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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15755#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 22 consensus length = 1911 fasta sequence
[GCTGTTTCGCCGCACCCATCGAAATCTCACCCGCTCTCTCTCTCTCGCGCGCGCTGCCGCCGAGGAAGTGGAGCTACGTGGTGGAGGGGGGCGCGTCCCCAGGGAAGGCCGGGAGGGTCAGCGGGAGCGGGAGGGGGAGGGGGAGGGGTGGGGCCGCGTCGCCGATGGGTGTCACCTTCAAGGCCGTGCCGCTCCAGTCGCCGCTGCCGCCCGTCGAGGAAATAATGTCCTTCATTAGGTCATATGTTGTACCTGAAGGCTTTCCGGATAGTGTCACTCCTTCATATGTCCCATACATGACATGGAGAGCATTGAAGCATTTCTTTGGTGGAGCAATGGGTGTATTCACGACAAGAACCTTGCTAAACTCTGTTGGAGTTGCCCAAAGTAGGGCAACATCTGGAGCTGTGGCTATCAACTGGATACTCAAGGATGGAGCTGGCCGAGTTGGAAAAATGCTTTTTGCCCGCCAAGGGAAGAAATTTGACTACGACCTAAAGCAGCTTCGCTTTTCTGGCGATCTCTTGATGGAGTTAGGAGCTGGGATAGAGTTAGCTACGGCAGCTTTCCCTCAACTTTTCCTACCTATGGCTTGCATCGCAAATGTTGTTAAGAATGTTGCTGCTGTTACATCAACCTCGACCCGTACACCAATCTACAAGGCATATGCAAAAGGAGAAAATATTGGAGATGTCACTGCCAAAGGAGAAAGTGTTGGGAACATTGCTGATCTGTTGGGAACTGGTTTGAGCATTTTAATTTCTAAGAGGAATCCATCATTGGTGACTTCATTTGCCTTCTTGTCTTGTGGCTATCTCCTTAGTTCATACCATGAGGTGAGATCTGTTGTGCTGAACACTCTAAACACGGCAAGATTTACTGTGGCAGTTGATTCCTTCATTAAGAGCGGACATGTTCCCTCATTGAAGGAAGGAAACTCACAGGAGACTATATTTAATCCACCATGGCGGCATCAGCCAGTTGCAATAGGATCAAGATTTGGAGAGGCATTTCAGGAACCTGCTTCTTTTGTTGCCATAAGGCCTTTGTTTGAGGATGAGAGGTACATTGTTACATATAACCCAACAAAGGACAAGGTATATGCTTTGCTCAAGGACCAAGCAAAGCCAGATGATATTCTCAAAGCCGCTTTCCATGCACATGTATTACTACATTTTATTAATGCATCACATGCTAACTTGAATGCACGGAAGCGGATGAACTCCAATCGGTCATACCAAAATGCAAACCCACTGAACATGGACTTTATACCACACATTGCTGAATCTTG-CAAGATTGTCACTTCATCATATGGAGTTTTCAAGAAGAAAGCGAGGGAACAGGGATGGATAATGTCAGAATCATTGCTTAA-CCCTGGACGAGCTCGGTTGTGTGGAATAGTACCTCAATGACCCAATAATATTCGTTTGTTATAGTTGAATGGATGGTACAATTTTTTTTCATACATCGAATTCGGGCCCTATGTGAGTCAGC-GAACTTCTTTAACTAAATCAACCATATCGAAGTGAAGTACCTGGCATGCACCGCGCGAGACA-GGATGGATGGGTACTTCAACTTTGGAGCGATGTGCAACATCA-TGGGGTATGCTGACTCATGGAAAGACGGGGAAGGAAGGAGAAACTAACCAAAAAAAATA-CTGGACTAACAAGCTTCTTGTATATCTATCTCACTATCTGTATTTAGTACTCTGTATAATGAGACGGGTATCCGCCATATAGTCGTC-GGTGTATGTATTGACCGACCTAGTTTTTGTTTCGACTCTACTTTCATTGTTTCGGC-TAACTTCG-CGAATCTGTTGGTGTTTGTAAATGCCAGTTTTTCCATAAAGAAGAGCTCTGTTTGTTTCCAAAAAAAATCTTGAATTGTTGCCTNCTTTATTTGAGTCAAAAA]
[+] EMBL AK071273 [GCTGTTTCGCCGCACCCATCGAAATCTCACCCGCTCTCTCTCTCTCGCGCGCGCTGCCGCCGAGGAAGTGGAGCTACGTGGTGGAGGGGGGCGCGTCCCCAGGGAAGGCCGGGAGGGTCAGCGGGAGCGGGAGGGGGAGGGGGAGGGGTGGGGCCGCGTCGCCGATGGGTGTCACCTTCAAGGCCGTGCCGCTCCAGTCGCCGCTGCCGCCCGTCGAGGAAATAATGTCCTTCATTAGGTCATATGTTGTACCTGAAGGCTTTCCGGATAGTGTCACTCCTTCATATGTCCCATACATGACATGGAGAGCATTGAAGCATTTCTTTGGTGGAGCAATGGGTGTATTCACGACAAGAACCTTGCTAAACTCTGTTGGAGTTGCCCAAAGTAGGGCAACATCTGGAGCTGTGGCTATCAACTGGATACTCAAGGATGGAGCTGGCCGAGTTGGAAAAATGCTTTTTGCCCGCCAAGGGAAGAAATTTGACTACGACCTAAAGCAGCTTCGCTTTTCTGGCGATCTCTTGATGGAGTTAGGAGCTGGGATAGAGTTAGCTACGGCAGCTTTCCCTCAACTTTTCCTACCTATGGCTTGCATCGCAAATGTTGTTAAGAATGTTGCTGCTGTTACATCAACCTCGACCCGTACACCAATCTACAAGGCATATGCAAAAGGAGAAAATATTGGAGATGTCACTGCCAAAGGGGAAAGTGTTGGGAACATTGCTGATCTGTTGGGAACTGGTTTGAGCATTTTAATTTCTAAGAGGAATCCATCATTGGTGACTTCATTTGCCTTCTTGTCTTGTGGCTATCTCCTTAGTTCATACCATGAGGTGAGATCTGTTGTGCTGAACACTCTAAACACGGCAAGATTTACTGTGGCAGTTGATTCCTTCATTAAGAGCGGACATGTTCCCTCATTGAAGGAAGGAAACTCACAGGAGACTATATTTAATCCACCATGGCGGCATCAGCCAGTTGCAATAGGATCAAGATTTGGAGAGGCATTTCAGGAACCTGCTTCTTTTGTTGCCATAAGGCCTTTGTTTGAGGATGAGAGGTACATTGTTACATATAACCCAACAAAGGACAAGGTATATGCTTTGCTCAAGGACCAAGCAAAGCCAGATGATATTCTCAAAGCCGCTTTCCATGCACATGTATTACTACATTTTATTAATGCATCACATGCTAACTTGAATGCACGGAAGCGGATGAACTCCAATCGGTCATACCAAAATGCAAACCCACTGAACATGGACTTTATACCACACATTGCTGAATCTTG