGTGACTGTGATTCTGGTTCGACTTGGCTGGATGCTACATGAGATAGCTGTGCATTATATTTTACACTTGCACTTTGCACGGCAGCATGTATTGTAGAAATCTATCATAACTTCTGAATTTGTTTGCTAAGTTTGACAAAGCGTTTACGATCCAAAAAAAAAAAAAAA]

[+] EMBL AA751807             [CACTCCCNCGATCTCTCTCTCTCTCT  CCTCCGCATCACCACCACCGCCGCCGACGAGCTCCGGTCGCCGCCGGCGAG AGGCGCCGCGCGATCCGGGAGATGCCGCCGCTCACGGGGCCCAAGTCCGGGGACGCTCTCTTCGGCAGCGTCGAGCGCGTCAACGCGGAGCTGTTCACGCTCACGTATGGGGCCATCGTGAGGCAGCTGCTCACGGATCTGGAGGAGGTCGAGGAGGTCAACAAGCAGCTTGATCAGATGGGNTNNNACNTTGGAACTCGGTTGGTTGATGAGTTCCTGGCCAAATCAAATGTATCAA GGTGTGTTGACTTCAAGG AGACTGCCGATGTCATTGCAAAGCTTGGATTCAAAATG TTCTTGGGTGTGACTGCAACTGT CACCAATTGGGATGCTGAGGGTACAAGCTGCAGCTTTGTATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL C74320               [ctCTCCCCNGATCTCTCTCTCTCTCTCNCCTCCGCATCACCACCACCGCCGCCGACGAGCTCCGGTCGCCGCCGG GAGAAGGCGCCGCGCGATCCGGGAGATGCCGCCGCTCACGGGGCCCAAGTCCGGGGACGCTCTCTTCGGCAGCGTCGAGCGCGTCAACG GGA NTGTTCACNCTCACGTATGGGGCCATCGTGAGGCAGCTGCTCACGGATCTGGAGGAGGTCGANGAGGTCAACAAGCAGCTTGATCAGATGGGCTACAACATTGGAACTCGGTTGGGTGATGAGTTCCTGGCCAAATCAAATGTATCAA NGTGTGTTTACTTCAANG AGACTGCCGATGTCATTGCAAACTTTGGATTCAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CF282241             [           TCTCTCTCTCTCTCT  CCTCCGCATCACCACCACCGCCGCCGACGAGCTCCGGTCGCCGCCGGCGAG AGGCGCCGCGCGATCCGGGAGATGCCGCCGCTCACGGGGCCCAAGTCCGGGGACGCTCTCTTCGGCAGCGTCGAGCGCGTCAACGCGGAGCTGTTCACGCTCACGTATGGGGCCATCGTGAGGCAGCTGCTCACGGATCTGGAGGAGGTCGAGGAGGTCAACAAGCAGCTTGATCAGATGGGCTACAACATTGGAACTCGGTTGGTTGATGAGTTCCTGGCCAAATCAAATGTATCAA GGTGTGTTGACTTCAAGG AGACTGCCGATGTCATTGCAAAGCTTGGATTCAAAATG TTCTTGGGTGTGACTGCAACTGT CACCAATTGGGATGCTGAGGGTACAAGCTGCAGCTTTGTATTGGAGGACAATCCTCTTGTAGATTTTGTTGAACTTCCTGATACTTGCCAAGGTCTTCAGTACTGCAATGTGCTAAGTGGAGTTATTAGGGGTGCACTGGAAATGGTTTCT ATG AAGACAGAGGTTACATGGGGTCCGTG                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CA755033             [                         T  CCTCCGCATCACCACCACCGCCGCCGACGAGCTCCGGTCGCCGCCGGCGAG AGGCGCCGCGCGATCCGGGAGATGCCGCCGCTCACGGGGCCCAAGTCCGGGGACGCTCTCTTCGGCAGCGTCGAGCGCGTCAACGCGGAGCTGTTCACGCTCACGTATGGGGCCATCGTGAGGCAGCTGCTCACGGATCTGGAGGAGGTCGAGGAGGTCAACAAGCAGCTTGATCAGATGGGCTACAACATTGGAACTCGGTTGGTTGATGAGTTCCTGGCCAAATCAAATGTATCAA GGTGTGTTGACTTCAAGG AGACTGCCGATGTCATTGCAAAGCTTGGATTCAAAATG TTCTTGGGTGTGACTGCAACTGT CACCAATTGGGATGCTGAGGGTACAAGCTGCAGCTTTGTATTGGAGGACAATCCTCTTGTAGATTTTGTTGAACTTCCTGATACTTGCCAAGGTCTTCAGTACTGCAATGTGCTAAGTGGAGTTATTAGGGGTGCACTGGAAATGGTTTCT ATG AAGACAGAGGTTACAT GGGTACGTGATAT GCTTCGT GGGGATGA TGCCTACGAGATGCGAGTGAAGCTTACCAAGC AAGTCCCAGAGGAATACCCCTACAAGGATGATGACTGACTTGAC GATTTCGTGGATAGTTTCTCAGTTCTCACATGATGCTTGTTTGCTCGTCTGGATTTCCCTTCTTTTCTTTCCTCTGTGACTGTGATTCTGGTTCGACTGGGCTGGATGCTACATGAGATAGCTGTGCATTATATTTTACACTTGCACTTTGCACGGCAGCATGTATTGTAGAAATCTATCATAACTTCTGAATTTGTTTGCTAAGTTTGACAAAGCGTTTACGATCCAAAAAAAAAAAAAAA]
[-] EMBL CB665195             [                                              CGCCGCCGACGAGCTCCGGTCGCCGCCGGCGAG AGGCGCCGCGCGATCCGGGAGATGCCGCCGCTCACGGGGCCCAAGTCCGGGGACGCTCTCTTCGGCAGCGTCGAGCGCGTCAACGCGGAGCTGTTCACGCTCACGTATGGGGCCATCGTGAGGCAGCTGCTCACGGATCTGGAGGAGGTCGAGGAGGTCAACAAGCAGCTTGATCAGATGGGCTACAACATTGGAACTCGGTTGGTTGATGAGTTCCTGGCCAAATCAAATGTATCAA GGTGTGTTGACTTCAAGG AGACTGCCGATGTCATTGCAAAGCTTGGATTCAAAATG TTCTTGGGTGTGACTGCAACTGT CACCAATTGGGATGCTGAGGGTACAAGCTGCAGCTTTGTATTGGAGGACAATCCTCTTGTAGATTTTGTTGAACTTCCTGATACTTGCCAAGGTCTTCAGTACTGCAATGTGCTAAGTGGAGTTATTAGGGGTGCACTGGAAATGGTTTCT ATG AAGACAGAGGTTACAT GGGTCCGTGATAT GCTTCGT GGGGATGA TGCCTACGAGATGCGAGTGAAGCTTACCAAGC AAGTCCCAGAGGAATACCCCTACAAGGATGATGACTGACTTGAC GATTTCGTGGATAGTTTCTCAGTTCTCACATGATGCTTGTTTGCTCGTCTGGATTTCCCTTCTTTTCTTTCCTCTGTGACTGTGATTCTGGTTCGACTTGGCTGGATGCTACATGAGATAGCTGTGCATTATATTTTACACTTGCACTTTGCACGGCAGCATGTAATGTAGAAATCTATCATAACTTCTGAATTTGTTTGCT                                        ]
[+] EMBL CB662108             [                                                      ACGAGCTCCGGTCGCCGCCGGCGAG AGGCGCCGCGCGATCCGGGAGATGCCGCCGCTCACGGGGCCCAAGTCCGGGGACGCTCTCTTCGGCAGCGTCGAGCGCGTCAACGCGGAGCTGTTCACGCTCACGTATGGGGCCATCGTGAGGCAGCTGCTCACGGATCTGGAGGAGGTCGAGGAGGTCAACAAGCAGCTTGATCAGATGGGCTACAACATTGGAACTCGGTTGGTTGATGAGTTCCTGGCCAAATCAAATGTATCAA GGTGTGTTGACTTCAAGG AGACTGCCGATGTCATTGCAAAGCTTGGATTCAAAATG TTCTTGGGTGTGACTGCAACTGT CACCAATTGGGATGCTGAGGGTACAAGCTGCAGCTTTGTATTGGAGGACAATCCTCTTGTAGATTTTGTTGAACTTCCTGATACTTGCCAAGGTCTTCAGTACTGCAATGTGCTAAGTGGAGTTATTAGGGGTGCACTGGAAATGGTTTCT ATG AAGACAGAGGTTACAT GGGTCCGTGATAT GCTTCGT GGGGATGA TGCCTACGAGATGCGAGTGAAGCTTACCAAGC AAGTCCCAGAGGAATACCCCTACAAGGATGATGACTGACTTGAC GATTTCGTGGATAGTTTCTCAGTTCTCACATGATGCTTGTTTGCTCGTCTGGATTTCCCTTCTTTTCTTTCCTCTGTGACTGTGATTCTGGTTCGACTTGGCTGGATGCTACATGAGATAGCTGTGCATTATATTTTACACTTGCACTTTGCACGGCAGCATGTATTGTAGAAATCTATCATAACTTCTGAATTTGTTTGC                                         ]
