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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 1605 cluster # 1605       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1605#0 length = 687 sequences # 2  

consensusID : consensus_1605#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 687
fasta sequence
                              [AAAGTCCCTTGAAGAGTTATCACATCCAGAATGCCCAGTCCCTGAATCCTCTCAGAACCTCTCTCCTACAGTCTCATTGGCTCCCCTTGAGATAATTGGTAATACTCCTCCCATTCTTGAACAAGTAGAATTACCTCTTGCACAGCGTAGAGAGACTAGATCCAATGCTGGTAGACCTCCTATACGTCTTGGTTTTGAGCATCTTAGTTCTATGCATGACATTGCAAACTATATCTTATATTCTCATGTTTCACTGGCATACAAAACATTCATTGCATCATTATAGACAGTGCCCATACCAAAGGATTGGAAGTGTGCAAAACAAGATCCAAGGTGGAAAGATGCAATGAGAGAAGAGTTGAATGCCCTTATGAAGAATAAGACTTGGGAGCTTGTAAAACTTCCACCAGGAAAAAAGGCAGTGGGATGTAAGTGGGTTTTTACAGTGAAGCAAACTCCTGAAGGGAAGGTGGATAGGTATAAAGCAAGATTAGTCGCAAAAGGCTACAGTCAAACATATGGAATTGACTATGATGAGACATTTGCACCGGTGGCAAAAATGGGTACAGTGAGAACTTTAGTATCTTGTGCAGTGA-ACTTTGGGTGGCCCCTCCATCAGCTTGATGTGAAAAATGCATTTCTTCATGGTGATTTATATGAGGAGGTCTACATGGAGATTCCTCCAGG]

[+] EMBL CB680524             [AAAGTCCCTTGAAGAGTTATCACATCCAGAATGCCCAGTCCCTGAATCCTCTCAGAACCTCTCTCCTACAGTCTCATTGGCTCCCCTTGAGATAATTGGTAATACTCCTCCCATTCTTGAACAAGTAGAATTACCTCTTGCACAGCGTAGAGAGACTAGATCCAATGCTGGTAGACCTCCTATACGTCTTGGTTTTGAGCATCTTAGTTCTATGCATGACATTGCAAACTATATCTTATATTCTCATGTTTCACTGGCATACAAAACATTCATTGCATCATTATAGACAGTGCCCATACCAAAGGATTGGAAGTGTGCAAAACAAGATCCAAGGTGGAAAGATGCAATGAGAGAAGAGTTGAATGCCCTTATGAAGAATAAGACTTGGGAGCTTGTAAAACTTCCACCAGGAAAAAAGGCAGTGGGATGTAAGTGGGTTTTTACAGTGAAGCAAACTCCTGAAGGGAAGGTGGATAGGTATAAAGCAAGATTAGTCGCAAAAGGCTACAGTCAAACATATGGAATTGACTATGATGAGACATTTGCACCGGTGGCAAAAATGGGTACAGTGAGAACTTTAGTATCTTGTGCAGTGA ACTTTGGGTGGCCCCTCCATCAGCTTGATGTGAAAAATGCATTTCTTCATGGTGATTTATATGAGGAGGTCTACATGGAGATTCCTCCAGG]
[+] EMBL CF328398             [                                                                                                                                                                                                                                                                                     acggcATTGACAGTGCCCATACCAAAGGATTGGAAGTGTGCAAAACAAGATCC AGGTGGAAAGATGCAATGAGAGAAGAGTTGAATGCCCTTATGAAGAATAAGACTTGGGAGCTTGTAAAACTTCCACCAGGAAAAAAGGCAGTGGGATGTAAGTGGGTTTTTACAGTGAAGCAAACTCCTGAAGGGAAGGTGGATAGGTATAAAGCAAGATTAGTCGCAAAAGGCTACAGTCAAACATATGGAATTGACTATGATGAGACATTTGCACCGGTGGCAAAAATGGGTACAGTGAGAACTTTAGTATCTTGTGCAGTGANACTTTGGGTGGCCCCTCCATCAGCTTGATGTGAAAAATGCATTTCTTCATGGT                                      ]


>consensus_1605#0 AAAGTCCCTTGAAGAGTTATCACATCCAGAATGCCCAGTCCCTGAATCCTCTCAGAACCT CTCTCCTACAGTCTCATTGGCTCCCCTTGAGATAATTGGTAATACTCCTCCCATTCTTGA ACAAGTAGAATTACCTCTTGCACAGCGTAGAGAGACTAGATCCAATGCTGGTAGACCTCC TATACGTCTTGGTTTTGAGCATCTTAGTTCTATGCATGACATTGCAAACTATATCTTATA TTCTCATGTTTCACTGGCATACAAAACATTCATTGCATCATTATAGACAGTGCCCATACC AAAGGATTGGAAGTGTGCAAAACAAGATCCAAGGTGGAAAGATGCAATGAGAGAAGAGTT GAATGCCCTTATGAAGAATAAGACTTGGGAGCTTGTAAAACTTCCACCAGGAAAAAAGGC AGTGGGATGTAAGTGGGTTTTTACAGTGAAGCAAACTCCTGAAGGGAAGGTGGATAGGTA TAAAGCAAGATTAGTCGCAAAAGGCTACAGTCAAACATATGGAATTGACTATGATGAGAC ATTTGCACCGGTGGCAAAAATGGGTACAGTGAGAACTTTAGTATCTTGTGCAGTGAACTT TGGGTGGCCCCTCCATCAGCTTGATGTGAAAAATGCATTTCTTCATGGTGATTTATATGA GGAGGTCTACATGGAGATTCCTCCAGG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)