CAAGATTGTCACTTCATCATATGGAGTTTTCAAGAAGAAAGCGAGGGAACAGGGATGGATAATGTCAGAATCATTGCTTAA CCCTGGACGAGCTCGGTTGTGTGGAATAGTACCTCAATGACCCAATAATATTCGTTTGTTATAGTTGAATGGATGGTACAATTTTTTTTCATACATCGAATTCGGGCCCTATGTGAGTCAGC GAACTTCTTTAACTAAATCAACCATATCGAAGTGAAGTACCTGGCATGCACCGCGCGAGACA GGATGGATGGGTACTTCAACTTTGGAGCGATGTGCAACATCA TGGGGTATGCTGACTCATGGAAAGACGGGGAAGGAAGGAGAAACTAACCAAAAAAAATA CTGGACTAACAAGCTTCTTGTATATCTATCTCACTATCTGTATTTAGTACTCTGTATAATGAGACGGGTATCCGCCATATAGTCGTC GGTGTATGTATTGACCGACCTAGTTTTTGTTTCGACTCTACTTTCATTGTTTCGGC TAACTTCG CGAGTCTGTTGGTGTTTGTAAATGCCAGTTTTTCCATAAAGAAGAGCTCT ]
[+] EMBL C74519 [ AAGGCCGTGCCGCTCCAGTNGCCGCTGCCGCCCGTCGAGGAAATAATGTCCTTCATTAGGTCATATGTTGTACCTGAAGGCTTTCCGGATAGTGTCACTCCTTCATATGTGCCATACATGACATGGAGAGCATTGAAGCATTTCTTTGGTGGAGCAATGGGTGTATTCACGACAAGAACCTTGCTAAACTCTGTTGGAGTNGCCCAAAGTAGGGCAACATCTGGAGCTGTGGCTATCAACTGGATACTCAAGGATGGANCTGGCCGAGTTGGAAAAATGCTTTTTGCCCGCCAAGGGAAGAAATTTGACTACGACCTAAAGCAGCTTC ]
[+] EMBL CB650593 [ AGGCTTTCCTGATAGTGTCACTCCTTCATATGTCCCATACATGACATGGAGAGCATTGAAGCATTTCTTTGGTGGAGCAATGGGTGTATTCACGACAAGAACCTTGCTAAACTCTGTTGGAGTTGCCCAAAGTAGGGCAACATCTGGAGCTGTGGCTATCAACTGGATACTCAAGGATGGAGCTGGCCGAGTTGGAAAAATGCTTTTTGCCCGCCAAGGGAAGAAATTTGACTACGACCTAAAGCAGCTTCGCTTTTCTGGCGATCTCTTGATGGAGTTAGGAGCTGGGATAGAGTTAGCTACGGCAGCTTTCCCTCAACTTTTCCTACCTATGGCTTGCATCGCAAATGTTGTTAAGAATGTTGCTGCTGTTACATCAACCTCGACCCGTACACCAATCTACAAGGCATATGCAAAAGGAGAAAATATTGGAGATGTCACTGCCAAAGGAGAAAGTGTTGGGAACATTGCTGATCTGTTGGGAACTGGTTTGAGCATTTTAATTTCTAAGAGGAATCCATCATTGGTGACTTCATTTGCCTTCTTGTCTTGTGGCTATCTCCTTAGTTCATACCATGAGGTGAGATCTGTTGTGCTGAACACTCTAAACACGGCAAGATTTACTGTGGCAGTTGATTCCTTCATTAAGAGCGGACATGTTCCCTCATTGAAGGAAGGAAACTCACAGGAGACTATATTTAATCCACCATGGCGGCATCAGCCAGTTGCAATA GATCAAGATTTGGAGAGGCATTTCANGAACCTGCTTCTTTTGTTGCCATAAAGCCTTTG ]
[+] EMBL OSR31031A [ GTGTATTCACGACAAGAACCTTGCTAAACTCTGTTGGAGTTGCCCAAAGTAGGGCAACATCTGGAGCTGTGGCTATCAACTGGATACTCAAGGATGGAGCTGGCCGAGTTGGAAAAATGCTTTTTGCCCGCCAAGGGAAGAAATTTGACTACGACCTAAAGCAGCTTCGCTTTTCTGGCGATCTCTTGATGGAGTTAGGAGCTGGGATAGAGTTAGCTACGGCAGCTTTCCCTCAACTTTTCCTACCTATGGCTTGCATCGCAAATGTTGTTAAGAATGTTGCTGCTGTTACATCAACCTCGACCCGTACACCAATCTACA ]
[+] EMBL OSR15131A [ GTGTATTCACGACAAGAACCTTGCTAAACTCTGTTGGAGTTGCCCAAAGTAGGGCAACATCTGGAGCTGTGGCTATCAACTGGATACTCAAGGATGGAGCTGGCCGAGTTGGAAAAATGCTTTTTGCCCGCCAAGGGAAGAAATTTGACTACGACCTAAAGCAGCTTCGCTTTTCTGGCGATCTCTTGATGGAGTTAGGAGCTGGGATAGAGTTAGCTACGGCAGCTTTCCCTCAACTTTTCCTACCTATGGCTTGCATCGCAAATGTTGTTAAGAATGTTGCTGCTGTTACATCAACCTCGACCCGTACACCAATCTACAAGGCATATGCAAAAGGAGAAA ]
[+] EMBL CF297745 [ ACAAGGCATATGCAAAAGGAGAAAATATTGGAGATGTCACTGCCAAAGGAGAAAGTGTTGGGAACATTGCTGATCTGTTGGGAACTGGTTTGAGCATTTTAATTTCTAAGAGGAATCCATCATTGGTGACTTCATTTGCCTTCTTGTCTTGTGGCTATCTCCTTAGTTCATACCATGAGGTGAGATCTGTTGTGCTGAACACTCTAAACACGGCAAGATTTACTGTGGCAGTTGATTCCTTCATTAAGAGCGGACATGTTCCCTCATTGAAGGAAGGAAACTCACAGGAGACTATATTTAATCCACCATGGCGGCATCAGCCAGTTGCAATAGGATCAAGATTTGGAGAGGCATTTCAGGAACCTGCTTCTTTTGTTGCCATAAGGCCTTTGTTTGAGGATGAGAGGTACATTGTTACATATAACCCAACAAAGGACAAGGTATATGCTTTGCTCAAGGACTAAGCAAAGCCAGATGATATTCTCAAAGCCGCTTTCCATGCACATGTATTACTACATTTTATTAATGCATCACATGCTAACTTGAATGCACGGAAGCGGATGAACTCCAATCGGTCATACCAAAATGCAAACCCACTGAACATGGACTTTATACCACAC ]