[-] EMBL CB662109             [                                                                                                                                                                               CACGCTCACGTATGGGGCCATCGTGAGGCAGCTGCTCACGGATCTGGAGGAGGTCGAGGAGGTCAACAAGCAGCTTGATCAGATGGGCTACAACATTGGAACTCGGTTGGTTGATGAGTTCTTGGCCAAATCAAATGTATCAA GGTGTGTTGACTTCAAGG AGACTGCCGATGTCATTGCAAAGTTTGGATTCAAAATG TTCTTGGGTGTGAGTGCAATTGT CACCAATTGGGATGCTGAGGGTACAAGCTGCAGCTTTGTATTGGAGGCCAATCCTCTTGTAGATTTCGTTGACCTTCATGATACTTGCCAAGGTCTTCAGTACGGCAATGTGCTAAGTGGAGTTATTAGGGGTGCGTTGGAAATGGTTTCTCATG AAGACAGAGGTTCCAT GGGTCCGTGATATCGCTTCGT                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AU092839             [                                                                                                                                                                                                                                                                                                          GGCCAAATCAAATGTATCAA GGTGTGTTGACTTCAAGG AGACTGCCGATGTCATTGCAAAGCTTGGATTCAAAATG TTCTTGGGTGTGACTGCAACTGTCCACCAATTGGGATGCTGAGGGTACAAGCTGCAGCTTTGTATTGGAGGACAATCCTCTTGTAGATTTTGTTGAACTNCCTGATACTTGCCAAGGTCTTCAGTACTGCAATGTGCTAAGTGGAGTTATTAGGGGTGCACTGGAAATGGTTTCT ATG AAGACAGAGGTTACAT GGGTCCGTGATAT GCTTCGT GGGGATGA TGCCTACGAGATGCGAGTGAAGCTTACCAAGC AAGTCCCAGAGGAATACCCCTACAAGGATGATGACTGACTTGAC GATTTCGTGGATAGTTTCTCAGTTCTCACATGATGCTTGTTTGCTCGTCTGGATTTCCCTTCTTTTCTTTCCTCTGTGACTGTGATTCTGGTTCGACTTGGCTGGATGCTACATGAGATAGCTGTGCATTATATTTTACACTTGCACTTTGCACGGCAGCATGTATTGTAGAAATCTATCATAACTTCTGAATTTGTTTGCTAAGTTTGACAAAGCGTTTACGATCCAAAAA          ]
[+] EMBL C28101               [                                                                                                                                                                                                                                                                                                           GCCAAATCAAATGTATCAA GGTGTGTTGACTTCAAGG AGACTGCCGATGTCATTGCAAAGCTTGGATTCAAAATG TTCTTGGGTGTGACTGCAACTGT CACCAATTGGGATGCTGAGGGTACAAGCTGCAGCTTTGTATTGGAGGACAATCCTCTTGTAGATTTTGTTGAACTTCCTGATACTTGCCAAGGTCTTCAGTACTGCAATGTGCTAAGTGGAGTTATTAGGGGTGCACTGGAAATGGTTTCT ATG AAGACAGAGGTTACAT GGGTCCGTGATAT GCTTCGTGGGGGATGA TGCCTACGAGATGCGAGTTAAGCTTACCAAGC AAGTCCCAGAGGAATACCCCTACAAGGATGATGACTGACTTNACGGATTTCGTGGGTAGTTTCTCAGTTCTCACATGATGCTTGTTTcccgnc                                                                                                                                                                                                  ]
[+] EMBL AU088598             [                                                                                                                                                                                                                                                                                                           GCCAAATCAAATGTATCAA GGTGTGTTGACTTCAAGG AGACTGCCGATGTCATTGCAAAGCTTGGATTCAAAATG TTCTTGGGTGTGACTGCAACTGT CACCAATTGGGATGCTGAGGGTACAAGCTGCAGCTTTGTATTGGAGGACAATCCTCTTGTAGATTTTGTTGAACTTCCTGATACTTGCCAAGGTCTTCAGTACTGCAATGTGCTAAGTGGAGTTATTAGGGGTGCACTGGAAATGGTTTCT ATG AAGACAGAGGTTACAT GGGTCCGTGATAT GCTTCGT GGGGATGATTGCCTACGAGATGCGAGTGAAGCTTACCAAGCAAAGTCCCAGAGGAATACCCC                                                                                                                                                                                                                                                                           ]
[+] EMBL AU166063             [                                                                                                                                                                                                                                                                                                                      TGTACCAAGGGTGTGTTG CTTCAAGGAAGNCTGCCGATGTCATTGCAAAGCTTGGATTCAAAATGTTTCTTGGGTGTGACTGCAACTGT CACCAATTGGNATGCTGAGGGTNCAAGCTGCAGCTTTGNATTGNAGGCCAATCCTCTTGTAGATTTTGTTGAACTTCCTGATACTTGCCAAGGTCTTCAGTACTGCAATGTGCTAAGTGGAGTTATTAGGGGTGCACTGGAAATGGTTTCT ATG AAGACAGAGGTTACAT GGGTCCGTGATAT GCTTCGT GGGGATGA TGCCTACGAGATGCGAGTGAAGCTTACCAAGC AAGTCCCAGAGGAATACCCCTACAAGGATGATGACTGACTTGAC GATTTCGTGGATAGTTTCTCAGTTCTCACATGATGCTTGTTTGCTCGTCTGGATTTCCCTTCTTTTCTTTCCTCTGTGACTGTGATTCTGGTTCGACTTGGCTGGATGCTACATGAGATAGCTGTGCATTATATTTTACACTTGCACTTTGCACGGCAGCATGTATTGTAGAAATCTATCATAACTTCTGAATTTGTTTGCTAAGTTTGACAAAGCGTTTACGATCCAAAAAAAA       ]
[+] EMBL C97298               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ccATGTGCTAAATGGAGTTATTAGGGGTGCACTGGAAATGGTTTCT ATGAAAGACAGAGGTTACAT GGGTCCGTGATAT GCTTCGT GGGGATGA TGCCTACGAGATGCGAGTGAAGCTTACCAAGC AAGTCCCAGAGGAATACCCCTACAAGGATGATGACTGACTTGAC GATTTCGTGGATAGTTTCTCAGTTCTCACATGATGCTTGTTTGCTCGTCTGGATTTCCCTTCTTTTCTTTCCTCTGTGACTGTGATTCTGGTTCGACTTGGCTGGATGCTACATGAGATAGCTGTGCATTATATTTTACACTTGCACTTTGCACGGCAGCATGTATTGTAGAAATCTATCATAACTTCTGAATTTGTTTGCTAAGTTTGACAAAGCGTTTACGATCCAAAAA          ]
[-] EMBL AU225098             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CGAGTGAAGCTTACCAAGC AAGTCCCAGAGGAATACCCCTACAAGGATGATGACTGACTTGAC GATTTCGTGGATAGTTTCTCAGTTCTCACATGATGCTTGTTTGCTCGTCTGGATTTCCCTTCTTTTCTTTCCTCTGTGACTGTGATTCTGGTTCGACTTGGCTGGATGCTACATGAGATAGCTGTGCATTATATTTTACACTTGCACTTTGCACGGCAGCATGTATTGTAGAAATCTATCATAACTTCTGAATTTGagcggc                                        ]