[+] EMBL AK119214 [ TTGGGAACTGGTTTGAGCATTTTAATTTCTAAGAGGAATCCATCATTGGTGACTTCATTTGCCTTCTTGTCTTGTGGCTATCTCCTTAGTTCATACCATGAGGTGAGATCTGTTGTGCTGAACACTCTAAACACGGCAAGATTTACTGTGGCAGTTGATTCCTTCATTAAGAGCGGACATGTTCCCTCATTGAAGGAAGGAAACTCACAGGAGACTATATTTAATCCACCATGGCGGCATCAGCCAGTTGCAATAGGATCAAGATTTGGAGAGGCATTTCAGGAACCTGCTTCTTTTGTTGCCATAAGGCCTTTGTTTGAGGATGAGAGGTACATTGTTACATATAACCCAACAAAGGACAAGGTATATGCTTTGCTCAAGGACCAAGCAAAGCCAGATGATATTCTCAAAGCCGCTTTCCATGCACATGTATTACTACATTTTATTAATGCATCACATGCTAACTTGAATGCACAGAGGCGGATGAACTCCAATCGGTCATACCAAAATGCAAACCCACTGAACATGGACTTTATACCACACATTGCTGAATCTTG CAAGATTGTCACTTCATCATATGGAGTTTTCAAGAAGAAAGCGAGGGAACAGGGATGGATAATGTCAGAATCATTGCTTAA CCCTGGACGAGCTCGGTTGTGTGGAATAGTACCTCAATGACCCAATAATATTCGTTTGTTATAGTTGAATGGATGGTACAATTTTTTTTCATACATCGAATTCGGGCCCTATGTGAGTCAGC GAACTTCTTTAACTAAATCAACCATATCGAAGTGAAGTACCTGGCATGCACCGCGCGAGACA GGATGGATGGGTACTTCAACTTTGGAGCGATGTGCAACATCA TGGGGTATGCTGACTCATGGAAAGACGGGGAAGGAAGGAGAAACTAACCAAAAAAAATA CTGGACTAACAAGCTTCTTGTATATCTATCTCACTATCTGTATTTAGTACTCTGTATAATGAGACGGGTATCCGCCATATAGTCGTC GGTGTATGTATTGACCGACCTAGTTTTTGTTTCGACTCTACTTTCATTGTTTCGGC TAACTTCG CGAATCTGTTGGTGTTTGTAAATGCCAGTTTTTCCATAAAGAAGAGCTCT ]
[+] EMBL CF196639 [ GAGGAATCCATCATTGGTGACTTCATTTGCCTTCTTGTCTTGTGGCTATCTCCTTAGTTCATACCATGAGGTGAGATCTGTTGTGCTGAACACTCTAAACACGGCAAGATTTACTGTGGCAGTTGATTCCTTCATTAAGAGCGGACATGTTCCCTCATTGAAGGAAGGAAACTCACAGGAGACTATATTTAATCCACCATGGCGGCATCAGCCAGTTGCAATAGGATCAAGATTTGGAGAGGCATTTCAGGAACCTGCTTCTTTTGTTGCCATAAGGCCTTTGTTTGAGGATGAGAGGTACATTGTTACATATAACCCAACAAAGGACAAGGTATATGCTTTGCTCAAGGACCAAGCAAAGCCAGATGATATTCTCNNNGCCGCTTTCCATGCACATGTATTACTACATTTTATTAATGCATCACATGCTAACTTGAANGCNNGGAA ]
[+] EMBL CB681626 [ GAGACTATATTTAATCCACCATGGCGGCATCAGCCAGTTGCAATAGGATCAAGATTTGGAGAGGCATTTCAGGAACCTGCTTCTTTTGTTGCCATAAGGCCCTTGTTTGAGGATGAGAGGTACATTGTTACATATAACCCAACAAAGGACAAGGTATATGCTTTGCTCAAGGACCAAGCAAAGCCATATGATATTCTCAAAGCCGCTTTCCATGCACATGTATTACTACATTTTATTAATGCATCACATGCTAACTTGAATGCACGGAAGCGGATGAACTCCAATCGGTCATACCAAAATGCAAACCCACTGAACATGGACTTTATACCACACATTGCTGAATCTTG CAAGATTGTCACTTCATCATATGGAGTTTTCAAGAAGAAAGCGAGGGAACAGGGATGGATAATGTCAGAATCATTGCTTAA CCCTGGACGAGCTCGGTTGTGTGGAATAGTACCTCAATGACCCAATAATATTCGTTTGATATAGTTGAATGGATGGTACAATTTTTTTTCATACATCGAATTCGGGCCCTATGTGAGTCAGC GAACTTCTTTAACTAAATCAACCATATCGAAGTGAAGTACCTGGCATGCACCGCGCGAGACA GGATGGATGGGTACTTCAACTTTGGAGCGATGTGCAACATCA TGGGGTATGCTGACTCATGGAAAGACGGGGAAGGAAAGAGAAACTAACCAAAAAAAATA CTGGACTAACAAGCTTCTTGCATATCTATCTCACTATCTGTATTTAGGACTCTGTATAATGAGACGGGTATCCGCCATATAGTCGTC GGTGTATGTATT ]
[-] EMBL CB650594 [ AGAGGTACATTGTTACATATAACCCAACAAAGGACAAGGTATATGCTTTGCTCAAGGACCAAGCAAAGCCAGATGATATTCTCAAAGCCGCTTTCCATGCACATGTATTACTACATTTTATTAATGCATCACATGCTAACTTGAATGCACGGAAGCGGATGAACTCCAATCGGTCATACCAAAATGCAAACCCACTGAACATGGACTTTATACCACACATTGCTGAATCTTG CAAGATTGTCACTTCATCATATGGAGTTTTCAAGAAGAAAGCGAGGGAACAGGGATGGATAATGTCAGAATCATTGCTTAA CCCTGGACGAGCTCGGTTGTGTGGAATAGTACCTCAATGACCCAATAATATTCGTTTGTTATAGTTGAATGGATGGTACAATTTTTTTTCATACATCGAATTCGGGCCCTATGTGAGTCAGC GAACTTCTTTAACTAAATCAACCATATCGAAGTGAAGTACCTGGCATGCACCGCGCGAGACA GGATGGATGGGTACTTCAACTTTGGAGCGATGTGCAACATCA TGGGGTATGCTGACTCATGGAAAGACGGGGAAGGAAGGAGAAACTAACCAAAAAAAATA CTGGACTAACAAGCTTCTTGTATATCTATCTCACTATCTGTATTTAGTACTCTGTATAATGAGACGGGTATCCGCCATATAGTCGTC GGTGTATGTATTGACCGACCTAGTTTTTGTTTCGACTCTACTTTCATTGTTTCGGC TAACTTCG CGAATCTGTTGGTGTTTGTAAATGCCAGTTTTTCCATAAAGAAGAGCTCTG ]