>consensus_15727#2 CACTCCCNCGATCTCTCTCTCTCTCTCCTCCGCATCACCACCACCGCCGCCGACGAGCTC CGGTCGCCGCCGGCGAGAGGCGCCGCGCGATCCGGGAGATGCCGCCGCTCACGGGGCCCA AGTCCGGGGACGCTCTCTTCGGCAGCGTCGAGCGCGTCAACGCGGAGCTGTTCACGCTCA CGTATGGGGCCATCGTGAGGCAGCTGCTCACGGATCTGGAGGAGGTCGAGGAGGTCAACA AGCAGCTTGATCAGATGGGCTACAACATTGGAACTCGGTTGGTTGATGAGTTCCTGGCCA AATCAAATGTATCAAGGTGTGTTGACTTCAAGGAGACTGCCGATGTCATTGCAAAGCTTG GATTCAAAATGTTCTTGGGTGTGACTGCAACTGTCACCAATTGGGATGCTGAGGGTACAA GCTGCAGCTTTGTATTGGAGGACAATCCTCTTGTAGATTTTGTTGAACTTCCTGATACTT GCCAAGGTCTTCAGTACTGCAATGTGCTAAGTGGAGTTATTAGGGGTGCACTGGAAATGG TTTCTATGAAGACAGAGGTTACATGGGTCCGTGATATGCTTCGTGGGGATGATGCCTACG AGATGCGAGTGAAGCTTACCAAGCAAGTCCCAGAGGAATACCCCTACAAGGATGATGACT GACTTGACGATTTCGTGGATAGTTTCTCAGTTCTCACATGATGCTTGTTTGCTCGTCTGG ATTTCCCTTCTTTTCTTTCCTCTGTGACTGTGATTCTGGTTCGACTTGGCTGGATGCTAC ATGAGATAGCTGTGCATTATATTTTACACTTGCACTTTGCACGGCAGCATGTATTGTAGA AATCTATCATAACTTCTGAATTTGTTTGCTAAGTTTGACAAAGCGTTTACGATCCAAAAA AAAAAAAAAA



consensusID : consensus_15727#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 607
fasta sequence
                              [AGTTCTTGGCCAAATCAAATGTATCAAGGTGTCCTGACTTCAAGGAGACTGCCGATGTCATCGCAAAGCTTGGATTCAAAATGTTCTTGGGTGTGACTGCAACTGTCACCAATTGGGATGCTGAGGGTACAAGCTGCAGCTTTGTATTGGAGGACAATCCTCTTGTAGACTTTGTTGAACTTCCTGATACTTGCCAAGGTCTTCAGTACTGCAATGTGCTAAGTGGAGTTATTAGGGGTGCACTGGAAATGGTGTCCATGAAGACCGAGGTTACATGGGTCCGTGATATGCTTCGTGGGGATGATGCCTACGAGATGCGAGTGAAGCTTACCAAGCAAGTCCCAGAGGAATACCCCTACAAGGATGATGACTGACTTGACAATTTCGTGGATAGTTTCTCAGTTCTCACATGCTGCCTGTTTGTTCGTCTGGATTTCCCTTCTTTTCTTTCCTATGTGACTCTGGTTCTGGATCGACTTGGCTGGACGCTACATGAGATAGCTGTGCATTATATTCTACAAAAAA------A--AAA---AAA--A----AAAAAAAAAAAAAGGGGCGGCCGCCANCCGGGGTGGAGGCTCCAGCTTTTTGTTNCCCTTANGTGNGGGGTAAT]