[+] EMBL AU031396 [ GCTCAAGGACCAAGCAAAGCCAGATGATATTCTCAAAGCCGCTTTCCATGCACATGTATTACTACATTTTATTAATGCATCACATGCTAACTTGAATGCACGGAAGCGGATGAACTCCAATCGGTCATACCAAAATGCAAACCCACTGANCATGGACTTNATACCACACATTGCNGAATCTTGNCAAGATTGTCACTTCATCATATGGAGTTTTCAAGNNGAAAGCGAGGGAACAGGGATGGATAATGTCAGTATCATTGCTTAA CCCTGGACGAGCTCGGATGTGNGGAATAGTACCTCAATGn ]
[-] EMBL CB681627 [ AGATGATATTCTCAAAGCCGCTTTCCATGCACATGTATTACTACATTTTATTAATGCATCACATGCTAACTTGAATGCACGGAAGCGGATGAACTCCAATCGGTCATACCAAAATGCAAACCCACTGAACATGGACTTTATACCACACATTGCTGAATCTTG CAAGATTGTCACTTCATCATATGGAGTTTTCAAGAAGAAAGCGAGGGAACAGGGATGGATAATGTCAGAATCATTGCTTAA CCCTGGACGAGCTCGGTTGTGTGGAATAGTACCTCAATGACCCAATAATATTCGTTTGTTATAGTTGAATGGATGGTACAATTTTTTTTCATACATCGAATTCGGGCCCTATGTGAGTCAGC GAACTTCTTTAACTAAATCAACCATATCGAAGTGAAGTACCTGGCATGCACCGCGCGAGACA GGATGGATGGGTACTTCAACTTTGGAGCGATGTGCAACATCA TGGGGTATGCTGACTCATGGAAAGACGGGGAAGGAAAAAGAAACTAACCAAAAAAAATA CTGGACTAACAAGCTTCTTGTATATCTATCTCACTATCTGTATTTAGTACTCTGTATAATGAGACGGGTATCCGCCATATAGTCGTC GGTGTATGTATTGACCGACCTAGTTTTTGTTTCGACTCTACTTTCATTGTTTCGGC TAACTTCG CGAATCTGTTGGTGTTTGTAAATGCCAG GTTTCCATAAAGAAGAGCTCTGTTTGTTTCCAAAAAAAAgg ]
[-] EMBL CB639068 [ CACTTCATCATATGGAGTTTTCAAGAAGAAAGCGAGGGAACAGGGATGGATAATGTCAGAATCATTGCTTAA CCCTGGACGAGCTCGGTTGTGTGGAATAGTACCTCAATGACCCAATAATATTCGTTTGTTATAGTTGAATGGATGGTACAATTTTTTTTCATACATCGAATTCGGGCCCTATGTGAGTCAGC GAACTTCTTTAACTAAATCAACCATATCGAAGTGAAGTACCTGGCATGCACCGCGCGAGACA GGATGGATGGGTACTTCAACTTTGGAGCGATGTGCAACATCA TGGGGTATGCTGACTCATGGAAAGACGGGGAAGGAAGGAGAAACTAACCAAAAAAAATA CTGGACTAACAAGCTTCTTGTATATCTATCTCACTATCTGTATTTAGTACTCTGTATAATGAGACGGGTATCCGCCATATAGTCGTC GGTGTATGTATTGACCGACCTAGTTTTTGTTTCGACTCTACTTTCATTGTTTCGGCNTAACTTCG CGAATCTG ]
[-] EMBL CF297746 [ AGGGATGGATAATGTCAGAATCATTGCTTAA CCCTGGACGAGCTCGGTTGTGTGGAATAGTACCTCAATGACCCAATAATATTCGTTTGTTATAGTTGAATGGATGGTACAATTTTTTTTCATACATCGAATTCGGGCCCTATGTGAGTCAGC GAACTTCTTTAACTAAATCAACCATATCGAAGTGAAGTACCTGGCATGCACCGCGCGAGACA GGATGGATGGGTACTTCAACTTTGGAGCGATGTGCAACATCA TGGGGTATGCTGACTCATGGAAAGACGGGGAAGGAAGGAGAAACTAACCAAAAAAAATA CTGGACTAACAAGCTTCTTGTATATCTATCTCACTATCTGTATTTAGTACTCTGTATAATGAGACGGGTATCCGCCATATAGTCGTC GGTGTATGTATTGACCGACCTAGTTTTTGTTTCGACTCTACTTTCATTGTTTCGGC TAACTTCG CGAATCTGTTGGTGTTTGTAAATGCCAGTTTTTCCATAAAGAAGAGCTCTGTTTGTTTCCAAAAAA ]
[+] EMBL AU032001 [ cCATTGCTTAACCCCTGGACGAGCTCGGTTGTGTGGNATAGTCCCTCAATGCCCCNATAATATTCGTTTGTTATAGTTGAATGGATGGTACAATTTTTTTTCATACATCGAATTCGGGCCCTATGTGAGTCAGC GAACTTCTTTAACTAAATCAACCATATCGAAGTGAAGTNCCTGGCATGCACCGCGCGAGACA GGATGGATGGGTNCTTCAACTTTGGAGCGATGTGCAACATCA TGGGGTATGCTGACTCATGGAAAGACGGGGAAGGAAGGNGAAACTAACCAAAAAAAATA CTGGACTAACAAGCTTCTTGTATATCTATCTCACTATCTGTATTTAGTACTCTGTATAATGAGACGGGTATCCGCCATATAGTCGTC GGTGTATGTATTGACCGACCTGGTTTTTGTTTCGACTCTACTTTCATTGTTTCGGC TAACTTCG CGAATCTGTTGGTGTTTGTAAATGCCNGTTTTTCCATAAAGAAGAGCTCTGTTTGTTTCCAACTCAGTTCTTGAATTGTTGCCTNCTTTATTTGAGTCAAAAA]