[+] EMBL CB000236             [AGTTCTTGGCCAAATCAAATGTATCAAGGTGTCCTGACTTCAAGGAGACTGCCGATGTCATCGCAAAGCTTGGATTCAAAATGTTCTTGGGTGTGACTGCAACTGTCACCAATTGGGATGCTGAGGGTACAAGCTGCAGCTTTGTATTGGAGGACAATCCTCTTGTAGACTTTGTTGAACTTCCTGATACTTGCCAAGGTCTTCAGTACTGCAATGTGCTAAGTGGAGTTATTAGGGGTGCACTGGAAATGGTGTCCATGAAGACCGAGGTTACATGGGTCCGTGATATGCTTCGTGGGGATGATGCCTACGAGATGCGAGTGAAGCTTACCAAGCAAGTCCCAGAGGAATACCCCTACAAGGATGATGACTGACTTGACAATTTCGTGGATAGTTTCTCAGTTCTCACATGCTGCCTGTTTGTTCGTCTGGATTTCCCTTCTTTTCTTTCCTATGTGACTCTGGTTCTGGATCGACTTGGCTGGACGCTACATGAGATAGCTGTGCATTATATTCTACACTTGACCTTTTA  AAA   AAA  A    AAAAAAAAAA                                                                ]
[+] EMBL OSS10832A            [                                                                                                                                                                                                                                                                               TACATGGGTCCGTGATATGCTTCGTGGGGATGATGCCTACGAGATGCGAGTGAAGCTTACCAAGCAAGTCCCAGAGGAATACCCCTACAAGGATGATGACTGACTTGACAATTTCGTGGATAGTTTCTCAGTTCTCACATGCTGCCTGTTTGTTCGTCTGGATTTCCCTTCTTTTCTTTCCTATGTGACTCTGGTTCTGGATCGACTTGGCTGGACGCTACATGAGATAGCTGTGCATTATATTCTACAAAAAA      ANGAAANNNANANNANTTGAAAAAAAAAAAAAGGGGCGGCCGCCANCCGGGGTGGAGGCTCCAGCTTTTTGTTNCCCTTANGTGNGGGGTAAT]
[+] EMBL AU032585             [                                                                                                                                                                                                                                                                                 CATGGGNCCGTGATATGCTTCGTGGGGATGATGCCTACGAGATGCGAGTGAAGCTTACCAAGCAAGTCCCAGAGGAATACCCCTACAAGGATGATGACTGACTTGANAATTTCGTGGATAGTTTCTCAGTTCTCACATGCTGCCTGTTTGTTCGTCTGGATTTCCCTTCTTTTCTTTCCTATGTGACTCTGGTTCTGGATCGACTTGGCTGGACGCTACATGAGATAGCTGTGCATTATATTCTACAAAAAA      A  AAA   AAA  A    AAAAAAAAAAAAAa                                                            ]


>consensus_15727#3 AGTTCTTGGCCAAATCAAATGTATCAAGGTGTCCTGACTTCAAGGAGACTGCCGATGTCA TCGCAAAGCTTGGATTCAAAATGTTCTTGGGTGTGACTGCAACTGTCACCAATTGGGATG CTGAGGGTACAAGCTGCAGCTTTGTATTGGAGGACAATCCTCTTGTAGACTTTGTTGAAC TTCCTGATACTTGCCAAGGTCTTCAGTACTGCAATGTGCTAAGTGGAGTTATTAGGGGTG CACTGGAAATGGTGTCCATGAAGACCGAGGTTACATGGGTCCGTGATATGCTTCGTGGGG ATGATGCCTACGAGATGCGAGTGAAGCTTACCAAGCAAGTCCCAGAGGAATACCCCTACA AGGATGATGACTGACTTGACAATTTCGTGGATAGTTTCTCAGTTCTCACATGCTGCCTGT TTGTTCGTCTGGATTTCCCTTCTTTTCTTTCCTATGTGACTCTGGTTCTGGATCGACTTG GCTGGACGCTACATGAGATAGCTGTGCATTATATTCTACAAAAAAAAAAAAAAAAAAAAA AAAAAAGGGGCGGCCGCCANCCGGGGTGGAGGCTCCAGCTTTTTGTTNCCCTTANGTGNG GGGTAAT



consensusID : consensus_15727#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 443
fasta sequence
                              [GGAGGACAATCCTCTTGTAGACTTTGTTGAACTTTCCTGATACTTGCCCAAGGTCTTCCAGTACTGCAATGTGCTAAGTGGAGTTATTAGGGGTGCACTGGAAATGGTGTCCATGAAGACCGAGGTTACATGGGTCCGTGATATGCTTCGTGGGGATGATGCCTACGAGATGCGAGTGAAGCTTNCCAAGCAAGTCCCAGAGGAATACCCCTACAAGGATGATGACTGACTTGACAATTTCGTGGATAGTTTCTCAGTTCTCACATGCTGCCTGTTTGTTCGTCTGGATTTCCCTTCTTTTCTTTCCTATGTGACTCTGGTTCTGGATCGACTTGGCTGGACGCTACATGAGATAGCTGTGCATTATATTCTACACTTGACCTTTTCACGGCAGCATCAAGTAGGTATGGAATTAATTCACTTCATTGTCAAAAAAAAAAAAA]