[+] EMBL AU094811 [ CCCAATAATATTCGTTTGTTATAGTTGAATGGATGGTACAATTTTTTTTCATACATCGAATTCGGGCCCTATGTGAGTCAGC GAACTTCTTTAACTAAATCAACCATATCGAAGTGAAGTNCCTGGCATGCACCGCGCGAGACA GGATGGATGGGTACTTCAACTTTGGAGCGATGTGCAACATCA TGGGGTATGCTGACTCATGGAAAGACGGGGAAGGAAGGAGAAACTAACCAANNAACATA CTGGACTAACAAGCTTCTTGTATATCTATCTCACTATCTGTATTTAGTACTCTGTATAATGAGACGGGTATCCGCCATATAGTCGTC GGTGTATGTATTGACCGACNTAGTTTTTGTTTCGACTCTACTTTCATTGTTTCGGC TAACTTCG CGAATCTGTTGGTGTGTGTAAATGCCAGTTTTTCCATAAAGAAGAGCTCTGTTTGTTTCAAAAAAAAA ]
[+] EMBL AK058398 [ GTACAATTTTTTTTCATACATCGAATTCGGGCCCTATGTGAGTCAGC GAACTTCTTTAACTAAATCAACCATATCGAAGTGAAGTACCTGGCATGCACCGCGCGAGACA GGATGGATGGGTACTTCAACTTTGGAGCGATGTGCAACGTCA TGGGGTATGCTGACTCATGGAAAGACGGGGAAGGAAGGAGAAACTAACCAAAAAAAATA CTGGACTAACAAGCTTCTTGTATATCTATCTCACTATCTGTATTTAGTACTCTGTATAATGAGACGGGTATCCGCCATATAGTCGTC GGTGTATGTATTGACCGACCTAGTTTTTGTTTCGACTCTACTTTCATTGTTTCGGC TAACTTCG CGAATCTGTTGGTGTTTGTAAATGCCGGTTTTTCCATAAAGAAGAGCTCT ]
[+] EMBL AU173164 [ TATGTGAGTCAGC GAACTTCTTTAACTAAATCAACCATATCGAAGTGAAGTACCTGGCATGCACCGCGCGAGACA GGATGGATGGGTACTTCAACTTTGGAGCGATGTGCAACATCA TGGGGTATGCTGACTCATGGAAAGACGGGGAAGGAAGGAGAAACTAACCAAAAAAAATA CTGGACTAACAAGCTTCTTGTATATCTATCTCACTATCTGTATTTAGTACTCTGTATAATGAGACGGGTATCCGCCATATAGTCGTC GGTGTATGTATTGACCGACCTAGTTTTTGTTTCGACTCTACTTTCATTGTTTCGGC TAACTTCG CGAATCTGTTGGTGTTTGTAAATGCCAGTTTTTCCATAAAGAAGAGCTCTGTTTGTTTCCAACTCAGTTCTTGAATTGTTGCCTACTTTATTTGAGTCAAAAA]
[+] EMBL BE228618 [ AGTCAGCGGAACTTCTTTAACTAAATCAACCATATCGAAGTGAAGTACCTGGCATGCACCGCGCGAGACAGGGATGGATGGGTACTTCAACTTTGGAGCGATGTGCAACATCA TGGGGTATGCTGACTCATGGAAAGACGGGGAANGAAGGAGAAACTAACCAAAAAAAATA CTGGACTAACAAGCTTCTTGTATATCTATCTCACTATCTGTATTTAGTACTCTGTATAATGAGACGGGTATCCGCCATATANTCCTCNGGTGTAT TTTTGAACGACCTAATTTTTGTTTCGACTCTACTTTCATTGTTTCGGC TAACTTCGCCGAATCTGTTGGTGTTTGTAAATGCCAGTTTTTCCATAAAGAANAACTCT ]
[+] EMBL OSR04681A [ AACTTCTTTAACTAAATCAACCATATCGAAGTGAAGTACCTGGCATGCACCGCGCGAGACA GGATGGATGGGTACTTCAACTTTGGAGCGATGTGCAACATCATTGGGGTATGCTGACTCATGGAAAGACGGGGAAGGAAGGAGAAACTAACCAAAAAAAATA CTGGACTAACAAGCTTCTTGTATATCTATCTCACTATCTGTATTTAGTACTCTGTATAATGAGACGGGTATCCGCCATATAGTCGTC GGTGTATGTATTGACCGACCTAGTTTTTGTTTCGACTCTACTTTCATTGTTTCGGC TAACTTCG CGAATCTGTTGGTGTTTGTAAATGCCAGTTTTTCCATAAAGAAGAGCTCTGTTTGTT ]
[+] EMBL CB682873 [ CTGCCATGCACCGCGCGAGACA GGATGGATGGGTACTTCAACTTTGGAGCGATGTGCAACATCA TGGGGTATGCTGACTCATGGAAAGACGGGGAAGGAAGGAGAAACTAACCAAAAAAAATAGCTGGACTAACAAGCTTCTTGTATATCTATCTCACTATCTGTATTTAGTACTCTGTATAATGAGACGGGTATCCGCCATATAGTCGTC GGTGTATGTATTGACCGACCTAGTTTTTGTTTCGACTCTACTTTCATTGTTTCGGC TAACTTCG CGAATCTGTTGGTGTTTGTAAATGCCA ]
[+] EMBL CF315669 [ TATCTATCTCACTATCTGTATTTAGTACTCTGTATAATGAGACGGGTATCCGCCATATAGTCGTC GGTGTATGTATTGACCGACCTAGTTTTTGTTTCGACTCT ]
consensusID : consensus_15755#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 479 fasta sequence
[ATCCAAAGGAGAAAATATTGGAGATGTCACTCCCCAAGGGAGAAAGTGTTGGGAACCTTGCTGATCTGTTGGGAACTGGTTTGAGCCTTGTTGAATTTCTAAGAGGAATCCACTCCTTGGTGACTTCATTTCCTTCTTGTCTTGTGGCTATCTCCTTAGTTCATACCACTGAGGTGAGATCTGTTGTGCTGAACNCTCTAAACACCGGCNAGATTTACTGTGGCCGTTGATTCCTTCACTTAAGAGCGGACATGTTCCCTCATTGAAGGAAGGAAACTCACCACGGAGACTATATTTAATCCCCCATGGCGGCATCAGCCCGTTGCCATAGGATCCCAGATTTGGAGAGGCACTTTCAGGAACCTGGCTTCTTTTGTTCCATAAGCCTTTGTTTGAGGATGAGAGGTACCTTGTTACATATAACCCATAAGAACCCAGGCTGATTACCAAATAATACCGTGTATTAATTAAAAAAAAAA]