[+] EMBL AU030396             [GGAGGACAATCCTCTTGTAGACTTTGTTGAACTTTCCTGATACTTGCCCAAGGTCTTCCAGTACTGCAATGTGCTAAGTGGAGTTATTAGGGGTGCACTGGAAATGGTGTCCATGAAGACCGAGGTTACATGGGTCCGTGATATGCTTCGTGGGGATGATGCCTACGAGATGCGAGTGAAGCTTNCCAAGCAAGTCCCAGAGGAATACCCCTACAAGGATGATGACTGACTTGACAATTTCGTGGATAGTTTCTCAGTTCTCACATGCTGCCTGTTTGTTCGTCTGGATTTCCCTTCTTTTCTTTCCTATGTGACTCTGGTTCTGGATCGACTTGGCTGGACGCTACATGAGATAGCTGTGCATTATATTCTACACTTGACCTTTTCACGGCAGCATCAAGTAGGTATGGAATTAATTCACTTCATTGTCAAAAAAAAAAAAA]


>consensus_15727#4 GGAGGACAATCCTCTTGTAGACTTTGTTGAACTTTCCTGATACTTGCCCAAGGTCTTCCA GTACTGCAATGTGCTAAGTGGAGTTATTAGGGGTGCACTGGAAATGGTGTCCATGAAGAC CGAGGTTACATGGGTCCGTGATATGCTTCGTGGGGATGATGCCTACGAGATGCGAGTGAA GCTTNCCAAGCAAGTCCCAGAGGAATACCCCTACAAGGATGATGACTGACTTGACAATTT CGTGGATAGTTTCTCAGTTCTCACATGCTGCCTGTTTGTTCGTCTGGATTTCCCTTCTTT TCTTTCCTATGTGACTCTGGTTCTGGATCGACTTGGCTGGACGCTACATGAGATAGCTGT GCATTATATTCTACACTTGACCTTTTCACGGCAGCATCAAGTAGGTATGGAATTAATTCA CTTCATTGTCAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_15727#0      -----ATCTCTCTCTCTACACACCCGCCTCACCCTCACCGCCACCGCCACCGACGAGCTC 55
consensus_15727#4      ------------------------------------------------------------
consensus_15727#3      ------------------------------------------------------------
consensus_15727#2      CACTCCCNCGATCTCTCTCTCTCTCTCCTCCGCATCACCACCACCGCCGCCGACGAGCTC 60
consensus_15727#1      -----------------TCTCTCTCTCCTCCGCATCACCACCACCGCCGCCGACGAGCTC 43
                                                                                   

consensus_15727#0      CGGTCGCCGCCGGCGAGAGGCGCCGCGCGATCCCGGGAGATGCCGCCGCTCACGGGGCCC 115
consensus_15727#4      ------------------------------------------------------------
consensus_15727#3      ------------------------------------------------------------
consensus_15727#2      CGGTCGCCGCCGGCGAGAGGCGCCGCGCGATCC-GGGAGATGCCGCCGCTCACGGGGCCC 119
consensus_15727#1      CGGTCGCCGCCGGCGAGAGGCGCCGCGCGATCC-GGGAGATGCCGCCGCTCACGGGGCCC 102
                                                                                   

consensus_15727#0      AAGTCCGGGGACGCCCTCTTCGGCAGCGTCGAGCGCGTCAACGCGGAGCTGTTCACGCTC 175
consensus_15727#4      ------------------------------------------------------------
consensus_15727#3      ------------------------------------------------------------
consensus_15727#2      AAGTCCGGGGACGCTCTCTTCGGCAGCGTCGAGCGCGTCAACGCGGAGCTGTTCACGCTC 179
consensus_15727#1      AAGTCCGGGGACGCTCTCTTCGGCAGCGTCGAGCGCGTCAACGCGGAGCTGTTCACGCTC 162
                                                                                   

consensus_15727#0      ACGTACGGGGCCATCGTCAGGCAGCTGCTCACGGATCTGGAGGAGGTCGAGGAGGTCAAC 235
consensus_15727#4      ------------------------------------------------------------
consensus_15727#3      ------------------------------------------------------------
consensus_15727#2      ACGTATGGGGCCATCGTGAGGCAGCTGCTCACGGATCTGGAGGAGGTCGAGGAGGTCAAC 239
consensus_15727#1      ACGTATGGGGCCATCGTGAGGCAGCTGCTCACGGATCTGGAGGAGGTCGAGGAGGTCAAC 222
                                                                                   

consensus_15727#0      AAGCAGCTTGATCAGATGGGCTACAACATTGGAACTCGGTTGGTTGACGAGTTCTTGGCC 295
consensus_15727#4      ------------------------------------------------------------
consensus_15727#3      -------------------------------------------------AGTTCTTGGCC 11
consensus_15727#2      AAGCAGCTTGATCAGATGGGCTACAACATTGGAACTCGGTTGGTTGATGAGTTCCTGGCC 299
consensus_15727#1      AAGCAGCTTGATCAGATGGGCTACAACATTGGAACTCGGTTGGTTGATGAGTTCCTGGCC 282
                                                                                   

consensus_15727#0      AAATCAAATGTATCAAGGTGTGTTGACTTCAAGGAGACTGCCGATGTCATCGCAAAGCTT 355
consensus_15727#4      ------------------------------------------------------------
consensus_15727#3      AAATCAAATGTATCAAGGTGTCCTGACTTCAAGGAGACTGCCGATGTCATCGCAAAGCTT 71
consensus_15727#2      AAATCAAATGTATCAAGGTGTGTTGACTTCAAGGAGACTGCCGATGTCATTGCAAAGCTT 359
consensus_15727#1      AAATCAAATGTATCAAGGTGTGTTGACTTCAAGGAGACTGCCGATGTCATTGCAAAGCTT 342
                                                                                   

consensus_15727#0      GGATTCAAAATGTTCTTGGGTGTGACTGCAACTGTCACCAATTGGGATGCTGAGGGTACA 415
consensus_15727#4      ------------------------------------------------------------
consensus_15727#3      GGATTCAAAATGTTCTTGGGTGTGACTGCAACTGTCACCAATTGGGATGCTGAGGGTACA 131
consensus_15727#2      GGATTCAAAATGTTCTTGGGTGTGACTGCAACTGTCACCAATTGGGATGCTGAGGGTACA 419
consensus_15727#1      GGATTCAAAATGTTCTTGGGTGTGACTGCAACTGTCACCAATTGGGATGCTGAGGGTACA 402
                                                                                   

consensus_15727#0      AGCTGCAGCTTTGTATTGGAGGACAATCCTCTTGTAGACTTTGTTGAACTT-CCTGATAC 474
consensus_15727#4      -----------------GGAGGACAATCCTCTTGTAGACTTTGTTGAACTTTCCTGATAC 43
consensus_15727#3      AGCTGCAGCTTTGTATTGGAGGACAATCCTCTTGTAGACTTTGTTGAACTT-CCTGATAC 190
consensus_15727#2      AGCTGCAGCTTTGTATTGGAGGACAATCCTCTTGTAGATTTTGTTGAACTT-CCTGATAC 478
consensus_15727#1      AGCTGCAGCTTTGTATTGGAGGACAATCCTCTTGTAGATTTTGTTGAACTT-CCTGATAC 461
                                        ********************* ************ ********

consensus_15727#0      TTGCC-AAGGTCTTC-AGTACTGCAATGTGCTAAGTGGAGTTATTAGGGGTGCACTGGAA 532
consensus_15727#4      TTGCCCAAGGTCTTCCAGTACTGCAATGTGCTAAGTGGAGTTATTAGGGGTGCACTGGAA 103
consensus_15727#3      TTGCC-AAGGTCTTC-AGTACTGCAATGTGCTAAGTGGAGTTATTAGGGGTGCACTGGAA 248
consensus_15727#2      TTGCC-AAGGTCTTC-AGTACTGCAATGTGCTAAGTGGAGTTATTAGGGGTGCACTGGAA 536
consensus_15727#1      TTGCC-AAGGTCTTC-AGTACTGCAATGTGCTAAGTGGAGTTATTAGGGGTGCACTGGAA 519
                       ***** ********* ********************************************

consensus_15727#0      ATGGTGTCCATGAAGACCGAGGTTACATGGGTCCGTGATATGCTTCGTGGGGATGATGCC 592
consensus_15727#4      ATGGTGTCCATGAAGACCGAGGTTACATGGGTCCGTGATATGCTTCGTGGGGATGATGCC 163
consensus_15727#3      ATGGTGTCCATGAAGACCGAGGTTACATGGGTCCGTGATATGCTTCGTGGGGATGATGCC 308
consensus_15727#2      ATGGTTTCTATGAAGACAGAGGTTACATGGGTCCGTGATATGCTTCGTGGGGATGATGCC 596
consensus_15727#1      ATGGTGTATATGAAGACAGAGGTTACATGGGTACGTGATATGCTTCGAGGGGATGATGCC 579
                       ***** *  ******** ************** ************** ************