[+] EMBL BM418622 [ATCCAAAGGAGAAAATATTGGAGATGTCACTCCCCAAGGGAGAAAGTGTTGGGAACCTTGCTGATCTGTTGGGAACTGGTTTGAGCCTTGTTGAATTTCTAAGAGGAATCCACTCCTTGGTGACTTCATTTCCTTCTTGTCTTGTGGCTATCTCCTTAGTTCATACCACTGAGGTGAGATCTGTTGTGCTGAACNCTCTAAACACCGGCNAGATTTACTGTGGCCGTTGATTCCTTCACTTAAGAGCGGACATGTTCCCTCATTGAAGGAAGGAAACTCACCACGGAGACTATATTTAATCCCCCATGGCGGCATCAGCCCGTTGCCATAGGATCCCAGATTTGGAGAGGCACTTTCAGGAACCTGGCTTCTTTTGTTCCATAAGCCTTTGTTTGAGGATGAGAGGTACCTTGTTACATATAACCCATAAGAACCCAGGCTGATTACCAAATAATACCGTGTATTAATTAAAAAAAAAA]
consensusID : consensus_15755#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 250 fasta sequence
[AATACTGGANTAACAAGCTNCTTGTATATCTNTCTCACTACCTGTATTTAGTACTNTGTATAATGAGACGGGTATCCGCCATATAGTCGTCGGTGTATGTATTGNCCGACCTAGTTTTTGTTTCGACTCTACTTTCATTGTTTCGGCTAACTTCGCGAATCTGTTGGTGTTTGTAAATGCCNGTTTTTCCATAAAGAAGAGCNNTGTTTGTTTNCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU031397 [AATACTGGANTAACAAGCTNCTTGTATATCTNTCTCACTACCTGTATTTAGTACTNTGTATAATGAGACGGGTATCCGCCATATAGTCGTCGGTGTATGTATTGNCCGACCTAGTTTTTGTTTCGACTCTACTTTCATTGTTTCGGCTAACTTCGCGAATCTGTTGGTGTTTGTAAATGCCNGTTTTTCCATAAAGAAGAGCNNTGTTTGTTTNCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_15755#0 GCTGTTTCGCCGCACCCATCGAAATCTCACCCGCTCTCTCTCTCTCGCGCGCGCTGCCGC 60
consensus_15755#2 ------------------------------------------------------------
consensus_15755#1 ------------------------------------------------------------
consensus_15755#0 CGAGGAAGTGGAGCTACGTGGTGGAGGGGGGCGCGTCCCCAGGGAAGGCCGGGAGGGTCA 120
consensus_15755#2 ------------------------------------------------------------
consensus_15755#1 ------------------------------------------------------------
consensus_15755#0 GCGGGAGCGGGAGGGGGAGGGGGAGGGGTGGGGCCGCGTCGCCGATGGGTGTCACCTTCA 180
consensus_15755#2 ------------------------------------------------------------
consensus_15755#1 ------------------------------------------------------------
consensus_15755#0 AGGCCGTGCCGCTCCAGTCGCCGCTGCCGCCCGTCGAGGAAATAATGTCCTTCATTAGGT 240
consensus_15755#2 ------------------------------------------------------------
consensus_15755#1 ------------------------------------------------------------
consensus_15755#0 CATATGTTGTACCTGAAGGCTTTCCGGATAGTGTCACTCCTTCATATGTCCCATACATGA 300
consensus_15755#2 ------------------------------------------------------------
consensus_15755#1 ------------------------------------------------------------
consensus_15755#0 CATGGAGAGCATTGAAGCATTTCTTTGGTGGAGCAATGGGTGTATTCACGACAAGAACCT 360
consensus_15755#2 ------------------------------------------------------------
consensus_15755#1 ------------------------------------------------------------
consensus_15755#0 TGCTAAACTCTGTTGGAGTTGCCCAAAGTAGGGCAACATCTGGAGCTGTGGCTATCAACT 420
consensus_15755#2 ------------------------------------------------------------
consensus_15755#1 ------------------------------------------------------------
consensus_15755#0 GGATACTCAAGGATGGAGCTGGCCGAGTTGGAAAAATGCTTTTTGCCCGCCAAGGGAAGA 480
consensus_15755#2 ------------------------------------------------------------