consensus_15727#0      TACGAGATGCGAGTGAAGCTTACCAAGCAAGTCCCAGAGGAATACCCCTACAAGGATGAT 652
consensus_15727#4      TACGAGATGCGAGTGAAGCTTNCCAAGCAAGTCCCAGAGGAATACCCCTACAAGGATGAT 223
consensus_15727#3      TACGAGATGCGAGTGAAGCTTACCAAGCAAGTCCCAGAGGAATACCCCTACAAGGATGAT 368
consensus_15727#2      TACGAGATGCGAGTGAAGCTTACCAAGCAAGTCCCAGAGGAATACCCCTACAAGGATGAT 656
consensus_15727#1      TACCAGATGCGAGTGAAGCTTACCAAGCAAGTCCCAGAGGAATACCCCTACAAGGATGAT 639
                       *** ***************** **************************************

consensus_15727#0      GACTGACTTGACAATTTCGTGGATAGTTTCTCAGTTCTCACATGCTGCCTGTTTGTTCGT 712
consensus_15727#4      GACTGACTTGACAATTTCGTGGATAGTTTCTCAGTTCTCACATGCTGCCTGTTTGTTCGT 283
consensus_15727#3      GACTGACTTGACAATTTCGTGGATAGTTTCTCAGTTCTCACATGCTGCCTGTTTGTTCGT 428
consensus_15727#2      GACTGACTTGACGATTTCGTGGATAGTTTCTCAGTTCTCACATGATGCTTGTTTGCTCGT 716
consensus_15727#1      GACTGACTTGACGATATTATGGATAGTTTTT-AATTTTAAC-TGATGCTTGTTCGTT-GT 696
                       ************ ** *  ********** * * ** * ** ** *** **** * * **

consensus_15727#0      CTGGATTTCCCTTCTTTTCTTTCCTATGTGACTCTGGTTCTGGATCGACTTGGCTGGACG 772
consensus_15727#4      CTGGATTTCCCTTCTTTTCTTTCCTATGTGACTCTGGTTCTGGATCGACTTGGCTGGACG 343
consensus_15727#3      CTGGATTTCCCTTCTTTTCTTTCCTATGTGACTCTGGTTCTGGATCGACTTGGCTGGACG 488
consensus_15727#2      CTGGATTTCCCTTCTTTTCTTTCCTCTGTGACTGTGATTCTGGTTCGACTTGGCTGGATG 776
consensus_15727#1      TTGGTTATCC--ACTTTCCTTAACT---TGAACTGAAATATGGAT-AATTTGGTTG-ATG 749
                        *** * ***   **** ***  **   ***       * *** *  * **** ** * *

consensus_15727#0      CTACATGAGATAGCTGTGCATTATATTCTACACTTGACCTTTTCACGGCAGCATCAAGTA 832
consensus_15727#4      CTACATGAGATAGCTGTGCATTATATTCTACACTTGACCTTTTCACGGCAGCATCAAGTA 403
consensus_15727#3      CTACATGAGATAGCTGTGCATTATATTCTACA--AAAAAAAAAAAAAAAAAAAAAAAAAA 546
consensus_15727#2      CTACATGAGATAGCTGTGCATTATATTTTACACTTGCACTTTGCACGGCAGCAT------ 830
consensus_15727#1      CTTC-TGTGAT---TGTGATTTGTTTGCGGCCTCTGTTTTTTTC-CGCTTGTGGCGACTC 804
                       ** * ** ***   ****  ** * *    *                             

consensus_15727#0      GGTATGGAATTAATTCACTTCATTGTCCTTAAGATTTTAACATGCTGATCAAGTATGTTA 892
consensus_15727#4      GGTATGGAATTAATTCACTTCATTGTCAAAAAAAAAAAAA-------------------- 443
consensus_15727#3      GGGGCGGCCGCCANCCGGGGTGGAGGCTCCAGCTTTTTGTTNCCCTTANGTGNGGGGTAA 606
consensus_15727#2      -GTATTGTAGAAATCTATCATAACTTCTGAATTTGTTTGCTAAGTTTGACAAAGCGTTTA 889
consensus_15727#1      AATTTCTTCTTTTGTGAATATTATGTTTTTGGGGGGGTTCTGCCCTTATAATTCTCGCCT 864
                                                                                   

consensus_15727#0      TCCGCACGCTACCATCAGCAACATGGATATGCCATGTGGTCATTTGTGAGGTTTGGCTCC 952
consensus_15727#4      ------------------------------------------------------------
consensus_15727#3      T----------------------------------------------------------- 607
consensus_15727#2      CGATCCAAAAAAAAAAAAAAA--------------------------------------- 910
consensus_15727#1      CGTTTTCACCTTTTGGTTCATGTATTTTTATTCAGCTTATTCACTTCAGACTCTCTTATT 924
                                                                                   

consensus_15727#0      GAGCGGGCACGGAATTAATTCACTT--------------- 977
consensus_15727#4      ----------------------------------------
consensus_15727#3      ----------------------------------------
consensus_15727#2      ----------------------------------------
consensus_15727#1      ACTTTTTAACAGATTTCTTTTCTTTATTTAGTTTTTTCTT 964
                                                               




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)