consensus_15755#1 ------------------------------------------------------------
consensus_15755#0 AATTTGACTACGACCTAAAGCAGCTTCGCTTTTCTGGCGATCTCTTGATGGAGTTAGGAG 540
consensus_15755#2 ------------------------------------------------------------
consensus_15755#1 ------------------------------------------------------------
consensus_15755#0 CTGGGATAGAGTTAGCTACGGCAGCTTTCCCTCAACTTTTCCTACCTATGGCTTGCATCG 600
consensus_15755#2 ------------------------------------------------------------
consensus_15755#1 ------------------------------------------------------------
consensus_15755#0 CAAATGTTGTTAAGAATGTTGCTGCTGTTACATCAACCTCGACCCGTACACCAATCTACA 660
consensus_15755#2 ------------------------------------------------------------
consensus_15755#1 ------------------------------------------------------------
consensus_15755#0 AGGCATATGCAAAAGGAGAAAATATTGGAGATGTCACTGCCAAAGGAGAAAGTGTTGGGA 720
consensus_15755#2 ------------------------------------------------------------
consensus_15755#1 ------------------------------------------------------------
consensus_15755#0 ACATTGCTGATCTGTTGGGAACTGGTTTGAGCATTTTAATTTCTAAGAGGAATCCATCAT 780
consensus_15755#2 ------------------------------------------------------------
consensus_15755#1 ------------------------------------------------------------
consensus_15755#0 TGGTGACTTCATTTGCCTTCTTGTCTTGTGGCTATCTCCTTAGTTCATACCATGAGGTGA 840
consensus_15755#2 ------------------------------------------------------------
consensus_15755#1 ------------------------------------------------------------
consensus_15755#0 GATCTGTTGTGCTGAACACTCTAAACACGGCAAGATTTACTGTGGCAGTTGATTCCTTCA 900
consensus_15755#2 ------------------------------------------------------------
consensus_15755#1 ------------------------------------------------------------
consensus_15755#0 TTAAGAGCGGACATGTTCCCTCATTGAAGGAAGGAAACTCACAGGAGACTATATTTAATC 960
consensus_15755#2 ------------------------------------------------------------
consensus_15755#1 ------------------------------------------------------------
consensus_15755#0 CACCATGGCGGCATCAGCCAGTTGCAATAGGATCAAGATTTGGAGAGGCATTTCAGGAAC 1020
consensus_15755#2 ------------------------------------------------------------
consensus_15755#1 ------------------------------------------------------------
consensus_15755#0 CTGCTTCTTTTGTTGCCATAAGGCCTTTGTTTGAGGATGAGAGGTACATTGTTACATATA 1080
consensus_15755#2 ------------------------------------------------------------
consensus_15755#1 ------------------------------------------------------------
consensus_15755#0 ACCCAACAAAGGACAAGGTATATGCTTTGCTCAAGGACCAAGCAAAGCCAGATGATATTC 1140
consensus_15755#2 ------------------------------------------------------------
consensus_15755#1 ------------------------------------------------------------
consensus_15755#0 TCAAAGCCGCTTTCCATGCACATGTATTACTACATTTTATTAATGCATCACATGCTAACT 1200
consensus_15755#2 ------------------------------------------------------------
consensus_15755#1 ------------------------------------------------------------
consensus_15755#0 TGAATGCACGGAAGCGGATGAACTCCAATCGGTCATACCAAAATGCAAACCCACTGAACA 1260
consensus_15755#2 ------------------------------------------------------------
consensus_15755#1 ------------------------------------------------------------
consensus_15755#0 TGGACTTTATACCACACATTGCTGAATCTTGCAAGATTGTCACTTCATCATATGGAGTTT 1320
consensus_15755#2 ------------------------------------------------------------
consensus_15755#1 ------------------------------------------------------------
consensus_15755#0 TCAAGAAGAAAGCGAGGGAACAGGGATGGATAATGTCAGAATCATTGCTTAACCCTGGAC 1380
consensus_15755#2 ------------------------------------------------------------
consensus_15755#1 ------------------------------------------------------------
consensus_15755#0 GAGCTCGGTTGTGTGGAATAGTACCTCAATGACCCAATAATATTCGTTTGTTATAGTTGA 1440
consensus_15755#2 ------------------------------------------------------------
consensus_15755#1 ------------------------------------------------------------
consensus_15755#0 ATGGATGGTACAATTTTTTTTCATACATCGAATTCGGGCCCTATGTGAGTCAGCGAACTT 1500
consensus_15755#2 ------------------------------------------------------------
consensus_15755#1 ----------------------ATCCAAAGGAGAAAATATTGGAGATGTCACTCCCCAAG 38
consensus_15755#0 CTTTAACTAAATCAACCATATCGAAGTGAAGTACCTGGCATGCACCGCGCGAGACAGGAT 1560
consensus_15755#2 ------------------------------------------------------------
consensus_15755#1 GGAGAAAGTGTTGGGAACCTTGCTGATCTGTTGGGAACTGGTTTGAGCCTTGTTGAATTT 98
consensus_15755#0 GGATGGGTACTTCAACTTTGGAGCGATGTGCAACATCATGGGGTATGCTGACTCATGGAA 1620
consensus_15755#2 ------------------------------------------------------------
consensus_15755#1 CTAAGAGGAATCCACTCCTTGGTGACTTCATTTCCTTCTTGTCTTGTGGCTATCTCCTTA 158
consensus_15755#0 AGACGGGGAAGGAAGGAGAAACTAACCAAAAAAAATACTGGACTAACAAGCTTCTTGTA- 1679
consensus_15755#2 ---------------------------------AATACTGGANTAACAAGCTNCTTGTA- 26
consensus_15755#1 GTTCATACCACTGAGGTGAGATCTGTTGTGCTGAACNCTCTAAACACCGGCNAGATTTAC 218
** ** * ** ** * **
consensus_15755#0 TATCTATCTCACTATCTGTATTTAGTACTCTGTATAAT----------GAGACGGGTATC 1729
consensus_15755#2 TATCTNTCTCACTACCTGTATTTAGTACTNTGTATAAT----------GAGACGGGTATC 76
consensus_15755#1 TGTGGCCGTTGATTCCTTCACTTAAGAGCGGACATGTTCCCTCATTGAAGGAAGGAAACT 278
* * * * ** * *** * ** * ** ** *
consensus_15755#0 CGCCATATAGTCGTCGGTGTATGTATTGACCGACCTAGTTTTTGTTTCG--ACTCTACTT 1787
consensus_15755#2 CGCCATATAGTCGTCGGTGTATGTATTGNCCGACCTAGTTTTTGTTTCG--ACTCTACTT 134
consensus_15755#1 CACCACGGAGAC-----TATATTTAATCCCCCATGGCGGCATCAGCCCGTTGCCATAGGA 333
* *** ** * * *** ** * ** * * * ** * **
consensus_15755#0 TCATTGTTTCGGCTAA----CTTCGCGAATCTGTTGGTGTTTGTAAATGCCAGTTTTTCC 1843
consensus_15755#2 TCATTGTTTCGGCTAA----CTTCGCGAATCTGTTGGTGTTTGTAAATGCCNGTTTTTCC 190
consensus_15755#1 TCCCAGATTTGGAGAGGCACTTTCAGGAACCTGGCTTCTTTTGTTC-CATAAGCCTTTGT 392
** * ** ** * *** *** *** ***** * ***
consensus_15755#0 ATAAAGAAGAGCTCTGTTTGTTTCCAAAAAAAATCTTGAATTGTTGCCTNCTTTATTTGA 1903
consensus_15755#2 ATAAAGAAGAGCNNTGTTTGTTTNCAAAAAAAAAAAAAAAA--------AAAAAAAAAAA 242
consensus_15755#1 TTGAGGATGAGAGGTACCTTGTTACATATAACCCATAAGAACCCAGGCTGATTACCAAAT 452
* * ** *** * * ** ** * ** *
consensus_15755#0 GTCAAAAA------------------- 1911
consensus_15755#2 AAAAAAAA------------------- 250
consensus_15755#1 AATACCGTGTATTAATTAAAAAAAAAA 479
*
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||